View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8161_low_9 (Length: 300)

Name: NF8161_low_9
Description: NF8161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8161_low_9
NF8161_low_9
[»] scaffold0001 (5 HSPs)
scaffold0001 (36-97)||(438926-438987)
scaffold0001 (36-93)||(439196-439253)
scaffold0001 (36-93)||(183660-183716)
scaffold0001 (40-90)||(183367-183416)
scaffold0001 (43-90)||(183544-183592)
[»] chr2 (65 HSPs)
chr2 (36-97)||(11883923-11883984)
chr2 (1-90)||(40469691-40469780)
chr2 (1-93)||(11883623-11883715)
chr2 (36-104)||(30191222-30191290)
chr2 (39-93)||(24832331-24832385)
chr2 (1-93)||(30190923-30191015)
chr2 (36-93)||(20347461-20347518)
chr2 (39-97)||(26737781-26737839)
chr2 (36-97)||(40469423-40469484)
chr2 (39-93)||(2639482-2639536)
chr2 (41-95)||(6171154-6171207)
chr2 (39-93)||(6171456-6171510)
chr2 (39-97)||(17850974-17851032)
chr2 (39-93)||(18296693-18296747)
chr2 (36-93)||(26737482-26737537)
chr2 (39-93)||(26841587-26841641)
chr2 (39-96)||(26842238-26842295)
chr2 (37-90)||(32673141-32673193)
chr2 (39-103)||(5378651-5378715)
chr2 (36-91)||(18055050-18055103)
chr2 (39-93)||(2638820-2638874)
chr2 (36-90)||(15920781-15920835)
chr2 (39-97)||(18055316-18055374)
chr2 (39-97)||(18296072-18296130)
chr2 (39-93)||(20347163-20347217)
chr2 (39-93)||(37720204-37720258)
chr2 (41-95)||(40221311-40221364)
chr2 (39-93)||(41790912-41790966)
chr2 (36-93)||(17346032-17346088)
chr2 (40-88)||(26737657-26737706)
chr2 (40-97)||(32672838-32672895)
chr2 (94-159)||(39843277-39843341)
chr2 (36-93)||(43495309-43495366)
chr2 (36-97)||(43495602-43495662)
chr2 (41-93)||(6495723-6495775)
chr2 (39-90)||(7591204-7591255)
chr2 (39-102)||(7664673-7664736)
chr2 (39-90)||(8851151-8851202)
chr2 (36-90)||(17345736-17345788)
chr2 (39-93)||(5379959-5380013)
chr2 (39-93)||(7980003-7980056)
chr2 (39-93)||(8851582-8851636)
chr2 (39-88)||(40221488-40221538)
chr2 (39-96)||(26692820-26692877)
chr2 (40-88)||(32673020-32673069)
chr2 (40-92)||(6495468-6495519)
chr2 (41-88)||(11883751-11883799)
chr2 (39-91)||(19141446-19141497)
chr2 (41-88)||(40469607-40469655)
chr2 (37-91)||(15321394-15321446)
chr2 (39-94)||(16910826-16910881)
chr2 (36-90)||(18055169-18055224)
chr2 (39-90)||(26692399-26692450)
chr2 (36-90)||(43495481-43495535)
chr2 (41-91)||(6325349-6325399)
chr2 (39-97)||(7591850-7591908)
chr2 (39-93)||(7664248-7664302)
chr2 (40-90)||(15321515-15321565)
chr2 (52-90)||(40221586-40221624)
chr2 (40-88)||(6171334-6171383)
chr2 (40-88)||(15920912-15920961)
chr2 (36-88)||(17345859-17345912)
chr2 (40-88)||(20347341-20347390)
chr2 (40-88)||(30191051-30191100)
chr2 (41-93)||(29230282-29230334)
[»] scaffold0802 (3 HSPs)
scaffold0802 (1-95)||(1382-1476)
scaffold0802 (36-95)||(1116-1175)
scaffold0802 (40-88)||(1297-1346)
[»] chr8 (67 HSPs)
chr8 (1-95)||(43245869-43245963)
chr8 (36-97)||(37752413-37752474)
chr8 (1-95)||(41662365-41662459)
chr8 (36-95)||(16929239-16929298)
chr8 (36-97)||(12281423-12281484)
chr8 (36-93)||(15155883-15155940)
chr8 (36-93)||(16928942-16928999)
chr8 (36-93)||(43246173-43246230)
chr8 (1-91)||(765736-765826)
chr8 (1-95)||(15156147-15156241)
chr8 (39-95)||(37752082-37752138)
chr8 (1-93)||(12281124-12281216)
chr8 (36-97)||(34313761-34313820)
chr8 (39-97)||(39724048-39724106)
chr8 (36-93)||(41662107-41662164)
chr8 (40-95)||(3463946-3464001)
chr8 (39-93)||(9823361-9823415)
chr8 (39-97)||(13027281-13027339)
chr8 (39-97)||(22851386-22851444)
chr8 (39-97)||(24473339-24473397)
chr8 (41-90)||(22786843-22786892)
chr8 (41-93)||(13026635-13026687)
chr8 (36-91)||(23123514-23123567)
chr8 (36-96)||(43162231-43162290)
chr8 (37-79)||(7127666-7127708)
chr8 (39-97)||(9822744-9822802)
chr8 (39-93)||(13936723-13936776)
chr8 (36-93)||(18020085-18020140)
chr8 (39-93)||(34498555-34498609)
chr8 (39-97)||(37397145-37397203)
chr8 (39-96)||(9623499-9623556)
chr8 (36-88)||(18019915-18019968)
chr8 (39-96)||(23123335-23123392)
chr8 (39-96)||(25438789-25438846)
chr8 (39-91)||(74688-74739)
chr8 (39-95)||(34498120-34498176)
chr8 (36-71)||(74981-75016)
chr8 (43-98)||(3307333-3307388)
chr8 (38-88)||(9465700-9465751)
chr8 (36-90)||(9465871-9465923)
chr8 (39-90)||(15444647-15444698)
chr8 (39-93)||(13937389-13937443)
chr8 (39-93)||(20861638-20861692)
chr8 (39-93)||(37396708-37396762)
chr8 (40-74)||(43598756-43598790)
chr8 (42-95)||(11007561-11007613)
chr8 (40-88)||(15156062-15156111)
chr8 (36-88)||(33748157-33748212)
chr8 (36-89)||(43162536-43162588)
chr8 (39-79)||(3463654-3463694)
chr8 (41-88)||(37752242-37752290)
chr8 (41-93)||(41662521-41662573)
chr8 (43-93)||(6092777-6092825)
chr8 (40-90)||(7127923-7127973)
chr8 (44-91)||(33726696-33726743)
chr8 (39-88)||(7127827-7127877)
chr8 (40-90)||(15042148-15042198)
chr8 (39-93)||(24473768-24473822)
chr8 (43-93)||(33747984-33748033)
chr8 (40-88)||(12281252-12281301)
chr8 (42-90)||(43597803-43597849)
chr8 (53-93)||(767720-767759)
chr8 (39-91)||(15442765-15442817)
chr8 (41-73)||(22851958-22851990)
chr8 (43-94)||(39723400-39723452)
chr8 (41-88)||(41662281-41662329)
chr8 (41-88)||(43245999-43246047)
[»] scaffold0192 (2 HSPs)
scaffold0192 (1-93)||(25331-25423)
scaffold0192 (41-88)||(25247-25295)
[»] chr6 (38 HSPs)
chr6 (1-93)||(3403951-3404043)
chr6 (39-96)||(3403714-3403771)
chr6 (36-93)||(18241854-18241911)
chr6 (37-90)||(30388360-30388413)
chr6 (36-95)||(11656779-11656838)
chr6 (39-93)||(10039676-10039729)
chr6 (1-97)||(18242118-18242214)
chr6 (1-93)||(21031979-21032070)
chr6 (39-97)||(33828986-33829044)
chr6 (36-90)||(3825530-3825583)
chr6 (39-93)||(33829636-33829690)
chr6 (36-88)||(2762611-2762664)
chr6 (36-88)||(10039840-10039893)
chr6 (36-93)||(13579648-13579704)
chr6 (44-93)||(21032285-21032334)
chr6 (43-96)||(30388059-30388111)
chr6 (36-88)||(12714436-12714488)
chr6 (36-95)||(33971992-33972050)
chr6 (40-93)||(31598274-31598326)
chr6 (37-88)||(11656608-11656660)
chr6 (39-94)||(10087858-10087913)
chr6 (43-90)||(31598732-31598778)
chr6 (38-93)||(33655114-33655168)
chr6 (39-94)||(33974299-33974354)
chr6 (39-93)||(7654548-7654602)
chr6 (36-93)||(23250592-23250648)
chr6 (36-93)||(23250889-23250945)
chr6 (1-75)||(2762501-2762575)
chr6 (41-88)||(3403867-3403915)
chr6 (41-88)||(30388242-30388290)
chr6 (36-86)||(21032107-21032158)
chr6 (39-97)||(22684358-22684415)
chr6 (39-97)||(22754653-22754710)
chr6 (43-97)||(32734000-32734054)
chr6 (40-88)||(18242033-18242082)
chr6 (40-88)||(33972190-33972239)
chr6 (40-72)||(11656535-11656567)
chr6 (36-76)||(31598475-31598515)
[»] scaffold0319 (3 HSPs)
scaffold0319 (36-93)||(6394-6451)
scaffold0319 (1-94)||(6659-6751)
scaffold0319 (41-88)||(6575-6623)
[»] chr7 (71 HSPs)
chr7 (1-100)||(9412287-9412386)
chr7 (36-97)||(13772898-13772959)
chr7 (36-95)||(3687653-3687712)
chr7 (45-93)||(23686723-23686771)
chr7 (36-97)||(3687349-3687411)
chr7 (39-97)||(44599485-44599543)
chr7 (36-93)||(9412023-9412080)
chr7 (36-97)||(29291802-29291863)
chr7 (36-96)||(29292038-29292098)
chr7 (94-141)||(34152789-34152836)
chr7 (94-141)||(34174288-34174335)
chr7 (39-93)||(13772641-13772695)
chr7 (41-103)||(18925052-18925114)
chr7 (39-93)||(33628660-33628714)
chr7 (39-97)||(37888829-37888887)
chr7 (39-93)||(44600135-44600189)
chr7 (36-97)||(8953886-8953946)
chr7 (40-97)||(23686417-23686473)
chr7 (40-97)||(35079956-35080012)
chr7 (40-103)||(6908203-6908265)
chr7 (39-94)||(9035293-9035348)
chr7 (40-95)||(38191566-38191621)
chr7 (42-92)||(5735253-5735303)
chr7 (39-93)||(10533034-10533088)
chr7 (39-93)||(13863313-13863367)
chr7 (39-93)||(37889259-37889313)
chr7 (39-93)||(37972396-37972450)
chr7 (39-93)||(46816311-46816365)
chr7 (39-94)||(5349733-5349785)
chr7 (45-90)||(5735553-5735598)
chr7 (45-97)||(27096043-27096094)
chr7 (45-97)||(27182209-27182260)
chr7 (38-93)||(9034867-9034922)
chr7 (39-90)||(20418891-20418942)
chr7 (42-97)||(29293349-29293404)
chr7 (38-97)||(34235977-34236036)
chr7 (39-93)||(3205093-3205147)
chr7 (40-90)||(6908485-6908534)
chr7 (39-93)||(8643766-8643820)
chr7 (47-93)||(13863964-13864010)
chr7 (39-93)||(16198977-16199031)
chr7 (39-93)||(17156967-17157021)
chr7 (39-92)||(18925322-18925373)
chr7 (39-93)||(20419324-20419378)
chr7 (39-93)||(22740156-22740210)
chr7 (43-93)||(29292922-29292972)
chr7 (39-95)||(3204667-3204721)
chr7 (40-88)||(6908391-6908440)
chr7 (39-95)||(13741555-13741611)
chr7 (39-79)||(35080223-35080263)
chr7 (45-93)||(42418591-42418639)
chr7 (40-86)||(5735382-5735429)
chr7 (41-90)||(15567276-15567322)
chr7 (39-90)||(18863970-18864021)
chr7 (39-89)||(18925229-18925280)
chr7 (36-90)||(27096168-27096223)
chr7 (36-90)||(27182080-27182135)
chr7 (36-91)||(33628397-33628451)
chr7 (39-94)||(48359319-48359373)
chr7 (39-93)||(13744233-13744286)
chr7 (39-93)||(15566992-15567046)
chr7 (36-90)||(27096339-27096392)
chr7 (36-90)||(27181911-27181964)
chr7 (39-93)||(37971960-37972014)
chr7 (36-89)||(38191387-38191440)
chr7 (38-92)||(39983700-39983754)
chr7 (40-88)||(9412202-9412251)
chr7 (41-88)||(13772793-13772841)
chr7 (41-93)||(18864404-18864455)
chr7 (41-93)||(38826915-38826967)
chr7 (38-90)||(42419028-42419079)
[»] chr3 (62 HSPs)
chr3 (36-97)||(10293906-10293967)
chr3 (37-94)||(17372297-17372354)
chr3 (40-93)||(18874882-18874935)
chr3 (36-93)||(18875188-18875245)
chr3 (39-96)||(20969019-20969076)
chr3 (38-93)||(47871121-47871175)
chr3 (36-93)||(20968718-20968775)
chr3 (1-94)||(10293607-10293700)
chr3 (40-97)||(1927768-1927825)
chr3 (40-93)||(45060872-45060925)
chr3 (39-95)||(23630035-23630091)
chr3 (39-102)||(48160333-48160396)
chr3 (39-97)||(3644783-3644841)
chr3 (39-97)||(10348799-10348857)
chr3 (94-159)||(23091668-23091734)
chr3 (39-93)||(48159897-48159951)
chr3 (45-94)||(45060595-45060644)
chr3 (41-88)||(18875017-18875065)
chr3 (39-101)||(21895648-21895712)
chr3 (40-95)||(8314011-8314066)
chr3 (42-88)||(9026860-9026907)
chr3 (39-94)||(9027033-9027087)
chr3 (39-90)||(14015964-14016014)
chr3 (43-94)||(42627550-42627600)
chr3 (39-94)||(42672977-42673031)
chr3 (39-94)||(47666335-47666390)
chr3 (39-93)||(47870823-47870877)
chr3 (40-90)||(3644538-3644588)
chr3 (40-102)||(4947251-4947312)
chr3 (39-92)||(17372594-17372645)
chr3 (39-97)||(24485460-24485517)
chr3 (39-97)||(27238900-27238958)
chr3 (39-93)||(40848961-40849015)
chr3 (39-97)||(42673296-42673353)
chr3 (39-93)||(53687888-53687942)
chr3 (39-97)||(53766159-53766217)
chr3 (40-93)||(1101182-1101235)
chr3 (39-96)||(3353125-3353181)
chr3 (40-88)||(20968897-20968946)
chr3 (40-93)||(53766580-53766633)
chr3 (39-90)||(3644720-3644772)
chr3 (39-90)||(13657621-13657673)
chr3 (40-92)||(22429159-22429211)
chr3 (42-90)||(26007622-26007670)
chr3 (46-78)||(26540876-26540908)
chr3 (41-93)||(47665911-47665963)
chr3 (40-91)||(1100917-1100968)
chr3 (39-90)||(1928434-1928484)
chr3 (39-90)||(9026739-9026789)
chr3 (36-90)||(17372470-17372525)
chr3 (42-93)||(17441066-17441117)
chr3 (39-94)||(21896511-21896565)
chr3 (42-97)||(53688306-53688360)
chr3 (39-93)||(36180990-36181044)
chr3 (39-93)||(40848521-40848574)
chr3 (36-88)||(4947386-4947439)
chr3 (40-93)||(8315083-8315135)
chr3 (40-88)||(10293735-10293784)
chr3 (40-93)||(27238465-27238518)
chr3 (44-93)||(42455790-42455839)
chr3 (52-96)||(13657735-13657779)
chr3 (36-90)||(14015867-14015923)
[»] chr5 (56 HSPs)
chr5 (39-95)||(18433013-18433069)
chr5 (36-93)||(18433313-18433370)
chr5 (36-93)||(25175148-25175205)
chr5 (38-93)||(25116060-25116115)
chr5 (39-93)||(22429196-22429249)
chr5 (39-93)||(26020450-26020504)
chr5 (40-97)||(23011075-23011131)
chr5 (39-95)||(18817611-18817667)
chr5 (37-93)||(25115757-25115813)
chr5 (37-93)||(25174849-25174905)
chr5 (39-94)||(34577164-34577218)
chr5 (43-93)||(16466746-16466796)
chr5 (39-93)||(22428934-22428987)
chr5 (36-93)||(33324835-33324892)
chr5 (37-93)||(5187828-5187884)
chr5 (41-97)||(37780744-37780800)
chr5 (99-138)||(6753309-6753348)
chr5 (36-87)||(16726084-16726135)
chr5 (47-96)||(12441320-12441367)
chr5 (39-93)||(12498567-12498621)
chr5 (39-93)||(12498928-12498982)
chr5 (39-93)||(18816952-18817006)
chr5 (39-93)||(26571164-26571218)
chr5 (39-93)||(41383167-41383220)
chr5 (40-97)||(9665828-9665883)
chr5 (39-90)||(9665560-9665609)
chr5 (41-93)||(34147512-34147564)
chr5 (39-95)||(34576865-34576920)
chr5 (39-90)||(11351427-11351478)
chr5 (39-90)||(21207229-21207280)
chr5 (39-93)||(5187551-5187605)
chr5 (39-93)||(19514963-19515017)
chr5 (40-90)||(23011383-23011432)
chr5 (40-90)||(41382896-41382945)
chr5 (39-92)||(22729440-22729492)
chr5 (40-88)||(25115885-25115934)
chr5 (40-88)||(25174977-25175026)
chr5 (41-90)||(31569910-31569958)
chr5 (42-90)||(34576991-34577040)
chr5 (39-95)||(3888237-3888293)
chr5 (43-95)||(10098517-10098569)
chr5 (41-88)||(18433143-18433191)
chr5 (41-97)||(37610620-37610675)
chr5 (40-90)||(9869563-9869611)
chr5 (36-90)||(9869735-9869790)
chr5 (39-93)||(11350808-11350861)
chr5 (41-95)||(12441040-12441093)
chr5 (39-93)||(26570729-26570783)
chr5 (39-93)||(37610202-37610255)
chr5 (39-93)||(37780320-37780373)
chr5 (36-88)||(5187650-5187703)
chr5 (42-95)||(22729006-22729058)
chr5 (40-93)||(25940521-25940574)
chr5 (39-94)||(19514524-19514580)
chr5 (43-90)||(23011261-23011309)
chr5 (41-93)||(43464194-43464245)
[»] chr4 (71 HSPs)
chr4 (1-93)||(3930442-3930533)
chr4 (36-93)||(13198903-13198960)
chr4 (39-95)||(16555817-16555873)
chr4 (39-93)||(56505693-56505747)
chr4 (36-93)||(16555515-16555572)
chr4 (36-93)||(18077199-18077256)
chr4 (36-88)||(27304890-27304943)
chr4 (39-95)||(4239366-4239422)
chr4 (39-97)||(32703650-32703708)
chr4 (39-97)||(36096475-36096533)
chr4 (39-93)||(50678779-50678833)
chr4 (36-97)||(3930175-3930235)
chr4 (36-92)||(8181992-8182049)
chr4 (36-93)||(35393773-35393829)
chr4 (36-89)||(49178813-49178866)
chr4 (36-95)||(27304716-27304773)
chr4 (39-95)||(50679424-50679480)
chr4 (36-95)||(11241387-11241446)
chr4 (39-93)||(293217-293271)
chr4 (39-93)||(24775783-24775837)
chr4 (39-93)||(28196346-28196400)
chr4 (39-93)||(28196773-28196827)
chr4 (39-93)||(36095817-36095871)
chr4 (43-93)||(39415528-39415578)
chr4 (36-88)||(5206132-5206185)
chr4 (36-97)||(8488479-8488539)
chr4 (39-92)||(25161879-25161932)
chr4 (40-93)||(54508815-54508868)
chr4 (38-93)||(8182171-8182227)
chr4 (36-92)||(22681576-22681631)
chr4 (41-93)||(22681881-22681933)
chr4 (40-80)||(54509116-54509156)
chr4 (39-93)||(169013-169068)
chr4 (42-93)||(9380744-9380795)
chr4 (39-97)||(169439-169497)
chr4 (39-93)||(5205988-5206042)
chr4 (40-94)||(5206231-5206284)
chr4 (36-97)||(7603141-7603200)
chr4 (39-93)||(8488188-8488242)
chr4 (39-93)||(9023244-9023298)
chr4 (39-93)||(9023680-9023734)
chr4 (39-93)||(9380307-9380361)
chr4 (39-93)||(11241661-11241714)
chr4 (36-90)||(13198606-13198660)
chr4 (39-93)||(26207746-26207800)
chr4 (39-93)||(32703225-32703279)
chr4 (39-93)||(39744030-39744084)
chr4 (39-93)||(39744465-39744519)
chr4 (39-93)||(43051252-43051306)
chr4 (39-97)||(43292033-43292091)
chr4 (39-88)||(49178644-49178694)
chr4 (39-92)||(11529169-11529222)
chr4 (40-93)||(25225399-25225452)
chr4 (40-73)||(39415244-39415277)
chr4 (41-90)||(47219203-47219252)
chr4 (42-94)||(7603422-7603473)
chr4 (41-88)||(16555695-16555743)
chr4 (52-96)||(49178530-49178574)
chr4 (39-93)||(23539841-23539893)
chr4 (42-88)||(35393604-35393651)
chr4 (39-90)||(43050610-43050661)
chr4 (43-93)||(292782-292832)
chr4 (40-94)||(23540253-23540307)
chr4 (39-93)||(26207361-26207414)
chr4 (39-93)||(45830196-45830250)
chr4 (40-88)||(3930357-3930406)
chr4 (40-88)||(8488312-8488361)
chr4 (40-88)||(11241567-11241616)
chr4 (41-94)||(39086625-39086678)
chr4 (43-95)||(43292361-43292413)
chr4 (45-93)||(56506580-56506628)
[»] chr1 (65 HSPs)
chr1 (1-93)||(47955306-47955398)
chr1 (36-93)||(13589656-13589712)
chr1 (39-102)||(48190762-48190825)
chr1 (39-93)||(8108993-8109047)
chr1 (36-94)||(41082908-41082966)
chr1 (41-90)||(22149701-22149750)
chr1 (36-93)||(47955605-47955662)
chr1 (36-96)||(17518599-17518658)
chr1 (39-97)||(9347122-9347180)
chr1 (39-97)||(13918442-13918500)
chr1 (39-93)||(49284409-49284463)
chr1 (37-90)||(8108724-8108777)
chr1 (36-93)||(31848189-31848246)
chr1 (36-93)||(41083208-41083264)
chr1 (39-91)||(50526472-50526524)
chr1 (36-90)||(1176839-1176893)
chr1 (39-93)||(4692433-4692487)
chr1 (39-97)||(6002233-6002291)
chr1 (38-96)||(20371352-20371409)
chr1 (39-97)||(27172112-27172169)
chr1 (39-93)||(32163043-32163097)
chr1 (39-93)||(39692000-39692054)
chr1 (39-93)||(44911025-44911079)
chr1 (39-97)||(48105116-48105174)
chr1 (39-93)||(48191355-48191409)
chr1 (39-93)||(48313792-48313846)
chr1 (37-90)||(1177016-1177069)
chr1 (36-93)||(17518303-17518359)
chr1 (36-93)||(22149403-22149458)
chr1 (40-93)||(39690794-39690847)
chr1 (40-96)||(20480613-20480668)
chr1 (41-92)||(46056904-46056953)
chr1 (39-95)||(50430081-50430137)
chr1 (43-94)||(1176716-1176766)
chr1 (41-90)||(22149580-22149630)
chr1 (39-97)||(26814690-26814748)
chr1 (40-90)||(44911438-44911488)
chr1 (39-93)||(46824278-46824332)
chr1 (39-97)||(50615621-50615678)
chr1 (39-97)||(50623449-50623506)
chr1 (40-88)||(17518481-17518530)
chr1 (41-93)||(6703460-6703512)
chr1 (39-95)||(6703894-6703950)
chr1 (42-90)||(46823846-46823894)
chr1 (41-92)||(13918869-13918920)
chr1 (39-90)||(28634157-28634208)
chr1 (43-90)||(31847898-31847945)
chr1 (39-90)||(48104681-48104732)
chr1 (39-93)||(19008750-19008804)
chr1 (39-93)||(20480168-20480221)
chr1 (39-93)||(26815119-26815173)
chr1 (43-93)||(27172545-27172595)
chr1 (39-93)||(28633720-28633774)
chr1 (36-90)||(46057190-46057243)
chr1 (63-104)||(6912206-6912247)
chr1 (40-88)||(8108899-8108948)
chr1 (39-96)||(21687022-21687079)
chr1 (41-90)||(42611188-42611237)
chr1 (40-88)||(47955434-47955483)
chr1 (43-96)||(49318170-49318222)
chr1 (44-93)||(50615240-50615289)
chr1 (44-93)||(50623068-50623117)
chr1 (39-91)||(6002894-6002946)
chr1 (43-90)||(31848019-31848067)
chr1 (41-93)||(50429656-50429708)
[»] scaffold0376 (2 HSPs)
scaffold0376 (36-94)||(7597-7654)
scaffold0376 (39-93)||(7455-7508)
[»] scaffold0110 (3 HSPs)
scaffold0110 (1-93)||(45769-45860)
scaffold0110 (36-93)||(45537-45593)
scaffold0110 (40-88)||(45684-45733)
[»] scaffold0009 (2 HSPs)
scaffold0009 (36-93)||(205687-205743)
scaffold0009 (36-73)||(205858-205895)
[»] scaffold0015 (2 HSPs)
scaffold0015 (36-95)||(17153-17211)
scaffold0015 (36-95)||(16851-16908)
[»] scaffold0041 (1 HSPs)
scaffold0041 (39-93)||(38695-38749)
[»] scaffold0328 (2 HSPs)
scaffold0328 (39-95)||(6150-6206)
scaffold0328 (39-93)||(6795-6849)
[»] scaffold0029 (1 HSPs)
scaffold0029 (38-93)||(9905-9960)
[»] scaffold1221 (2 HSPs)
scaffold1221 (39-97)||(1507-1564)
scaffold1221 (36-90)||(1781-1834)
[»] scaffold0535 (1 HSPs)
scaffold0535 (43-93)||(10012-10062)
[»] scaffold0069 (1 HSPs)
scaffold0069 (38-96)||(50506-50563)
[»] scaffold0460 (2 HSPs)
scaffold0460 (39-96)||(763-819)
scaffold0460 (43-93)||(330-380)
[»] scaffold0002 (2 HSPs)
scaffold0002 (36-93)||(411923-411979)
scaffold0002 (48-88)||(412049-412090)
[»] scaffold0017 (1 HSPs)
scaffold0017 (39-95)||(185274-185330)
[»] scaffold0598 (2 HSPs)
scaffold0598 (41-91)||(6609-6659)
scaffold0598 (40-92)||(6877-6927)
[»] scaffold0035 (1 HSPs)
scaffold0035 (36-92)||(72967-73023)


Alignment Details
Target: scaffold0001 (Bit Score: 58; Significance: 2e-24; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 438987 - 438926
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  438987 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccaaaa 438926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 439196 - 439253
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  439196 gaggggatgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaagcc 439253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 183660 - 183716
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  183660 gagggggtgcaaa-tcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 183716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 183416 - 183367
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||| ||||||  |||||||||||||| ||||||||||||||    
T  183416 gggtgcaaaatcgtacaattgacaaaagataggggg-aaaagtgcaattaa 183367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 183544 - 183592
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaa-gatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||| | |||| ||||||||| ||||||||||||||    
T  183544 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaa 183592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 11883923 - 11883984
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11883923 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccaaaa 11883984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 40469691 - 40469780
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40469691 caaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 40469780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11883715 - 11883623
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11883715 caaaaagatgaggtgcaaaattgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 30191222 - 30191290
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaagaataat 104  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||||||    
T  30191222 gagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccaaaaaaataat 30191290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 24832385 - 24832331
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24832385 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 24832331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 30191015 - 30190923
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  30191015 caaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 30190923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 20347461 - 20347518
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  20347461 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20347518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 26737781 - 26737839
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||    
T  26737781 ggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaattaagccaaaa 26737839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 40469484 - 40469423
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||||||||||||||||||| || |||| | ||||||||||||||    
T  40469484 gagggggtgcaaaatcgcacaattagcaaaagataggagggaaaaatacaattaagccaaaa 40469423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 2639482 - 2639536
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  2639482 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 2639536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 6171207 - 6171154
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  6171207 ggtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagccaa 6171154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 6171456 - 6171510
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  6171456 ggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaagcc 6171510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 17851032 - 17850974
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||    
T  17851032 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaaa 17850974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 18296693 - 18296747
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  18296693 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18296747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 26737537 - 26737482
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  26737537 gagggggtgcaaaatcgcacaattagcaaaagataggag--aaaagtgcaattaagcc 26737482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 26841641 - 26841587
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  26841641 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 26841587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 26842238 - 26842295
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||||| ||||||||||    
T  26842238 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaagccaaa 26842295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 32673141 - 32673193
Alignment:
Q  37 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  32673141 agggggtgcaaaatcgcacaattggcaaaagata-ggggaaaaagtgcaattaa 32673193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 5378715 - 5378651
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaagaataa 103  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||||||||||||| ||| |||||    
T  5378715 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctaaaaaataa 5378651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 18055103 - 18055050
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  18055103 gagggggtgcaaaatcgcacaattagcaaaag-taggggg-aaaagtgcaattaag 18055050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 2638874 - 2638820
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||    
T  2638874 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 2638820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 15920835 - 15920781
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||||| ||||||    
T  15920835 gagggggtgcaaaatcgcacaattaacaaaagataggagggaaaagtgaaattaa 15920781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 18055316 - 18055374
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||  |||||| ||| |||||||||||||||||| ||||||    
T  18055316 ggggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaaaccaaaa 18055374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 18296130 - 18296072
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||| ||||||||| ||||    
T  18296130 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaagctaaaa 18296072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 20347217 - 20347163
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||| |||||||||    
T  20347217 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaagcc 20347163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 37720258 - 37720204
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  37720258 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37720204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 40221364 - 40221311
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  40221364 ggtgcaaaatcgaacaattagcaaaagataggggg-aaaggtgcaattaagccaa 40221311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 41790912 - 41790966
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||| |||||||||||||||| |||||| |||||||| |||||||||||||||||    
T  41790912 ggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagcc 41790966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 17346032 - 17346088
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  17346032 gaggaggtgcaaaatcgcacaattagcaaaagata-aaggaaaaagtgcaattaagcc 17346088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 26737657 - 26737706
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  26737657 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 26737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 32672895 - 32672838
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| ||||||||| ||   |||||||||||||||||||||    
T  32672895 gggtgcaaaatcgcacaattaacaaaagataaggaacaaaagtgcaattaagccaaaa 32672838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 39843341 - 39843277
Alignment:
Q  94 aaaagaataatgactttgggctcgtgaggtgagtattcatatatatatttgttttgttgagttttg 159  Q
    |||| |||||||||||||||||||  |||||||||||||||||||| ||| |||| ||||||||||    
T  39843341 aaaataataatgactttgggctcgataggtgagtattcatatatat-tttttttttttgagttttg 39843277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 43495366 - 43495309
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||| || ||||||||||||||||||||| ||||| || |||||||||||||||||    
T  43495366 gaggggatgaaaaatcgcacaattagcaaaatataggtgggaaaagtgcaattaagcc 43495309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 43495602 - 43495662
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||| |||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||    
T  43495602 gaggggatgcaaaatcgcacaattagcaaaatataggtgg-gaaagtgcaattaagccaaaa 43495662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 6495723 - 6495775
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||  |||||||||||| | |||||||||||||||||    
T  6495723 ggtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaagcc 6495775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 7591255 - 7591204
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||| ||||||||||||||  |||||| |||||||    
T  7591255 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 7664673 - 7664736
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaagaata 102  Q
    |||||||||||||||||||||  ||||  |||||| | ||||||||||||||||||||| ||||    
T  7664673 ggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagccaaaaaaata 7664736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 8851202 - 8851151
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||||||||||    
T  8851202 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 8851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 17345788 - 17345736
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||| ||| |||||||||||||||||||  ||||||||||||||    
T  17345788 gagggggtgcaaaattgcataattagcaaaagatagggg--aaaagtgcaattaa 17345736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 5379959 - 5380013
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| | |||  |||||||| |||||||||||||||||    
T  5379959 ggggtgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaagcc 5380013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 7980003 - 7980056
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||||||  ||| | ||||||||||||||||||||    
T  7980003 ggggtgcaaaatcgcacaattagcaaactata-gaggaaaaagtgcaattaagcc 7980056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 8851582 - 8851636
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  8851582 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 8851636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 40221488 - 40221538
Alignment:
Q  39 ggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  40221488 ggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagcgcaatt 40221538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 26692820 - 26692877
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    ||||||||||||||||||||| |||||  |||| ||| |||||||||||||| |||||    
T  26692820 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaaaccaaa 26692877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 32673020 - 32673069
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  32673020 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 32673069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 6495519 - 6495468
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    ||||||||||||||||||||| | |||||||||| | ||||||||||||||||    
T  6495519 gggtgcaaaatcgcacaattaac-aaagatagggaggaaaagtgcaattaagc 6495468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 11883799 - 11883751
Alignment:
Q  41 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  11883799 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 11883751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 19141497 - 19141446
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    |||||||||||| |||||||| |||||  ||||||||||||||||||||||||    
T  19141497 ggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaag 19141446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 40469607 - 40469655
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaa-gatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  40469607 ggtgcaaaatcgcacaattagcaaaacgataagggggaaaagtgcaatt 40469655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 15321446 - 15321394
Alignment:
Q  37 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    ||||| |||||||| ||||||||| |||||||||||||  |||||||||||||||    
T  15321446 aggggatgcaaaattgcacaattaacaaaagatagggg--aaaagtgcaattaag 15321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 16910881 - 16910826
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    ||||||||||||||||||||| |||||  | | |||| ||||||||||||||||||    
T  16910881 ggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaagcca 16910826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 18055224 - 18055169
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaa-gatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||||| ||||||  |||||| | ||||||||||||||    
T  18055224 gagggggtgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 18055169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 26692450 - 26692399
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  26692450 ggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaa 26692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 43495481 - 43495535
Alignment:
Q  36 gagggggtgcaaaatcgcacaatt-agcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||||| |  ||||||||||||| ||||||||||||||    
T  43495481 gagggggtgcaaaatcgcacaattgacaaaaagataggggg-aaaagtgcaattaa 43495535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 6325349 - 6325399
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    ||||||||||||||||||| |||||  ||| |||| |||||||||||||||    
T  6325349 ggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaag 6325399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 7591850 - 7591908
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||  ||||||||||| |  |||  ||||||||||||||||    
T  7591850 ggggtgcaaaatcgcacaattgacaaaagataggagtgaaagatgcaattaagccaaaa 7591908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 7664302 - 7664248
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||   |||  |||||||| |||||||||||||||||    
T  7664302 ggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcc 7664248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 15321565 - 15321515
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||| || | ||||||||||||  ||||||||||||||    
T  15321565 gggtgcaaaatcgcacagttggaaaaagataggggacaaaagtgcaattaa 15321515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 40221586 - 40221624
Alignment:
Q  52 gcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  40221586 gcacaattagcaaaagatatgaggaaaaagtgcaattaa 40221624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 6171334 - 6171383
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||| | |||||||| |||| ||||||||||||    
T  6171334 gggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaatt 6171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 15920912 - 15920961
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||| ||||||||||||||||| ||||| ||||||| ||||||||||||    
T  15920912 gggtgtaaaatcgcacaattagcaaaaagttagggggcaaaagtgcaatt 15920961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 17345912 - 17345859
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||| ||||||||||||||| | |||| |||||||| ||||||||||||    
T  17345912 gagggggtgaaaaatcgcacaattaacaaaaatatagggggcaaaagtgcaatt 17345859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 20347341 - 20347390
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||| |||||||| |||  ||||||||||||    
T  20347341 gggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaatt 20347390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 30191100 - 30191051
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||| |||||||| |||  ||||||||||||    
T  30191100 gggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaatt 30191051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 29230334 - 29230282
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||| |||||||  |||||||||| | | |||||||||||||||||    
T  29230334 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaagcc 29230282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 57; Significance: 8e-24; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1382 - 1476
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1382 caaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagccaa 1476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 1175 - 1116
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1175 gagggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaagccaa 1116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 1297 - 1346
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  1297 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 1346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 8e-24; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 43245963 - 43245869
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||| ||||||||||||||          ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43245963 caaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaagccaa 43245869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 37752413 - 37752474
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  37752413 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccaaaa 37752474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41662365 - 41662459
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  41662365 caaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccaa 41662459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 16929239 - 16929298
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  16929239 gagggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaagccaa 16929298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 12281423 - 12281484
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  12281423 gagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagccaaaa 12281484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 15155940 - 15155883
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  15155940 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 15155883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 16928999 - 16928942
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  16928999 gagggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaattaagcc 16928942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 43246173 - 43246230
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  43246173 gagggggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaagcc 43246230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 765826 - 765736
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  765826 caaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15156147 - 15156241
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||| ||||||||||||||          ||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  15156147 caaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaagccaa 15156241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 37752138 - 37752082
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  37752138 ggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagccaa 37752082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12281216 - 12281124
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||| ||||||||||||||          |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  12281216 caaaaagatggggtgcaaaatcgctcaaaaaaaaagaggaggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 12281124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 34313820 - 34313761
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  34313820 gagggggtgcaaaatcgcacaattaacaaaagatagggg--aaaagtgcaattaagccaaaa 34313761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 39724048 - 39724106
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  39724048 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaa 39724106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 41662164 - 41662107
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  41662164 gagggggtgcaaaatcgcacaattaacaaaagatatggggaaaatgtgcaattaagcc 41662107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 3463946 - 3464001
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||||||||||||    
T  3463946 gggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaagccaa 3464001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 9823361 - 9823415
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  9823361 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 9823415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 13027281 - 13027339
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||    
T  13027281 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccaaaa 13027339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 22851444 - 22851386
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||  |||||||||||||  |||||||||||||||||||||    
T  22851444 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaagccaaaa 22851386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 24473397 - 24473339
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||| ||||||| |||||  ||||||||||||||||||||||||||||||    
T  24473397 ggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaagccaaaa 24473339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 22786892 - 22786843
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  22786892 ggtgcaaaatcacacaattagtaaaagatagggggaaaaagtgcaattaa 22786843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 13026687 - 13026635
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  13026687 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 13026635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 23123514 - 23123567
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  23123514 gagggggtgcaaaatcgcacaattagcaaaagataagggg--aaagtgcaattaag 23123567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 43162290 - 43162231
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    |||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  43162290 gaggaggtgcaaaatcgcacaattaacaaaatataggggg-aaaagtgcaattaagccaaa 43162231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 7127708 - 7127666
Alignment:
Q  37 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaa 79  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  7127708 aggggatgcaaaatcgcacaattagcaaaagatagggggaaaa 7127666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 9822802 - 9822744
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||   ||||||||||||  |||||||||||||||||||||    
T  9822802 ggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaagccaaaa 9822744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 13936776 - 13936723
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||||||||||||    
T  13936776 ggggtgcaaaatcgcacaattggtaaaagataggggg-aaaagtgcaattaagcc 13936723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 18020085 - 18020140
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||||    
T  18020085 gagggggtgcaaaatcgcacaattaacaaaagata--gggtaaaagtgcaattaagcc 18020140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 34498555 - 34498609
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  34498555 ggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagcc 34498609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 37397145 - 37397203
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||| |||||||||||||||| |||||  |||||||| |||||||||||||||||||||    
T  37397145 ggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaaa 37397203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 9623556 - 9623499
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    ||||||||||||||||||||| |||||  |||| | ||||||||||||||||||||||    
T  9623556 ggggtgcaaaatcgcacaattggcaaactatagtgagaaaaagtgcaattaagccaaa 9623499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 18019968 - 18019915
Alignment:
Q  36 gagggggtgcaaaatcgcacaatta-gcaaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  18019968 gagggggtgcaaaatcgcacaattaggaaaaagatagggggcaaaagtgcaatt 18019915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 23123392 - 23123335
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    |||||| ||||||||||||||  ||||||||||| || ||||||||||||||||||||    
T  23123392 ggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagccaaa 23123335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 25438846 - 25438789
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||||||||||| ||||    
T  25438846 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagtcaaa 25438789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 74739 - 74688
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    ||||||||||||||||||||||||||||||| || || |||||||||||||||    
T  74739 ggggtgcaaaatcgcacaattagcaaaagat-ggagggaaaagtgcaattaag 74688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 34498176 - 34498120
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||||||||||||||  ||||  ||||||||||||||||||||||| ||||    
T  34498176 ggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaaaccaa 34498120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 74981 - 75016
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatag 71  Q
    ||||||||||||||||||||||||||||||||||||    
T  74981 gagggggtgcaaaatcgcacaattagcaaaagatag 75016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 3307388 - 3307333
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaag 98  Q
    |||||||||||||||||  |||||||||||||  |||| |||||||||||||||||    
T  3307388 tgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaagccaaaag 3307333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 9465751 - 9465700
Alignment:
Q  38 gggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||    
T  9465751 gggggtgcaaaatcgcacagttagcaaaaagatagggggcaaaagtgcaatt 9465700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 9465871 - 9465923
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||||||| |||||||||  |||||||| |||||||||    
T  9465871 gagggggtgcaaaatcgcacaattaacaaaagata--gggaaaaaatgcaattaa 9465923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 15444647 - 15444698
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||| | |||  |||||||||||||||||||||||    
T  15444647 ggggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaa 15444698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 13937389 - 13937443
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||| ||||||||||  ||||| |||||||| |||||||||||||||||    
T  13937389 ggggtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaagcc 13937443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 20861638 - 20861692
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||| |  ||||||||||||| ||||||||||||    
T  20861638 ggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaagcc 20861692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 37396762 - 37396708
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||  |||||  |||||||| |||||||||||||||||    
T  37396762 ggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaagcc 37396708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 43598756 - 43598790
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggg 74  Q
    |||||||||||||||||||||||||||||||||||    
T  43598756 gggtgcaaaatcgcacaattagcaaaagatagggg 43598790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 11007613 - 11007561
Alignment:
Q  42 gtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||||||||||||||||  ||||||| || |||||||||||    
T  11007613 gtgcaaaatcgcacaattagcaaaagatagcaggaaaaa-tgtaattaagccaa 11007561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 15156062 - 15156111
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  15156062 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 15156111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 33748157 - 33748212
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagc---aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||||||||   |||| |||||||| ||||||||||||    
T  33748157 gagggggtgcaaaatcgcacaattagcaaaaaaaaatagggggcaaaagtgcaatt 33748212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 43162536 - 43162588
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaatta 89  Q
    |||||||||||||||||||| |||  |||||||||||||| |||||||||||||    
T  43162536 gagggggtgcaaaatcgcacgattgacaaaagataggggg-aaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 3463694 - 3463654
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaa 79  Q
    |||||||||||| ||||||||| ||||||||||||||||||    
T  3463694 ggggtgcaaaattgcacaattaacaaaagatagggggaaaa 3463654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 37752290 - 37752242
Alignment:
Q  41 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  37752290 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 37752242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 41662573 - 41662521
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||| |||||  ||| |||| |||||||||||||||||    
T  41662573 ggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagcc 41662521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 6092825 - 6092777
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||  ||||||||||||||||||  ||||||||||||    
T  6092825 tgcaaaatcgcacaattgacaaaagatagggggaaaa--tgcaattaagcc 6092777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 7127923 - 7127973
Alignment:
Q  40 gggtgcaaaatcgcac-aattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  7127923 gggtgcaaaatcgcacaaattagcaaaagata-gggaaaaaagtgcaattaa 7127973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 33726743 - 33726696
Alignment:
Q  44 gcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    |||||||||||||||| | |||  ||||||||||||||||||||||||    
T  33726743 gcaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaag 33726696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 7127827 - 7127877
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaa-gatagggggaaaaagtgcaatt 88  Q
    ||||||||||||| | |||||||||||| ||||||||| ||||||||||||    
T  7127827 ggggtgcaaaatcacgcaattagcaaaaagatagggggtaaaagtgcaatt 7127877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 15042198 - 15042148
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||| ||||||| |||||||||| ||||  |||||||||||||    
T  15042198 gggtgcaaaatcacacaattggcaaaagataaggggggaaagtgcaattaa 15042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 24473768 - 24473822
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  ||||||   |||||||||||||||||    
T  24473768 ggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaagcc 24473822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 33748033 - 33747984
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||| ||||||||||||||||||  || ||||||||||||||||||    
T  33748033 tgcaaaatcacacaattagcaaaagata-tggaaaaaagtgcaattaagcc 33747984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 12281301 - 12281252
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||| ||||| |||||||| |||| ||||||||||||    
T  12281301 gggtgcaaaatcgcacagttagcaaaaagataaggggcaaaagtgcaatt 12281252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 43597849 - 43597803
Alignment:
Q  42 gtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||||| ||||  || |||||||||||||||    
T  43597849 gtgcaaaatcgcacaattagcaaacgata--ggaaaaaagtgcaattaa 43597803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 767720 - 767759
Alignment:
Q  53 cacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  767720 cacaattaacaaaagataggggg-aaaagtgcaattaagcc 767759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 15442817 - 15442765
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    ||||||||||||| ||||||| || ||| |||||||| |||| ||||||||||    
T  15442817 ggggtgcaaaatcacacaattggcgaaatataggggggaaaaatgcaattaag 15442765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 22851958 - 22851990
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagataggg 73  Q
    ||||||||||||||||||| |||||||||||||    
T  22851958 ggtgcaaaatcgcacaattggcaaaagataggg 22851990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 39723452 - 39723400
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatag-ggggaaaaagtgcaattaagcca 94  Q
    ||||||||||||||||| ||||||||||| || |||||| | |||||||||||    
T  39723452 tgcaaaatcgcacaattggcaaaagatagaggtgaaaaattacaattaagcca 39723400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 41662281 - 41662329
Alignment:
Q  41 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||| ||||||||||||||||| |||||||| |||| ||||||||||||    
T  41662281 ggtgtaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 41662329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 43246047 - 43245999
Alignment:
Q  41 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| ||||    
T  43246047 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgtaatt 43245999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25331 - 25423
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25331 caaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 25423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 25247 - 25295
Alignment:
Q  41 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  25247 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 25295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 3403951 - 3404043
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3403951 caaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3404043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 3403771 - 3403714
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3403771 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccaaa 3403714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 18241911 - 18241854
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  18241911 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 18241854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 30388360 - 30388413
Alignment:
Q  37 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30388360 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtacaattaa 30388413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 11656779 - 11656838
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  11656779 gagggggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaagccaa 11656838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 10039729 - 10039676
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10039729 ggggtgcaaaatcgcacaattagcaaaagataggggg-aaaagtgcaattaagcc 10039676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18242118 - 18242214
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||||||||    
T  18242118 caaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggaaaaaaaatgcaattaagccaaaa 18242214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 21032070 - 21031979
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  21032070 caaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagttaggggg-aaaagtgcaattaagcc 21031979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 33829044 - 33828986
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  33829044 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaa 33828986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 3825583 - 3825530
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  3825583 gagggggtgcaaaatcgcacaattagcaaaatataggggg-aaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 33829636 - 33829690
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  33829636 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33829690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 2762664 - 2762611
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  2762664 gagggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 2762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 10039840 - 10039893
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  10039840 gagggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 10039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 13579648 - 13579704
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  13579648 gagggggtgcaaaatcgcacaattagcaaacgatagggag-aaaagtgcaattaagcc 13579704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 21032285 - 21032334
Alignment:
Q  44 gcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  21032285 gcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 21032334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 30388111 - 30388059
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  30388111 tgcaaaatcgcacaattagcaaaagataggggg-gaaagtgcaattaagccaaa 30388059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 12714488 - 12714436
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaatt 88  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  12714488 gaggggctgcaaaatcgcacaattaacaaaagatagggggcaaaagtgcaatt 12714436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 33972050 - 33971992
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||||||||||    
T  33972050 gagggggtgcaaaatcgtacaattaacaaaagata-ggggaaaaactgcaattaagccaa 33971992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 31598274 - 31598326
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  31598274 gggtgcaaaatcgcacaattagcaaaagatagagggaaaaa-tacaattaagcc 31598326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 11656660 - 11656608
Alignment:
Q  37 agggggtgcaaaatcgcacaattagcaaaa-gatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  11656660 agggggtgcaaaatcgcacaattatcaaaacgatagggggcaaaagtgcaatt 11656608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 10087858 - 10087913
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    ||||||||||||||||||||| |||||  | |||||| ||||||||||||||||||    
T  10087858 ggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaagcca 10087913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 31598732 - 31598778
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  31598732 tgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaa 31598778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 33655114 - 33655168
Alignment:
Q  38 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||| ||||||||||||||||||| |||| | |||||||||||||||    
T  33655114 gggggtgcaaaattgcacaattagcaaaagataagggg-acaagtgcaattaagcc 33655168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 33974299 - 33974354
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    ||||||||||||||||||||| |||||  |||||||| |||| |||||||||||||    
T  33974299 ggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcca 33974354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 7654548 - 7654602
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  7654548 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 7654602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 23250648 - 23250592
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||| ||| |||||||  ||||||||| ||||||||||||||||||||||    
T  23250648 gagggggtgcaagatctcacaattgacaaaagata-ggggaaaaagtgcaattaagcc 23250592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 23250889 - 23250945
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||| |||| ||||||||||||||||||||| ||| |||||||||||| |||||    
T  23250889 gagggggtacaaattcgcacaattagcaaaagata-gggcaaaaagtgcaatcaagcc 23250945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2762575 - 2762501
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagataggggg 75  Q
    |||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||| || |||||    
T  2762575 caaaaagatgaggtgcaaaatcactcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaaaattggggg 2762501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 3403867 - 3403915
Alignment:
Q  41 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  3403867 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 3403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 30388242 - 30388290
Alignment:
Q  41 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  30388242 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 30388290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 21032158 - 21032107
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaa-aagatagggggaaaaagtgcaa 86  Q
    ||||||||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  21032158 gagggggtgcaaaatcgcacaattgacaagaagatagggggcaaaagtgcaa 21032107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 22684358 - 22684415
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||| ||||||| |||||  ||| |||| |||||||||||||||||||||    
T  22684358 ggggtgcaaaatcacacaattggcaaactataagggg-aaaagtgcaattaagccaaaa 22684415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 22754710 - 22754653
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||| ||||||| |||||  ||| |||||||| |||||||||||||||||    
T  22754710 ggggtgcaaaatcacacaattggcaaactataaggggaaaa-gtgcaattaagccaaaa 22754653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 32734000 - 32734054
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||| |||||  |||||| | |||||||||||||| ||||||    
T  32734000 tgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaaaccaaaa 32734054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 18242033 - 18242082
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||| | |||||||| |||| ||||||||||||    
T  18242033 gggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaatt 18242082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 33972190 - 33972239
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||| |||||||||| |||||||| |||| ||||||||||||    
T  33972190 gggtgcaaaatctcacaattagcaaaaagatatggggcaaaagtgcaatt 33972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 11656567 - 11656535
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagg 72  Q
    ||||||||||||||| |||||||||||||||||    
T  11656567 gggtgcaaaatcgcataattagcaaaagatagg 11656535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 31598515 - 31598475
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagataggggga 76  Q
    ||||||||| ||||||||||| |||||||||||| ||||||    
T  31598515 gagggggtgaaaaatcgcacagttagcaaaagatgggggga 31598475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 6451 - 6394
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6451 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 6394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6659 - 6751
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6659 caaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggg-aaaagtgcaattaagcca 6751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 6575 - 6623
Alignment:
Q  41 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  6575 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 6623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 9412287 - 9412386
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaagaa 100  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||    
T  9412287 caaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctaaagaa 9412386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 13772898 - 13772959
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  13772898 gagggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagccaaaa 13772959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 3687653 - 3687712
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  3687653 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccaa 3687712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 23686723 - 23686771
Alignment:
Q  45 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23686723 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 23686771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 3687411 - 3687349
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatag-ggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||    
T  3687411 gagggggtgcaaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaagccaaaa 3687349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 44599543 - 44599485
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  44599543 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaa 44599485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 9412080 - 9412023
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  9412080 gagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcc 9412023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 29291863 - 29291802
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||| |||||    
T  29291863 gagggggtgcaaaatcgcataattatcaaaagatagggagaaaaagtgcaattaagtcaaaa 29291802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 29292038 - 29292098
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    ||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  29292038 gagggggtggaaaatcgcacaattagcaaaagttagaggaaaaaagtgcaattaagccaaa 29292098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 34152789 - 34152836
Alignment:
Q  94 aaaagaataatgactttgggctcgtgaggtgagtattcatatatatat 141  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34152789 aaaagaataatgactttgggctcgtgaggtgagtatttatatatatat 34152836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 34174335 - 34174288
Alignment:
Q  94 aaaagaataatgactttgggctcgtgaggtgagtattcatatatatat 141  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34174335 aaaagaataatgactttgggctcgtgaggtgagtatttatatatatat 34174288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 13772695 - 13772641
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  13772695 ggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagcc 13772641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 18925114 - 18925052
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaagaataa 103  Q
    |||||||||| ||||||||||||||||||||||   ||||||||||||||||||||| |||||    
T  18925114 ggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagccaaaaaaataa 18925052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 33628660 - 33628714
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  33628660 ggggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatttagcc 33628714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 37888887 - 37888829
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||    
T  37888887 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaaa 37888829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 44600135 - 44600189
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  44600135 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44600189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 8953886 - 8953946
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||| ||||    
T  8953886 gagggggtgcaaaattgcacaattaacaaaagataggggg-aaaagtgcaattaagcaaaaa 8953946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 23686473 - 23686417
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  23686473 gggtgcaaaattgtacaattagcaaaagataggggg-aaaagtgcaattaagccaaaa 23686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 35080012 - 35079956
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||    
T  35080012 gggtgcaaaaccccacaattagcaaaagataggggg-aaaagtgcaattaagccaaaa 35079956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 6908265 - 6908203
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaagaataa 103  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||||||||||||| ||| |||||    
T  6908265 gggtgcaaaatcgcacaattaacaatagataggggg-aaaagtgcaattaagcctaaaaaataa 6908203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 9035293 - 9035348
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||||||||||||||    
T  9035293 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcca 9035348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 38191566 - 38191621
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||    
T  38191566 gggtgcaaaatcgcataattaacaaaagataggggtaaaaaatgcaattaagccaa 38191621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 5735303 - 5735253
Alignment:
Q  42 gtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||    
T  5735303 gtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaagc 5735253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 10533088 - 10533034
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  10533088 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 10533034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 13863367 - 13863313
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||    
T  13863367 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 13863313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 37889259 - 37889313
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  37889259 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37889313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 37972396 - 37972450
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  37972396 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37972450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 46816311 - 46816365
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||| |||| | ||||||||| |||||||||||||||||||||    
T  46816311 ggggtgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaagcc 46816365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 5349733 - 5349785
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    |||||||||||||||||||||| |||||||||||||   |||||||||||||||||    
T  5349733 ggggtgcaaaatcgcacaattaacaaaagatagggg---aaagtgcaattaagcca 5349785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 5735553 - 5735598
Alignment:
Q  45 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  5735553 caaaatcgcacaattaataaaagatagggggaaaaagtgcaattaa 5735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 27096094 - 27096043
Alignment:
Q  45 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  27096094 caaaatcgcacaattagcaaaatataggggg-gaaagtgcaattaagccaaaa 27096043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 27182209 - 27182260
Alignment:
Q  45 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  27182209 caaaatcgcacaattagcaaaatataggggg-gaaagtgcaattaagccaaaa 27182260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 9034922 - 9034867
Alignment:
Q  38 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||| |||||||||||| |||||  |||||||| |||||||||||||||||    
T  9034922 gggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagcc 9034867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 20418942 - 20418891
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||||||||||    
T  20418942 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 20418891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 29293349 - 29293404
Alignment:
Q  42 gtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||| |||||  |||||||| |||| ||||||||||||||||    
T  29293349 gtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagccaaaa 29293404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 34235977 - 34236036
Alignment:
Q  38 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||||||||||||||||  || |||| | |||||||| |||||    
T  34235977 gggggtgcaaaatcgcacaattagcaaaagatagaagggaaaaatacaattaagtcaaaa 34236036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 3205093 - 3205147
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  3205093 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 3205147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 6908485 - 6908534
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||||||||| ||||||||  |||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaataggggg-gaaagtgcaattaa 6908534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 8643766 - 8643820
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| | |||||||||||   |||||||||||||||||    
T  8643766 ggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaagcc 8643820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 13863964 - 13864010
Alignment:
Q  47 aaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||    
T  13863964 aaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 13864010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 16198977 - 16199031
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||  |||||||||||||||||||||    
T  16198977 ggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcc 16199031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 17157021 - 17156967
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  17157021 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 17156967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 18925322 - 18925373
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    |||||||||||||||||||||||||||| |||| ||  ||||||||||||||||    
T  18925322 ggggtgcaaaatcgcacaattagcaaaatatagagg--aaaagtgcaattaagc 18925373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 20419324 - 20419378
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  20419324 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 20419378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 22740210 - 22740156
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  22740210 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 22740156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 29292972 - 29292922
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  29292972 tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 29292922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 3204721 - 3204667
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||||||| |||||  ||||||||  ||||||||||||||||||    
T  3204721 ggggtgcaaaatcgcacaattggcaaactataggggg--aaagtgcaattaagccaa 3204667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 6908391 - 6908440
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  6908391 gggtgcaaaatcgcacaattagcaaaaagatagggggtaaaagcgcaatt 6908440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 13741611 - 13741555
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||||||| | |||  |||||||| |||| ||||||||||||||    
T  13741611 ggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaagccaa 13741555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 35080223 - 35080263
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaa 79  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  35080223 ggggtgcaaaatcgcacaattaacaaaagataaggggaaaa 35080263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 42418639 - 42418591
Alignment:
Q  45 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  |||||||| ||||||| |||||||||    
T  42418639 caaaatcgcacaattagcaaactataggggggaaaagtgaaattaagcc 42418591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 5735429 - 5735382
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaa 86  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||||    
T  5735429 gggtgcaaaatcgcacaattggcaaaaagatagggagaaaaagtgcaa 5735382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 15567276 - 15567322
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||   ||||||||||||||||| ||||||||||||||    
T  15567276 ggtgcaaaatcgcac---tagcaaaagataggggggaaaagtgcaattaa 15567322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 18864021 - 18863970
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||||||||||    
T  18864021 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 18925229 - 18925280
Alignment:
Q  39 ggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatta 89  Q
    ||||||||||||||||||||| || ||||||||||||| |||||| ||||||    
T  18925229 ggggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagttcaatta 18925280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 27096223 - 27096168
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaa-gatagggggaaaaagtgcaattaa 90  Q
    |||||| ||||||||||||||||| | |||| ||||||||| ||||||||||||||    
T  27096223 gaggggttgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaa 27096168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 27182080 - 27182135
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaa-gatagggggaaaaagtgcaattaa 90  Q
    |||||| ||||||||||||||||| | |||| ||||||||| ||||||||||||||    
T  27182080 gaggggttgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaa 27182135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 33628451 - 33628397
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    |||||| |||||||| ||||||||||||||||||| || | |||||||||||||||    
T  33628451 gaggggatgcaaaattgcacaattagcaaaagataaggag-aaaagtgcaattaag 33628397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 48359373 - 48359319
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||||||||||||||    
T  48359373 ggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagcca 48359319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 13744233 - 13744286
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  13744233 ggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagcc 13744286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 15567046 - 15566992
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||||||  | ||| | |||| ||||||||||||    
T  15567046 ggggtgcaaaatcgcacaattagcaaaaagtggggagcaaaaatgcaattaagcc 15566992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 27096339 - 27096392
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||| ||||||||| |||||||  |||||||||||||| ||||||||||||||    
T  27096339 gaggggatgcaaaatcacacaattgacaaaagataggggg-aaaagtgcaattaa 27096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 27181964 - 27181911
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||| ||||||||| |||||||  |||||||||||||| ||||||||||||||    
T  27181964 gaggggatgcaaaatcacacaattgacaaaagataggggg-aaaagtgcaattaa 27181911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 37972014 - 37971960
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  | |||||  |||||||||||||||||    
T  37972014 ggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaagcc 37971960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 38191440 - 38191387
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatta 89  Q
    |||| ||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  38191440 gaggaggtgcaaaatcgcacaattggcaaaaagata-ggggaaaaagtgcaatta 38191387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 39983754 - 39983700
Alignment:
Q  38 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    |||||||| |||||||| |||||  |||||||| |||| ||||||||||||||||    
T  39983754 gggggtgcgaaatcgcataattaataaaagataagggggaaaagtgcaattaagc 39983700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 9412202 - 9412251
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||| ||||| |||||||| |||| ||||||||||||    
T  9412202 gggtgcaaaatcgcacagttagcaaaaagataaggggcaaaagtgcaatt 9412251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 13772793 - 13772841
Alignment:
Q  41 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| ||||    
T  13772793 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgtaatt 13772841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 18864404 - 18864455
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||| |||||  |||||||| |||||| ||||||||||    
T  18864404 ggtgcaaaatcgcacaattggcaaactataggggg-aaaagtacaattaagcc 18864455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 38826915 - 38826967
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||  ||||  |||||||| |||| ||||||||||||    
T  38826915 ggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 38826967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 42419028 - 42419079
Alignment:
Q  38 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||| ||||||||| |||||  |||||||| ||||||||||||||    
T  42419028 gggggtgcaaaaacgcacaattggcaaactataggggg-aaaagtgcaattaa 42419079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 10293906 - 10293967
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  10293906 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccaaaa 10293967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 17372354 - 17372297
Alignment:
Q  37 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  17372354 agggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaagcca 17372297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 18874935 - 18874882
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattgagcc 18874882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 18875188 - 18875245
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  18875188 gagggggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaagcc 18875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 20969019 - 20969076
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  20969019 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccaaa 20969076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 47871121 - 47871175
Alignment:
Q  38 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47871121 gggggtgcaaaatcgcacaattagcaaaagataggggg-aaaagtgcaattaagcc 47871175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 20968775 - 20968718
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  20968775 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaggtgcaattaagcc 20968718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10293700 - 10293607
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    |||||||||| ||||||||||||||          ||||||||||||||||||||||||  ||||||||||||| ||||| |||||||||||||    
T  10293700 caaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgcaattaagcca 10293607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 1927825 - 1927768
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||    
T  1927825 gggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaagccaaaa 1927768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 45060872 - 45060925
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||||||||    
T  45060872 gggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagcc 45060925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 23630035 - 23630091
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||    
T  23630035 ggggtgcaaaatcgcacaattaccaaaaaataggaggaaaaagtgcaattaaaccaa 23630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 48160333 - 48160396
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaagaata 102  Q
    ||||||||||||||||||||| |||||  ||||||||  |||||||||||||||||||| ||||    
T  48160333 ggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaagccaaaaaaata 48160396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 3644783 - 3644841
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| ||||||||||||||||    
T  3644783 ggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaagccaaaa 3644841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 10348799 - 10348857
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||||||||    
T  10348799 ggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaagccaaaa 10348857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 23091668 - 23091734
Alignment:
Q  94 aaaagaataatgactttgggctcgtgaggtgagtattcatatatatat-ttgttttgttgagttttg 159  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||| || |||| ||||||||||    
T  23091668 aaaataataatgactttgggctcgataggtgagtattcatatatatatattttttttttgagttttg 23091734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 48159951 - 48159897
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  48159951 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 48159897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 45060644 - 45060595
Alignment:
Q  45 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  45060644 caaaatcgcataattagcaaaagatagtggggaaaagtgcaattaagcca 45060595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 18875065 - 18875017
Alignment:
Q  41 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  18875065 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 18875017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 21895712 - 21895648
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatag-ggggaaaaagtgcaattaagcc-aaaagaat 101  Q
    ||||||||||||| ||||||| |||||| |||| |||||||||||||||||||||| ||||||||    
T  21895712 ggggtgcaaaatcacacaattggcaaaacatagtggggaaaaagtgcaattaagcctaaaagaat 21895648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 8314066 - 8314011
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||||||  ||||| |||||||  |||||||||||||||||||    
T  8314066 gggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaagccaa 8314011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 9026907 - 9026860
Alignment:
Q  42 gtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  9026907 gtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 9026860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 9027033 - 9027087
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||| ||||||||||    
T  9027033 ggggtgtaaaattgcacaattagcaaaagataggggg-aaaagtgaaattaagcca 9027087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 14015964 - 14016014
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  14015964 ggggtgcaaaatcgcacaattagcaaaagataggatg-aaaagtgcaattaa 14016014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 42627550 - 42627600
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    ||||||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  42627550 tgcaaaatcacacaattagcaaaagatagaggg-aaaagtgcaattaagcca 42627600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 42673031 - 42672977
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||||||||||||||    
T  42673031 ggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcca 42672977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 47666335 - 47666390
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    |||||||||||| |||||||| |||||  |||||||| ||||||||||||||||||    
T  47666335 ggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcca 47666390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 47870877 - 47870823
Alignment:
Q  39 ggggtgcaaaat-cgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  47870877 ggggtgcaaaattcgcataattagcaaaagatagggg-aaaaagtgcaattaagcc 47870823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 3644588 - 3644538
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||  ||||||||||||||||||| | ||||||||||||||||    
T  3644588 gggtgcaaaattacacaattagcaaaagatagagagaaaaagtgcaattaa 3644538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 4947312 - 4947251
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaagaata 102  Q
    ||||||||||||||||||||| ||||| |||||||  |||||||||||| |||||||| ||||    
T  4947312 gggtgcaaaatcgcacaattaacaaaaaataggggtgaaaagtgcaatt-agccaaaataata 4947251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 17372594 - 17372645
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    ||||||||||||||||||||||| |||| |||||||  ||||||||||||||||    
T  17372594 ggggtgcaaaatcgcacaattagtaaaatatagggg--aaaagtgcaattaagc 17372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 24485460 - 24485517
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| |||||  |||||| | |||||||||||||||||||||    
T  24485460 ggggtgcaaaatcgcacaattggcaaactatagggag-aaaagtgcaattaagccaaaa 24485517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 27238900 - 27238958
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| |||||  |||| ||| |||||||||||||| ||||||    
T  27238900 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaaaccaaaa 27238958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 40848961 - 40849015
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||| ||| |||||||||||||||||    
T  40848961 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagcc 40849015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 42673296 - 42673353
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||||||    
T  42673296 ggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagccaaaa 42673353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 53687942 - 53687888
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  53687942 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 53687888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 53766217 - 53766159
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||  ||||  ||||| ||||||||||||||||| ||||||    
T  53766217 ggggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaaaccaaaa 53766159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 1101182 - 1101235
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||| ||||||||||||  ||||||||||| |||| |||||||||||||||||    
T  1101182 gggtgaaaaatcgcacaaaaagcaaaagataagggggaaaagtgcaattaagcc 1101235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 3353181 - 3353125
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||||||||||||||||    
T  3353181 ggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagccaaa 3353125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 20968897 - 20968946
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaa-gatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  20968897 gggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaatt 20968946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 53766580 - 53766633
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||| |||||||| |||||  |||||||| |||||||||||||||||    
T  53766580 gggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaagcc 53766633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 3644720 - 3644772
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaa-aagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||||||| | ||||| ||| ||||||||||||||    
T  3644720 ggggtgcaaaatcgcacaattagcaagaggatagagggcaaaagtgcaattaa 3644772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 13657621 - 13657673
Alignment:
Q  39 ggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||| || ||||||||||||  ||||||||||||||    
T  13657621 ggggtgcaaaatcgcacaattggcaaaaagataggggacaaaagtgcaattaa 13657673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 22429211 - 22429159
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    ||||||||| |||||||||| |||||| |||||||  ||||||||||||||||    
T  22429211 gggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaagc 22429159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 26007622 - 26007670
Alignment:
Q  42 gtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||| |||||| |||||  |||||||||||||||||||||||    
T  26007622 gtgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaattaa 26007670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 26540876 - 26540908
Alignment:
Q  46 aaaatcgcacaattagcaaaagatagggggaaa 78  Q
    |||||||||||||||||||||||||||||||||    
T  26540876 aaaatcgcacaattagcaaaagatagggggaaa 26540908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 47665963 - 47665911
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||  ||||  ||| ||||||||||||||||||||||    
T  47665963 ggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagcc 47665911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 1100968 - 1100917
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    ||||| |||||||||||||| ||||||||||||| | | |||||||||||||    
T  1100968 gggtgaaaaatcgcacaatttgcaaaagatagggtggataagtgcaattaag 1100917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 1928434 - 1928484
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||| ||||||||||||| | |||| |||||||||    
T  1928434 ggggtgcaaaatcgcacaattggcaaaagatagggaggaaaa-tgcaattaa 1928484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 9026789 - 9026739
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||| ||||||||| ||||||||||| ||||||| |||||||||    
T  9026789 ggggtgcaaaattgcacaattaacaaaagataggaggaaaaa-tgcaattaa 9026739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 17372470 - 17372525
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||||| || ||||||||||| | |||||||| |||||    
T  17372470 gagggggtgcaaaatcgcacaattggcaaaaagatagggtgcaaaagtgccattaa 17372525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 17441066 - 17441117
Alignment:
Q  42 gtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||| |||||||||| | | |||| ||||||||||||    
T  17441066 gtgcaaaatcgcacaattaacaaaagatagagaggaaaaatgcaattaagcc 17441117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 21896511 - 21896565
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    |||||||||||||||||||||  ||||| ||| ||||||||| |||||||||||||    
T  21896511 ggggtgcaaaatcgcacaattgacaaaatata-ggggaaaaaatgcaattaagcca 21896565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 53688306 - 53688360
Alignment:
Q  42 gtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||| |||||  ||||||| | ||||||||||||||||||||    
T  53688306 gtgcaaaatcgcacaattggcaaactatagggg-agaaagtgcaattaagccaaaa 53688360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 36180990 - 36181044
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||| |||||||||||||||| ||||  |||||| | |||||||||||||||||    
T  36180990 ggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagcc 36181044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 40848574 - 40848521
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||| |||||||||||||| |||||  |||||||| |||||||||||||||||    
T  40848574 ggggtgtaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 40848521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 4947439 - 4947386
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||| |||||||||||||||||| || ||||||||| ||| ||||||||||||    
T  4947439 gagggagtgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaatt 4947386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 8315083 - 8315135
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||  ||||| ||||||||  ||||||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatataggggg-gaaagtgcaattaagcc 8315135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 10293784 - 10293735
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||| | |||||||| |||| ||||||||||||    
T  10293784 gggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaatt 10293735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 27238518 - 27238465
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||| |||||  ||||| || |||||| ||||||||||    
T  27238518 gggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaagcc 27238465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 42455839 - 42455790
Alignment:
Q  44 gcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  42455839 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 42455790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 13657735 - 13657779
Alignment:
Q  52 gcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    ||||||||||||||||||| | |  ||||||||||||||||||||    
T  13657735 gcacaattagcaaaagatatgagagaaaagtgcaattaagccaaa 13657779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 14015867 - 14015923
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagc-aaaagata-gggggaaaaagtgcaattaa 90  Q
    ||||| |||||||||||||||||| || |||||||| ||||| ||||||||||||||    
T  14015867 gagggagtgcaaaatcgcacaattggcaaaaagataggggggcaaaagtgcaattaa 14015923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 18433069 - 18433013
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18433069 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccaa 18433013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 18433313 - 18433370
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  18433313 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 18433370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 25175148 - 25175205
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  25175148 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 25175205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 25116060 - 25116115
Alignment:
Q  38 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  25116060 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 25116115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 22429196 - 22429249
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22429196 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaa-tgcaattaagcc 22429249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 26020504 - 26020450
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  26020504 ggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcc 26020450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 23011131 - 23011075
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  23011131 gggtgcaaaatcgcacaattagcaaaagataaggggaaaaa-tgcaattaagccaaaa 23011075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 18817611 - 18817667
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  18817611 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaa 18817667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 25115813 - 25115757
Alignment:
Q  37 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  25115813 agggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcc 25115757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 25174905 - 25174849
Alignment:
Q  37 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  25174905 agggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcc 25174849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 34577164 - 34577218
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  34577164 ggggtgcaaaatcacacaattagcaaaagata-ggggaaaaagtgcaattaagcca 34577218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 16466746 - 16466796
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 16466796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 22428987 - 22428934
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  22428987 ggggtgcaaaatcgcacaattagcaaaagataggggg-gaaagtgcaattaagcc 22428934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 33324835 - 33324892
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||| |||||||  ||||||||||||| ||||||||||||||||||    
T  33324835 gagggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagcc 33324892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 5187828 - 5187884
Alignment:
Q  37 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||| ||||||||| ||||||||| |||| |||||||||||||||||    
T  5187828 agggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagcc 5187884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 37780744 - 37780800
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||||||  |||||||| |||||| ||||||||||||||    
T  37780744 ggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagccaaaa 37780800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 6753309 - 6753348
Alignment:
Q  99 aataatgactttgggctcgtgaggtgagtattcatatata 138  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6753309 aataatgactttgggctcgtgaggtgagtattcatatata 6753348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 16726135 - 16726084
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaat 87  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  16726135 gaggaggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 12441320 - 12441367
Alignment:
Q  47 aaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  12441320 aaatcgcacaattagcaaaagatagggg--aaaagtgcaattaagccaaa 12441367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 12498621 - 12498567
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  12498621 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 12498567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 12498928 - 12498982
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  12498928 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 12498982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 18817006 - 18816952
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||    
T  18817006 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 18816952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 26571164 - 26571218
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  26571164 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 26571218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 41383167 - 41383220
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||||||||    
T  41383167 ggggtgcaaaatcgcacaattagcaaaaaataggggg-aaaagttcaattaagcc 41383220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 9665828 - 9665883
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||    
T  9665828 gggtgcaaaat-gcacaattagcaaaagataggggg-aaaagtggaattaagccaaaa 9665883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 9665609 - 9665560
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  9665609 ggggtgcaaaattgcacaattagcaaaagatagggg--aaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 34147512 - 34147564
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||  ||||  ||||||||||||||||||||||||||    
T  34147512 ggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcc 34147564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 34576920 - 34576865
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||| ||||    
T  34576920 ggggtgtaaaatcgcacaattagcaaaagataggggg-gaaagtgcaattaaaccaa 34576865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 11351427 - 11351478
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||| |||||||||||| |  ||||||||||||||    
T  11351427 ggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaa 11351478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 21207280 - 21207229
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||||||||||    
T  21207280 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 21207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 5187605 - 5187551
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||| |||||||||| ||||||| ||| ||| ||||||||||    
T  5187605 ggggtgcaaaatcgcacgattagcaaaaaataggggaaaagagtacaattaagcc 5187551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 19514963 - 19515017
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  19514963 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 19515017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 23011383 - 23011432
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||||||||    
T  23011383 gggtgcaaaatcgcacaattaacaaaagata-agggaaaaagtgcaattaa 23011432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 41382945 - 41382896
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  41382945 gggtgcaaaatcgcacaattaacaaaagataggggggaaaa-tgcaattaa 41382896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 22729440 - 22729492
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||||||||||||    
T  22729440 ggggtgcaaaatcgcacaattggcaaattataggggg-aaaagtgcaattaagc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 25115934 - 25115885
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaa-gatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  25115934 gggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaatt 25115885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 25175026 - 25174977
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaa-gatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  25175026 gggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaatt 25174977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 31569958 - 31569910
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  31569958 ggtgcaaaatcgcacaattgacaaaagataggggg-aaaagtgcaattaa 31569910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 34577040 - 34576991
Alignment:
Q  42 gtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  34577040 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaa 34576991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 3888293 - 3888237
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||||||| |||||| |||||  |||||||| ||| |||||||||||||||    
T  3888293 ggggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaattaagccaa 3888237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 10098569 - 10098517
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||||||||||  ||||  ||||| ||||||||||||||||||||||    
T  10098569 tgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaagccaa 10098517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 18433191 - 18433143
Alignment:
Q  41 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  18433191 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 18433143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 37610620 - 37610675
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||||||  ||||||||  ||||| ||||||||||||||    
T  37610620 ggtgcaaaatcgcacaattagcaaactataggggg-gaaagtacaattaagccaaaa 37610675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 9869611 - 9869563
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  9869611 gggtgcaaaatcgcacaattagcaaa--atagggaggaaaagtgcaattaa 9869563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 9869735 - 9869790
Alignment:
Q  36 gagggggtgcaaaatcgcacaattag-caaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||||| |  |||||| |||||| ||||||||||||||    
T  9869735 gagggggtgcaaaatcgcacaattggtaaaaagacagggggcaaaagtgcaattaa 9869790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 11350861 - 11350808
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||| |||||||| ||||||||||||||  |||| ||||||||||||    
T  11350861 ggggtgcaaaat-gcacaattggcaaaagataggggtgaaaaatgcaattaagcc 11350808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 12441093 - 12441040
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||| |||||||||  |||||||| ||| ||||||||||||||||||||    
T  12441093 ggtgcaaaattgcacaattaataaaagata-gggaaaaaagtgcaattaagccaa 12441040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 26570783 - 26570729
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||| |||||||||    
T  26570783 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaagcc 26570729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 37610255 - 37610202
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||| ||||||| |||||  |||||||| |||||||||||||||||    
T  37610255 ggggtgcaaaatcacacaattggcaaactataggggg-aaaagtgcaattaagcc 37610202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 37780373 - 37780320
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||| ||||||| |||||  |||||||| |||||||||||||||||    
T  37780373 ggggtgcaaaatcacacaattggcaaactataggggg-aaaagtgcaattaagcc 37780320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 5187703 - 5187650
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||| |||||||||| ||||||| ||||||||||||  ||||||||||||    
T  5187703 gagggggtacaaaatcgcataattagcaaaaagataggggacaaaagtgcaatt 5187650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 22729058 - 22729006
Alignment:
Q  42 gtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||||  ||||  |||||||| |||||||||||||||||||    
T  22729058 gtgcaaaatcgcacaatttacaaactataggggg-aaaagtgcaattaagccaa 22729006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 25940574 - 25940521
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||  ||||  ||||||| ||||| ||||||||||||    
T  25940574 gggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaagcc 25940521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 19514580 - 19514524
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagata-gggggaaaaagtgcaattaagcca 94  Q
    ||||||||||||||||||||| |||||  ||| |||||  |||||||||||||||||    
T  19514580 ggggtgcaaaatcgcacaattggcaaactataggggggggaaagtgcaattaagcca 19514524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 23011261 - 23011309
Alignment:
Q  43 tgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||| || ||||||||||||| |||| |||||||||    
T  23011261 tgcaaaatcgcacaattggctaaaagatagggggcaaaattgcaattaa 23011309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 43464194 - 43464245
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  43464194 ggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagcc 43464245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 3930442 - 3930533
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3930442 caaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggg-aaaagtgcaattaagcc 3930533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 13198903 - 13198960
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  13198903 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 13198960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 16555817 - 16555873
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  16555817 ggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaagccaa 16555873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 56505747 - 56505693
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  56505747 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 56505693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 16555572 - 16555515
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  16555572 gagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcc 16555515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 18077199 - 18077256
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  18077199 gagggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcc 18077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 27304890 - 27304943
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27304890 gagggggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtgcaatt 27304943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 4239366 - 4239422
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  4239366 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagccaa 4239422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 32703650 - 32703708
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||    
T  32703650 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaaa 32703708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 36096475 - 36096533
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||    
T  36096475 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccaaaa 36096533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 50678833 - 50678779
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  50678833 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 50678779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 3930235 - 3930175
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||| |||||  |||||||| ||||||||||||||||||||||||||    
T  3930235 gagggggtgcaaaatcgcataattaataaaagata-ggggaaaaagtgcaattaagccaaaa 3930175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 8182049 - 8181992
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaa-gatagggggaaaaagtgcaattaagc 92  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  8182049 gagggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagc 8181992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 35393773 - 35393829
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||    
T  35393773 gagggggtgcaaattcgcacaattagcaaaagatagggtg-aaaagtgcaattaagcc 35393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 49178813 - 49178866
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaatta 89  Q
    |||||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  49178813 gagggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 27304773 - 27304716
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||    
T  27304773 gagggggtgcaaaatcgcacaattagcagaagatagggg--aaaagggcaattaagccaa 27304716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 50679424 - 50679480
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||||||| |||||| ||||||||||||||  |||||||||||||||||||    
T  50679424 ggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaagccaa 50679480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 11241446 - 11241387
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||| |||||||||||||||||| ||||||||| || | |||||||||||||||||||    
T  11241446 gaggggatgcaaaatcgcacaattaacaaaagataaggaggaaaagtgcaattaagccaa 11241387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 293217 - 293271
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  ||||||||||||||||||||||||||    
T  293217 ggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcc 293271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 24775783 - 24775837
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||||||||| || |||||||||||||||||    
T  24775783 ggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcc 24775837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 28196400 - 28196346
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  28196400 ggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagcc 28196346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 28196773 - 28196827
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  28196773 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 28196827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 36095871 - 36095817
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||    
T  36095871 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 36095817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 39415528 - 39415578
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||| |||||||||||||||||||| ||||||||||||| |||||||    
T  39415528 tgcaaaattgcacaattagcaaaagatagagggaaaaagtgcagttaagcc 39415578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 5206132 - 5206185
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  5206132 gagggagtgcaaaatcgcacaattagcaaaaagatagggggaagaagtgcaatt 5206185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 8488479 - 8488539
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||||||| |||||||| || | |||||||||||||||| ||||    
T  8488479 gagggggtgcaaaatcgcacaattagaaaaagataaggcg-aaaagtgcaattaagcgaaaa 8488539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 25161932 - 25161879
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||||||||||||    
T  25161932 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 54508868 - 54508815
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||| ||||||| ||||||||| || ||||||||||||||||||||    
T  54508868 gggtgcaaaatcacacaattggcaaaagattggaggaaaaagtgcaattaagcc 54508815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 8182171 - 8182227
Alignment:
Q  38 gggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||| |||| |||||||  |||||||||||||||||    
T  8182171 gggggtgcaaaatcgcacaattagcaaaaaaataggggtgaaaagtgcaattaagcc 8182227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 22681631 - 22681576
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    ||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||    
T  22681631 gagggggtgcaaaatcgcacaattgacaaaagataggggg-gaaagtgcaattaagc 22681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 22681881 - 22681933
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||| ||||||||| ||||||||||| || |||||||||||||||||    
T  22681881 ggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaagcc 22681933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 54509116 - 54509156
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaa 80  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  54509116 gggtgcaaaatcgcacaattagcaaaaaatagggggaaaaa 54509156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 169068 - 169013
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagataggggga-aaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  ||||||||| |||||||||||||||||    
T  169068 ggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaagcc 169013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 9380744 - 9380795
Alignment:
Q  42 gtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  9380744 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9380795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 169439 - 169497
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||  ||||  |||||||| |||| ||||||||||||||||    
T  169439 ggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagccaaaa 169497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 5206042 - 5205988
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||  ||||| |||||||||||| | |||||||||||||||||    
T  5206042 ggggtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaagcc 5205988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 5206231 - 5206284
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    |||||||||||||||||||||  |||||||| |||| ||||||||||||||||||    
T  5206231 gggtgcaaaatcgcacaattaa-aaaagataagggggaaaagtgcaattaagcca 5206284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 7603200 - 7603141
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||| |||||||||  ||||||||||||  |||||||||||||||| ||||    
T  7603200 gagggggtgcaaaattgcacaattaaaaaaagatagggg--aaaagtgcaattaagcaaaaa 7603141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 8488242 - 8488188
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||| ||||||||| ||  ||||| ||||||||||||    
T  8488242 ggggtgcaaaatcgcacaattaacaaaagatatggaaaaaaaatgcaattaagcc 8488188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 9023298 - 9023244
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||  |||||||||||||||||    
T  9023298 ggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagcc 9023244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 9023680 - 9023734
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  9023680 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 9023734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 9380361 - 9380307
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||| |||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  9380361 ggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 11241661 - 11241714
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||| ||||||||||    
T  11241661 ggggtgcaaaatcccacaattggcaaaagataggggg-aaaagtacaattaagcc 11241714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 13198660 - 13198606
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||||| ||||||||||  ||  ||||||||||||||    
T  13198660 gagggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgcaattaa 13198606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 26207746 - 26207800
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||| |||| ||||||||||||    
T  26207746 ggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 26207800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 32703279 - 32703225
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||| |||||||||||| |||||  |||||||| |||||||||||||||||    
T  32703279 ggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaagcc 32703225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 39744084 - 39744030
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||| |||||||||||||| | |||  ||||||||||||||||||||||||||    
T  39744084 ggggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaagcc 39744030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 39744465 - 39744519
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  39744465 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 39744519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 43051252 - 43051306
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||| ||||||| ||||||||||||||  |||| ||||||||||||    
T  43051252 ggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaagcc 43051306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 43292091 - 43292033
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||  ||||  ||||||| ||||||||||||||||| ||||    
T  43292091 ggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaagcaaaaa 43292033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 49178694 - 49178644
Alignment:
Q  39 ggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||| || ||||||||||||| ||||||||||||    
T  49178694 ggggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagtgcaatt 49178644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 11529222 - 11529169
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    ||||||||||||| ||||||| ||||||| ||||| | ||||||||||||||||    
T  11529222 ggggtgcaaaatcacacaattggcaaaagttagggaggaaaagtgcaattaagc 11529169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 25225399 - 25225452
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||| |||||||||||| |  | |||||||||||||||    
T  25225399 gggtgcaaaatcgcacaattggcaaaagataggagacagaagtgcaattaagcc 25225452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 39415277 - 39415244
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagataggg 73  Q
    ||||||||||||||||||||||||||||||||||    
T  39415277 gggtgcaaaatcgcacaattagcaaaagataggg 39415244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 47219203 - 47219252
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||||||||||||| ||  |||| |||||||||    
T  47219203 ggtgcaaaatcgcacaattagcaaaagatagaggtgaaaaatgcaattaa 47219252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 7603422 - 7603473
Alignment:
Q  42 gtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    ||||||||||||||||||   |||||||||||| |||||||||||||||||||    
T  7603422 gtgcaaaatcgcacaattgtaaaaagatagggg-aaaaagtgcaattaagcca 7603473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 16555695 - 16555743
Alignment:
Q  41 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  16555695 ggtgcaaaatcgcacaattagcaaaaagataagggggaaaagtgcaatt 16555743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 49178574 - 49178530
Alignment:
Q  52 gcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||    
T  49178574 gcacaattagcaaaagatatgggagaaaagtgcaattaagccaaa 49178530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 23539893 - 23539841
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  ||||||||  ||||||||||||||||    
T  23539893 ggggtgcaaaatcgcacaattggcaaactataggggg--aaagtgcaattaagcc 23539841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 35393651 - 35393604
Alignment:
Q  42 gtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  35393651 gtgcaaaatcgcacaattagcaaaaagatagggggcaaaagttcaatt 35393604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 43050661 - 43050610
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||| | |||||||||||   ||||||||||||||    
T  43050661 ggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaa 43050610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 292832 - 292782
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||| |||||||| |||||  |||||||| |||||||||||||||||    
T  292832 tgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcc 292782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 23540253 - 23540307
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    ||||||||||||||||||||  ||||  |||||||  ||||||||||||||||||    
T  23540253 gggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaagcca 23540307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 26207414 - 26207361
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  ||||||||  ||||||||||||||||    
T  26207414 ggggtgcaaaatcgcacaattggcaaactataggggg-gaaagtgcaattaagcc 26207361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 45830196 - 45830250
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||| ||||||||||||||  |||||||||||||  |||||||| ||||||||    
T  45830196 ggggtgtaaaatcgcacaattgacaaaagataggggtgaaaagtgcgattaagcc 45830250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 3930357 - 3930406
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||| |||||||| |||  ||||||||||||    
T  3930357 gggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaatt 3930406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 8488361 - 8488312
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||| ||||||||||| |||| |||||||| ||||||||||||    
T  8488361 gggtgcaaaattgcacaattagcaaaaacatagggggcaaaagtgcaatt 8488312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 11241567 - 11241616
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||| ||||    
T  11241567 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgaaatt 11241616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 39086625 - 39086678
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    ||||||||||||||||||| |||||  ||| |||  ||||||||||||||||||    
T  39086625 ggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaagcca 39086678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 43292361 - 43292413
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||| |||||  | |||||| |||| ||||||||||||||    
T  43292361 tgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaattaagccaa 43292413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 56506580 - 56506628
Alignment:
Q  45 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||| |||||||| |||||||||| |||  |||||||||||||||||    
T  56506580 caaaattgcacaattggcaaaagataagggtgaaaagtgcaattaagcc 56506628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 47955398 - 47955306
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  47955398 caaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 47955306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 13589656 - 13589712
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13589656 gagggggtgcaaaatcgcacaattagcaaaagataggggg-aaaagtgcaattaagcc 13589712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 48190825 - 48190762
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaagaata 102  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||    
T  48190825 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaaaaata 48190762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 8108993 - 8109047
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  8108993 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 8109047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 41082966 - 41082908
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  41082966 gaggggatgcaaaatcgcacaattggcaaaagatagggggaaaaagtacaattaagcca 41082908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 22149701 - 22149750
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22149701 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 22149750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 47955605 - 47955662
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  47955605 gagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagcc 47955662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 17518599 - 17518658
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||    
T  17518599 gagggggtgcaaaatcgcacaattggcaaaagataggggg-aaaagtgcaattaagtcaaa 17518658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 9347180 - 9347122
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||    
T  9347180 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaaa 9347122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 13918500 - 13918442
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| |||||  ||||| ||||||||||||||||||||||||    
T  13918500 ggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaagccaaaa 13918442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 49284463 - 49284409
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  49284463 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 49284409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 8108777 - 8108724
Alignment:
Q  37 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  8108777 agggggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaattaa 8108724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 31848189 - 31848246
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||| ||||||| |||||||||||||  |||||||||||||||||    
T  31848189 gagggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaagcc 31848246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 41083208 - 41083264
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||| || |||||||||||||| |||||||||||||||||    
T  41083208 gagggggtgcaaaatcgcacaactaacaaaagataggggg-aaaagtgcaattaagcc 41083264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 50526472 - 50526524
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  50526472 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 1176893 - 1176839
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||| ||||||||  |||||||||||||| ||||||||||||||    
T  1176893 gagggggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaa 1176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 4692433 - 4692487
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||| |||||||| |||||  ||||||||||||||||||||||||||    
T  4692433 ggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4692487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 6002291 - 6002233
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||||||||||||    
T  6002291 ggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagccaaaa 6002233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 20371352 - 20371409
Alignment:
Q  38 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    |||||||||||||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  20371352 gggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagccaaa 20371409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 27172169 - 27172112
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||    
T  27172169 ggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagccaaaa 27172112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 32163043 - 32163097
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  32163043 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 32163097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 39692000 - 39692054
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  39692000 ggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaagcc 39692054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 44911079 - 44911025
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||    
T  44911079 ggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagcc 44911025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 48105116 - 48105174
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||||||||||| |||||  ||| |||| |||||||||||||||||||||    
T  48105116 ggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaagccaaaa 48105174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 48191355 - 48191409
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||    
T  48191355 ggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagcc 48191409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 48313792 - 48313846
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||| |||||||||||||||||||  |||||||||| ||||||||||    
T  48313792 ggggtgcaaaattgcacaattagcaaaagataatgggaaaaagtacaattaagcc 48313846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 1177016 - 1177069
Alignment:
Q  37 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||| ||||||||||| |||||||||| | ||||||||||||||    
T  1177016 agggggtgcaaaattgcacaattagcgaaagatagggaggaaaagtgcaattaa 1177069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 17518359 - 17518303
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||    
T  17518359 gagggggtgcaaaatcgcacaattaacaaaagataagggg-aaaggtgcaattaagcc 17518303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 22149458 - 22149403
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  22149458 gagggggtgcaaaatcgcacaatta-ccaaagataggggg-aaaagtgcaattaagcc 22149403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 39690847 - 39690794
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||| ||||||    
T  39690847 gggtgcaaaatcgcacaattggccaaatatagggggaaaaagtgcaactaagcc 39690794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 20480613 - 20480668
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    |||||||||||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  20480613 gggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagccaaa 20480668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 46056953 - 46056904
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  46056953 ggtgcaaaatcgcaaaattagcaaaagataggggg--aaagtgcaattaagc 46056904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 50430081 - 50430137
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||| ||||    
T  50430081 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaaccaa 50430137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 1176766 - 1176716
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||||    
T  1176766 tgcaaaatcgcacaattagcaaaatataggggg-gaaagtgcaattaagcca 1176716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 22149580 - 22149630
Alignment:
Q  41 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  22149580 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaa 22149630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 26814748 - 26814690
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||  ||||  |||||| | |||||||||||||||||||||    
T  26814748 ggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagccaaaa 26814690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 44911438 - 44911488
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||| |||||  ||||||||||||| |||||||||    
T  44911438 gggtgcaaaatcgcacaattggcaaactatagggggaaaaaatgcaattaa 44911488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 46824278 - 46824332
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||| |||||||| |||||  ||||| ||||||||||||||||||||    
T  46824278 ggggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaagcc 46824332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 50615621 - 50615678
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||||||    
T  50615621 ggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagccaaaa 50615678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 50623449 - 50623506
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||||||    
T  50623449 ggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagccaaaa 50623506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 17518481 - 17518530
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  17518481 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 17518530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 6703512 - 6703460
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||| | |||  ||||| ||||||||||||||||||||    
T  6703512 ggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaattaagcc 6703460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 6703894 - 6703950
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||||||||| |||||||| |||||  |||||||  |||||||||||||||||||    
T  6703894 ggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaagccaa 6703950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 46823894 - 46823846
Alignment:
Q  42 gtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||| |||||  |||||||| ||||||||||||||    
T  46823894 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 46823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 13918869 - 13918920
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    ||||||||||||||||||| |||||  |||||| | ||||||||||||||||    
T  13918869 ggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagc 13918920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 28634157 - 28634208
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||||||||||    
T  28634157 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 28634208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 31847945 - 31847898
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||| ||||||||||||||||||| ||||  |||||||||||||    
T  31847945 tgcaaaattgcacaattagcaaaagataagggggtaaagtgcaattaa 31847898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 48104732 - 48104681
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||||||||||    
T  48104732 ggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaa 48104681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 19008750 - 19008804
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||   |||  |||||||| |||||||||||||||||    
T  19008750 ggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgcaattaagcc 19008804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 20480221 - 20480168
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  20480221 ggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagcc 20480168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 26815119 - 26815173
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||   |||  |||||||| |||||||||||||||||    
T  26815119 ggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcc 26815173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 27172545 - 27172595
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||| |||||  | |||||| |||||||||||||||||    
T  27172545 tgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaagcc 27172595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 28633774 - 28633720
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||| |||||| |||||  ||| |||| |||||||||||||||||    
T  28633774 ggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaagcc 28633720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 46057190 - 46057243
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||| || |||||| ||| ||||||||||||||| |||||||||||||||||||    
T  46057190 gagggagttcaaaattgcataattagcaaaagata-ggggaaaaagtgcaattaa 46057243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 6912247 - 6912206
Alignment:
Q  63 aaaagatagggggaaaaagtgcaattaagccaaaagaataat 104  Q
    ||||||||||||  ||||||||||||||||||||| ||||||    
T  6912247 aaaagataggggccaaaagtgcaattaagccaaaataataat 6912206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 8108899 - 8108948
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||| ||||||||||||||||| |||||||| |||| ||||||||||||    
T  8108899 gggtgtaaaatcgcacaattagcaaaaagatatggggcaaaagtgcaatt 8108948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 21687079 - 21687022
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    ||||||||||||  |||||||  ||||  |||||||| ||||||||||||||||||||    
T  21687079 ggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaagccaaa 21687022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 42611237 - 42611188
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||||| |||||  ||| |||| ||||||||||||||    
T  42611237 ggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 42611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 47955483 - 47955434
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||| |||||||| |||  ||||||||||||    
T  47955483 gggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaatt 47955434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 49318170 - 49318222
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    ||||||||||||||||| |||||  ||||||||  |||||||||||||||||||    
T  49318170 tgcaaaatcgcacaattggcaaactataggggg-gaaagtgcaattaagccaaa 49318222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 50615289 - 50615240
Alignment:
Q  44 gcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 50615240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 50623117 - 50623068
Alignment:
Q  44 gcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 50623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 6002894 - 6002946
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    |||||||||||||||||||||   |||||||||||   |||||||||||||||    
T  6002894 ggggtgcaaaatcgcacaattgcgaaaagatagggatgaaaagtgcaattaag 6002946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 31848067 - 31848019
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaa-gatagggggaaaaagtgcaattaa 90  Q
    ||||||||||||||||| |||||| ||||| ||| ||||||||||||||    
T  31848067 tgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattaa 31848019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 50429708 - 50429656
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||||  |||  ||| |||||| ||||||||||    
T  50429708 ggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaagcc 50429656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 7597 - 7654
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcca 94  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7597 gagggggtacaaaatcgcacaattagcaaaagata-ggggaaaaagtgcaattaagcca 7654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 7508 - 7455
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  7508 ggggtgcaaaatcgcataattagcaaaagata-ggggaaaaagtgcaattaagcc 7455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 45769 - 45860
Alignment:
Q  1 caaaaagatgaggtgcaaaatcgctnnnnnnnnnngagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||| ||||||||||||||          |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  45769 caaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggg-aaaagtgcaattaagcc 45860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 45593 - 45537
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  45593 gagggagtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcc 45537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 45684 - 45733
Alignment:
Q  40 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||||||| |||||||| |||  ||||||||||||    
T  45684 gggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaatt 45733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 205743 - 205687
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  205743 gagggggtgcaaaatcgcacaattagcaaaagatagggagaaaaa-tgcaattaagcc 205687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 205858 - 205895
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagataggg 73  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  205858 gagggggtgcaaaattgcacaattagcaaaatataggg 205895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 17153 - 17211
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  17153 gaggcggtgcaaaattgcacaattagcaaaagataggggg-aaaagtgcaattaagccaa 17211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 16908 - 16851
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  16908 gagggggtgcataatcgcacaattagcaaaagata-ggggaaaaag-gcaattaagccaa 16851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 38695 - 38749
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  38695 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 38749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 6206 - 6150
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    |||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  6206 ggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaagccaa 6150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 6795 - 6849
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||    
T  6795 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 9960 - 9905
Alignment:
Q  38 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||| |||||||||||||| |||||  ||||||||||||||||||||||||||    
T  9960 gggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 9905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 1564 - 1507
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaaa 97  Q
    ||||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||    
T  1564 ggggtgcaaaatcacacaattggcaaaagata-gaggaaaaagtgcaattaagccaaaa 1507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 1781 - 1834
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 90  Q
    |||| |||||||||||||||||| | |||||||||||||| ||||||||||||||    
T  1781 gaggaggtgcaaaatcgcacaataaacaaaagataggggg-aaaagtgcaattaa 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 10062 - 10012
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||||||||    
T  10062 tgcaaaatcgtacaattggcaaaagatagggggcaaaagtgcaattaagcc 10012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 50506 - 50563
Alignment:
Q  38 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    |||||||||||||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  50506 gggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagccaaa 50563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 763 - 819
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaaa 96  Q
    ||||||||||||||||||||| |||||  ||| |||||||||||||||||||||||||    
T  763 ggggtgcaaaatcgcacaattggcaaactata-ggggaaaaagtgcaattaagccaaa 819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 380 - 330
Alignment:
Q  43 tgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    |||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  380 tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 411979 - 411923
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 93  Q
    ||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||    
T  411979 gagggggtgcaaaatcgcacaattgacaaaagataggggg-taaagtgcaattaagcc 411923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 412090 - 412049
Alignment:
Q  48 aatcgcacaattagcaaaa-gatagggggaaaaagtgcaatt 88  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  412090 aatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 412049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 185274 - 185330
Alignment:
Q  39 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccaa 95  Q
    ||||||||||||||||||||| |||||  |||||| | |||||||||||||||||||    
T  185274 ggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagccaa 185330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 6659 - 6609
Alignment:
Q  41 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 91  Q
    ||||||||||| |||||||| |||||||||||||| || ||||||||||||    
T  6659 ggtgcaaaatcacacaattaacaaaagataggggggaacagtgcaattaag 6609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 6877 - 6927
Alignment:
Q  40 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    ||||||||||| |||||||| |||||||||||||||  |||||||||||||||    
T  6877 gggtgcaaaat-gcacaattggcaaaagataggggg-gaaagtgcaattaagc 6927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 73023 - 72967
Alignment:
Q  36 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagc 92  Q
    |||| |||||||||| |||||||||||||||||||  ||| |||| |||||||||||    
T  73023 gaggcggtgcaaaattgcacaattagcaaaagataaaggggaaaaatgcaattaagc 72967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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