View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8166_low_14 (Length: 293)
Name: NF8166_low_14
Description: NF8166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8166_low_14 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 21 - 293
Target Start/End: Original strand, 1502229 - 1502501
Alignment:
| Q |
21 |
tggttgatacttctcgtccaagtctagattctagctacatttgcatttgtattgaataacaaagaaaaggactgatttagctatttcgtacaaagttaat |
120 |
Q |
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| T |
1502229 |
tggttgatacttctcgtccaagtctagattctagctacatttgcatttgtattgaataacaacgaaaaagactgatttagctatttcgtacaaagttaat |
1502328 |
T |
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| Q |
121 |
agttgtgcccacatccagtttggcattgcatatataaaagagaaatgaaataaagaatgtactcttgattgaactactatttttatgtggtcaatgttat |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1502329 |
agttgtgcccacatccagtttggcattgcatatataaaagagaaatgaaataaagaatgtactcttgattgaactactatttttatgtggtcaatgttat |
1502428 |
T |
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| Q |
221 |
tgcatttatggacatttttgtgataattgacagttgtattgtattgtgtcgattatacttgagatgtgaacaa |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1502429 |
tgcatttatggacatttttgtgataattgacagttgtattgtattgtgtcgattatacttgagatgtgaacaa |
1502501 |
T |
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