View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8170_high_7 (Length: 323)

Name: NF8170_high_7
Description: NF8170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8170_high_7
NF8170_high_7
[»] chr6 (17 HSPs)
chr6 (1-323)||(19162825-19163157)
chr6 (285-323)||(33549146-33549184)
chr6 (284-323)||(9626074-9626113)
chr6 (284-323)||(12234502-12234541)
chr6 (280-323)||(13227149-13227192)
chr6 (284-323)||(28841456-28841495)
chr6 (288-323)||(30127442-30127477)
chr6 (289-323)||(10338174-10338208)
chr6 (286-320)||(12216789-12216823)
chr6 (286-323)||(23910108-23910145)
chr6 (287-323)||(346572-346608)
chr6 (284-320)||(6385907-6385943)
chr6 (295-323)||(13661562-13661590)
chr6 (287-323)||(16405127-16405163)
chr6 (287-323)||(24641188-24641224)
chr6 (295-323)||(31622997-31623025)
chr6 (287-323)||(34444845-34444881)
[»] chr3 (38 HSPs)
chr3 (266-323)||(21960593-21960650)
chr3 (285-323)||(10445135-10445173)
chr3 (287-323)||(47454615-47454651)
chr3 (284-323)||(4844506-4844545)
chr3 (284-323)||(4870202-4870241)
chr3 (284-323)||(14186689-14186728)
chr3 (284-323)||(44743850-44743889)
chr3 (284-323)||(51903873-51903912)
chr3 (285-323)||(36720423-36720461)
chr3 (285-323)||(37788461-37788499)
chr3 (286-323)||(30311348-30311385)
chr3 (286-323)||(33899656-33899693)
chr3 (286-323)||(52769980-52770017)
chr3 (280-323)||(2597211-2597254)
chr3 (284-323)||(20501738-20501777)
chr3 (284-323)||(31520600-31520639)
chr3 (285-323)||(2667904-2667942)
chr3 (285-323)||(3427549-3427587)
chr3 (285-323)||(16354888-16354926)
chr3 (285-323)||(27093357-27093395)
chr3 (285-323)||(27259203-27259241)
chr3 (285-323)||(28703400-28703438)
chr3 (285-323)||(30510195-30510233)
chr3 (285-323)||(31608520-31608558)
chr3 (285-323)||(39253739-39253777)
chr3 (285-323)||(53412987-53413025)
chr3 (285-322)||(13808881-13808918)
chr3 (286-323)||(19154673-19154710)
chr3 (285-322)||(29563943-29563980)
chr3 (290-323)||(45229276-45229309)
chr3 (290-323)||(45308903-45308936)
chr3 (291-323)||(9557362-9557394)
chr3 (287-323)||(14339652-14339688)
chr3 (287-323)||(17108896-17108932)
chr3 (287-323)||(19716239-19716275)
chr3 (287-323)||(33861732-33861768)
chr3 (287-323)||(49494144-49494180)
chr3 (287-319)||(54990748-54990780)
[»] chr8 (25 HSPs)
chr8 (284-323)||(968404-968443)
chr8 (287-323)||(16852382-16852418)
chr8 (284-323)||(35641896-35641935)
chr8 (288-322)||(11928730-11928764)
chr8 (289-323)||(29858049-29858083)
chr8 (285-322)||(33017257-33017294)
chr8 (287-323)||(19703485-19703521)
chr8 (284-323)||(3624622-3624661)
chr8 (287-318)||(18546360-18546391)
chr8 (284-323)||(22193359-22193398)
chr8 (285-323)||(6536562-6536600)
chr8 (289-323)||(11819818-11819852)
chr8 (285-323)||(23361645-23361683)
chr8 (289-323)||(27750772-27750806)
chr8 (285-323)||(31408118-31408156)
chr8 (286-323)||(3826774-3826811)
chr8 (285-322)||(8794341-8794378)
chr8 (286-323)||(11492070-11492107)
chr8 (286-323)||(29431053-29431090)
chr8 (289-322)||(33727873-33727906)
chr8 (285-318)||(35690060-35690093)
chr8 (285-321)||(7140753-7140789)
chr8 (283-323)||(28540464-28540504)
chr8 (287-323)||(28783102-28783138)
chr8 (287-323)||(36205237-36205273)
[»] chr1 (35 HSPs)
chr1 (284-323)||(12587312-12587351)
chr1 (284-323)||(51814536-51814575)
chr1 (284-322)||(2220015-2220053)
chr1 (285-323)||(2799904-2799942)
chr1 (285-323)||(3265966-3266004)
chr1 (285-323)||(33700769-33700807)
chr1 (286-323)||(7219915-7219952)
chr1 (286-323)||(15786317-15786354)
chr1 (285-321)||(17745252-17745288)
chr1 (287-323)||(19528325-19528361)
chr1 (284-323)||(12370205-12370244)
chr1 (284-323)||(16893436-16893475)
chr1 (284-323)||(17439959-17439998)
chr1 (284-323)||(26232356-26232395)
chr1 (288-323)||(38947471-38947506)
chr1 (285-323)||(1247155-1247193)
chr1 (285-323)||(4566590-4566628)
chr1 (289-323)||(6122836-6122870)
chr1 (285-323)||(8177178-8177216)
chr1 (285-323)||(8904456-8904494)
chr1 (288-322)||(9117162-9117196)
chr1 (285-319)||(21547476-21547510)
chr1 (285-323)||(36371512-36371550)
chr1 (285-323)||(44961807-44961845)
chr1 (284-322)||(51281394-51281432)
chr1 (285-322)||(12662325-12662362)
chr1 (286-323)||(31383795-31383832)
chr1 (285-322)||(50901625-50901662)
chr1 (287-323)||(12259302-12259338)
chr1 (291-323)||(21392879-21392911)
chr1 (287-323)||(24047100-24047136)
chr1 (287-323)||(25297814-25297850)
chr1 (287-323)||(43446005-43446041)
chr1 (287-323)||(45266876-45266912)
chr1 (287-323)||(52029935-52029971)
[»] scaffold0299 (1 HSPs)
scaffold0299 (285-323)||(11570-11608)
[»] scaffold0258 (1 HSPs)
scaffold0258 (285-323)||(15319-15357)
[»] chr5 (21 HSPs)
chr5 (285-323)||(16773849-16773887)
chr5 (285-323)||(14285203-14285241)
chr5 (285-323)||(25627099-25627137)
chr5 (285-323)||(43442238-43442276)
chr5 (287-323)||(35360084-35360120)
chr5 (284-323)||(14495800-14495839)
chr5 (280-323)||(25979212-25979255)
chr5 (285-323)||(8779306-8779344)
chr5 (285-323)||(29075823-29075861)
chr5 (285-323)||(29173532-29173570)
chr5 (289-323)||(30109308-30109342)
chr5 (285-323)||(34984848-34984886)
chr5 (285-323)||(37258362-37258400)
chr5 (286-323)||(1410657-1410693)
chr5 (290-319)||(5390853-5390882)
chr5 (287-316)||(17675759-17675788)
chr5 (285-322)||(27841015-27841052)
chr5 (287-323)||(84866-84902)
chr5 (287-323)||(3315257-3315293)
chr5 (295-323)||(4793094-4793122)
chr5 (279-323)||(9842836-9842880)
[»] chr7 (39 HSPs)
chr7 (287-323)||(20335829-20335865)
chr7 (284-323)||(7309398-7309437)
chr7 (280-323)||(43215226-43215269)
chr7 (284-323)||(45709703-45709742)
chr7 (284-322)||(5668566-5668604)
chr7 (285-323)||(26459406-26459444)
chr7 (285-322)||(17041008-17041045)
chr7 (283-323)||(22035440-22035480)
chr7 (287-323)||(22760905-22760941)
chr7 (287-323)||(29916806-29916842)
chr7 (284-323)||(2446350-2446389)
chr7 (284-323)||(3174969-3175008)
chr7 (284-323)||(14058295-14058334)
chr7 (284-323)||(14368323-14368362)
chr7 (285-320)||(21558173-21558208)
chr7 (285-323)||(2882992-2883030)
chr7 (285-323)||(2962501-2962539)
chr7 (285-323)||(9871282-9871320)
chr7 (285-323)||(11700207-11700245)
chr7 (285-323)||(13106778-13106816)
chr7 (285-323)||(15137595-15137633)
chr7 (285-323)||(18363738-18363776)
chr7 (285-323)||(23552160-23552198)
chr7 (285-323)||(41519260-41519298)
chr7 (290-323)||(25590653-25590686)
chr7 (286-323)||(29385740-29385777)
chr7 (290-323)||(31835234-31835267)
chr7 (290-323)||(48771980-48772013)
chr7 (287-323)||(7499922-7499958)
chr7 (287-323)||(18056773-18056809)
chr7 (286-322)||(30217922-30217958)
chr7 (288-320)||(30301925-30301957)
chr7 (287-323)||(37085547-37085583)
chr7 (287-323)||(37473656-37473692)
chr7 (287-323)||(38374597-38374633)
chr7 (285-317)||(39631892-39631924)
chr7 (287-323)||(42712000-42712036)
chr7 (287-323)||(43590949-43590985)
chr7 (287-323)||(49050489-49050525)
[»] chr4 (25 HSPs)
chr4 (287-323)||(30938217-30938253)
chr4 (287-323)||(39509112-39509148)
chr4 (284-323)||(49576889-49576928)
chr4 (285-323)||(7949450-7949488)
chr4 (285-323)||(23377998-23378036)
chr4 (285-323)||(37109347-37109385)
chr4 (287-320)||(19229206-19229239)
chr4 (287-323)||(19238575-19238611)
chr4 (287-323)||(46295139-46295175)
chr4 (287-323)||(47044759-47044795)
chr4 (284-323)||(51948522-51948561)
chr4 (285-323)||(2622391-2622429)
chr4 (285-323)||(4249219-4249257)
chr4 (285-323)||(7292794-7292832)
chr4 (285-323)||(12798726-12798764)
chr4 (285-323)||(13015469-13015507)
chr4 (285-323)||(28635738-28635776)
chr4 (285-323)||(37274455-37274493)
chr4 (289-323)||(38869810-38869844)
chr4 (285-323)||(51622527-51622565)
chr4 (286-323)||(43623441-43623478)
chr4 (287-323)||(9936959-9936995)
chr4 (287-323)||(15729524-15729560)
chr4 (287-323)||(32992654-32992690)
chr4 (287-323)||(55427198-55427234)
[»] chr2 (25 HSPs)
chr2 (287-323)||(39715034-39715070)
chr2 (284-322)||(4262297-4262335)
chr2 (285-323)||(33582015-33582053)
chr2 (285-322)||(33569854-33569891)
chr2 (286-323)||(42327392-42327429)
chr2 (287-323)||(21939121-21939157)
chr2 (287-323)||(29503313-29503349)
chr2 (287-323)||(37480117-37480153)
chr2 (284-323)||(7799030-7799069)
chr2 (284-323)||(25637193-25637232)
chr2 (288-323)||(32687523-32687558)
chr2 (285-323)||(3661004-3661042)
chr2 (285-323)||(13803537-13803575)
chr2 (285-323)||(14500319-14500357)
chr2 (285-323)||(19244151-19244189)
chr2 (289-323)||(21195676-21195710)
chr2 (289-323)||(42860390-42860424)
chr2 (286-323)||(7599978-7600015)
chr2 (285-322)||(11251130-11251167)
chr2 (290-323)||(28846733-28846766)
chr2 (286-323)||(31573638-31573675)
chr2 (285-321)||(13519048-13519084)
chr2 (287-323)||(19016073-19016109)
chr2 (287-323)||(21213811-21213847)
chr2 (287-323)||(23052521-23052557)
[»] scaffold0194 (1 HSPs)
scaffold0194 (284-323)||(13041-13080)
[»] scaffold0291 (1 HSPs)
scaffold0291 (287-323)||(2468-2504)
[»] scaffold1367 (1 HSPs)
scaffold1367 (285-320)||(836-871)
[»] scaffold0008 (1 HSPs)
scaffold0008 (284-323)||(49348-49387)
[»] scaffold0238 (1 HSPs)
scaffold0238 (285-323)||(2707-2745)
[»] scaffold0180 (1 HSPs)
scaffold0180 (285-323)||(19958-19996)
[»] scaffold0118 (1 HSPs)
scaffold0118 (285-323)||(41629-41667)


Alignment Details
Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 19163157 - 19162825
Alignment:
Q  1 tcatcaataaagcaaagatgttatctggtagctcctgcattcacataattaaagcaaatataagtataaaaaattcttaaaatcgacgcttgaaaatcgc 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  19163157 tcatcaataaagcaaagacgttatctggtagctcctgcattcacataattaaagcaaatataagtataaaaaattcttaaaatcgatgcttgaaaatagc 19163058  T
Q  101 ttactgttgagtttgtgatcttatcagtattgaatcaacaaaaacatgagaaaagaaataccagttcagttttgaagaatttatatttgtttcgttgttt 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19163057 ttactgttgagtttgtgatcttatcggtattgaatcaacaaaaacatgagaaaagaaataccagttgagttttgaagaatttatatttgtttcgttgttt 19162958  T
Q  201 tttaacaa----------attgagtcatcctttcagtcgtcacgatgagtaagactgtgatattcttttagaaactaaattagcccactcataggagaga 290  Q
    ||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19162957 tttaacaaaccgacactgattgagtcatcctttcagtcgtcacgatgagtaagactgtgatattcttttagaaactaaattagcccactcataggagaga 19162858  T
Q  291 atcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||| |||||||||||||||||||    
T  19162857 atcgaacctgagatctcgaggaggagcacactc 19162825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 33549184 - 33549146
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactc 33549146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 9626113 - 9626074
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  9626113 ggagagaatcgaacatgagacctcgaggaggagcatactc 9626074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 12234502 - 12234541
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  12234502 ggagagaatcgaacctgagacctcgagagggagcacactc 12234541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 280 - 323
Target Start/End: Original strand, 13227149 - 13227192
Alignment:
Q  280 cataggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||    
T  13227149 catatgagagaatcgaacttgagacttcgaggaggagcacactc 13227192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 28841495 - 28841456
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  28841495 ggagagaatcgaacttgagaccttgaggaggagcacactc 28841456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 323
Target Start/End: Complemental strand, 30127477 - 30127442
Alignment:
Q  288 agaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| |||||||||||||    
T  30127477 agaatcgaacctgagacctcgaagaggagcacactc 30127442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 10338174 - 10338208
Alignment:
Q  289 gaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||| ||||||||||||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactc 10338208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 12216823 - 12216789
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcaca 320  Q
    ||||||||||||||||||||||||| |||||||||    
T  12216823 agagaatcgaacctgagacctcgagaaggagcaca 12216789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 23910108 - 23910145
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  23910108 agagattcgaacctgagaccttgaggaggagcacactc 23910145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 346608 - 346572
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  346608 gagaatcgaacatgagacctcgaggagaagcacactc 346572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 6385943 - 6385907
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcaca 320  Q
    |||||||||||||||||||||||  ||||||||||||    
T  6385943 ggagagaatcgaacctgagaccttaaggaggagcaca 6385907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 295 - 323
Target Start/End: Complemental strand, 13661590 - 13661562
Alignment:
Q  295 aacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||    
T  13661590 aacctgagacctcgaggaggagcacactc 13661562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 16405163 - 16405127
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||| |||||||||||||||| |||||||||    
T  16405163 gagaatcgaaactgagacctcgaggagaagcacactc 16405127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 24641188 - 24641224
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||| | |||||||||||||||||||||    
T  24641188 gagaatcgaaccttaaacctcgaggaggagcacactc 24641224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 295 - 323
Target Start/End: Original strand, 31622997 - 31623025
Alignment:
Q  295 aacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactc 31623025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 34444881 - 34444845
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| | ||||||||||||||    
T  34444881 gagaatcgaacctgagaccttggggaggagcacactc 34444845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 21960650 - 21960593
Alignment:
Q  266 taaattagcccactcataggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||| || | |||||||||||| ||||||||||||||||||||||||||    
T  21960650 taaattagcccacccaaatgagagaatcgaatctgagacctcgaggaggagcacactc 21960593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 10445135 - 10445173
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10445135 gagagaatcgaacctgagacctcgaggaggagcacactc 10445173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 47454615 - 47454651
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||||||||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactc 47454651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 4844506 - 4844545
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  4844506 ggagagaatcgatcctgagacctcgaggaggagcacactc 4844545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 4870202 - 4870241
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  4870202 ggagagaatcgatcctgagacctcgaggaggagcacactc 4870241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 14186728 - 14186689
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  14186728 ggagagaatcgaacctgagaccttgaggaggagcacactc 14186689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 44743850 - 44743889
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  44743850 ggagataatcgaacctgagacctcgaggaggagcacactc 44743889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 51903873 - 51903912
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  51903873 ggagagaatcgaacctgagaccacgaggaggagcacactc 51903912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 36720461 - 36720423
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  36720461 gagagaatcgaacctgaaacctcgaggaggagcacactc 36720423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 37788461 - 37788499
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  37788461 gagagaatcgaacctgagaccttgaggaggagcacactc 37788499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 323
Target Start/End: Complemental strand, 30311385 - 30311348
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  30311385 agagaatcgaacctgagaccttgaggaggagcacactc 30311348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 323
Target Start/End: Complemental strand, 33899693 - 33899656
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  33899693 agagaatcgaacctgagacctagaggaggagcacactc 33899656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 52769980 - 52770017
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| |||||||||||||||    
T  52769980 agagaatcgaacctgagacctcaaggaggagcacactc 52770017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 280 - 323
Target Start/End: Original strand, 2597211 - 2597254
Alignment:
Q  280 cataggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||| ||||| |||||||||||||||| |||||||||||||||    
T  2597211 catagtagagattcgaacctgagacctcaaggaggagcacactc 2597254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 20501777 - 20501738
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  20501777 ggagagaatcgaacctgagaccttaaggaggagcacactc 20501738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 31520600 - 31520639
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  31520600 ggagagaatcaaacctaagacctcgaggaggagcacactc 31520639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 2667942 - 2667904
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  2667942 gagataatcgaacctgagacctcgaggaagagcacactc 2667904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 3427549 - 3427587
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  3427549 gagagaatcgaatctgagaccttgaggaggagcacactc 3427587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 16354888 - 16354926
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  16354888 gagagaatcgaacctgagaccctgaggaggagcacactc 16354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 27093357 - 27093395
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  27093357 gagagaatcaaacctgagaccttgaggaggagcacactc 27093395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 27259241 - 27259203
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  27259241 gagagaatcaaacctgaaacctcgaggaggagcacactc 27259203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 28703400 - 28703438
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| || |||||||||||||    
T  28703400 gagagaatcgaacctgagaccttgaagaggagcacactc 28703438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 30510195 - 30510233
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  30510195 gagagaatcgaacctgagacctcgagaaggagcatactc 30510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 31608520 - 31608558
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  31608520 gagagaatcaaatctgagacctcgaggaggagcacactc 31608558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 39253777 - 39253739
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| || |||||||||||||    
T  39253777 gagagaatcgaacctgagaccttgaagaggagcacactc 39253739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 53413025 - 53412987
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  53413025 gagagaattgaacctgagaccttgaggaggagcacactc 53412987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 13808881 - 13808918
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  13808881 gagagaattgaacctgagacctagaggaggagcacact 13808918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Complemental strand, 19154710 - 19154673
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||  |||||||||||||||    
T  19154710 agagaatcgaacctgagacctttaggaggagcacactc 19154673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 29563980 - 29563943
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  29563980 gagagaatcgaacctgagacttcgaggagaagcacact 29563943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 323
Target Start/End: Complemental strand, 45229309 - 45229276
Alignment:
Q  290 aatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||| |||||||||||||||||    
T  45229309 aatcgaacctgagaccacgaggaggagcacactc 45229276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 323
Target Start/End: Original strand, 45308903 - 45308936
Alignment:
Q  290 aatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||||||||||| ||||    
T  45308903 aatcgaacctgagacctcgaggaggagcatactc 45308936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 291 - 323
Target Start/End: Complemental strand, 9557394 - 9557362
Alignment:
Q  291 atcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||| |||||||||||||||||||    
T  9557394 atcgaacctgagatctcgaggaggagcacactc 9557362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 14339688 - 14339652
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||| | ||||||||||||||||    
T  14339688 gagaatcgaacctgagacattgaggaggagcacactc 14339652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 17108896 - 17108932
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  17108896 gagaatcaaacctgagaccttgaggaggagcacactc 17108932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 19716275 - 19716239
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  19716275 gagaatcgaaccagagaccttgaggaggagcacactc 19716239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 33861732 - 33861768
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||| | |||||||||||||||||||||||    
T  33861732 gagaatcgaacattagacctcgaggaggagcacactc 33861768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 49494144 - 49494180
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  49494144 gagaatcaaacctgagacctcgaggaagagcacactc 49494180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 319
Target Start/End: Complemental strand, 54990780 - 54990748
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcac 319  Q
    |||||||||||||||||||| ||||||||||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcac 54990748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 968443 - 968404
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  968443 ggagagaatcgaacctgagacctcgaggaggagcacactc 968404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 16852418 - 16852382
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactc 16852382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 35641896 - 35641935
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  35641896 ggagagaatcgaacctgagacatcgaggaggagcacactc 35641935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 11928730 - 11928764
Alignment:
Q  288 agaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||||||||||||||||||||||||||||||    
T  11928730 agaatcgaacctgagacctcgaggaggagcacact 11928764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 29858049 - 29858083
Alignment:
Q  289 gaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactc 29858083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 33017294 - 33017257
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||||||||||||||||| |||||||||||||||    
T  33017294 gagagaatcgaacctgagaccttgaggaggagcacact 33017257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 19703485 - 19703521
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactc 19703521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 3624661 - 3624622
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  3624661 ggagagaatcgaacctgagaccttgaagaggagcacactc 3624622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 287 - 318
Target Start/End: Original strand, 18546360 - 18546391
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagca 318  Q
    ||||||||||||||||||||||||||||||||    
T  18546360 gagaatcgaacctgagacctcgaggaggagca 18546391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 22193359 - 22193398
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  22193359 ggagagaatcgaacctaagaccttgaggaggagcacactc 22193398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 6536600 - 6536562
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  6536600 gagagaattgaacctgagaccttgaggaggagcacactc 6536562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 11819852 - 11819818
Alignment:
Q  289 gaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||| ||||||||||||||||    
T  11819852 gaatcgaacctgagaccttgaggaggagcacactc 11819818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 23361645 - 23361683
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  23361645 gagagaattgaacctgagaccttgaggaggagcacactc 23361683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 27750806 - 27750772
Alignment:
Q  289 gaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||| ||||||||||||||||    
T  27750806 gaatcgaacctgagaccttgaggaggagcacactc 27750772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 31408118 - 31408156
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  31408118 gagagaatcgaacctgaaaccttgaggaggagcacactc 31408156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 3826774 - 3826811
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  3826774 agagaatcgaacctgagatctcgtggaggagcacactc 3826811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 8794341 - 8794378
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||||||||||||||||  |||||||||||||||    
T  8794341 gagagaatcgaacctgagaccctgaggaggagcacact 8794378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 11492070 - 11492107
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  11492070 agagaatcgaacctaagacctcgagaaggagcacactc 11492107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Complemental strand, 29431090 - 29431053
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  29431090 agagaatcgaacctgaggcctcaaggaggagcacactc 29431053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 322
Target Start/End: Original strand, 33727873 - 33727906
Alignment:
Q  289 gaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||||||||||||| |||||||||||||||    
T  33727873 gaatcgaacctgagaccttgaggaggagcacact 33727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 318
Target Start/End: Original strand, 35690060 - 35690093
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagca 318  Q
    |||||||||||||||||||||| |||||||||||    
T  35690060 gagagaatcgaacctgagaccttgaggaggagca 35690093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 7140789 - 7140753
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacac 321  Q
    |||||||||||| |||||| |||||||||||||||||    
T  7140789 gagagaatcgaatctgagagctcgaggaggagcacac 7140753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 28540504 - 28540464
Alignment:
Q  283 aggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||| ||||||||||||| ||| ||||||||||||    
T  28540504 aggagagaattgaacctgagacctagagaaggagcacactc 28540464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 28783138 - 28783102
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  28783138 gagaatcgaacatgagaccttgaggaggagcacactc 28783102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 36205273 - 36205237
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  36205273 gagaatcgaacatgagaccttgaggaggagcacactc 36205237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 12587351 - 12587312
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12587351 ggagagaatcgaacctgagacctcgaggaggagcacactc 12587312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 51814575 - 51814536
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  51814575 ggagagaatcgaacctgagaccttgaggaggagcacactc 51814536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 2220053 - 2220015
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  2220053 ggagagaatcgaacctgagacctcgaggagaagcacact 2220015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 2799942 - 2799904
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  2799942 gagagaatcgaacctgagaccttgaggaggagcacactc 2799904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 3266004 - 3265966
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  3266004 gagagaatcgaacctgagaccttgaggaggagcacactc 3265966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 33700769 - 33700807
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  33700769 gagagaatcgaacctgagaccttgaggaggagcacactc 33700807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 7219915 - 7219952
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  7219915 agagaatcgaacctgagacttcgaggaggagcacactc 7219952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 15786317 - 15786354
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactc 15786354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 17745252 - 17745288
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacac 321  Q
    ||||||||||||| |||||||||||||||||||||||    
T  17745252 gagagaatcgaacatgagacctcgaggaggagcacac 17745288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 19528325 - 19528361
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactc 19528361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 12370244 - 12370205
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  12370244 ggagagaatcaaacatgagacctcgaggaggagcacactc 12370205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 16893475 - 16893436
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  16893475 ggagaaaatcgaacctgagacctcgaggaggagtacactc 16893436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 17439998 - 17439959
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  17439998 ggagagaatcaaacatgagacctcgaggaggagcacactc 17439959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 26232356 - 26232395
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  26232356 ggagagaattgaacctgagacctcaaggaggagcacactc 26232395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 323
Target Start/End: Original strand, 38947471 - 38947506
Alignment:
Q  288 agaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||| ||||||||||||||||    
T  38947471 agaatcgaacctgagaccttgaggaggagcacactc 38947506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 1247193 - 1247155
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  1247193 gagagaatcgaacctgagaccttgaggaggagtacactc 1247155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 4566628 - 4566590
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  4566628 gagagaatcgaacctgagaccctgaggaggagcacactc 4566590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 6122870 - 6122836
Alignment:
Q  289 gaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||| ||||||||||||||||    
T  6122870 gaatcgaacctgagaccttgaggaggagcacactc 6122836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 8177178 - 8177216
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  8177178 gagagaatcgaacctgaaaccttgaggaggagcacactc 8177216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 8904494 - 8904456
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  8904494 gagagaatcgaacttgagaccttgaggaggagcacactc 8904456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 9117196 - 9117162
Alignment:
Q  288 agaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||||||||||||||| ||||||||||||||    
T  9117196 agaatcgaacctgagacctcaaggaggagcacact 9117162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 21547476 - 21547510
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcac 319  Q
    ||||||||||||||||| |||||||||||||||||    
T  21547476 gagagaatcgaacctgaaacctcgaggaggagcac 21547510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 36371550 - 36371512
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  36371550 gagagaatcgaacctcagaccttgaggaggagcacactc 36371512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 44961845 - 44961807
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  44961845 gagagaatcgaacctgagaccctgaggaggagcacactc 44961807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 51281432 - 51281394
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  51281432 ggagagaatcaaacctgagaccttgaggaggagcacact 51281394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 12662362 - 12662325
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  12662362 gagataatcgaacctgagacatcgaggaggagcacact 12662325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 31383795 - 31383832
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| | |||||||||||||||    
T  31383795 agagaatcgaacctgagaccccaaggaggagcacactc 31383832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 50901662 - 50901625
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  50901662 gagagaatcgaatttgagacctcgaggaggagcacact 50901625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 12259338 - 12259302
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  12259338 gagaatcgaacttgagacttcgaggaggagcacactc 12259302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 291 - 323
Target Start/End: Complemental strand, 21392911 - 21392879
Alignment:
Q  291 atcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||| ||||||||||||||||    
T  21392911 atcgaacctgagaccttgaggaggagcacactc 21392879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 24047100 - 24047136
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  24047100 gagaatcgaacttgaaacctcgaggaggagcacactc 24047136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 25297850 - 25297814
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  25297850 gagaatcaaacctcagacctcgaggaggagcacactc 25297814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 43446041 - 43446005
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  43446041 gagaatcgaacatgagaccttgaggaggagcacactc 43446005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 45266912 - 45266876
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  45266912 gagaatcgaacctgagaccttgaggaggagcaaactc 45266876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 52029935 - 52029971
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  52029935 gagaatcgaacctgagaccttgagaaggagcacactc 52029971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 11608 - 11570
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11608 gagagaatcgaacctgagacctcgaggaggagcacactc 11570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 15319 - 15357
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactc 15357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 16773887 - 16773849
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16773887 gagagaatcgaacctgagacctcgaggaggagcacactc 16773849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 14285241 - 14285203
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  14285241 gagagaatcgaacctgagaccttgaggaggagcacactc 14285203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 25627137 - 25627099
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  25627137 gagagaatcgaacctgagaccttgaggaggagcacactc 25627099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 43442276 - 43442238
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  43442276 gagagaatcgaacctgagaccttgaggaggagcacactc 43442238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 35360084 - 35360120
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||||||||| |||||||||    
T  35360084 gagaatcgaacctgagacctcgaggagaagcacactc 35360120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 14495800 - 14495839
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  14495800 ggagagaatcaaatctgagacctcgaggaggagcacactc 14495839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 280 - 323
Target Start/End: Complemental strand, 25979255 - 25979212
Alignment:
Q  280 cataggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||    
T  25979255 cataagagagaatcgaacctgagaccttgaggaggagaacactc 25979212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 8779306 - 8779344
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  8779306 gagataatcgaacctgaaacctcgaggaggagcacactc 8779344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 29075861 - 29075823
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  29075861 gagagaatcgaacatgagatctcgaggaggagcacactc 29075823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 29173570 - 29173532
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  29173570 gagataatcgaacctgaaacctcgaggaggagcacactc 29173532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 30109308 - 30109342
Alignment:
Q  289 gaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||| |||||||||||||||    
T  30109308 gaatcgaacctgagacctcaaggaggagcacactc 30109342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 34984886 - 34984848
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  34984886 gagagaatcgaacctaagaccttgaggaggagcacactc 34984848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 37258362 - 37258400
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  37258362 gagagaatcgaacctgaaaccttgaggaggagcacactc 37258400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 1410657 - 1410693
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||| |||||||||||||||||||||||||    
T  1410657 agagaatcgaac-tgagacctcgaggaggagcacactc 1410693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 319
Target Start/End: Original strand, 5390853 - 5390882
Alignment:
Q  290 aatcgaacctgagacctcgaggaggagcac 319  Q
    ||||||||||||||||||||||||||||||    
T  5390853 aatcgaacctgagacctcgaggaggagcac 5390882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 316
Target Start/End: Original strand, 17675759 - 17675788
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggag 316  Q
    ||||||||||||||||||||||||||||||    
T  17675759 gagaatcgaacctgagacctcgaggaggag 17675788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 27841015 - 27841052
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  27841015 gagagaatcgaaccggagatctcgaggaggagcacact 27841052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 84902 - 84866
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  84902 gagaatcgaacttgagaccttgaggaggagcacactc 84866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 3315293 - 3315257
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3315293 gagaatcgaacctgagaccttgaggaggagcgcactc 3315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 295 - 323
Target Start/End: Original strand, 4793094 - 4793122
Alignment:
Q  295 aacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||    
T  4793094 aacctgagacctcgaggaggagcacactc 4793122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 9842836 - 9842880
Alignment:
Q  279 tcataggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||| ||||||| | ||||| ||||||||||||||||||||||||    
T  9842836 tcatcggagagatttgaacccgagacctcgaggaggagcacactc 9842880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 20335829 - 20335865
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactc 20335865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 7309437 - 7309398
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  7309437 ggagagaatcgaacttgagacctcgaggaggagcacactc 7309398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 323
Target Start/End: Complemental strand, 43215269 - 43215226
Alignment:
Q  280 cataggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  43215269 cataagagagaatcgaacctgagaccttgaggaggagcacactc 43215226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 45709703 - 45709742
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  45709703 ggagataatcgaacctgagacctcgaggaggagcacactc 45709742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 5668566 - 5668604
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  5668566 ggagagaatcgatcctgagacctcgaggaggagcacact 5668604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 26459406 - 26459444
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  26459406 gagagaatcgaacctgagaccttgaggaggagcacactc 26459444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 17041008 - 17041045
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||||||||||||||||| |||||||||||||||    
T  17041008 gagagaatcgaacctgagaccttgaggaggagcacact 17041045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 22035480 - 22035440
Alignment:
Q  283 aggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  22035480 aggagagaatcgaacctgggtcctcgaggaggagcacactc 22035440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 22760941 - 22760905
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| ||||||||||||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactc 22760905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 29916806 - 29916842
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| ||||||||||||||||    
T  29916806 gagaatcgaacctgagaccttgaggaggagcacactc 29916842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 2446389 - 2446350
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  2446389 ggagagaatcgaacttgagatctcgaggaggagcacactc 2446350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 3175008 - 3174969
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  3175008 ggagagaatcgaacctgagacctcgagatggagcacactc 3174969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 14058334 - 14058295
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  14058334 ggagagaatcgaacctgagaccttgaggatgagcacactc 14058295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 14368362 - 14368323
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  14368362 ggagagaatcgaacctgagaccttgaggatgagcacactc 14368323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 285 - 320
Target Start/End: Complemental strand, 21558208 - 21558173
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcaca 320  Q
    |||||||||||||||||||||| |||||||||||||    
T  21558208 gagagaatcgaacctgagaccttgaggaggagcaca 21558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 2883030 - 2882992
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  2883030 gagagaattgaacctgagaccttgaggaggagcacactc 2882992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 2962539 - 2962501
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  2962539 gagagaatcgaacctgagatcttgaggaggagcacactc 2962501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 9871282 - 9871320
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  9871282 gagagaatcgaatctgagacttcgaggaggagcacactc 9871320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 11700245 - 11700207
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  11700245 gagagaatcgaacctgagaccttgaggaggagcaaactc 11700207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 13106778 - 13106816
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  13106778 gagagaatcgaacctgagaccttgaggaggagtacactc 13106816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 15137633 - 15137595
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  15137633 gagagaatctaacctgagaccttgaggaggagcacactc 15137595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 18363776 - 18363738
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  18363776 gagagaatcaaacctgagaccttgaggaggagcacactc 18363738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 23552198 - 23552160
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  23552198 gagagaatcgaacttgagaccttgaggaggagcacactc 23552160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 41519260 - 41519298
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  41519260 gagagaagcgaacctgagaccttgaggaggagcacactc 41519298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 323
Target Start/End: Complemental strand, 25590686 - 25590653
Alignment:
Q  290 aatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||| ||||||||||||||||||||||||    
T  25590686 aatcgaacccgagacctcgaggaggagcacactc 25590653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 29385740 - 29385777
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  29385740 agagaatcaaacctgagaccttgaggaggagcacactc 29385777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 323
Target Start/End: Complemental strand, 31835267 - 31835234
Alignment:
Q  290 aatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||| ||||||||||||||||    
T  31835267 aatcgaacctgagaccttgaggaggagcacactc 31835234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 323
Target Start/End: Complemental strand, 48772013 - 48771980
Alignment:
Q  290 aatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||| |||||||||||||||    
T  48772013 aatcgaacctgagacctcaaggaggagcacactc 48771980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 7499922 - 7499958
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  7499922 gagaatcgaacctgagacctcgaagaggagcaaactc 7499958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 18056773 - 18056809
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||  |||||||||||||||    
T  18056773 gagaatcgaacctgagaccttcaggaggagcacactc 18056809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 30217958 - 30217922
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||||||| |||||||| |||||||||||||||    
T  30217958 agagaatcgaacttgagaccttgaggaggagcacact 30217922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 288 - 320
Target Start/End: Complemental strand, 30301957 - 30301925
Alignment:
Q  288 agaatcgaacctgagacctcgaggaggagcaca 320  Q
    ||||||||||||||||||| |||||||||||||    
T  30301957 agaatcgaacctgagaccttgaggaggagcaca 30301925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 37085547 - 37085583
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  37085547 gagaatcgaacctgaaacctcgaggatgagcacactc 37085583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 37473692 - 37473656
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  37473692 gagaatcgaacctgagacctcaaggaggagcaaactc 37473656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 38374597 - 38374633
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  38374597 gagaatcgaacctaagaccttgaggaggagcacactc 38374633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 317
Target Start/End: Complemental strand, 39631924 - 39631892
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagc 317  Q
    |||||||||||||||||||||| ||||||||||    
T  39631924 gagagaatcgaacctgagaccttgaggaggagc 39631892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 42712036 - 42712000
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  42712036 gagaatcgaacatgagaccttgaggaggagcacactc 42712000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 43590985 - 43590949
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||| | ||||||||||||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactc 43590949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 49050489 - 49050525
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  49050489 gagaatcgaacctgagacctcaaggaggagtacactc 49050525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000007; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 30938217 - 30938253
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||||||||||    
T  30938217 gagaatcgaacctgagacctcgaggaggagcacactc 30938253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 39509148 - 39509112
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||||||||||    
T  39509148 gagaatcgaacctgagacctcgaggaggagcacactc 39509112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 49576889 - 49576928
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  49576889 ggagagaatcgaacctgagaccttgaggaggagcacactc 49576928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 7949450 - 7949488
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  7949450 gagagaatcgaacctgagaccttgaggaggagcacactc 7949488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 23378036 - 23377998
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  23378036 gagagaatcgaacctgagaccttgaggaggagcacactc 23377998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 37109347 - 37109385
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  37109347 gagagaatcgaacctgagaccttgaggaggagcacactc 37109385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 320
Target Start/End: Original strand, 19229206 - 19229239
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcaca 320  Q
    ||||||||||||||||||||||||||||||||||    
T  19229206 gagaatcgaacctgagacctcgaggaggagcaca 19229239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 19238575 - 19238611
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||| ||||||||||||||||||||||||    
T  19238575 gagaatcgaacccgagacctcgaggaggagcacactc 19238611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 46295175 - 46295139
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| ||||||||||||||||    
T  46295175 gagaatcgaacctgagaccttgaggaggagcacactc 46295139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 47044795 - 47044759
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||||| ||||    
T  47044795 gagaatcgaacctgagacctcgaggaggagcaaactc 47044759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 51948561 - 51948522
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  51948561 ggagagaattgaacctgagacctcgaggaggggcacactc 51948522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 2622391 - 2622429
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  2622391 gagagaatcgaacctgagacatggaggaggagcacactc 2622429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 4249257 - 4249219
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  4249257 gagagaatcaaacctgagaccttgaggaggagcacactc 4249219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 7292794 - 7292832
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  7292794 gagagaatcgaacctgagactttgaggaggagcacactc 7292832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 12798764 - 12798726
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  12798764 gagagaatcgaacctgaaacctcgaggagcagcacactc 12798726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 13015507 - 13015469
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  13015507 gagagaatcgaacatgagacttcgaggaggagcacactc 13015469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 28635776 - 28635738
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  28635776 gagagaatcgaacctaagacctccaggaggagcacactc 28635738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 37274455 - 37274493
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  37274455 gagagaatcgaacctaagaccttgaggaggagcacactc 37274493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 38869844 - 38869810
Alignment:
Q  289 gaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||| ||||||||||||||||    
T  38869844 gaatcgaacctgagaccttgaggaggagcacactc 38869810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 51622565 - 51622527
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  51622565 gagagagtcgaacctgagaccttgaggaggagcacactc 51622527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 43623441 - 43623478
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||| || |||||||||||||||    
T  43623441 agagaatcgaacctgagacttcaaggaggagcacactc 43623478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 9936959 - 9936995
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||| || ||||||||||||||||||    
T  9936959 gagaatcgaacctgaaacttcgaggaggagcacactc 9936995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 15729560 - 15729524
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  15729560 gagaatcgaacttgagacatcgaggaggagcacactc 15729524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 32992690 - 32992654
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  32992690 gagaatcgaacttgagaccttgaggaggagcacactc 32992654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 55427198 - 55427234
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactc 55427234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 39715070 - 39715034
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||||||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactc 39715034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 4262297 - 4262335
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  4262297 ggagagaatcgaacctgagaccttgaggaggagcacact 4262335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 33582053 - 33582015
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  33582053 gagagaatcgaacctgagacctcaaggaggagcacactc 33582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 33569854 - 33569891
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    |||||||||||||||||||||||||||| |||||||||    
T  33569854 gagagaatcgaacctgagacctcgaggaagagcacact 33569891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 42327392 - 42327429
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactc 42327429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 21939121 - 21939157
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||| |||||||||||||||||||    
T  21939121 gagaatcgaacctgagatctcgaggaggagcacactc 21939157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 29503349 - 29503313
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| ||||||||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactc 29503313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 37480153 - 37480117
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| ||||||||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactc 37480117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 7799030 - 7799069
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  7799030 ggagagaatcgaatctgagatctcgaggaggagcacactc 7799069  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 25637232 - 25637193
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  25637232 ggagagaaccgaacctgagacctcgagaaggagcacactc 25637193  T

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Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 323
Target Start/End: Complemental strand, 32687558 - 32687523
Alignment:
Q  288 agaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||||||||| |||||||    
T  32687558 agaatcgaacctgagacctcgaggaggaacacactc 32687523  T

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Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 3661004 - 3661042
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  3661004 gagagaatcgaacctgagatctcgaggaggggcacactc 3661042  T

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Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 13803575 - 13803537
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  13803575 gagataatcgaacctgagaccttgaggaggagcacactc 13803537  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 14500357 - 14500319
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  14500357 gagagaatcgaatctgagacctagaggaggagcacactc 14500319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 19244189 - 19244151
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  19244189 gagagaatcgaacctgagaccttggggaggagcacactc 19244151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 21195676 - 21195710
Alignment:
Q  289 gaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||| ||||||||||||||||    
T  21195676 gaatcgaacctgagaccttgaggaggagcacactc 21195710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 42860424 - 42860390
Alignment:
Q  289 gaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||| |||||||||||||||||||||||||    
T  42860424 gaatcgaacttgagacctcgaggaggagcacactc 42860390  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 7599978 - 7600015
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  7599978 agagaatcgaacatgaaacctcgaggaggagcacactc 7600015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 11251167 - 11251130
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacact 322  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  11251167 gagagaatcaaacctgagaccttgaggaggagcacact 11251130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 323
Target Start/End: Complemental strand, 28846766 - 28846733
Alignment:
Q  290 aatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||| ||||||||||||||||||    
T  28846766 aatcgaacctgagacatcgaggaggagcacactc 28846733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 31573638 - 31573675
Alignment:
Q  286 agagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||| || |||||||||||||||    
T  31573638 agagaatcgaacctgagacatcaaggaggagcacactc 31573675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 13519048 - 13519084
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacac 321  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  13519048 gagagaatcgaacttgagacctcaaggaggagcacac 13519084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 19016109 - 19016073
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  19016109 gagaatcaaacttgagacctcgaggaggagcacactc 19016073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 21213847 - 21213811
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  21213847 gagaatcgaacctgagacctcaaggaggaacacactc 21213811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 23052521 - 23052557
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| |||||| |||||||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactc 23052557  T

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Target: scaffold0194 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 13041 - 13080
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  13041 ggagagaatcgaacctgagaccttgaggaggagcacactc 13080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 2468 - 2504
Alignment:
Q  287 gagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||| ||||||||||||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactc 2504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 285 - 320
Target Start/End: Original strand, 836 - 871
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcaca 320  Q
    |||||||||||||||||||| |||||||||||||||    
T  836 gagagaatcgaacctgagacttcgaggaggagcaca 871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 49387 - 49348
Alignment:
Q  284 ggagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  49387 ggagagaatcgaacctgatacctcgaagaggagcacactc 49348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 2707 - 2745
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  2707 gagagaatcgaacctgagaccttgaggaggagcagactc 2745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 19958 - 19996
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  19958 gagagaatcgaacctgagaccttgaggaggagcatactc 19996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 41629 - 41667
Alignment:
Q  285 gagagaatcgaacctgagacctcgaggaggagcacactc 323  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  41629 gagagaattgaacctgagacctcgaggaggagcatactc 41667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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