View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8166_low_25 (Length: 229)
Name: NF8166_low_25
Description: NF8166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8166_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 20 - 215
Target Start/End: Complemental strand, 39453353 - 39453158
Alignment:
| Q |
20 |
ggaaagtcatcaccctcaataagggtgtgattttgaacctttattaattatatcattaaaggcccccttcatgaatgaataatgagagaagaggaattca |
119 |
Q |
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| T |
39453353 |
ggaaagtcatcaccctcaataagggtgtgattttgaacctttattaattatatcattaaaggcccccttcatgaatgaataatgagagaagaggaattca |
39453254 |
T |
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| Q |
120 |
tcaagtccctcctcgaaccaaccaccactgaaactccatatggtttccgtctccgaaccagttttcagcaccaatccccaatccgctgctctctgc |
215 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |
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| T |
39453253 |
tcaattccctcctcgaaccaaccaccactgaaactccatatggtttccgtctccgaaccagttttgagcaccagtccccaatccgctgctctctgc |
39453158 |
T |
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