View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8169_low_4 (Length: 488)
Name: NF8169_low_4
Description: NF8169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8169_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 425; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 1 - 481
Target Start/End: Original strand, 35899165 - 35899645
Alignment:
| Q |
1 |
cacaaattataaaatcgaacacggcattaatgccattaataatttgagagaatatgaaataagtgaatcatcgtacggacaacatacaatgtctgtgcta |
100 |
Q |
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||||||||||||||| ||||||| |||| || |||||||||||||||||||| ||||||||| ||||||||| | |||||| |||||||||||||||||| |
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| T |
35899165 |
cacaaattataaaattgaacacgacattgataccattaataatttgagagaaaatgaaataattgaatcatctttcggacaccatacaatgtctgtgcta |
35899264 |
T |
|
| Q |
101 |
ctgaggaatctgaggtgctcaactgaggcccaacttcactgagtttgtccacacactcggcaaagtgagcaccactccatcgggtgttttaaggacatcc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35899265 |
ctgaggaatctgaggtgctcaactgaggcccaacttccctgagtttgtccacacactcggcaaagtgagcaccactccatcgggtgttttaaggacatcc |
35899364 |
T |
|
| Q |
201 |
tcctccacttgcacagacttacctatctcaacccttacttcttcgtcacagactggtcatcaatatccatcaccatatgttgagacgacccaaaccggtc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
35899365 |
tcctccacttgcacagacttacctatctcaacccttacttcttcgtcacagactggtcatcaatatccatcaccatatgttgagactacccaaaccggtc |
35899464 |
T |
|
| Q |
301 |
gagttgtgggccaacgactgtagcagcaggagagccgacctgagaagatgagcctgtagccctagccaagagcgcgttgagactgcgagggtccttcctc |
400 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
35899465 |
gagttgtgggccaacggctgtagcagcaggagagccgacctgagaagatgagcctgtagccctagccaagagcgcgttgagaccgcgagggtccttcctc |
35899564 |
T |
|
| Q |
401 |
tttgacccagtcgaccaaactccaggcttcatacttagtttcttcagcttttcttgtagtccagccatgttaactccaaac |
481 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
35899565 |
tttgacccagtcgaccaaactccaggcttcatacttagtttcttcagcttttcttgtagtccagccatgttaacttcaaac |
35899645 |
T |
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