View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8161_high_2 (Length: 363)
Name: NF8161_high_2
Description: NF8161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8161_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 300; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 41 - 344
Target Start/End: Original strand, 47706652 - 47706955
Alignment:
| Q |
41 |
cagagagtataacaccattataagaatccataaagtaaccaagttttttgagaattccagaacgcaccaaatcatcaccctctttacaagtggacaaaaa |
140 |
Q |
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| T |
47706652 |
cagagagtataacaccattacaagaatccataaagtaaccaagttttttgagaattccagaacgcaccaaatcatcaccctctttacaagtggacaaaaa |
47706751 |
T |
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| Q |
141 |
cggaagtgcaggctcccaagaaggacgacgataaccatcacgaggccttccaagatacagaaagttgcatacaaaaaaccctaattgacgataattttgg |
240 |
Q |
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| T |
47706752 |
cggaagtgcaggctcccaagaaggacgacgataaccatcacgaggccttccaagatacagaaagttgcatacaaaaaaccctaattgacgataattttgg |
47706851 |
T |
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| Q |
241 |
ccccattgagtcaaataacgacgatgaaaggaagaagtgcatataaaatggagccatcttttggacacaaggattgatttgaagacagttgatggtggta |
340 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47706852 |
ccccattgagtcaaataacgacgatgaaaggaagaagtgcatataaaatggagccatcttttggacacaaggattgatttgaagacagttgatggtggta |
47706951 |
T |
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| Q |
341 |
cacg |
344 |
Q |
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|||| |
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| T |
47706952 |
cacg |
47706955 |
T |
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