View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8163_low_25 (Length: 239)
Name: NF8163_low_25
Description: NF8163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8163_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 9941505 - 9941717
Alignment:
| Q |
11 |
ataaaatcaaatttaattacatataatatgaatcattaaacttgattgaaaacacaatggaacacacacatataatgaaaacgcaataaaaataaaatgc |
110 |
Q |
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| T |
9941505 |
ataaaatcaaatttaattacatataatatgaatcattaaacttgattgaaaacacaatggaatacacacatataatgaaaacgcaataaaaataaaatgc |
9941604 |
T |
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| Q |
111 |
aaggctcctccttgtttgggagagaatggtgatagtgagctttttcattttgctctgtatagttttcggtatttatagtcataaattaggtttaaggtca |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9941605 |
aaggctcctccttgtttgggagagaatggtgatagtgagctttttcattttgctctgtatagttttcggtatttatagtcataaattaggtttaaggtca |
9941704 |
T |
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| Q |
211 |
ttactagctgaag |
223 |
Q |
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||||||||||||| |
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| T |
9941705 |
ttactagctgaag |
9941717 |
T |
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