View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8164_high_2 (Length: 285)
Name: NF8164_high_2
Description: NF8164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8164_high_2 |
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Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 34691415 - 34691174
Alignment:
| Q |
1 |
tacggatccaaggtatgataatatgaaattactacatgattcttgcatagataatgtgaaggtcatacaattacgttgatatgaaattagtacatgattc |
100 |
Q |
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| T |
34691415 |
tacggatccaaggtatgataatatgaaattactacatgattcttgcatagataatgtgaaggtcatacaattacgttgatatgaaattagtacatgattc |
34691316 |
T |
|
| Q |
101 |
ttgcaactctttataatattgatcctataaatagaggttttatgacacttgagatatatagacaataattgaatgatgtagtgatatctagttggttatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34691315 |
ttgcaactctttataatattgatcctataaatagaggtttcatgacacttgagatatatagacaataattgaatgatgtagtgatatctagttggttatt |
34691216 |
T |
|
| Q |
201 |
ctcttgagttttctctagatctttcatctcttggttcttctc |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
34691215 |
ctcttgagttttctctagatctttcatctcttggttcttctc |
34691174 |
T |
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