View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8169_low_2 (Length: 612)

Name: NF8169_low_2
Description: NF8169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8169_low_2
NF8169_low_2
[»] chr1 (34 HSPs)
chr1 (219-600)||(6260682-6261068)
chr1 (18-153)||(6261146-6261281)
chr1 (237-412)||(51898603-51898783)
chr1 (237-412)||(32813247-32813427)
chr1 (239-414)||(27564657-27564837)
chr1 (239-413)||(48716204-48716383)
chr1 (286-412)||(2581915-2582041)
chr1 (286-415)||(47452294-47452423)
chr1 (286-413)||(9474850-9474977)
chr1 (246-412)||(50630458-50630629)
chr1 (239-415)||(37649195-37649376)
chr1 (237-413)||(41608413-41608594)
chr1 (237-413)||(50590920-50591101)
chr1 (249-412)||(38632253-38632421)
chr1 (285-385)||(48489328-48489427)
chr1 (237-415)||(47748440-47748622)
chr1 (239-412)||(3000319-3000497)
chr1 (237-412)||(5958920-5959100)
chr1 (239-412)||(38595154-38595332)
chr1 (286-412)||(45044534-45044660)
chr1 (286-407)||(44548350-44548471)
chr1 (288-392)||(11152354-11152458)
chr1 (237-412)||(49811447-49811627)
chr1 (286-412)||(37926412-37926538)
chr1 (239-412)||(41758805-41758983)
chr1 (286-382)||(13414791-13414887)
chr1 (290-412)||(43132-43254)
chr1 (286-411)||(44453980-44454105)
chr1 (297-412)||(8346373-8346488)
chr1 (237-414)||(3302453-3302635)
chr1 (237-369)||(44332291-44332428)
chr1 (285-412)||(23597064-23597191)
chr1 (287-412)||(7740733-7740858)
chr1 (286-407)||(26274437-26274555)
[»] chr3 (36 HSPs)
chr3 (237-409)||(26754698-26754875)
chr3 (237-412)||(48375626-48375806)
chr3 (237-412)||(8076393-8076573)
chr3 (237-414)||(26141450-26141634)
chr3 (239-414)||(53982009-53982189)
chr3 (237-412)||(11347842-11348022)
chr3 (237-412)||(41189684-41189864)
chr3 (239-413)||(33644199-33644378)
chr3 (239-408)||(52629304-52629478)
chr3 (239-412)||(54868817-54868995)
chr3 (237-413)||(45058473-45058653)
chr3 (237-412)||(14623759-14623939)
chr3 (237-412)||(51419280-51419460)
chr3 (239-412)||(49607414-49607592)
chr3 (237-412)||(33118770-33118951)
chr3 (237-412)||(11907371-11907547)
chr3 (285-412)||(24699927-24700054)
chr3 (237-407)||(30801653-30801828)
chr3 (237-413)||(20764835-20765016)
chr3 (237-412)||(8956762-8956942)
chr3 (237-412)||(35536626-35536806)
chr3 (286-407)||(31456694-31456815)
chr3 (237-407)||(13897975-13898150)
chr3 (285-412)||(41080709-41080834)
chr3 (237-412)||(47531865-47532045)
chr3 (312-407)||(48587091-48587186)
chr3 (239-412)||(9562999-9563177)
chr3 (286-412)||(17470405-17470531)
chr3 (286-412)||(36707402-36707524)
chr3 (286-390)||(36331303-36331407)
chr3 (237-412)||(1758379-1758558)
chr3 (312-412)||(27714891-27714991)
chr3 (237-412)||(35093585-35093765)
chr3 (237-409)||(42823114-42823291)
chr3 (312-412)||(11095355-11095453)
chr3 (289-415)||(39670009-39670134)
[»] chr8 (35 HSPs)
chr8 (237-412)||(15258849-15259029)
chr8 (237-412)||(37038479-37038659)
chr8 (237-415)||(43414501-43414684)
chr8 (238-413)||(40423864-40424044)
chr8 (237-407)||(5957835-5958010)
chr8 (237-392)||(8841352-8841512)
chr8 (239-412)||(30479396-30479574)
chr8 (239-405)||(14547929-14548100)
chr8 (286-412)||(12831047-12831173)
chr8 (237-413)||(15048101-15048282)
chr8 (239-415)||(504043-504224)
chr8 (238-412)||(16056322-16056501)
chr8 (288-414)||(15197331-15197457)
chr8 (286-412)||(16383377-16383503)
chr8 (239-412)||(24307715-24307893)
chr8 (239-412)||(34307216-34307394)
chr8 (239-414)||(23122519-23122699)
chr8 (286-414)||(34012270-34012398)
chr8 (290-412)||(4854841-4854963)
chr8 (237-412)||(32032725-32032904)
chr8 (237-412)||(10284551-10284731)
chr8 (286-410)||(10621061-10621185)
chr8 (286-412)||(1179914-1180040)
chr8 (285-414)||(20074915-20075036)
chr8 (237-412)||(42221515-42221695)
chr8 (286-364)||(9122233-9122311)
chr8 (286-412)||(44507061-44507187)
chr8 (329-412)||(14055609-14055692)
chr8 (293-415)||(38229426-38229547)
chr8 (237-357)||(40467755-40467880)
chr8 (288-412)||(17443825-17443949)
chr8 (237-336)||(32707923-32708029)
chr8 (237-369)||(42354508-42354645)
chr8 (376-412)||(25838197-25838233)
chr8 (342-412)||(24307629-24307699)
[»] chr4 (36 HSPs)
chr4 (237-412)||(50052348-50052528)
chr4 (237-412)||(29239886-29240066)
chr4 (237-413)||(50526091-50526272)
chr4 (239-412)||(41236347-41236525)
chr4 (239-412)||(42044289-42044467)
chr4 (286-413)||(6034043-6034170)
chr4 (257-413)||(11511402-11511563)
chr4 (237-412)||(55475191-55475371)
chr4 (258-412)||(480388-480547)
chr4 (239-392)||(24995029-24995187)
chr4 (239-412)||(48182971-48183149)
chr4 (237-412)||(19670636-19670816)
chr4 (237-412)||(48647646-48647826)
chr4 (286-413)||(54473507-54473634)
chr4 (286-412)||(8343137-8343263)
chr4 (286-412)||(47986208-47986334)
chr4 (237-412)||(29547879-29548059)
chr4 (237-413)||(31910191-31910372)
chr4 (237-416)||(40574775-40574959)
chr4 (239-408)||(53352496-53352661)
chr4 (286-392)||(17983717-17983823)
chr4 (286-412)||(29234219-29234345)
chr4 (286-412)||(50813866-50813992)
chr4 (286-414)||(18924469-18924597)
chr4 (285-415)||(3481651-3481781)
chr4 (286-412)||(44536720-44536845)
chr4 (237-364)||(41823930-41824062)
chr4 (237-412)||(32766958-32767138)
chr4 (286-412)||(55079687-55079814)
chr4 (286-412)||(23608235-23608361)
chr4 (285-412)||(28480241-28480368)
chr4 (285-412)||(28481116-28481243)
chr4 (285-412)||(28481991-28482118)
chr4 (286-383)||(29589714-29589811)
chr4 (290-369)||(56300143-56300222)
chr4 (291-412)||(29977885-29978006)
[»] chr2 (37 HSPs)
chr2 (237-406)||(3439985-3440159)
chr2 (237-412)||(20700815-20700995)
chr2 (237-414)||(40613822-40614004)
chr2 (237-369)||(3737986-3738123)
chr2 (239-407)||(28863460-28863633)
chr2 (237-412)||(26891424-26891604)
chr2 (286-412)||(33436074-33436200)
chr2 (239-415)||(13438340-13438521)
chr2 (237-412)||(42257193-42257373)
chr2 (239-412)||(17473020-17473198)
chr2 (239-407)||(19930742-19930915)
chr2 (286-413)||(17819978-17820105)
chr2 (237-415)||(43490118-43490301)
chr2 (239-412)||(7465657-7465835)
chr2 (286-412)||(9058480-9058606)
chr2 (239-412)||(30915463-30915641)
chr2 (289-412)||(32505625-32505748)
chr2 (239-413)||(40701477-40701656)
chr2 (239-412)||(10249304-10249482)
chr2 (286-412)||(45097709-45097835)
chr2 (237-412)||(2533124-2533303)
chr2 (239-414)||(28381577-28381757)
chr2 (286-412)||(38732354-38732480)
chr2 (286-392)||(2997461-2997567)
chr2 (286-407)||(41575142-41575264)
chr2 (257-413)||(4060684-4060845)
chr2 (306-415)||(27864701-27864810)
chr2 (312-412)||(5574488-5574588)
chr2 (285-412)||(33436211-33436338)
chr2 (286-412)||(38273116-38273242)
chr2 (237-412)||(36168836-36169016)
chr2 (237-358)||(3034903-3035029)
chr2 (237-392)||(13365373-13365533)
chr2 (329-412)||(38882831-38882913)
chr2 (237-336)||(17823864-17823968)
chr2 (285-412)||(15428713-15428840)
chr2 (286-327)||(44152012-44152053)
[»] chr6 (20 HSPs)
chr6 (237-414)||(30870018-30870193)
chr6 (239-415)||(17598551-17598732)
chr6 (237-412)||(31976248-31976428)
chr6 (239-414)||(32869676-32869856)
chr6 (237-412)||(15989962-15990142)
chr6 (237-412)||(30341280-30341460)
chr6 (237-413)||(15507944-15508125)
chr6 (286-407)||(22880632-22880753)
chr6 (237-412)||(31110681-31110859)
chr6 (237-414)||(31952950-31953132)
chr6 (239-391)||(11427639-11427796)
chr6 (237-413)||(4231547-4231728)
chr6 (286-413)||(31109374-31109501)
chr6 (286-412)||(6209439-6209565)
chr6 (237-407)||(28536408-28536581)
chr6 (237-412)||(12732482-12732661)
chr6 (239-412)||(29857827-29858005)
chr6 (286-412)||(15832577-15832703)
chr6 (286-408)||(9379686-9379808)
chr6 (286-405)||(946383-946502)
[»] scaffold0321 (1 HSPs)
scaffold0321 (239-412)||(10031-10209)
[»] chr5 (31 HSPs)
chr5 (237-412)||(31008988-31009168)
chr5 (239-415)||(14831811-14831992)
chr5 (239-407)||(18520806-18520979)
chr5 (237-412)||(6679698-6679878)
chr5 (286-415)||(28177772-28177901)
chr5 (237-412)||(2252088-2252268)
chr5 (237-412)||(35943812-35943992)
chr5 (286-414)||(40145405-40145533)
chr5 (239-412)||(2740274-2740452)
chr5 (237-412)||(3921185-3921365)
chr5 (247-412)||(36732872-36733042)
chr5 (237-412)||(15409530-15409710)
chr5 (237-358)||(21370058-21370184)
chr5 (286-414)||(33149612-33149740)
chr5 (237-412)||(39688817-39688997)
chr5 (286-405)||(13811659-13811778)
chr5 (286-413)||(26720515-26720642)
chr5 (286-413)||(26990264-26990391)
chr5 (239-413)||(35785198-35785377)
chr5 (285-412)||(20073489-20073616)
chr5 (286-415)||(42414276-42414405)
chr5 (286-407)||(36875586-36875698)
chr5 (286-407)||(16327906-16328027)
chr5 (285-340)||(2177436-2177491)
chr5 (285-412)||(33825297-33825424)
chr5 (291-413)||(6259980-6260102)
chr5 (256-363)||(25831334-25831446)
chr5 (321-404)||(41470425-41470508)
chr5 (286-368)||(39557491-39557573)
chr5 (320-366)||(31132390-31132436)
chr5 (376-408)||(10356638-10356670)
[»] chr7 (40 HSPs)
chr7 (239-412)||(8080305-8080483)
chr7 (239-414)||(19329840-19330020)
chr7 (239-412)||(38837217-38837395)
chr7 (237-412)||(12310906-12311084)
chr7 (237-412)||(46033721-46033901)
chr7 (285-412)||(36208173-36208300)
chr7 (286-415)||(35137530-35137659)
chr7 (237-415)||(8238209-8238393)
chr7 (286-412)||(40846087-40846213)
chr7 (237-413)||(41423681-41423862)
chr7 (237-412)||(7727906-7728086)
chr7 (237-412)||(18207180-18207359)
chr7 (237-412)||(26296644-26296824)
chr7 (237-412)||(38044197-38044377)
chr7 (237-412)||(41915741-41915921)
chr7 (286-413)||(38267039-38267166)
chr7 (237-412)||(22343361-22343541)
chr7 (286-407)||(3784000-3784121)
chr7 (286-407)||(32951467-32951588)
chr7 (237-415)||(21234398-21234581)
chr7 (285-412)||(35468828-35468955)
chr7 (286-412)||(7389389-7389515)
chr7 (286-413)||(32564400-32564527)
chr7 (237-411)||(35522877-35523056)
chr7 (286-412)||(4999488-4999614)
chr7 (312-412)||(3434562-3434662)
chr7 (312-412)||(36361913-36362013)
chr7 (317-412)||(46374807-46374902)
chr7 (286-412)||(19436161-19436287)
chr7 (239-412)||(40957707-40957885)
chr7 (237-413)||(39255844-39256024)
chr7 (312-412)||(36362026-36362126)
chr7 (237-382)||(16374744-16374894)
chr7 (237-415)||(31735881-31736057)
chr7 (239-342)||(11044248-11044356)
chr7 (285-364)||(27744282-27744361)
chr7 (288-392)||(3694387-3694491)
chr7 (237-369)||(2318161-2318300)
chr7 (285-412)||(10343536-10343663)
chr7 (237-283)||(46374744-46374790)
[»] scaffold1268 (1 HSPs)
scaffold1268 (237-415)||(849-1032)
[»] scaffold1267 (1 HSPs)
scaffold1267 (237-415)||(849-1032)
[»] scaffold0316 (2 HSPs)
scaffold0316 (284-389)||(17077-17177)
scaffold0316 (237-318)||(17197-17283)
[»] scaffold0110 (1 HSPs)
scaffold0110 (237-413)||(8783-8964)
[»] scaffold0018 (1 HSPs)
scaffold0018 (237-392)||(152518-152678)
[»] scaffold0237 (1 HSPs)
scaffold0237 (239-412)||(4029-4207)


Alignment Details
Target: chr1 (Bit Score: 279; Significance: 1e-156; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 219 - 600
Target Start/End: Complemental strand, 6261068 - 6260682
Alignment:
Q  219 ggactatattgcccttgcaaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatag 313  Q
    ||||||||||||||||| ||||||||||||| || || ||||||| ||||||||||||||||||||     |||| ||||||||||||||||||||||||    
T  6261068 ggactatattgcccttggaaaatgttacatacacaccatttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaagaaatag 6260969  T
Q  314 aaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| || || |||||| |||||||||||||||||| ||||||||||||    
T  6260968 aaaatgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatctatcataactca 6260869  T
Q  414 ttgcccttagtagtgctttgtgttattgtgttctttctttctcatattgtcaatcccaaaaaagattgttattcgtcattttatttttgggaagtagttt 513  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  6260868 ttgccgttagtagtgctttgtgttattgtgttctttctttctcatattgtcaatcccaaaaaagattgttattcgtcatttcattcttgggaagtagttt 6260769  T
Q  514 aattgttagatctcacacattttaaatatgaagaagggactgtctggatttgaaccatgacccctgcatatattatgtgatgtccat 600  Q
    ||||| ||||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||| ||||||||    
T  6260768 aattgctagatctcacacattttaaatatgaagaaggggttgtctgtgtttgaaccatgacccctgcatatattatgtcatgtccat 6260682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 6261281 - 6261146
Alignment:
Q  18 gatatgagttgttctgcgcttgttctgcatagaagagattttctagatatgtttatgagcatttttataagctctgtggcaatttctccggcgaagaaat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6261281 gatatgagttgttctgcgcttgttctgcatagaagagattttctagatatgtttatgagcatttttataagctctgtggcaatttctccggcgaagaaat 6261182  T
Q  118 cgttcagtgccatttttgaacacttcttaactacta 153  Q
    ||||||||||||||||||||||||||||||||||||    
T  6261181 cgttcagtgccatttttgaacacttcttaactacta 6261146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 51898603 - 51898783
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || ||||||||||| ||||||| ||||||||||      ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  51898603 aaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcggg 51898702  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
     |||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||| ||| |||||||||||| ||||    
T  51898703 atccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 32813427 - 32813247
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||||| ||||||||| ||||||||||  ||     ||||||||||||||||||  ||| ||||| ||||||||||||||    
T  32813427 aaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggg 32813328  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||| |||||||| ||| |||||||| ||||| |||  |||| ||||||||||||||||||| |||||||||||||||||    
T  32813327 gtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 239 - 414
Target Start/End: Original strand, 27564657 - 27564837
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||||||  |     |||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  27564657 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 27564756  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcat 414  Q
    ||||||||  || ||| |||||||| ||||| |||| || | ||||||||||||||||||| |||||||||||| ||||||    
T  27564757 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactcat 27564837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 239 - 413
Target Start/End: Original strand, 48716204 - 48716383
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||||||  |     ||||||||||||||||| |  ||| | ||| ||||||||||||||||    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggt 48716303  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    ||||||||| || ||| |||||||| |||||||||| || | ||||||||||||||||| | |||||||||||| |||||    
T  48716304 ccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactca 48716383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 286 - 412
Target Start/End: Complemental strand, 2582041 - 2581915
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||    
T  2582041 taggaagagagaagaggagagaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 2581942  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||| | |||||||||||| ||||    
T  2581941 cctaagggtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 286 - 415
Target Start/End: Original strand, 47452294 - 47452423
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||||| |||||||||| || |||||||||||| ||||| |||| |||| |||||| |||    
T  47452294 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattacca 47452393  T
Q  386 cctaaggatatctatgtatcataactcatt 415  Q
    ||||||| | |||||||||||| |||||||    
T  47452394 cctaagggtgtctatgtatcattactcatt 47452423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 286 - 413
Target Start/End: Original strand, 9474850 - 9474977
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||| |||||||||||||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||    
T  9474850 taggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 9474949  T
Q  386 cctaaggatatctatgtatcataactca 413  Q
    ||||||| | |||||||||||| |||||    
T  9474950 cctaagggtgtctatgtatcattactca 9474977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 246 - 412
Target Start/End: Complemental strand, 50630629 - 50630458
Alignment:
Q  246 catagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtg 340  Q
    ||||||| || ||||||  |||||||| ||||||||||| |     |||||||||||||||||||  ||| ||||| |||||||||||||||||||||||    
T  50630629 catagacaccatttattctcatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtg 50630530  T
Q  341 accacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    || || ||| |||||||| ||||| |  | |||| ||||||||||||||||| |||||||||||||| ||||    
T  50630529 actacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 239 - 415
Target Start/End: Complemental strand, 37649376 - 37649195
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||||||  |     |||||||||||||||||||  |||  |||| |||||||||||||  |    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagggaaagtgtgcttgtgcggaat 37649277  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcatt 415  Q
     ||||||||||| ||| |||||||| ||||| |||| |||  ||||||||||||||| ||| |||||||||||| |||||||    
T  37649276 tcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactcatt 37649195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 237 - 413
Target Start/End: Original strand, 41608413 - 41608594
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || || |||| || |||||||| ||||||||||| |     ||||||||||||||| |||||||| ||||| ||| ||||| ||||    
T  41608413 aaaatgttacataaacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtacggg 41608512  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    |||||  || |||||||| |||||||| ||||  |||| | || ||||||||||||||||||| | ||||||||||||||||    
T  41608513 gtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactca 41608594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 237 - 413
Target Start/End: Original strand, 50590920 - 50591101
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||  || |||| || |||||||| ||||||||||  |     ||||||||||||||| |||||||| ||||| ||| ||||||||||    
T  50590920 aaaatgttacatagataccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 50591019  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    |||||  || |||||||| |||||||| ||||| |||| | || ||||||||||||||||| | | ||||||||||||||||    
T  50591020 gtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactca 50591101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 249 - 412
Target Start/End: Original strand, 38632253 - 38632421
Alignment:
Q  249 agaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgacc 343  Q
    |||| ||||||||| ||||||||| ||||||||||  |     |||||||||||||||||||  ||| | ||| |||||||||||||||||||||||||     
T  38632253 agacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgact 38632352  T
Q  344 acatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    || ||| |||||||| |||||||||  || | ||||||||||||||||| | |||||||||||| ||||    
T  38632353 acgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 48489427 - 48489328
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||| |||||||||    
T  48489427 ctaggaagagagaagaggtgagaaaatagaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtcc-agggtgtattgcc 48489329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 237 - 415
Target Start/End: Complemental strand, 47748622 - 47748440
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||  ||||||||||  |     ||||||||||||||| |||||||| ||||| | | ||||||||||    
T  47748622 aaaatgttacatagacaccttttaattgcatacactcttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcggg 47748523  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcatt 415  Q
     ||||  || |||||||| |||||||||| ||| ||| ||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  47748522 atccatatggccacatgtcagatttttatatgggtgt-caagggtgtattgccacctaagggtatttatgtatcataactcatt 47748440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 3000497 - 3000319
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| |||||||||  || ||||||||||||||| ||||||||||  ||     ||||||||||||| ||||  ||| ||||| ||||||||| ||||||    
T  3000497 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 3000398  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||||| | | |||||||||| ||||    
T  3000397 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 5958920 - 5959100
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| |  |||| || |||||||| ||||||||||  |     ||||||||||||||| |||||||| ||||| ||| ||||||||||    
T  5958920 aaaatgttacatagacacattttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 5959019  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||  ||||||||||| |||||||| ||||| |||| |  | ||||||||||| ||||| | | |||||||||||||||    
T  5959020 gtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 38595332 - 38595154
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| |||||||||  || ||||||||||||||| ||||||||||  ||     ||||||||||||| ||||  ||| ||||| ||||||||| ||||||    
T  38595332 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 38595233  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||| | | | |||||||||| ||||    
T  38595232 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 45044534 - 45044660
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||  ||| |||||||||| |||||||||||||| ||| | |||||| |||||||| | ||| |||| || | ||||||||||    
T  45044534 taggaagagagaagagaagagaaaagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgcca 45044633  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    |||||||| || |||||||||||||||    
T  45044634 cctaaggaaatgtatgtatcataactc 45044660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 286 - 407
Target Start/End: Original strand, 44548350 - 44548471
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||| ||||  ||| ||||| ||||||||||||||||||||||||| || ||| |||||||| ||||| | || || | ||||||||||    
T  44548350 taggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgcca 44548449  T
Q  386 cctaaggatatctatgtatcat 407  Q
    ||||| ||| ||||||||||||    
T  44548450 cctaaagatgtctatgtatcat 44548471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 11152354 - 11152458
Alignment:
Q  288 ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacc 387  Q
    |||||||||||||||||| |||| |||||  |||||||||||||||| || |||| || ||| |||||||| |||||||||| |||| ||||||||||||    
T  11152354 ggaagagagaagaggagaggaaaaagaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacc 11152453  T
Q  388 taagg 392  Q
    |||||    
T  11152454 taagg 11152458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 49811447 - 49811627
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| |||||||||  |||||||| |||| ||||     |  ||||||||||||||||||||  ||| ||||| |||||||||||||     
T  49811447 aaaatgttacatagacaccctttattctcatacacccttgtgcaccacatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgga 49811546  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||| |  || | || ||| |||||||| |||||||||| || | ||||||| ||||||||||| ||||| |||||||||||    
T  49811547 gtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 37926412 - 37926538
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||  ||| ||||| ||| ||||| |||| |||| ||| |||| ||| |||||||||||||| |||  || | ||||||||||    
T  37926412 taggaagagagaagagaagagaaaagagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgcca 37926511  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||| |||||||||||||||||||||    
T  37926512 cctaaagatatctatgtatcataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 41758983 - 41758805
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| |||||||||  |||||||| ||||||||||  |     |||||||||||||||||||  ||| ||||| |||| |||||||||||    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 41758884  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||| ||||| || ||| |||||||| ||||| |||| |||| ||||||||||  ||| | | |||||||||||| ||||    
T  41758883 ccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 13414887 - 13414791
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattg 382  Q
    ||||||||||||||| || |  ||| |||||||||||||||| |||||||||||||| || |||||||||||| ||||| |||| |||| |||||||    
T  13414887 taggaagagagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 290 - 412
Target Start/End: Complemental strand, 43254 - 43132
Alignment:
Q  290 aagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccaccta 389  Q
    |||||||| |||||||  ||| ||||| ||||||||||||| ||||||||||| || ||| |||||||| ||||| |||| |||| ||||||| | ||||    
T  43254 aagagagaggaggagagaaaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctccta 43155  T
Q  390 aggatatctatgtatcataactc 412  Q
    ||  | |||||||||||| ||||    
T  43154 agactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 286 - 411
Target Start/End: Complemental strand, 44454105 - 44453980
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||| |||| |||| | ||| |||||||||| ||| ||||||| ||||||||| |||||||| ||||| | || |  | ||||||||||    
T  44454105 taggaagagagaagatgagaggaaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgcca 44454006  T
Q  386 cctaaggatatctatgtatcataact 411  Q
    | ||| | | ||||||||||||||||    
T  44454005 cttaaaggtgtctatgtatcataact 44453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 412
Target Start/End: Original strand, 8346373 - 8346488
Alignment:
Q  297 aagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatat 396  Q
    |||||||||  ||| ||||| ||||||||||| ||||||||||||| || ||| |||||||| ||||| |||| || | ||||||||||||||| | |      
T  8346373 aagaggagagaaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtga 8346472  T
Q  397 ctatgtatcataactc 412  Q
    ||||||||||| ||||    
T  8346473 ctatgtatcattactc 8346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 414
Target Start/End: Original strand, 3302453 - 3302635
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||| ||| ||  ||||||||  |||||||| ||||||||||| ||     ||||||||||||| |||| |||| ||||| |||||||||  |||    
T  3302453 aaaatgttatataaacatcctttattaacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaaaagaaagtgtgcttgtatggg 3302552  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcat 414  Q
    |||||  |||  || ||| |||||||| ||||| |||||| |  | ||||| ||||||||||| | |||||||||| ||||||    
T  3302553 gtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattactcat 3302635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 369
Target Start/End: Original strand, 44332291 - 44332428
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||  || |||| || |||||||| |||||||| || |     ||||||||||||||| |||||||| ||||| | | ||||||||||    
T  44332291 aaaatgttacatagataccttttaattgcatacacccttgtacactctatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcggg 44332390  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtc 369  Q
    |||||   | |||||||| |||||||||||||| ||||    
T  44332391 gtccatagggccacatgtcagatttttatgtgggtgtc 44332428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 412
Target Start/End: Original strand, 23597064 - 23597191
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    ||||||| |||||| ||||||  ||| | ||| |||| ||||||  |||| ||||| |||| ||| |||||||||||||| | || |||  |||||||||    
T  23597064 ctaggaatagagaataggagagaaaagataaagtgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgcc 23597163  T
Q  385 acctaaggatatctatgtatcataactc 412  Q
    |||||| ||| |||||||||||| ||||    
T  23597164 acctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 7740858 - 7740733
Alignment:
Q  287 aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccac 386  Q
    ||||||||||||||||||| |||| ||||||| |  ||||| ||||||||| |  |||| ||| | |||||||||| | |||| | || ||||||| |||    
T  7740858 aggaagagagaagaggagatgaaaaagaaaatatatttgtgtggggtccacatagccacgtgtcatatttttatgtaggtgtcaatggatgtattgtcac 7740759  T
Q  387 ctaaggatatctatgtatcataactc 412  Q
     ||||| | || ||||||||||||||    
T  7740758 ataaggttgtcaatgtatcataactc 7740733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 407
Target Start/End: Complemental strand, 26274555 - 26274437
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| ||||  || | ||| ||| ||||||| || |||||||||| |  ||| |||||||| |||||||||| || | ||||||||||    
T  26274555 taggaagagagaagag-agaa--aagaaaaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgcca 26274459  T
Q  386 cctaaggatatctatgtatcat 407  Q
    | ||||| | ||||||||||||    
T  26274458 cataagggtgtctatgtatcat 26274437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 2e-57; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 237 - 409
Target Start/End: Complemental strand, 26754875 - 26754698
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||     ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  26754875 aaaatgttacatagacactctttatttccatacacctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 26754776  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataa 409  Q
    ||||| |||||||||||| |||||||| ||||||||||||||| ||||||||||||||||| | |||||| |||||||    
T  26754775 gtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcataa 26754698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 48375626 - 48375806
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||     ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  48375626 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 48375725  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||| ||||||||| || |||||||| | ||||| | || || ||||||| ||||||||| | |||||| ||||||||||    
T  48375726 gtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcataactc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 8076573 - 8076393
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||  ||||||| |||||||||||      ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  8076573 aaaatgttacatagacaccatttattctcatacacttttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcggg 8076474  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||||| || |||||||||||| ||||| |||| |||| |||| |||||||||||| | | |||||||||| ||||    
T  8076473 gtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 237 - 414
Target Start/End: Original strand, 26141450 - 26141634
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagaga--gaagaggagaagaaatagaaaatgtgcttgtgcg 329  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||  ||     ||||||||  ||||||||||  ||| ||||| |||||||||| |    
T  26141450 aaaatgttacatagacaccctttatttccatacactcttgtacaccccatacattaggaagagaaagaagaggagagaaaagagaaagtgtgcttgtgtg 26141549  T
Q  330 gggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcat 414  Q
    ||||||| |||||||| ||| |||||||| ||||| |||  |||| ||||||||||||||||||| |||||||||||||||||||    
T  26141550 gggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactcat 26141634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 239 - 414
Target Start/End: Complemental strand, 53982189 - 53982009
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||| | ||||||||||  |     |||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  53982189 aatgatacatagacaccctttattcccatacaaccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 53982090  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcat 414  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||||| | |||||||||||| ||||||    
T  53982089 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcat 53982009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 11347842 - 11348022
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||| ||||||||| ||||||||| ||||||||| || |||||||  ||     ||||||||||||||||||  ||| ||||| ||||||| ||| ||    
T  11347842 aaaatggtacatagacaccctttattcccatacacccttatacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttatgcagg 11347941  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||| ||| |||| ||| |||||||| |||||||||| |||| ||||||| ||||||||||| |||||||||||||||||    
T  11347942 gtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 41189684 - 41189864
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| ||||||||||||||||||  |||||||| |  ||     |||||| |||||||||||  ||| ||||| ||||||||||||||    
T  41189684 aaaatgttacatagacaccctttatttccatacactcttgtacactccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgcggg 41189783  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||| ||| |||| ||| | |||||||||||| |||| || | ||||||||||||||||||| | |||||||||||||||    
T  41189784 gtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 239 - 413
Target Start/End: Complemental strand, 33644378 - 33644199
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||||| || |||||||  |     |||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  33644378 aatgatacatagacaccctttattcccatacacccttatacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 33644279  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| |||||||||||| |||| | |||||||||||| |||||    
T  33644278 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattactca 33644199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 239 - 408
Target Start/End: Complemental strand, 52629478 - 52629304
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||| ||||||||||||||| ||||||| ||  |     |||||||||||||| ||||  ||| ||||| ||||||||| ||||||    
T  52629478 aatgatacatagacacccattatttccatacacccttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 52629379  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcata 408  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||||| | |||||||||||||    
T  52629378 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcata 52629304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 239 - 412
Target Start/End: Original strand, 54868817 - 54868995
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| || |||||||||||||||| ||||||||||| |     |||||||||||||| ||||  ||| ||||| |||| |||||||||||    
T  54868817 aatgatacatagacaccttttatttccatacacccttgtacaccctatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 54868916  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||| || || ||| |||||||| ||||| |||| || | ||||||||||||||||| | |||||||||||| ||||    
T  54868917 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 237 - 413
Target Start/End: Original strand, 45058473 - 45058653
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||  |     ||||||||||||||| |||||||| ||||| | | ||||||||||    
T  45058473 aaaatgttacatagacaccttttaattgcatacaccattgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcggg 45058572  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    |||||  ||  ||||||| |||||||||||||| ||| ||||| ||||||||||||||||| | | ||||||||||||||||    
T  45058573 gtccatatggtcacatgtcagatttttatgtgggtgt-caagggtgtattgccacctaagggtgtttatgtatcataactca 45058653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 14623759 - 14623939
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||  |||||| | || ||||||     | |||| |||||||||||| ||| |||| ||||| |||||||||| | |    
T  14623759 aaaatgttacatagacaccatttattctcatacatccttctacacctcatgcactagaaagagagaagagaagatgaaagagaaagtgtgcttgtgtgag 14623858  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||| ||| ||||||| |||||||||||||| |||| | || ||||||||||||||||||| |||||||||||| ||||    
T  14623859 gtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 51419280 - 51419460
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || || |||||||||||||||| ||||||||||  ||     ||||||||||| ||||||  ||| ||||| ||||||||||||||    
T  51419280 aaaatgttacataaacaccttttatttccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcggg 51419379  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||| | ||| |||| ||| |||||||| ||||| |||  |||| ||||||| || |||||||| |||||||||||||||||    
T  51419380 gtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 49607592 - 49607414
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||||      |  |||||||||| |||||||||  ||| ||||| |||||||||| ||| |    
T  49607592 aatgatacatagacaccctttattcccatacacccttgtacacgtcatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggat 49607493  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||||| | |||||||||||| ||||    
T  49607492 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 33118770 - 33118951
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaag-aggagaagaaatagaaaatgtgcttgtgcgg 330  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||||||      ||||| ||||||||| |||||| |||| ||||| |||| || || ||    
T  33118770 aaaatgttacgtagacaccctttatttccatacacccttgtacaccccatgcactagggagagagaaggaggagaggaaagagaaagtgtgtttctgagg 33118869  T
Q  331 ggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    | |||||||||| || ||| | |||||| ||||| |||| |||| ||||||| ||||||||| | |||||||||||||||||    
T  33118870 gatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 11907547 - 11907371
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctctagga-agagagaagaggagaagaaatagaaaatgtgcttgtgcggggtcc 335  Q
    |||||||||||||||| |||||||||| |||||| |||||| ||||||   | | |   |||||||||||  ||| ||||||||||||||||||||||||    
T  11907547 aaaatgttacatagacaccctttattttcatacatctttgtccaccctaatgcacactaagaagaggagagaaaagagaaaatgtgcttgtgcggggtcc 11907448  T
Q  336 acgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |  ||||||||||| |||||||| ||||  ||| || |  ||||||| ||||||||| | |||||||||||||||||    
T  11907447 atatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcataactc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 285 - 412
Target Start/End: Original strand, 24699927 - 24700054
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    ||||||||||||||||||||| |||| ||||| |||| |||| | ||||||||||| |||| ||  |||||||||||||| |||| || | |||||||||    
T  24699927 ctaggaagagagaagaggagaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgcc 24700026  T
Q  385 acctaaggatatctatgtatcataactc 412  Q
    | |||||||| |||||||||||| ||||    
T  24700027 aactaaggatgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 237 - 407
Target Start/End: Original strand, 30801653 - 30801828
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||  |||||||| ||||||||||      |||||||||||||||| |||| |||| |||||||||||||||| |||    
T  30801653 aaaatgttacatagacaccttttattctcatacacccttgtacaccccatgtactaggaagagagaagatgagaggaaagagaaaatgtgcttgtgtggg 30801752  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcat 407  Q
    |||||  |||| |||||| | |||||| ||||| | || |||| ||||||  ||||||||| | ||||||||||||    
T  30801753 gtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcat 30801828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 413
Target Start/End: Original strand, 20764835 - 20765016
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||  |||||||| ||||||||||  ||     ||||||||||||| ||||  ||| ||||| ||||||||| ||||    
T  20764835 aaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggg 20764934  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    ||||| ||| |||| ||| |||||||| ||||| |||  |||  |||||| |||||||||||| ||||||| ||||||||||    
T  20764935 gtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactca 20765016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 8956942 - 8956762
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||||||  | ||||||  |||||||| || ||||||||     ||||||||||||||||| ||| |||| || || ||||||||||   |    
T  8956942 aaaatgttacatagacagcatttattctcatacacccttctacaccctgtgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtgtaag 8956843  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||| ||| ||| ||| | |||||||||||| |||| |||| ||||||||||| ||||||| |||||||||||| ||||    
T  8956842 gtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 35536806 - 35536626
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||  |||||||| || |||||||      ||||||||||||||||| ||| |||| || || ||||||||||   |    
T  35536806 aaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtgtaag 35536707  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||| ||||||| ||| | |||||||||||| |||| || | ||||||||||| ||||||| |||||||||||| ||||    
T  35536706 gtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 286 - 407
Target Start/End: Complemental strand, 31456815 - 31456694
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||| |||||||||  ||| ||||| |||||||||||||||||||| |||| || ||| |||||||| ||||| |||| |||| |||||||||     
T  31456815 taggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccg 31456716  T
Q  386 cctaaggatatctatgtatcat 407  Q
    |||| || | ||||||||||||    
T  31456715 cctatgggtgtctatgtatcat 31456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 237 - 407
Target Start/End: Original strand, 13897975 - 13898150
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||| |||||| || ||||||  ||||||| ||| |||||||      ||||| ||||||||||| ||| |||| ||||| |||||||||| | |    
T  13897975 aaaatgttagatagacaccatttattctcatacacttttctacaccccatacactagggagagagaagagaagatgaaagagaaagtgtgcttgtgtgag 13898074  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcat 407  Q
    |||||| ||| ||| ||| |||||||||||||| |||| | || ||||||||||||||||||| | ||| ||||||    
T  13898075 gtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcat 13898150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 285 - 412
Target Start/End: Complemental strand, 41080834 - 41080709
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    ||||||||||||||||||||| |||| ||||||||||||||||  |||||||| ||||||||| | ||||||||  |||| |||| |||| ||| ||||     
T  41080834 ctaggaagagagaagaggagatgaaagagaaaatgtgcttgtg-tgggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgct 41080736  T
Q  385 acctaaggatatctatgtatcataactc 412  Q
    | |||||||| |||||||||||| ||||    
T  41080735 a-ctaaggatgtctatgtatcattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 47532045 - 47531865
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtaca--ccctc---taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || ||||||||| ||||||||  |||||||  || |    ||||||||||||| ||||||  ||| ||||| ||||||||||||||    
T  47532045 aaaatgttacataaacaccctttattcccatacacacttgtacattccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcggg 47531946  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    || ||  || |||| ||| ||||| || |||||||||  || | |||||||||| |||||||| |||||||||||||||||    
T  47531945 gttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 312 - 407
Target Start/End: Original strand, 48587091 - 48587186
Alignment:
Q  312 agaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcat 407  Q
    ||||| ||| |||||||||| |||||||||| || ||| |||||||||||| | |||| |||| ||||||||||||||||| ||||||||||||||    
T  48587091 agaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcat 48587186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 9563177 - 9562999
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||  ||||||||| ||||||||||||||||| |     |  ||||||||||||||||||||  | | ||||| |||| |||||| || |    
T  9563177 aatgatacatagataccctttattcccatacacctttgtacaactcatgcattaggaagagagaagaggagagaagagagaaagtgtgtttgtgcaggat 9563078  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||||| |||||||| |||||||||||| || |||| | | | |||||||||| ||||    
T  9563077 ccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattactc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 286 - 412
Target Start/End: Complemental strand, 17470531 - 17470405
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||| ||||  ||| ||||| |||||||||| |||||||||||||| || ||| |||||||| ||||| |||  || | ||||||||||    
T  17470531 taggaagagagaagatgagagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgcca 17470432  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||| | | |||||||||||| ||||    
T  17470431 cctaaaggtgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 36707402 - 36707524
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||||    ||||| ||||||| || || ||| |||||||| |||||||||| |||| ||||||| ||    
T  36707402 taggaagagagaagaggagagaaaagagaaagtgtgc----gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtca 36707497  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||| |||||||||||||| ||||    
T  36707498 cctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 36331303 - 36331407
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||||||| ||||| ||| |||||||||||||||  || |||||||| |||||||| ||||| |||| | || || |||||||    
T  36331303 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgcca 36331402  T
Q  386 cctaa 390  Q
    |||||    
T  36331403 cctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 1758379 - 1758558
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctc----taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcgggg 332  Q
    ||||||||||||| || |  ||||||  |||||||||||||||||||      |||||||||||||||||||| |||| |||||||||| ||||| || |    
T  1758379 aaaatgttacataaacactgtttatt--catacacctttgtacacccatgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtggag 1758476  T
Q  333 tccacgtgaccacatgttagatttttatgtggatgtcca--aggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||| |||| |||| |||||||| ||||| |||| |   || |||||||| ||||| || |  ||||||||||||||||    
T  1758477 tccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatggttgactatgtatcataactc 1758558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 412
Target Start/End: Original strand, 27714891 - 27714991
Alignment:
Q  312 agaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataact 411  Q
    ||||| |||||||||||||||||||| |||| || ||| |||||||| ||||| |||| |||| |||||| |||||||| | | |||||||||||| |||    
T  27714891 agaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcattact 27714990  T
Q  412 c 412  Q
    |    
T  27714991 c 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 35093765 - 35093585
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||| |||||  | ||||||  |||||||||||||||| |     | |||||||||||||| |  ||| | || ||||| |||||||||  ||     
T  35093765 aaaatgttacctagacatcatttattctcatacacctttgtacatctcatgcactaggaagagagaaaaaaagatgcaagagaaagtgtgcttgtatgga 35093666  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    || ||| ||||||||||| ||||||||  ||||||||| || ||||||||| ||||||| | | |||||||||| ||||||    
T  35093665 gttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatcgtaactc 35093585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 409
Target Start/End: Complemental strand, 42823291 - 42823114
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctc------taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcgg 330  Q
    |||||||||||||||| || |||| || |||||||| ||||||||| ||      |||||||||||||||| | |||||| ||||| | | ||| |||||    
T  42823291 aaaatgttacatagacaccttttaattgcatacacccttgtacacc-tcatgtattaggaagagagaagagaataagaaagagaaagtatacttatgcgg 42823193  T
Q  331 ggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataa 409  Q
    ||||||  ||||||||||| | |||||| ||||| |||| | || |||||| |||| ||| | | | ||||||||||||    
T  42823192 ggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcataa 42823114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 412
Target Start/End: Original strand, 11095355 - 11095453
Alignment:
Q  312 agaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataact 411  Q
    ||||| |||| || ||||||||  ||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||||| | |||||||||||| |||    
T  11095355 agaaagtgtgtttatgcggggt--acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 11095452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 415
Target Start/End: Complemental strand, 39670134 - 39670009
Alignment:
Q  289 gaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacct 388  Q
    |||||||||||||||||  ||| || || ||||| ||| || ||||||| ||| ||| ||| | |||||||| | |||||| | || | ||||||||| |    
T  39670134 gaagagagaagaggagagaaaagaggaagtgtgcgtgtacgaggtccacatgatcacgtgtcaaatttttatatagatgtcaagggatatattgccacat 39670035  T
Q  389 aaggatatctatgtatcataactcatt 415  Q
    |||||| ||||||||| ||||||||||    
T  39670034 aaggatgtctatgtat-ataactcatt 39670009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 6e-57; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 15258849 - 15259029
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccc-----tctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| |||||||||||||||||| |||||||| ||     |||||||||||||||||||||| |||| ||||||||||||||||| ||    
T  15258849 aaaatgttacatagacaccctttatttccatacacttttgtacatcctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcagg 15258948  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||  |||||||||||||||||||    
T  15258949 gtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataactc 15259029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 37038659 - 37038479
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || ||||||||||| ||||||| ||||||||||      ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  37038659 aaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcggg 37038560  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
     |||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||| ||| |||||||||||| ||||    
T  37038559 atccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 237 - 415
Target Start/End: Original strand, 43414501 - 43414684
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||||||  ||     ||||||||||||||||||  ||| ||||| ||||||||||||||    
T  43414501 aaaatgttacatagacaccctttattgccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggg 43414600  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcatt 415  Q
     |||| |||||||| |||||||||||| ||||| |||| |||| ||| |||||| |||||||| ||||||||||||||||||||    
T  43414601 atccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactcatt 43414684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 238 - 413
Target Start/End: Original strand, 40423864 - 40424044
Alignment:
Q  238 aaatgttacatagaccccctttatttccatacacctttgtacaccctc------taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||| ||||||||| || |||||| ||||||||| ||||||||| ||      ||||||||||||||||||||  ||| ||||| ||||||||||||||    
T  40423864 aaatgatacatagacaccttttattcccatacacccttgtacacc-tcatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggg 40423962  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    |||||| |||| || ||| |||||||| |||||||||| |||| ||||||||||||||||| |||||||||||||| |||||    
T  40423963 gtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattactca 40424044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 237 - 407
Target Start/End: Complemental strand, 5958010 - 5957835
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || |||||||||  |||||||| |||||||||     | ||||||||||||||||||||| |||| ||||| |||| |||||||||    
T  5958010 aaaatgttacataaacaccctttattctcatacacccttgtacacctcatgcactaggaagagagaagaggagaggaaagagaaagtgtgattgtgcggg 5957911  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcat 407  Q
     |||||||||| || ||| |||||||| ||||| |||| |||| |||||||||||||||| || ||||||||||||    
T  5957910 atccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcat 5957835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 392
Target Start/End: Original strand, 8841352 - 8841512
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||  |||||||  ||||||||||      ||||||| ||||||||||||| |||| ||||| ||||||||||||||    
T  8841352 aaaatgttacatagacaccatttattctcatacactcttgtacaccccatgcactaggaaaagagaagaggagaggaaagagaaagtgtgcttgtgcggg 8841451  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaagg 392  Q
    ||||||||||| || |||||||||||| ||||| |||| |||| |||| ||||||||||||    
T  8841452 gtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 239 - 412
Target Start/End: Original strand, 30479396 - 30479574
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctc------taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcgggg 332  Q
    |||||||||||||| || |||| || |||||||| ||||||||| ||      |||||||||||||||| |||||||| ||||| ||| |||||||| ||    
T  30479396 aatgttacatagacaccttttaattgcatacacccttgtacacc-tcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgagg 30479494  T
Q  333 tccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||  |  |||||||| ||||||||||||||||||| |||| ||||||||||||||||| | | |||||||||||||||    
T  30479495 tccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 239 - 405
Target Start/End: Complemental strand, 14548100 - 14547929
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||| | ||||||||||  |     |||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  14548100 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 14548001  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatc 405  Q
    ||||||||| || ||| |||||||| ||||| |||| || | ||||||||||||||||| | ||||||||||    
T  14548000 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatc 14547929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 286 - 412
Target Start/End: Complemental strand, 12831173 - 12831047
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||| || ||| |||||||| ||||| |||| |||| ||||||| ||    
T  12831173 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtca 12831074  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||| | |||||||||||| ||||    
T  12831073 cctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 413
Target Start/End: Original strand, 15048101 - 15048282
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggaga-agaaatagaaaatgtgcttgtgcgg 330  Q
    ||||||||| |||||| ||||||||| | ||||||| ||||||| ||  ||     |||||||||||||||||| | ||| ||||| |||||||||||||    
T  15048101 aaaatgttatatagacaccctttattccgatacacccttgtacatcccatacattaggaagagagaagaggagataaaaagagaaagtgtgcttgtgcgg 15048200  T
Q  331 ggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    |||||| ||| | || ||| |||||||| ||||| |||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  15048201 ggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactca 15048282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 239 - 415
Target Start/End: Original strand, 504043 - 504224
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| |||||||||  |||||||| ||||||||||  |     |||||||||||||| ||||  ||| ||||  ||||||||||||||||    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaatgtgtgcttgtgcggggt 504142  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcatt 415  Q
    ||||||||| || ||| |||||||| ||||| |||| || | ||||||||||||||||| | |||||||||||| |||||||    
T  504143 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactcatt 504224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 238 - 412
Target Start/End: Original strand, 16056322 - 16056501
Alignment:
Q  238 aaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcgggg 332  Q
    ||||||||||||||| || |||| || |||||||| ||||||||||  |     ||||||||||||||| |||||||| ||||| ||| |||||||||||    
T  16056322 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 16056421  T
Q  333 tccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||  || |||||||| |||||||| ||||| |||| | || ||||||| ||| ||||||| | |||||||||||||||    
T  16056422 tccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactc 16056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 288 - 414
Target Start/End: Complemental strand, 15197457 - 15197331
Alignment:
Q  288 ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacc 387  Q
    |||||||| |||||||||  ||| ||||| ||||||||||||||||||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||    
T  15197457 ggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacc 15197358  T
Q  388 taaggatatctatgtatcataactcat 414  Q
    ||||  | |||||||||||| ||||||    
T  15197357 taagagtgtctatgtatcattactcat 15197331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 286 - 412
Target Start/End: Complemental strand, 16383503 - 16383377
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||||||| ||||| ||| |||||||||||||||  || |||||||| |||||||| ||||| |||| | || ||||||||||    
T  16383503 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 16383404  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||| | | |||||||||||||||    
T  16383403 cctaagggtgtttatgtatcataactc 16383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 239 - 412
Target Start/End: Original strand, 24307715 - 24307893
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||||||||||||| || |||| || |||||||| ||||||||||  |     ||||||||||||||| |||||||| ||||| ||| ||||||||||||    
T  24307715 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 24307814  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||  || |||||| | |||||||| ||||| |||| | || ||||||||||||||||| | | |||||||||||||||    
T  24307815 ccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 24307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 34307394 - 34307216
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||||||||||||| || |||| || |||||||| ||||||||||  ||     |||||||||||||| |||||||| ||||| ||| ||||||||||||    
T  34307394 aatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 34307295  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
     ||  || |||||||| |||||||| ||||| |||| | || ||||||||||||||||| | | |||||||||||||||    
T  34307294 tcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 239 - 414
Target Start/End: Original strand, 23122519 - 23122699
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| |||||||||  |||||||| ||||||||||  |     |||||||||||| ||||||  ||| ||||| ||||||| ||||||||    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaacaggagagaaaagagaaagtgtgcttatgcggggt 23122618  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcat 414  Q
    ||||||||| || ||| |||||||| ||||| |||| || | ||||||||||| ||||| | |||||||||||| ||||||    
T  23122619 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattactcat 23122699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 286 - 414
Target Start/End: Original strand, 34012270 - 34012398
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||||| |||||||||| || ||| | |||||| ||||| |||| |||| |||||| |||    
T  34012270 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattacca 34012369  T
Q  386 cctaaggatatctatgtatcataactcat 414  Q
    ||||||| | |||||||||||| ||||||    
T  34012370 cctaagggtgtctatgtatcattactcat 34012398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 290 - 412
Target Start/End: Original strand, 4854841 - 4854963
Alignment:
Q  290 aagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccaccta 389  Q
    ||||||||||||||||  ||| ||||| ||||||||||| ||||||| ||| |||||| | |||||||||||| | |||  |||| ||||||||||||||    
T  4854841 aagagagaagaggagagaaaagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccaccta 4854940  T
Q  390 aggatatctatgtatcataactc 412  Q
    ||||| |||||||||||| ||||    
T  4854941 aggatgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 32032904 - 32032725
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctc------taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcgg 330  Q
    |||||||||||||||| || |||| || |||||||| ||||||||| ||      |||||||||||||||| || ||||| ||||| ||| ||||||| |    
T  32032904 aaaatgttacatagacaccttttaattgcatacacccttgtacacc-tcatgtattaggaagagagaagagaaggagaaagagaaagtgtacttgtgcag 32032806  T
Q  331 ggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    | ||||  || |||||||| |||||||| ||||||||| ||||| ||||||||||||||||| | | |||||||||||||||    
T  32032805 gatccatatggccacatgtcagatttttgtgtggatgt-caaggatgtattgccacctaagggtgtttatgtatcataactc 32032725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 10284551 - 10284731
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||   ||||| | ||||||||||      |||||||||||||||| || | |||| ||||| ||||||||||||||    
T  10284551 aaaatgttacatagacaccttttattcttatacaaccttgtacaccccatgcactaggaagagagaagatgaaaggaaagagaaagtgtgcttgtgcggg 10284650  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||||| || ||| | |||||| ||||| |||| |||  ||||||| ||| ||||| | |||||||||||||||||    
T  10284651 gtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 286 - 410
Target Start/End: Original strand, 10621061 - 10621185
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||||| || | ||| | || ||| |||||||| ||||| |||| |||| |||||| |||    
T  10621061 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattacca 10621160  T
Q  386 cctaaggatatctatgtatcataac 410  Q
    ||||||||| |||||||||||||||    
T  10621161 cctaaggatgtctatgtatcataac 10621185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 1179914 - 1180040
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||||  ||||| |||| || ||| |||||||| ||||| |||| |||| |||||| |||    
T  1179914 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattacca 1180013  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||| | |||||||||||| ||||    
T  1180014 cctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 285 - 414
Target Start/End: Original strand, 20074915 - 20075036
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    ||||||||||||||||| ||| |||| ||||| ||||||||||| ||||||||||| |        | |||||||||||| |||| |||  |||||||||    
T  20074915 ctaggaagagagaagagaagaggaaagagaaagtgtgcttgtgcagggtccacgtgtc--------acatttttatgtgggtgtcaaagagtgtattgcc 20075006  T
Q  385 acctaaggatatctatgtatcataactcat 414  Q
    |||||||||| |||||||||||| ||||||    
T  20075007 acctaaggatgtctatgtatcattactcat 20075036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 42221695 - 42221515
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||| ||| ||  ||||||||| |||||||| ||||||||||| ||     ||||||||||||| |||| |||| ||||| |||||||||  |||    
T  42221695 aaaatgttatataaacatcctttatttacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtatggg 42221596  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||  |||  || ||| |||||||| ||||| |||||| |  ||||||| ||||||||||| | |||||||||| ||||    
T  42221595 gtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 9122311 - 9122233
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtgg 364  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||||| |||||||||| |||||| |||||||| |||||    
T  9122311 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgg 9122233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 44507061 - 44507187
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||| ||||  ||| ||||| | ||||||| ||||||||||||||| || ||| |||||||| ||||| |||  |||  |||||| |||    
T  44507061 taggaagagagaagatgagagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattacca 44507160  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||| | |||||||||||| ||||    
T  44507161 cctaagggtgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 14055609 - 14055692
Alignment:
Q  329 ggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||||||||||| |||||| |||||||| |||||||||| | |  ||||||| ||||||||| | || ||||||||||||||    
T  14055609 ggggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 293 - 415
Target Start/End: Complemental strand, 38229547 - 38229426
Alignment:
Q  293 agagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaagg 392  Q
    ||||||||| ||| |||| ||||||||||||||| | |  ||||||||||||||||| |||||||| ||||| ||| || |   |||||||||||||||     
T  38229547 agagaagagaagaggaaagagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgt-caggagcgtattgccacctaaga 38229449  T
Q  393 atatctatgtatcataactcatt 415  Q
     | |  |||||||||||||||||    
T  38229448 gtgttcatgtatcataactcatt 38229426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 40467880 - 40467755
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||||  ||||| |  |||||||||||      |||||||||||||||| |||| |||| ||||| ||||||||||||      
T  40467880 aaaatgttacatagacaccttttatccccataaatttttgtacaccccatagactaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcgaa 40467781  T
Q  332 gtccacgtgaccacatgttagatttt 357  Q
    |||||||||  ||||||| |||||||    
T  40467780 gtccacgtggtcacatgtcagatttt 40467755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 412
Target Start/End: Complemental strand, 17443949 - 17443825
Alignment:
Q  288 ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacc 387  Q
    |||||||||||||| ||| |||| ||||| |||  ||||| ||||||||| |||| |||||| |||||||| ||||  |||  |    ||||||| ||||    
T  17443949 ggaagagagaagagaagatgaaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacc 17443850  T
Q  388 taaggatatctatgtatcataactc 412  Q
    ||||| | |||||||||||||||||    
T  17443849 taaggttgtctatgtatcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 336
Target Start/End: Original strand, 32707923 - 32708029
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtg--cttgtgcg 329  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||  |     ||||||||||||||| |||||||| ||||| ||||  ||||||||    
T  32707923 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtgtacttgtgcg 32708022  T
Q  330 gggtcca 336  Q
    |||||||    
T  32708023 gggtcca 32708029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 369
Target Start/End: Original strand, 42354508 - 42354645
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||  |||||||| || |||||||      ||||||||||||||||| ||| |||| ||||| ||||||| || | |    
T  42354508 aaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgcttatgtgag 42354607  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtc 369  Q
     ||||| ||| ||| ||| ||||||||||  |||||||    
T  42354608 atccacatgaacacgtgtcagatttttataaggatgtc 42354645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 412
Target Start/End: Complemental strand, 25838233 - 25838197
Alignment:
Q  376 tgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||||||||||||||||||| |||||||||||    
T  25838233 tgtattgccacctaaggatatctatttatcataactc 25838197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 412
Target Start/End: Complemental strand, 24307699 - 24307629
Alignment:
Q  342 ccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||| | |||||||| ||||| |||| | || ||||||||||||||||| | | |||||||||||||||    
T  24307699 ccacatatcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactc 24307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 9e-50; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 50052348 - 50052528
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| |     ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  50052348 aaaatgttacatagacaccctttattcccatacacctttgtacaccttatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcggg 50052447  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||||||| |||||||||||| ||||    
T  50052448 gtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 50052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 29240066 - 29239886
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| ||||||||| ||||||||  ||||||||||      ||||||||||||||||||||| |||| ||||| |||||||||| |||    
T  29240066 aaaatgttacatagacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgtggg 29239967  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||||| || |||||||||||| |||||||||| || | ||||||||||||||||| | |||||||||||| ||||    
T  29239966 gtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 237 - 413
Target Start/End: Original strand, 50526091 - 50526272
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || ||||||||||| ||||||| ||||||||||      ||||||||||||||||||||| ||||||||||  ||||||||||||     
T  50526091 aaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagcgtgcttgtgcgga 50526190  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
     ||||||||||||| ||| |||||||| ||||| |||| |||| ||||||||||||||| ||| |||||||||||| |||||    
T  50526191 atccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactca 50526272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 41236525 - 41236347
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||||||  |     |||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  41236525 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 41236426  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||| |||||||||| || | ||||||||||||||||| | |||||||||||| ||||    
T  41236425 ccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 239 - 412
Target Start/End: Original strand, 42044289 - 42044467
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||||||||||||| ||||||| ||  |     |||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  42044289 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 42044388  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||| ||||| ||| ||||| ||||||||||||||||| | |||||||||||| ||||    
T  42044389 ccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactc 42044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 286 - 413
Target Start/End: Complemental strand, 6034170 - 6034043
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||||| |||||||||| |||||| |||||||| ||||| |||| |||| ||||||||||    
T  6034170 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgcca 6034071  T
Q  386 cctaaggatatctatgtatcataactca 413  Q
    ||||||| | |||||||||||| |||||    
T  6034070 cctaagggtgtctatgtatcattactca 6034043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 257 - 413
Target Start/End: Original strand, 11511402 - 11511563
Alignment:
Q  257 tttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgtta 351  Q
    |||||||||||||||| |||||||||     |  || ||||||||||||| |||  ||| ||||| ||||||||||||||||||||||||| || ||| |    
T  11511402 tttatttccatacacccttgtacacctcatgcattaagaagagagaagagaagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtca 11511501  T
Q  352 gatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    ||||||||||||| |||| |||| ||||||||||||||||| | |||||||||||| |||||    
T  11511502 gatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 11511563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 55475371 - 55475191
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||  |     ||||||||||||||| |||||||| ||||| ||| ||| ||| ||    
T  55475371 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgcagg 55475272  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||  || |||||||| |||||||| ||||| |||| |||| ||||||||||||||||||| | |||||||||||||||    
T  55475271 gtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 258 - 412
Target Start/End: Original strand, 480388 - 480547
Alignment:
Q  258 ttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttag 352  Q
    ||||||||||||||||||||||||||  |     |||||||||||||||||||  ||| ||||| ||||||||| ||||||||||||||| || ||| ||    
T  480388 ttatttccatacacctttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcag 480487  T
Q  353 atttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||| ||||| |||| |||| ||||||| ||||||||| | |||||||||||| ||||    
T  480488 atttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 239 - 392
Target Start/End: Original strand, 24995029 - 24995187
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||||||  |     | |||||||||||||||||  ||| ||||||||||||||||||||||    
T  24995029 aatgatacatagacaccctttattcccatacaccattgtacaccccatgcattaagaagagagaagaggagagaaaagagaaaatgtgcttgtgcggggt 24995128  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaagg 392  Q
    ||||||||| || ||| | |||||||||||| |||| |||| |||||||||| ||||||    
T  24995129 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagg 24995187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 239 - 412
Target Start/End: Original strand, 48182971 - 48183149
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| |||||||||  |||||||| ||||||||||  |     | |||||||||||||||||  ||| ||||| ||||||||||||||||    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 48183070  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||| ||||| | |||||||||||| ||||    
T  48183071 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 19670636 - 19670816
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||  |     ||||||||||||||| |||||||| ||||| ||| ||||||||||    
T  19670636 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 19670735  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||  || |||||||| |||||||| ||||  |||| | || ||||||||||||||||| | | |||||||||||||||    
T  19670736 gtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 48647646 - 48647826
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||||||  | |||||||  ||||| |||||||||  ||     ||||||||||||||||||||| |||| ||||| |||||||||||||     
T  48647646 aaaatgttacatagacatcatttatttttatacatctttgtacattctatgcactaggaagagagaagaggagaggaaagagaaattgtgcttgtgcgga 48647745  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||||||||||| |||||||||||||||||| |||  |  | |||||||  |||||||||| | ||||| |||||||||    
T  48647746 gtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataactc 48647826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 286 - 413
Target Start/End: Original strand, 54473507 - 54473634
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| | ||| ||||||||||||||||||||||||| || |||||||||||| ||||| |||| || | ||||||| ||    
T  54473507 taggaagagagaagaggagagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtca 54473606  T
Q  386 cctaaggatatctatgtatcataactca 413  Q
    ||||||| | |||||||||||| |||||    
T  54473607 cctaagggtgtctatgtatcattactca 54473634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 8343137 - 8343263
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||||||| ||||| | | ||| |||||||||||  || |||||||| |||||||||||| | |||| |||| ||||||||||    
T  8343137 taggaagagagaagagaagaagaaagagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgcca 8343236  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||||| | |||||||||||||||    
T  8343237 cctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 286 - 412
Target Start/End: Complemental strand, 47986334 - 47986208
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| | |||||| ||||| ||| |||||||||||||||  || |||||||| |||||||| |||||||||| | || ||||||||||    
T  47986334 taggaagagagaagagaataagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgcca 47986235  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||| | | |||||||||||||||    
T  47986234 cctaagggtgtttatgtatcataactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 29547879 - 29548059
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||  |     ||||||||||||||| |||||||| | ||| ||| ||| ||||||    
T  29547879 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagaaaaagtgtacttatgcggg 29547978  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
     ||||  || |||||||| |||||||| ||||| |||| | || ||||||||||||||||||| | |||||||||||||||    
T  29547979 atccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 29548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 413
Target Start/End: Complemental strand, 31910372 - 31910191
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||||| ||||||||  ||||||| ||  ||     ||||||||||||| ||||  ||| ||||| ||||||||||||||    
T  31910372 aaaatgttacatagacaccatttattcccatacactcttgtacatcccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgcggg 31910273  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    ||||| ||| | |  ||| |||||||| ||||| |||| |||  ||||||| ||||||||||| ||||||||||||||||||    
T  31910272 gtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactca 31910191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 416
Target Start/End: Complemental strand, 40574959 - 40574775
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||| |||||| || ||||||  |||||||| ||||||||||  ||     ||||||||||||||||||  ||| ||||| ||||||||| ||||    
T  40574959 aaaatgttagatagacaccttttattctcatacacccttgtacaccccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgttcggg 40574860  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcattg 416  Q
     |||| ||  |  | ||| |||||||| ||||| |||| |||| |||||| |||||||||||| |||||||||||||||||||||    
T  40574859 atccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactcattg 40574775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 239 - 408
Target Start/End: Original strand, 53352496 - 53352661
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacg 338  Q
    |||| ||||||||| |||||||||| |||||||| |||||||||   ||||||||||||||||||||  ||| ||||| | ||||||||||||||||||     
T  53352496 aatgatacatagacaccctttattttcatacacccttgtacacc---taggaagagagaagaggagagaaaagagaaagtatgcttgtgcggggtccact 53352592  T
Q  339 tgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcata 408  Q
    | || || ||| |||||||| ||| | |||  |||  ||||||| ||||||||| | |||||||||||||    
T  53352593 taactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcata 53352661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 17983717 - 17983823
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||||||| ||||| ||| |||||||||||||||  || |||||||| |||||||| ||||| |||| | || ||||||||||    
T  17983717 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 17983816  T
Q  386 cctaagg 392  Q
    |||||||    
T  17983817 cctaagg 17983823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 29234219 - 29234345
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||| || ||| |||||||| ||  | | || |||| ||||||||||    
T  29234219 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgcca 29234318  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
     |||||| | |||||||||||| ||||    
T  29234319 tctaagggtgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 50813866 - 50813992
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||||||| ||||| ||| |||||||||||| ||  ||||||||||| |||||||| ||||| |||| | || |||||| |||    
T  50813866 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattacca 50813965  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||  | | |||||||||||||||    
T  50813966 cctaagagtgtttatgtatcataactc 50813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 286 - 414
Target Start/End: Original strand, 18924469 - 18924597
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||||||| ||||| ||| ||||||||| || ||  |  |||||||| |||||||| ||||||| || | || ||||||||||    
T  18924469 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggagttcatattgccacatgtcagatttttgtgtggatatcaaggggtgtattgcca 18924568  T
Q  386 cctaaggatatctatgtatcataactcat 414  Q
    ||||||| ||| |||| ||||||||||||    
T  18924569 cctaagggtatttatggatcataactcat 18924597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 285 - 415
Target Start/End: Complemental strand, 3481781 - 3481651
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    |||| ||||||||||| | || |||| ||||| |||||||||| |||||||||||||| |  ||| |||||||| ||||| |||| |||  |||||||||    
T  3481781 ctagaaagagagaagatgggaggaaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgcc 3481682  T
Q  385 acctaaggatatctatgtatcataactcatt 415  Q
    |||||| | | |||||||||||| |||||||    
T  3481681 acctaaaggtgtctatgtatcattactcatt 3481651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 44536720 - 44536845
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||||||| ||||| ||| ||| || |||||| |  ||||||||||| |||||||| ||||||||| ||||| ||||||||||    
T  44536720 taggaagagagaagagaagaagaaagagaaagtgtacttatgtggggtctatatgaccacatgtcagatttttgtgtggatgt-caagggtgtattgcca 44536818  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    |||||   | | |||||||||||||||    
T  44536819 cctaaaagtgtttatgtatcataactc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 364
Target Start/End: Complemental strand, 41824062 - 41823930
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||  ||||||||||||||||||     |  ||||||||||||||| ||||  ||| ||||| ||||||||||||||    
T  41824062 aaaatgttacatagacaccatttattctcatacacctttgtacacctcatgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggg 41823963  T
Q  332 gtccacgtgaccacatgttagatttttatgtgg 364  Q
    ||||| ||||| || ||| |||||||| |||||    
T  41823962 gtccatgtgactacgtgtcagatttttgtgtgg 41823930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 32767138 - 32766958
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| |  |||| || |||||||| |||||||| || |     || |||||||| ||| |||||||| ||||| ||| ||||||| ||    
T  32767138 aaaatgttacatagacacattttaattgcatacacccttgtacactctatgtattagaaagagagaggagaagaagaaagagaaagtgtacttgtgcagg 32767039  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||  || |||||||| |||||||| | ||| |||| | || ||||||||||||||||  | | |||||||||||||||    
T  32767038 gtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactc 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 55079687 - 55079814
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcgggg-tccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    |||||||||||||||| |||||||| ||||| ||| |||||| |||| ||||  || |||||||| |||||||| | ||| |||| |  | |||||||||    
T  55079687 taggaagagagaagagaagaagaaagagaaagtgtacttgtgtgggggtccatatggccacatgtcagatttttgtatgggtgtcaagaggtgtattgcc 55079786  T
Q  385 acctaaggatatctatgtatcataactc 412  Q
    |||||||| | | |||||||||||||||    
T  55079787 acctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 286 - 412
Target Start/End: Complemental strand, 23608361 - 23608235
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||||||||| || || |||||||| || ||| |||||||| ||||| |||| || | ||||||| ||    
T  23608361 taggaagagagaagaggagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtca 23608262  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
     |||||| | ||||| |||||| ||||    
T  23608261 tctaagggtgtctatatatcattactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 412
Target Start/End: Original strand, 28480241 - 28480368
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    ||||||||||||||||||||| |||  ||||| |||| ||||| ||||||||| |||| |||||| |||||||| ||||  |||  |    ||||||| |    
T  28480241 ctaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtc 28480340  T
Q  385 acctaaggatatctatgtatcataactc 412  Q
    |||||||| | ||||||||| |||||||    
T  28480341 acctaaggttgtctatgtattataactc 28480368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 412
Target Start/End: Original strand, 28481116 - 28481243
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    ||||||||||||||||||||| |||  ||||| |||| ||||| ||||||||| |||| |||||| |||||||| ||||  |||  |    ||||||| |    
T  28481116 ctaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtc 28481215  T
Q  385 acctaaggatatctatgtatcataactc 412  Q
    |||||||| | ||||||||| |||||||    
T  28481216 acctaaggttgtctatgtattataactc 28481243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 412
Target Start/End: Original strand, 28481991 - 28482118
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    ||||||||||||||||||||| |||  ||||| |||| ||||| ||||||||| |||| |||||| |||||||| ||||  |||  |    ||||||| |    
T  28481991 ctaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtc 28482090  T
Q  385 acctaaggatatctatgtatcataactc 412  Q
    |||||||| | ||||||||| |||||||    
T  28482091 acctaaggttgtctatgtattataactc 28482118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 286 - 383
Target Start/End: Original strand, 29589714 - 29589811
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgc 383  Q
    |||||||||||||||| |||||||| ||||| ||| |||||| ||||||||  || |||||| | |||||||| ||||| |||| | || ||||||||    
T  29589714 taggaagagagaagagaagaagaaagagaaagtgtacttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattgc 29589811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 290 - 369
Target Start/End: Original strand, 56300143 - 56300222
Alignment:
Q  290 aagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtc 369  Q
    |||||||||||||||| |||| ||||| |||| |||||| || | ||  ||||||||||| |||||||| ||||||||||    
T  56300143 aagagagaagaggagaggaaagagaaagtgtgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtc 56300222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 412
Target Start/End: Complemental strand, 29978006 - 29977885
Alignment:
Q  291 agagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaa 390  Q
    ||||| ||||| ||| |||| ||||| |||||||||| ||||||||  |||| || ||| |||||||| ||||| |||  | || ||||||||||||||     
T  29978006 agagaaaagagaagatgaaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctat 29977907  T
Q  391 ggatatctatgtatcataactc 412  Q
    || | | |||||||||| ||||    
T  29977906 ggttctgtatgtatcattactc 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 237 - 406
Target Start/End: Complemental strand, 3440159 - 3439985
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||     |||| |||||||||||||||| |||| ||||||||||||||||||||    
T  3440159 aaaatgttacatagacaccctttatttccatacacctttgtacaccctatattctagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 3440060  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatca 406  Q
    |||||||| | |||||||||||||||| ||||| |||||| |  ||||||||||||||||| | |||| ||||||    
T  3440059 gtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 20700995 - 20700815
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||||||      ||||||||||||||||||||| |||| ||||| ||||||| ||||||    
T  20700995 aaaatgttacatagacaccctttattcccatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttatgcggg 20700896  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||||| || ||| |||||||| ||| |  ||| |||| ||||||||||| ||||||| |||||||||||| ||||    
T  20700895 gtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 237 - 414
Target Start/End: Original strand, 40613822 - 40614004
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctctag-----gaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||||||  ||      ||||| |||| ||||||  ||| ||||| ||||||||||||||    
T  40613822 aaaatgttacatagacaccctttattcccatacacccttgtacaccccatacattatgaagaaagaataggagagaaaagagaaagtgtgcttgtgcggg 40613921  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcat 414  Q
    ||||| ||| |||| ||| |||||||| ||||| |||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  40613922 gtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactcat 40614004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 237 - 369
Target Start/End: Complemental strand, 3738123 - 3737986
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||||     ||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  3738123 aaaatgttacatagacaccctatattttcatacacctttgtacaccctatattctaggaagaaagaagaggagaggaaaaagaaaatgtgcttgtgcggg 3738024  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtc 369  Q
    |||||| ||||||||||| |||||||| ||||| ||||    
T  3738023 gtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 239 - 407
Target Start/End: Complemental strand, 28863633 - 28863460
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||||| |||||||||     |  ||||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  28863633 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 28863534  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcat 407  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||||| | ||||||||||||    
T  28863533 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 28863460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 26891424 - 26891604
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || ||||| |||| ||||||| ||| |||||||| ||     |||||||||||||| ||| |||| ||||||||||||||| || |    
T  26891424 aaaatgttacatatacacccttaattttcatacacatttttacaccctgtatattaggaagagagaagagaagaggaaagagaaaatgtgcttgttcgag 26891523  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||||||||||||||| |||||||| ||||| |||| | || ||||||||||||||||| |  ||||||||||||||||    
T  26891524 gtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 33436074 - 33436200
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||| |||| |||| ||||| ||||||||||||||||||||||||| || |||||||||||| ||||| |||| |||| ||||||||||    
T  33436074 taggaagagagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgcca 33436173  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||| | |||||||||||| ||||    
T  33436174 cctaagggtgtctatgtatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 239 - 415
Target Start/End: Complemental strand, 13438521 - 13438340
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||| | ||||||||||  |     |||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  13438521 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 13438422  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcatt 415  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| ||||||| ||||||||| | |||||||||||| |||||||    
T  13438421 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattactcatt 13438340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 42257373 - 42257193
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||| |||||||||| ||||||||||| ||||||  ||||||||||  ||     |||||| |||||||||||  ||| ||||| ||||||||||||||    
T  42257373 aaaatattacatagacaccctttatttctatacactcttgtacaccccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgcggg 42257274  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||| ||| |||| ||| |||||||||||||| |||| || | ||||||||||||||| ||| |||||||||||||||||    
T  42257273 gtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 17473198 - 17473020
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||||| |||||||||     |  ||||||||||||||||||||  ||| ||||| |||||||||||||| |    
T  17473198 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 17473099  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| |||||||||| |||||| | |||||||||||| ||||    
T  17473098 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 239 - 407
Target Start/End: Original strand, 19930742 - 19930915
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| || |||||| ||||||||| |||||||||     |  ||||||||||||||||||||  ||| ||||| |||| |||||||||||    
T  19930742 aatgatacatagacaccttttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 19930841  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcat 407  Q
    |||| |||| || ||| |||||||| |||||||||| |||| ||||||||||||||||| | ||||||||||||    
T  19930842 ccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcat 19930915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 286 - 413
Target Start/End: Original strand, 17819978 - 17820105
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||||||| |||| |||||||||| ||||| ||||||||||| ||||||||| |||||||| ||||| |||| | || ||||||||||    
T  17819978 taggaagagagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 17820077  T
Q  386 cctaaggatatctatgtatcataactca 413  Q
    ||||  | | ||||||||||||||||||    
T  17820078 cctatagttgtctatgtatcataactca 17820105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 237 - 415
Target Start/End: Complemental strand, 43490301 - 43490118
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||| |     ||||||||||||||| |||||||| | ||| ||| ||||||||||    
T  43490301 aaaatgttacatagacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagataaagtgtacttgtgcggg 43490202  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcatt 415  Q
    |||||  || |||||||| |||||||| ||||| |||| | || ||||||| ||||||||| | | ||||||||||||||||||    
T  43490201 gtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactcatt 43490118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 239 - 412
Target Start/End: Original strand, 7465657 - 7465835
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||||| |||||||||     |  ||||||||||||||| ||||  ||| ||||| |||||||||| |||||    
T  7465657 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaagagataaaagagaaagtgtgcttgtgtggggt 7465756  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| |||||||||| |||||| | |||||||||||| ||||    
T  7465757 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 286 - 412
Target Start/End: Complemental strand, 9058606 - 9058480
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||||||||||| |||| || ||| |||||||| ||||| |||| |||| ||||||||||    
T  9058606 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 9058507  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||| | |||||||||||| ||||    
T  9058506 cctaagggtgtctatgtatcattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 30915641 - 30915463
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| |||||||||  || ||||||||||||||| ||||||||||  |     |||||||||||||| ||||  ||| ||||| ||||||||| ||||||    
T  30915641 aatgatacatagacatccattatttccatacacccttgtacaccccatgtattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 30915542  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| ||||||||||||||  ||| |||| ||||||||||||||||| | |||||||||||| ||||    
T  30915541 ccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 289 - 412
Target Start/End: Original strand, 32505625 - 32505748
Alignment:
Q  289 gaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacct 388  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||||| || ||| |||||||| ||||| |||| || | ||||||| |||||    
T  32505625 gaagagagaagaggagagaaaatagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacct 32505724  T
Q  389 aaggatatctatgtatcataactc 412  Q
    |||| | |||||||||||| ||||    
T  32505725 aagggtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 239 - 413
Target Start/End: Complemental strand, 40701656 - 40701477
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| || |||||||||||||||| ||||||||||  |     |||||||||||||| ||||  ||| ||||| |||| |||||||||||    
T  40701656 aatgatacatagacaccttttatttccatacacccttgtacacccgatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 40701557  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    |||||| || || ||| |||||||| ||||| |||| || | ||||||||||||||||| | |||||||||||| |||||    
T  40701556 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactca 40701477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 239 - 412
Target Start/End: Original strand, 10249304 - 10249482
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| |||||||||  |||||||| ||||||||||  |     ||||||||| |||||||||  ||| ||||| ||||||||||||||||    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 10249403  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||| ||||| |||| || | ||||||| ||||||||| | |||||||||||| ||||    
T  10249404 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 45097709 - 45097835
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||||||| ||||| ||| |||||||||||||||  || |||||||| |||||||| | ||| |||| | || ||||||||||    
T  45097709 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgcca 45097808  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||||| | |||||||||||||||    
T  45097809 cctaaggatgtttatgtatcataactc 45097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 2533303 - 2533124
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||| ||| || ||||||||| ||||||||| ||||||||||  ||     ||||||||||||||||||  ||| | ||| ||||||||||||||    
T  2533303 aaaatgttatatatacaccctttattcccatacacccttgtacaccccatacattgggaagagagaagaggagataaaagaaaaagtgtgcttgtgcggg 2533204  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||| | ||| | || ||| |||||||| ||||| |||| |||| ||||||||||| ||||||| |||||||||||||||||    
T  2533203 gtctatgtggctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaaggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 239 - 414
Target Start/End: Original strand, 28381577 - 28381757
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||| | ||||||||||  ||     ||||||||||||| ||||  ||| ||||| ||||||||||||| ||    
T  28381577 aatgatacatagacaccctttattcccatacatccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgcggagt 28381676  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcat 414  Q
    ||| ||||| || ||| |||||||| ||||| |||| || | ||||||||||||||||| | |||||||||||| ||||||    
T  28381677 ccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactcat 28381757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 286 - 412
Target Start/End: Complemental strand, 38732480 - 38732354
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||||||| ||||| ||| |||||||||||||||  ||||||||||| |||||||| ||||| |||| | || ||||||| ||    
T  38732480 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtca 38732381  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    | ||||| | | |||||||||||||||    
T  38732380 cataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 2997461 - 2997567
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||||||| ||||| ||| |||||||||||||||  || |||||||| |||||||| ||||| |||| | || ||||||||||    
T  2997461 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 2997560  T
Q  386 cctaagg 392  Q
    |||||||    
T  2997561 cctaagg 2997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 286 - 407
Target Start/End: Complemental strand, 41575264 - 41575142
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgc-ggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    ||||| |||||||||||||| |||| ||||| ||||||||||  ||||||||| ||||||||||| | |||||| |||| ||||| |||| |||||| ||    
T  41575264 taggacgagagaagaggagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattacc 41575165  T
Q  385 acctaaggatatctatgtatcat 407  Q
    | |||||||| ||||||||||||    
T  41575164 atctaaggatgtctatgtatcat 41575142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 257 - 413
Target Start/End: Complemental strand, 4060845 - 4060684
Alignment:
Q  257 tttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgtta 351  Q
    |||||||||||||||| ||||||||||  |     |||||||||||||| ||||  ||| ||||| ||||||| |||||| ||||||| || || ||| |    
T  4060845 tttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaaaagaaagtgtgcttatgcgggatccacgtaactacgtgtca 4060746  T
Q  352 gatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    ||||||| |||||||||| || | ||||||| ||||||||| | |||||||||||| |||||    
T  4060745 gatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactca 4060684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 306 - 415
Target Start/End: Complemental strand, 27864810 - 27864701
Alignment:
Q  306 agaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatc 405  Q
    ||||| ||||| ||||||| ||||||||||||||||  || ||| |||||||| |||||||||| |||| ||||||||||| ||||| | ||||||||||    
T  27864810 agaaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatc 27864711  T
Q  406 ataactcatt 415  Q
    || |||||||    
T  27864710 attactcatt 27864701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 312 - 412
Target Start/End: Original strand, 5574488 - 5574588
Alignment:
Q  312 agaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataact 411  Q
    ||||| |||||||||||||| |||||||||| || ||| |||||||||||||| |||| |||| ||||||||||||||||  | |||||||||||| |||    
T  5574488 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattact 5574587  T
Q  412 c 412  Q
    |    
T  5574588 c 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 285 - 412
Target Start/End: Complemental strand, 33436338 - 33436211
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    ||||||||||||||||||| | |||| ||||| |||||||||||   |||||| ||  ||| ||| |||||||||||||| |||| || | |||||||||    
T  33436338 ctaggaagagagaagaggataggaaagagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgcc 33436239  T
Q  385 acctaaggatatctatgtatcataactc 412  Q
    | |||||||| |||||||||||| ||||    
T  33436238 atctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 38273116 - 38273242
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||| ||||||  ||| ||||| |||||| |||||||||||| ||| | || ||| |||||||| ||||| |||  |||| ||||||||||    
T  38273116 taggaagagagaataggagagaaaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgcca 38273215  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
     ||||| || |||||||||||||||||    
T  38273216 tctaagaatgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 36169016 - 36168836
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || |||||||||  |||||||  ||||||||||  ||     ||||||||||| ||||||  ||| ||||| | ||||||||||||    
T  36169016 aaaatgttacataaacaccctttattctcatacactcttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtatgcttgtgcggg 36168917  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||| ||| |||| ||| | |||||| |||||  ||  |||| ||||||| || |||||||| |||||||||||||||||    
T  36168916 gtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 358
Target Start/End: Original strand, 3034903 - 3035029
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctc------taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcgg 330  Q
    |||||||||||||||| || |||| || |||||||||| ||||||| ||      |||||||||||||||| |||||||| ||||| | | |||||||||    
T  3034903 aaaatgttacatagacaccttttaattgcatacaccttggtacacc-tcatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcgg 3035001  T
Q  331 ggtccacgtgaccacatgttagattttt 358  Q
    ||||||  ||||||||||| ||||||||    
T  3035002 ggtccatatgaccacatgtcagattttt 3035029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 392
Target Start/End: Complemental strand, 13365533 - 13365373
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || ||| |||| ||||||||||  |     ||||||||||||||| |||||||| ||||| ||| ||||||||||    
T  13365533 aaaatgttacatagacaccttttaattgcattcacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 13365434  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaagg 392  Q
    |||||  ||  ||||||| |||||||| ||||| |||| | || | |||||||| ||||||    
T  13365433 gtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagg 13365373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 38882831 - 38882913
Alignment:
Q  329 ggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||||||||||| || ||| |||||||| |||||||||| |||| | ||||||||||||||| | |||||||||||| ||||    
T  38882831 ggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 336
Target Start/End: Complemental strand, 17823968 - 17823864
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||||||  ||||||||| |||||||| ||||||||||  ||     ||||||||||||| |||| |||| ||||| |||||||||  |||    
T  17823968 aaaatgttacatagacatcctttatttacatacacccttgtacaccccatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtatggg 17823869  T
Q  332 gtcca 336  Q
    |||||    
T  17823868 gtcca 17823864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 285 - 412
Target Start/End: Original strand, 15428713 - 15428840
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    |||| |||||| ||||||||| |||| |||||||||| ||| | |||||  || || |||||||| |||||||| ||||  |||  | || ||||| |||    
T  15428713 ctagaaagagaaaagaggagatgaaagagaaaatgtgtttgcgtggggtttacatggccacatgtcagatttttgtgtgagtgttaaggggtgtatggcc 15428812  T
Q  385 acctaaggatatctatgtatcataactc 412  Q
    || ||||||| | |||||||||||||||    
T  15428813 acataaggatgtttatgtatcataactc 15428840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 44152053 - 44152012
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtg 327  Q
    |||||||||||||||||||| |||| ||||| ||||||||||    
T  44152053 taggaagagagaagaggagatgaaagagaaagtgtgcttgtg 44152012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 237 - 414
Target Start/End: Complemental strand, 30870193 - 30870018
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||| |||||| |||||||||| ||||||||||||||||||||     |||| |||||||||||||||| |||| ||||||||||||||||||||    
T  30870193 aaaatgtta-atagacaccctttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 30870095  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcat 414  Q
    ||||| ||||||||||||||||||||||| ||| |||      |||| || ||| |||||||||||| |||||||||||||||    
T  30870094 gtccatgtgaccacatgttagatttttatatgggtgt------ttgttttaccatctaaggatatctgtgtatcataactcat 30870018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 239 - 415
Target Start/End: Complemental strand, 17598732 - 17598551
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| || |||||||||||||||| ||||||||||  |     |||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  17598732 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 17598633  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcatt 415  Q
    ||||||||| || ||| |||||||| ||||| |||| || | ||||||||||||||||| | |||||||||||| |||||||    
T  17598632 ccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattactcatt 17598551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 31976428 - 31976248
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||  |||||||| ||||||||||  ||     ||||||||||||||||||  ||| ||||| ||||||||||||||    
T  31976428 aaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggg 31976329  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    || || |||||||| ||| |||||||| ||||| |||  |||| | ||||||||||||||||| |||||||||||||||||    
T  31976328 gttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 239 - 414
Target Start/End: Complemental strand, 32869856 - 32869676
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||| | ||||||||||  |     |||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  32869856 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32869757  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcat 414  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||||| | |||||||||| | ||||||    
T  32869756 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctttactcat 32869676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 15989962 - 15990142
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||  ||     |||||||||||||| |||||||| ||||| ||| ||||||||||    
T  15989962 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 15990061  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||  || |||||||| |||||||| ||||| |||| | || ||||||||||||||||| | | |||||||||||||||    
T  15990062 gtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 30341280 - 30341460
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||  ||     |||||||||||||| |||||||| ||||| ||| ||||||||||    
T  30341280 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 30341379  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||  || |||||||| |||||||| ||||| |||| | || ||||||||||||||||| | | |||||||||||||||    
T  30341380 gtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 237 - 413
Target Start/End: Original strand, 15507944 - 15508125
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||| | ||||||||||  ||     |||||||||||||| |||||||| ||||| ||| ||||||||||    
T  15507944 aaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 15508043  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    |||||  || |||||||| |||||||| ||||| |||| | || ||||||||||||||||| | | ||||||||||||||||    
T  15508044 gtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactca 15508125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 286 - 407
Target Start/End: Original strand, 22880632 - 22880753
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||| || ||| ||| |||| ||||| |||| |||| ||||||||||    
T  22880632 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgcca 22880731  T
Q  386 cctaaggatatctatgtatcat 407  Q
    ||||||| | ||||||||||||    
T  22880732 cctaagggtgtctatgtatcat 22880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 31110681 - 31110859
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||  ||     |||||||||||||| |||  ||| ||||| ||||||||||| ||    
T  31110681 aaaatgttacatagacatcctttatttccatacacctttgtacaccccatacattaggaagagagaagagtagagaaaagagaaagtgtgcttgtgcagg 31110780  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||| |||   || ||| |||||||| || |  |||| |||| ||||||||||||||||||| |||||||||||||||||    
T  31110781 gtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 237 - 414
Target Start/End: Original strand, 31952950 - 31953132
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||  |||||| | || |||||||      ||||||||||||||||| ||| |||| ||||| |||| ||||| | |    
T  31952950 aaaatgttacatagacaccatttattctcatacatccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgtttgtgtgag 31953049  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcat 414  Q
    |||||| ||| ||||||| |||||||||||||| |||| | || ||||||||||||||||||| ||||| |||||| ||||||    
T  31953050 gtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactcat 31953132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 239 - 391
Target Start/End: Complemental strand, 11427796 - 11427639
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| |||||||||  |||||||| ||||||||||  |     |||||||||||||||||||  ||| ||||| |||||||||||||| |    
T  11427796 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 11427697  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaag 391  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||||    
T  11427696 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaag 11427639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 413
Target Start/End: Complemental strand, 4231728 - 4231547
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||  |     ||||||||||||||| |||||||| ||||| ||| ||||||||||    
T  4231728 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 4231629  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    |||||  || |||| ||| |||||||| ||||| || | | || ||||||||||||||| ||| | |||| |||||||||||    
T  4231628 gtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactca 4231547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 286 - 413
Target Start/End: Original strand, 31109374 - 31109501
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||| |||||||||  ||| ||||| ||| ||| ||||||||| ||||||| || ||| |||||||| |||||||||| |||| ||||||||||    
T  31109374 taggaagagaaaagaggagagaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgcca 31109473  T
Q  386 cctaaggatatctatgtatcataactca 413  Q
    ||||||| | |||||  ||||| |||||    
T  31109474 cctaagggtgtctattaatcattactca 31109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 6209439 - 6209565
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||||| |||||||||||||||||| || ||  |||||||| ||||  |||| ||   ||||||||||    
T  6209439 taggaagagagaagaggagagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgcca 6209538  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||| | |||||||||||| ||||    
T  6209539 cctaagggtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 407
Target Start/End: Original strand, 28536408 - 28536581
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||| |||  | ||||||| |||||||| ||||||||||  |     |||||||| |||||| |||  ||| ||||| |||||||||| |||    
T  28536408 aaaatgttacatcgacatcatttattttcatacacccttgtacaccccatgcagtaggaagagggaagagaagataaaagagaaagtgtgcttgtgtggg 28536507  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcat 407  Q
    |||||| |||||   ||| |||||||| ||||| |||| | |||||||||||||||||||||| | ||||||||||    
T  28536508 gtccacatgaccg--tgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcat 28536581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 12732661 - 12732482
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||||||  | ||||||||||||||  ||||| |||| |     |||| |||||||||||||||| |||| ||||||||||||| || |||    
T  12732661 aaaatgttacatagacatc-tttatttccatacatttttgtgcaccttatgtactagaaagagagaagaggagatgaaagagaaaatgtgcttatgtggg 12732563  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
     ||||| |  |||| ||| |||||||| ||||| |||| | | || ||||||||| |||| || |||||||||||| ||||    
T  12732562 atccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcattactc 12732482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 29858005 - 29857827
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| || |||||| ||||||||| ||||||||||  |     ||||||||||||||| |||  ||| ||||| ||||||| |||||| |    
T  29858005 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 29857906  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||| || || ||| |||||||| ||||| |||  || | |||||||||| |||| | | |||||||||||| ||||    
T  29857905 ccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 286 - 412
Target Start/End: Complemental strand, 15832703 - 15832577
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||| |||||||||||| ||| |||||||||  |||||| || |||||||||| || ||| | |||||| ||||| |||| || | | ||||| ||    
T  15832703 taggaagatagaagaggagaaaaaagagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtca 15832604  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||| | | |||||||||||| ||||    
T  15832603 cctaaaggtgtctatgtatcattactc 15832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 408
Target Start/End: Original strand, 9379686 - 9379808
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||| ||||| ||| |||| |||||||||| ||||| | | ||||| || |||| ||| | |||||| | ||| |||| | || ||||||| ||    
T  9379686 taggaagagaaaagagaagatgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtca 9379785  T
Q  386 cctaaggatatctatgtatcata 408  Q
     |||||||| |||||||||||||    
T  9379786 tctaaggatgtctatgtatcata 9379808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 405
Target Start/End: Complemental strand, 946502 - 946383
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||||| | ||||| |  ||||||| |  ||| ||||||||  || | |||| |||| ||||||  ||    
T  946502 taggaagagagaagaggagagaaaagagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatca 946403  T
Q  386 cctaaggatatctatgtatc 405  Q
    ||||||||| ||||||||||    
T  946402 cctaaggatgtctatgtatc 946383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 239 - 412
Target Start/End: Original strand, 10031 - 10209
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||| ||||||||||||||| ||||||||||| |     |||||||||||||||||||  ||| ||||| ||||||||| || |||    
T  10031 aatgatacatagacacccattatttccatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacgcggt 10130  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| ||||||||||||||||||| |||| ||||||||||||||| | | |||||||||||||||||    
T  10131 ccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataactc 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 8e-38; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 31009168 - 31008988
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||      ||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  31009168 aaaatgttacatagacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagagaagaggaaatagaaagtgtgcttgtgcggg 31009069  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
     |||||||||| || ||| |||||||| ||||| |||  |||  ||||||| ||||||||||| | |||||||||||||||    
T  31009068 atccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 239 - 415
Target Start/End: Complemental strand, 14831992 - 14831811
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||| | ||||||||||  |     |||||||||||||||||||| ||| ||||| |||||||||||||| |    
T  14831992 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagaaaaaaaagaaagtgtgcttgtgcgggat 14831893  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcatt 415  Q
    ||||||||| || ||| |||||||||||||| |||| |||| ||||||||||||||||  | |||||||||||| |||||||    
T  14831892 ccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcatt 14831811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 239 - 407
Target Start/End: Original strand, 18520806 - 18520979
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| |||||||||| |||||||| |||||||||     |  ||||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  18520806 aatgatacatagacaccctttattttcatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 18520905  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcat 407  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||||| | ||||||||||||    
T  18520906 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 18520979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 6679878 - 6679698
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||||||  | ||||||  |||||||| ||||||||||| ||     ||||||||||||||||||  ||| |||||||||| |||||||||    
T  6679878 aaaatgttacatagacatcatttattgtcatacacccttgtacaccctatacattaggaagagagaagaggagagaaaagagaaaatgtgtttgtgcggg 6679779  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||| |||||||| ||| |||||||| ||||| |||| || | ||||||||||||||| ||| |||||||||||||||||    
T  6679778 gtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 286 - 415
Target Start/End: Complemental strand, 28177901 - 28177772
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||| ||||||||||  ||| ||||| |||| |||||||||||||| |||||||| ||| |||||||| ||||| |||| |||| ||||||||||    
T  28177901 taggaagagggaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 28177802  T
Q  386 cctaaggatatctatgtatcataactcatt 415  Q
    ||||||||| ||||||||||||||||||||    
T  28177801 cctaaggatgtctatgtatcataactcatt 28177772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 2252088 - 2252268
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||  ||     |||||||||||||| |||||||| ||||| ||| ||||||||||    
T  2252088 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 2252187  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||  || |||||||| |||||||| ||||| |||| | || ||||||||||||||||||| | |||||||||||||||    
T  2252188 gtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 35943812 - 35943992
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| |  |||||||||||||||| ||||||||||      ||||||||||| ||||||||| |||| ||||| |||||||||| |||    
T  35943812 aaaatgttacatagacacattttatttccatacacccttgtacaccccatgcactaggaagagaaaagaggagaggaaagagaaagtgtgcttgtgtggg 35943911  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
     ||||||| || || ||| |||||||| ||||| |||| || | ||||||||||||||||| | |||||||||||||||||    
T  35943912 atccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 286 - 414
Target Start/End: Complemental strand, 40145533 - 40145405
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||| || ||| |||||||| |||||||||  |||| ||||||||||    
T  40145533 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgcca 40145434  T
Q  386 cctaaggatatctatgtatcataactcat 414  Q
    ||||||| | |||||||||||| ||||||    
T  40145433 cctaagggtgtctatgtatcattactcat 40145405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 2740452 - 2740274
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||| ||  |     ||||||||||||| |||||  ||| ||||| |||||||||||||| |    
T  2740452 aatgatacatagacaccctttattcccatacacccttgtacatcccatgcattaggaagagagaaggggagagaaaagagaaagtgtgcttgtgcgggat 2740353  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||||||| |||||||||||| ||||    
T  2740352 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 3921185 - 3921365
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||  ||     |||||||||||||| |||||||| ||||| ||| ||||||||||    
T  3921185 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 3921284  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||  || |||||||| |||||||| ||||| |||| | || ||||||||||||||||| | | |||||||||||||||    
T  3921285 gtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 247 - 412
Target Start/End: Original strand, 36732872 - 36733042
Alignment:
Q  247 atagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtga 341  Q
    |||||| ||||||||| ||||||||| |||||||||     |  ||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||    
T  36732872 atagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtga 36732971  T
Q  342 ccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    | |  ||| |||||||| ||||| |||| |||| |||||||| |||||||| | |||||||||||| ||||    
T  36732972 ctatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 15409530 - 15409710
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || |||||||||  |||||||| ||||||||||  ||     ||||||||||||||||||  ||| ||| | ||||||||||||||    
T  15409530 aaaatgttacataaacaccctttattcgcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagagagtgtgcttgtgcggg 15409629  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||| ||| | || ||| |||||||| ||||| |||| |||  ||||||| ||||||||||| |||||||||||||||||    
T  15409630 gtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 237 - 358
Target Start/End: Complemental strand, 21370184 - 21370058
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || |||||||||| |||||||||||||||| | |     ||||||||| |||||| |||| |||| |||||||||| |||||||||    
T  21370184 aaaatgttacataaacaccctttattttcatacacctttgtacatcttatatactaggaagaaagaagatgagaggaaagagaaaatgtgtttgtgcggg 21370085  T
Q  332 gtccacgtgaccacatgttagattttt 358  Q
    |||||||||||||||||| ||||||||    
T  21370084 gtccacgtgaccacatgtcagattttt 21370058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 286 - 414
Target Start/End: Original strand, 33149612 - 33149740
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||||| |||||||||| || ||| | |||||| ||||| |||| |||| |||||| |||    
T  33149612 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattacca 33149711  T
Q  386 cctaaggatatctatgtatcataactcat 414  Q
    ||||||| | |||||||||||| ||||||    
T  33149712 cctaagggtgtctatgtatcattactcat 33149740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 39688817 - 39688997
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||||||||||||||| |     ||||||||||||||  |||||||| ||||| ||| ||| ||||||    
T  39688817 aaaatgttacatagacaccttttaattgcatacacctttgtacaccctatgtattaggaagagagaagaaaagaagaaagagaaagtgtacttatgcggg 39688916  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    || ||  ||||||||| | |||||||| ||||| |||| | || ||||||||||| ||||| | | |||||||||||||||    
T  39688917 gttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactc 39688997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 286 - 405
Target Start/End: Complemental strand, 13811778 - 13811659
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||   || ||||| ||||||||||||||||||||||||| || ||| |||||||| ||||| |||| || | ||||||||||    
T  13811778 taggaagagagaagaggagagagaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgcca 13811679  T
Q  386 cctaaggatatctatgtatc 405  Q
    ||||||| | ||||||||||    
T  13811678 cctaagggtgtctatgtatc 13811659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 286 - 413
Target Start/End: Complemental strand, 26720642 - 26720515
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||  ||| ||||| |||||||||||||| |||| ||| |||| ||| |||||||| ||| | |||  |||| ||||||||||    
T  26720642 taggaagagagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgcca 26720543  T
Q  386 cctaaggatatctatgtatcataactca 413  Q
    ||||||||| ||||||||||||||||||    
T  26720542 cctaaggatgtctatgtatcataactca 26720515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 286 - 413
Target Start/End: Complemental strand, 26990391 - 26990264
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||  ||| ||||| |||||||||||||| |||| ||| |||| ||| |||||||| ||| | |||  |||| ||||||||||    
T  26990391 taggaagagagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgcca 26990292  T
Q  386 cctaaggatatctatgtatcataactca 413  Q
    ||||||||| ||||||||||||||||||    
T  26990291 cctaaggatgtctatgtatcataactca 26990264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 239 - 413
Target Start/End: Complemental strand, 35785377 - 35785198
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| || |||||||||||||||| ||||||||||  |     |||||||||||||| ||||  ||| ||||| |||| ||||||||| |    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcgggat 35785278  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    |||||| || || ||| |||||||| ||||| |||| || | ||||||||||||||||| | |||||||||||| |||||    
T  35785277 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactca 35785198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 285 - 412
Target Start/End: Original strand, 20073489 - 20073616
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||  ||| ||  |||||||||||||  |||| |||| ||||||| |    
T  20073489 ctaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtc 20073588  T
Q  385 acctaaggatatctatgtatcataactc 412  Q
    | |||| ||| ||||| |||||| ||||    
T  20073589 atctaatgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 286 - 415
Target Start/End: Original strand, 42414276 - 42414405
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||||| |  ||| | ||| |||||||||||||||||||| |||| || ||| |||||||| ||||| |||| |||| ||||||||||    
T  42414276 taggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 42414375  T
Q  386 cctaaggatatctatgtatcataactcatt 415  Q
    ||||  | | |||||||||||| |||||||    
T  42414376 cctactggtgtctatgtatcattactcatt 42414405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 286 - 407
Target Start/End: Original strand, 36875586 - 36875698
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||          |||||| ||||| |||| |||| ||||||||||    
T  36875586 taggaagagagaagaggagaaaaaagagaaagtgtgcttgtgcgggatccacgtgac---------tatttttgtgtgggtgtcaaagggtgtattgcca 36875676  T
Q  386 cctaaggatatctatgtatcat 407  Q
    ||||||| | ||||||||||||    
T  36875677 cctaagggtgtctatgtatcat 36875698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 407
Target Start/End: Complemental strand, 16328027 - 16327906
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||| ||||||||||| | | |||| | ||| |||||||||| | ||| ||| ||| ||| ||| |||||||||||||| |||| | || ||||||||||    
T  16328027 tagggagagagaagagaaaatgaaagaaaaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgcca 16327928  T
Q  386 cctaaggatatctatgtatcat 407  Q
    ||||||||||| ||| ||||||    
T  16327927 cctaaggatatttatctatcat 16327906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 340
Target Start/End: Complemental strand, 2177491 - 2177436
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtg 340  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||| ||||||||    
T  2177491 ctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgtgggatccacgtg 2177436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 412
Target Start/End: Original strand, 33825297 - 33825424
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    ||||||||||||||||| |||  ||| ||||| ||||||||||   ||| ||| ||| ||| ||| |||||||||||||| |||| | |  |||||||||    
T  33825297 ctaggaagagagaagagaagataaaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgcc 33825396  T
Q  385 acctaaggatatctatgtatcataactc 412  Q
    ||||||| || |||||| ||||| ||||    
T  33825397 acctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 291 - 413
Target Start/End: Original strand, 6259980 - 6260102
Alignment:
Q  291 agagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaa 390  Q
    ||||||||||||||| |||| ||||| ||||||| || | |||||| |||||||  ||||||||||||  |||| |||  |||| ||||||| ||||||     
T  6259980 agagagaagaggagatgaaagagaaagtgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctat 6260079  T
Q  391 ggatatctatgtatcataactca 413  Q
    || | | |||||||||| |||||    
T  6260080 ggttgtgtatgtatcattactca 6260102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 256 - 363
Target Start/End: Complemental strand, 25831446 - 25831334
Alignment:
Q  256 ctttatttccatacacctttgtacaccc--tc---taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgtt 350  Q
    |||||||||| |||||||||||| ||||  ||   ||| |||| | ||||||| | |||| |||||||||| ||||| ||||||||| ||||||| ||||    
T  25831446 ctttatttccctacacctttgtagaccccatccattagaaagaaaaaagaggatatgaaagagaaaatgtgtttgtgtggggtccacatgaccacgtgtt 25831347  T
Q  351 agatttttatgtg 363  Q
    |||||||| ||||    
T  25831346 agatttttttgtg 25831334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 404
Target Start/End: Original strand, 41470425 - 41470508
Alignment:
Q  321 gcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtat 404  Q
    |||||||||||||||||||||| || ||| |||||||||| || || |  |||| ||||||||||||||| | | |||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtat 41470508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 39557491 - 39557573
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgt 368  Q
    ||||||||||||||||||||  ||| ||||| |||| ||||  |||||||| |||| ||| ||| |||||||| |||||||||    
T  39557491 taggaagagagaagaggagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggatgt 39557573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 366
Target Start/End: Complemental strand, 31132436 - 31132390
Alignment:
Q  320 tgcttgtgcggggtccacgtgaccacatgttagatttttatgtggat 366  Q
    ||||||||||||||||||||||| || ||| |||||||| |||||||    
T  31132436 tgcttgtgcggggtccacgtgactacttgtcagatttttgtgtggat 31132390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 376 - 408
Target Start/End: Complemental strand, 10356670 - 10356638
Alignment:
Q  376 tgtattgccacctaaggatatctatgtatcata 408  Q
    ||||||||||||||||||| |||||||||||||    
T  10356670 tgtattgccacctaaggatgtctatgtatcata 10356638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 239 - 412
Target Start/End: Original strand, 8080305 - 8080483
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||||||  |     |||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  8080305 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 8080404  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||||||| | |||| |||| ||||||||||||||||| | |||||||||||| ||||    
T  8080405 ccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 239 - 414
Target Start/End: Complemental strand, 19330020 - 19329840
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||||||  |     |||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  19330020 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 19329921  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcat 414  Q
    ||||||||  || ||| |||||||| ||||| |||| || | ||||||||||||||||||| |||||||||||| ||||||    
T  19329920 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactcat 19329840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 38837395 - 38837217
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||||||||||||||||||| ||||||| ||  |     |||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  38837395 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 38837296  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||| ||| | ||| ||||| ||||||||||||||||| | |||||||||||| ||||    
T  38837295 ccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 12311084 - 12310906
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| ||||||||||||||||||||||||||| | |     ||||||||||||||||||| | |||| | ||||||||||||| | ||    
T  12311084 aaaatgttacatagacaccctttatttccatacacctttgtacatcttgtatactaggaagagagaagaggaaaggaaagataaaatgtgcttgttcagg 12310985  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
     ||||||||||||||||| |||||||| | ||||| ||||  | | |||| |||||||||| | |||||||||||||||||    
T  12310984 atccacgtgaccacatgtcagatttttgtatggatatcca--gatatatttccacctaagggtgtctatgtatcataactc 12310906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 237 - 412
Target Start/End: Original strand, 46033721 - 46033901
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||  |||||||| ||||||||||  ||     |||| |||||||||||||  ||| ||||||| |||||||||||     
T  46033721 aaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaatagagaagaggagagaaaagagaaaatatgcttgtgcgga 46033820  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    || || |||||||| ||| |||||||||||||| |||  |||| |||||||||||||||| ||||||||||||||||||||    
T  46033821 gttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 285 - 412
Target Start/End: Complemental strand, 36208300 - 36208173
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| || ||||| ||||| |||| | |  |||||| ||    
T  36208300 ctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattacc 36208201  T
Q  385 acctaaggatatctatgtatcataactc 412  Q
    |||||||| | |||||||||||||||||    
T  36208200 acctaagggtgtctatgtatcataactc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 286 - 415
Target Start/End: Complemental strand, 35137659 - 35137530
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||| |||||||||||||||||||| || |||||||||||| ||||| |||| |||| ||||||||||    
T  35137659 taggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgcca 35137560  T
Q  386 cctaaggatatctatgtatcataactcatt 415  Q
    ||||||| | ||||| |||||| |||||||    
T  35137559 cctaagggtgtctatttatcattactcatt 35137530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 415
Target Start/End: Complemental strand, 8238393 - 8238209
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||  |     ||||||||||||||| |||||||| ||||| ||| ||||||||||    
T  8238393 aaaatgttacatagacgccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 8238294  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccaccta-aggatatctatgtatcataactcatt 415  Q
    |||||  |||| |||||| |||||||| ||||| |||| |||| |||||||||||||| ||| | | ||||||||||||||||||    
T  8238293 gtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactcatt 8238209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 40846087 - 40846213
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||||||| ||||| |||  ||||||||||||||  | || ||||||||||||||| |||||||||| | || ||||||||||    
T  40846087 taggaagagagaagagaagaagaaagagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgcca 40846186  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||||| | |||||||||||||||    
T  40846187 cctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 237 - 413
Target Start/End: Complemental strand, 41423862 - 41423681
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || |||||||||  |||||||||||||||||||      ||||||||||||||||||||| |||| ||||||| ||||||| ||||    
T  41423862 aaaatgttacataaacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagaggagatgaaagagaaaatatgcttgtacggg 41423763  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
     || |||||||||||||| |||||||| |||   |||| |  | |||||| ||| |||| ||| ||||||||||||||||||    
T  41423762 atctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcataactca 41423681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 7728086 - 7727906
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||| | ||||||||||  ||     |||||||||||||| |||||||| ||||| ||| ||||||||||    
T  7728086 aaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaacagaaagtgtacttgtgcggg 7727987  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||  ||||||||||| ||||||||||||| ||||| |  | |||||| |||||||||| | | |||||||||||||||    
T  7727986 gtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataactc 7727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 18207359 - 18207180
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||| |||||  |||||||||  |||||||| |||||||| ||     ||||||||||||||||||||| |||| ||||| |||||||||| |||    
T  18207359 aaaatgttagatagataccctttattatcatacacccttgtacactctatccactaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtggg 18207260  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    || |||||| |||| |||||||||||| | ||| |||| |  | ||||||||||||||||| | |||||||||||||||||    
T  18207259 gttcacgtg-ccacgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 26296824 - 26296644
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||| ||||| || | |||||||||||||| |||||||||     |  || |||||||||||||||||  ||| |||||||| |||||||||||    
T  26296824 aaaatgttacgtagacaccatatatttccatacacccttgtacacctcatacattaagaagagagaagaggagagaaaagagaaaatgcgcttgtgcggg 26296725  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||  || |||| | | ||||||||||||||||||  |||| | ||||| ||||||||||| |||||||||||||||||    
T  26296724 gtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 38044377 - 38044197
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||  |     ||||||||| ||||| |||||||| ||||| ||| ||||||||||    
T  38044377 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagaaaagagaagaagaaagagaaagtgtacttgtgcggg 38044278  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||  || | |||||| |||||||| |||||||||| | || ||||||||||||||||| | | |||||||||||||||    
T  38044277 gtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 41915921 - 41915741
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||  ||     |||||||||||||| |||||||| ||||| ||| ||||||||||    
T  41915921 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 41915822  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||  || |||||||| |||||||| ||| | |||| | || ||||||||||||||||| | | |||||||||||||||    
T  41915821 gtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 286 - 413
Target Start/End: Complemental strand, 38267166 - 38267039
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||| || ||| |||||||| ||||| |||| |||| ||||||| ||    
T  38267166 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtca 38267067  T
Q  386 cctaaggatatctatgtatcataactca 413  Q
    | ||||| | |||||||||||| |||||    
T  38267066 cataagggtgtctatgtatcattactca 38267039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 237 - 412
Target Start/End: Complemental strand, 22343541 - 22343361
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctc------taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcgg 330  Q
    |||||||||||||||| || |||| || |||||||| ||||||||| ||      |||||||||||||||| |||||||| ||||| ||| |||||||||    
T  22343541 aaaatgttacatagacaccttttaattgcatacacccttgtacacc-tcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgg 22343443  T
Q  331 ggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||  ||  ||||||| |||||||| ||||| |||| | || ||||||||||||||||| | | |||||||||||||||    
T  22343442 ggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 286 - 407
Target Start/End: Complemental strand, 3784121 - 3784000
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||||| |||||||||| || ||| |||||||| ||||| |||| || | ||||||||||    
T  3784121 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgcca 3784022  T
Q  386 cctaaggatatctatgtatcat 407  Q
    ||||||| | ||||||||||||    
T  3784021 cctaagggtgtctatgtatcat 3784000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 286 - 407
Target Start/End: Original strand, 32951467 - 32951588
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||| || |||||||||||| |||||||||  |||| ||||||| ||    
T  32951467 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtca 32951566  T
Q  386 cctaaggatatctatgtatcat 407  Q
     |||||  | ||||||||||||    
T  32951567 tctaagagtgtctatgtatcat 32951588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 237 - 415
Target Start/End: Complemental strand, 21234581 - 21234398
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||  |||||||| ||||||||||  ||     ||||||||| | |||||| | || ||||||||||||||||||||    
T  21234581 aaaatgttacatagacaccttttattctcatacaccattgtacaccccatacattaggaagagaggaaaggagaggtaagagaaaatgtgcttgtgcggg 21234482  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcatt 415  Q
    || || ||| | || ||| | |||||| ||||  |||| |||| ||||||| ||||||||||| ||||||||||||||||||||    
T  21234481 gtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactcatt 21234398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 285 - 412
Target Start/End: Original strand, 35468828 - 35468955
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcc 384  Q
    ||||||||||||||||||| | |||| ||||| |||| |||||| |||||||| ||  ||||| |||||||||||||||| |||| || | |||||||||    
T  35468828 ctaggaagagagaagaggataggaaagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgcc 35468927  T
Q  385 acctaaggatatctatgtatcataactc 412  Q
    | |||||||| |||||||||||| ||||    
T  35468928 atctaaggatgtctatgtatcattactc 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 286 - 412
Target Start/End: Complemental strand, 7389515 - 7389389
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||  ||||||  ||| ||||| ||||||||||||||||||||||||| || ||| |||||||| ||||| |||| |||  ||||||||||    
T  7389515 taggaagagagagtaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgcca 7389416  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||| | |||||||||||| ||||    
T  7389415 cctaagggtgtctatgtatcattactc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 286 - 413
Target Start/End: Original strand, 32564400 - 32564527
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||||||||| |||||||| ||||| |||  ||||||||||||||  |  |||||||| |||||||| ||||| |||| | || ||||||||||    
T  32564400 taggaagagagaagagaagaagaaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 32564499  T
Q  386 cctaaggatatctatgtatcataactca 413  Q
    |||||| || | ||||||||||||||||    
T  32564500 cctaagaatgtttatgtatcataactca 32564527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 237 - 411
Target Start/End: Complemental strand, 35523056 - 35522877
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || || |||||| ||||||||| ||||||||||  ||     ||||||||||||| ||||  ||| ||||| ||||||||||||||    
T  35523056 aaaatgttacataaacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggg 35522957  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataact 411  Q
     ||||  || |||| ||| |||||||| ||||| |||  || | ||||||||||| ||||||| ||||||||||||||||    
T  35522956 atccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcataact 35522877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 4999488 - 4999614
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    ||||||||||||||||||||  ||| ||||| |||| |||||||||||||||||||| || | | |||||||| ||||| |||| || | ||||||||||    
T  4999488 taggaagagagaagaggagataaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgcca 4999587  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
     |||||| | |||||||||||| ||||    
T  4999588 tctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 312 - 412
Target Start/End: Complemental strand, 3434662 - 3434562
Alignment:
Q  312 agaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataact 411  Q
    ||||| |||||||||||||| |||||||||| || ||| || ||||| ||||| |||| |||| ||||||||||||||||||| |||||||||||| |||    
T  3434662 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 3434563  T
Q  412 c 412  Q
    |    
T  3434562 c 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 312 - 412
Target Start/End: Original strand, 36361913 - 36362013
Alignment:
Q  312 agaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataact 411  Q
    ||||| |||||||||| |||||||||||||| || ||| |||||||| ||||| |||| |||| ||||||||||||||||| | |||||||||||| |||    
T  36361913 agaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattact 36362012  T
Q  412 c 412  Q
    |    
T  36362013 c 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 412
Target Start/End: Original strand, 46374807 - 46374902
Alignment:
Q  317 atgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||||||||||||||||| ||| |||| ||| |||||||| ||||| |||  |||| ||| ||||||||||||||| |||||||||||||||||    
T  46374807 atgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 286 - 412
Target Start/End: Original strand, 19436161 - 19436287
Alignment:
Q  286 taggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgcca 385  Q
    |||||||||| ||||| |||  ||| ||||| ||||||| |||||| |||||||||| || ||| |||||||| ||||| |||| || | ||||||| ||    
T  19436161 taggaagagaaaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtca 19436260  T
Q  386 cctaaggatatctatgtatcataactc 412  Q
    ||||||||| |||||||||||| ||||    
T  19436261 cctaaggatgtctatgtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 40957885 - 40957707
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| ||| |||||| |||||||| ||||||||||  |     |||||||||||||| ||||  ||| ||||| ||||||||| |||| |    
T  40957885 aatgatacatagacacccattattttcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacgggat 40957786  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    ||||||||| || ||| |||||||| ||||| | || |||  ||||||||||||||||  | |||||||||||| ||||    
T  40957785 ccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 237 - 413
Target Start/End: Original strand, 39255844 - 39256024
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| |||||||||  |||||||| |||||||  || |      |||||||||||||||||| |||| ||||| ||| |||||| ||     
T  39255844 aaaatgttacatagacaccctttattatcatacacccttgtacattctatccaccgggaagagagaagaggagatgaaagagaaagtgttcttgtgtgga 39255943  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    ||||||||| |||| ||| |||||||| | ||| | || |  | ||||||||||||||||| | ||||||||||||||||||    
T  39255944 gtccacgtg-ccacgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactca 39256024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 312 - 412
Target Start/End: Complemental strand, 36362126 - 36362026
Alignment:
Q  312 agaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataact 411  Q
    ||||| |||||||||| |||||||||||||| || ||| |||||||| ||||| |||| |||| |||||| |||||||||| | |||||||||||| |||    
T  36362126 agaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattact 36362027  T
Q  412 c 412  Q
    |    
T  36362026 c 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 382
Target Start/End: Original strand, 16374744 - 16374894
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| |||||||||  ||||||||||||||||| |  ||     ||||||||||| | |||| |||| ||||  |||||||||| | |    
T  16374744 aaaatgttacatagacaccctttattctcatacacctttgtacactccatacattaggaagagagaaaaagagatgaaagagaatgtgtgcttgtgtgag 16374843  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattg 382  Q
     ||||||||||||| ||| |||||||| |||||||||| | || |||||||    
T  16374844 atccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattg 16374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 237 - 415
Target Start/End: Complemental strand, 31736057 - 31735881
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||| |||||  || |||||| ||||||||| ||||||||||  ||     ||||||||||||||||||  ||| ||||| ||||||||||||||    
T  31736057 aaaatgttagatagataccttttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggg 31735958  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcatt 415  Q
     |||| ||| |||| |||| |       ||||| |||  |||  ||||||||||||||||||| ||||||||||||||||||||    
T  31735957 atccatgtggccacgtgtttg-------tgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactcatt 31735881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 342
Target Start/End: Complemental strand, 11044356 - 11044248
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| | |||||||| ||||||||||||||||||     |  ||||||||||||||| |||| |||| ||||| ||| ||||||||||||    
T  11044356 aatgatacatagacactctttattttcatacacctttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtacttgtgcggggt 11044257  T
Q  334 ccacgtgac 342  Q
    |||||||||    
T  11044256 ccacgtgac 11044248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 27744282 - 27744361
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtgg 364  Q
    ||||||||||||||||||||| || | ||||||||||||| || ||| |||||||| |||||||| |||||||| |||||    
T  27744282 ctaggaagagagaagaggagaggatagagaaaatgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgg 27744361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 3694491 - 3694387
Alignment:
Q  288 ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacc 387  Q
    ||||||||||||||||||  ||| ||||| |||||||||||||| ||||| |||| || ||| |||||||| ||||| |||  || | ||||||| ||||    
T  3694491 ggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacc 3694392  T
Q  388 taagg 392  Q
    |||||    
T  3694391 taagg 3694387  T

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Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 369
Target Start/End: Original strand, 2318161 - 2318300
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccc-------tctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcg 329  Q
    |||||||||||||||| | |||||||||||||||||||||||||| |       |  ||  |||||||||| |||| |||| ||||| | ||||| ||      
T  2318161 aaaatgttacatagacacactttatttccatacacctttgtacactccatgcattagagagagagagaagatgagatgaaagagaaagtatgcttatgtc 2318260  T
Q  330 gggtccacgtgaccacatgttagatttttatgtggatgtc 369  Q
    ||||||||||||||||| || |||||||| ||||| ||||    
T  2318261 gggtccacgtgaccacacgtcagatttttgtgtgggtgtc 2318300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 285 - 412
Target Start/End: Original strand, 10343536 - 10343663
Alignment:
Q  285 ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggt-tgtattgc 383  Q
    ||||||||||||||||||||| |||| ||||| ||||| | ||| | |||||||  | ||  ||| |||||||| ||||| ||| |||| | |||||| |    
T  10343536 ctaggaagagagaagaggagaggaaagagaaagtgtgcgtctgcagagtccacggaaacatgtgtcagatttttgtgtgggtgt-caagatgtgtatttc 10343634  T
Q  384 cacctaaggatatctatgtatcataactc 412  Q
    ||||||||| | |||||||||||| ||||    
T  10343635 cacctaagggtgtctatgtatcattactc 10343663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 46374744 - 46374790
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccc 283  Q
    |||||||||||||||| || |||||| ||||||||| ||||||||||    
T  46374744 aaaatgttacatagacaccatttattcccatacacccttgtacaccc 46374790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 237 - 415
Target Start/End: Original strand, 849 - 1032
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || ||||||||| ||||||||  ||||||||||      ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  849 aaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcggg 948  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcatt 415  Q
     | |||||||| || ||| || ||||| |||||||||  |||| ||||||||||||||| ||| |||||||||||| |||||||    
T  949 attcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactcatt 1032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 237 - 415
Target Start/End: Original strand, 849 - 1032
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccct-----ctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    ||||||||||||| || ||||||||| ||||||||  ||||||||||      ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  849 aaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcggg 948  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactcatt 415  Q
     | |||||||| || ||| || ||||| |||||||||  |||| ||||||||||||||| ||| |||||||||||| |||||||    
T  949 attcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactcatt 1032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 17177 - 17077
Alignment:
Q  284 tctaggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgc 383  Q
    ||||||||||||||||||||     || ||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| | || ||||||||    
T  17177 tctaggaagagagaagagga-----aagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgc 17083  T
Q  384 caccta 389  Q
     |||||    
T  17082 aaccta 17077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 17283 - 17197
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacacc-----ctctaggaagagagaagaggagaagaaatagaaaat 318  Q
    |||||||||||||||| |||||||||||||||||||||||||||||      |||||||||||||||||||||| |||| |||||||    
T  17283 aaaatgttacatagacaccctttatttccatacacctttgtacaccttatattctaggaagagagaagaggagaggaaagagaaaat 17197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 237 - 413
Target Start/End: Original strand, 8783 - 8964
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctcta-----ggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || ||||||   ||||||| ||||||||||  ||     ||||||||||||| | || |||| ||||||||| |||||| |||    
T  8783 aaaatgttacatagacaccttttattcttatacacccttgtacaccccatatattaggaagagagaagatgggaggaaagagaaaatgtacttgtgtggg 8882  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactca 413  Q
    ||||||||||| |  ||| | |||||| ||| |||||| ||   ||||||| ||| ||||||| ||||| ||||||||||||    
T  8883 gtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcataactca 8964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 392
Target Start/End: Complemental strand, 152678 - 152518
Alignment:
Q  237 aaaatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggg 331  Q
    |||||||||||||||| || |||| || |||||||| ||||||| ||  |     || |||||||||||| |||||||| ||||| |||  |||||||||    
T  152678 aaaatgttacatagacaccttttaattgcatacacccttgtacatcccatgtattagaaagagagaagagaagaagaaagagaaagtgtatttgtgcggg 152579  T
Q  332 gtccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaagg 392  Q
     ||||  ||||||||||| |||||||| ||||| |||| | || |||||||||||| ||||    
T  152578 atccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagg 152518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 4207 - 4029
Alignment:
Q  239 aatgttacatagaccccctttatttccatacacctttgtacaccctct-----aggaagagagaagaggagaagaaatagaaaatgtgcttgtgcggggt 333  Q
    |||| ||||||||| || |||||| ||||||||| ||||||||||  |     ||||||||||||||| |||  ||| ||||| ||||||| |||||| |    
T  4207 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 4108  T
Q  334 ccacgtgaccacatgttagatttttatgtggatgtccaaggttgtattgccacctaaggatatctatgtatcataactc 412  Q
    |||||| || || ||| |||||||| ||||| |||  || | |||||||||| |||| | | |||||||||||| ||||    
T  4107 ccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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