View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8171_low_4 (Length: 442)
Name: NF8171_low_4
Description: NF8171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8171_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 426; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 1 - 430
Target Start/End: Original strand, 30138125 - 30138554
Alignment:
| Q |
1 |
taaccaaattaagccactgaagattgaaacaatccaaagggtgaaataattacgatcatcgggttctcgaagcatatggtaaatgaaagaagagataatg |
100 |
Q |
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| T |
30138125 |
taaccaaattaagccactgaagattgaaacaatccaaagggtgaaataattacgatcatcaggttctcgaagcatatggtaaatgaaagaagagataatg |
30138224 |
T |
|
| Q |
101 |
gctgaacctaaacaaccaaaagaagtagcataaagagagaagaaacttgaaactttgtttgttttggatttgttgaaggaagaaatcatgagagcaagat |
200 |
Q |
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| T |
30138225 |
gctgaacctaaacaaccaaaagaagtagcataaagagagaagaaacttgaaactttgtttgttttggatttgttgaaggaagaaatcatgagagcaagat |
30138324 |
T |
|
| Q |
201 |
ggtgagtgtgagatgaacttgcaactgtgctagctaagactatgaaagcaatgtagggaatgaagattaaggttgttttgaagaatcctgctggaagaca |
300 |
Q |
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| T |
30138325 |
ggtgagtgtgagatgaacttgcaactgtgctagctaagactatgaaagcaatgtagggaatgaagattaaggttgttttgaagaatcctgctggaagaca |
30138424 |
T |
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| Q |
301 |
gaagaaaactccaatgcctgtggatgctgctgtgattagggtttggtattggctgttaaggtggaaagagatgaaagtgaggattggaatggctaaggtt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30138425 |
gaagaaaactccaatgcctgtggatgctgctgtgattagggtttggtattggctgttaaggtggaaagagatgaaagtgaggattggaatggctaaggtt |
30138524 |
T |
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| Q |
401 |
aaacctgaagcccatgcaattgatgtccat |
430 |
Q |
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| T |
30138525 |
aaacctgaagcccatgcaattgatgtccat |
30138554 |
T |
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