View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8161_low_21 (Length: 224)
Name: NF8161_low_21
Description: NF8161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8161_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 24 - 206
Target Start/End: Complemental strand, 47056985 - 47056803
Alignment:
| Q |
24 |
ggttttaaataagagtttatattaccacacgaaaacggtcgtgacaaaaaggtaggttatcgtttttctccgttttaatagagtgaacaaaaataacaaa |
123 |
Q |
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| T |
47056985 |
ggttttaaataagagtttatattaccacacgaaaacggtcgtgataaaaaggtaggttatcgtttttctccgttttaatagagtgaacaaaaataacaaa |
47056886 |
T |
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| Q |
124 |
aacaatagcgacaaaatgcacgtacgccatgatgaaactccgcacggccatggaaaattgagggaacaataaatgagatatta |
206 |
Q |
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|||||| |||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |
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| T |
47056885 |
aacaatggcgacaaaatacacgtacgccatgatgaaactccgtaaggccatggaaaattgagggaacaataaatgagatatta |
47056803 |
T |
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