View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8172_high_58 (Length: 208)

Name: NF8172_high_58
Description: NF8172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8172_high_58
NF8172_high_58
[»] chr3 (54 HSPs)
chr3 (52-208)||(37463078-37463234)
chr3 (1-62)||(37467376-37467437)
chr3 (1-62)||(41495042-41495103)
chr3 (1-62)||(13780639-13780700)
chr3 (1-62)||(13948379-13948440)
chr3 (1-62)||(14393059-14393120)
chr3 (1-62)||(16032568-16032629)
chr3 (1-62)||(38177698-38177759)
chr3 (1-62)||(20646197-20646258)
chr3 (1-62)||(29951493-29951554)
chr3 (1-62)||(30000647-30000708)
chr3 (1-62)||(49642817-49642878)
chr3 (1-62)||(17238977-17239038)
chr3 (1-62)||(22804078-22804139)
chr3 (1-62)||(31303429-31303490)
chr3 (1-62)||(47207749-47207810)
chr3 (7-62)||(11223612-11223667)
chr3 (1-62)||(6090775-6090836)
chr3 (1-62)||(13824112-13824173)
chr3 (1-62)||(16658673-16658734)
chr3 (1-62)||(49553544-49553605)
chr3 (6-62)||(53056782-53056838)
chr3 (1-62)||(15903241-15903303)
chr3 (1-62)||(28582149-28582210)
chr3 (1-62)||(40799917-40799978)
chr3 (1-62)||(47405476-47405537)
chr3 (6-62)||(11909079-11909135)
chr3 (1-57)||(12963145-12963201)
chr3 (6-62)||(14955475-14955531)
chr3 (6-62)||(45858804-45858860)
chr3 (4-62)||(2561234-2561292)
chr3 (1-58)||(12388931-12388988)
chr3 (1-62)||(12726285-12726346)
chr3 (5-62)||(14969374-14969431)
chr3 (1-62)||(18121677-18121738)
chr3 (1-62)||(18142807-18142868)
chr3 (1-58)||(19249471-19249528)
chr3 (1-62)||(19889000-19889061)
chr3 (1-58)||(20725130-20725187)
chr3 (1-62)||(46349899-46349960)
chr3 (1-58)||(52920449-52920506)
chr3 (6-62)||(20627486-20627542)
chr3 (6-62)||(24775589-24775645)
chr3 (6-62)||(29855457-29855513)
chr3 (6-62)||(51341051-51341107)
chr3 (27-62)||(11869137-11869172)
chr3 (4-62)||(12752683-12752741)
chr3 (1-62)||(25398310-25398371)
chr3 (6-62)||(33583277-33583334)
chr3 (29-62)||(2785136-2785169)
chr3 (2-58)||(12968350-12968406)
chr3 (4-48)||(15833442-15833486)
chr3 (4-48)||(15851048-15851092)
chr3 (6-62)||(22140812-22140868)
[»] chr2 (56 HSPs)
chr2 (112-207)||(9357761-9357856)
chr2 (108-208)||(9316608-9316708)
chr2 (101-206)||(7115095-7115200)
chr2 (95-208)||(9275101-9275214)
chr2 (95-208)||(9329179-9329292)
chr2 (1-62)||(18376907-18376968)
chr2 (1-62)||(20568751-20568812)
chr2 (1-62)||(25829172-25829233)
chr2 (112-208)||(10353701-10353797)
chr2 (105-208)||(9321556-9321659)
chr2 (1-62)||(13963979-13964040)
chr2 (1-62)||(30667027-30667088)
chr2 (73-206)||(9283608-9283738)
chr2 (1-62)||(9015371-9015432)
chr2 (1-62)||(20152036-20152097)
chr2 (1-62)||(30621254-30621315)
chr2 (1-62)||(30623875-30623936)
chr2 (112-208)||(10348362-10348458)
chr2 (4-62)||(24850667-24850725)
chr2 (107-208)||(9292508-9292609)
chr2 (1-62)||(10009751-10009812)
chr2 (1-62)||(22317631-22317692)
chr2 (1-62)||(23235045-23235106)
chr2 (1-62)||(25037260-25037321)
chr2 (1-62)||(25041367-25041428)
chr2 (1-62)||(28140620-28140681)
chr2 (1-62)||(40782515-40782576)
chr2 (4-62)||(6574124-6574182)
chr2 (1-62)||(21537249-21537310)
chr2 (1-54)||(22188111-22188164)
chr2 (1-62)||(24377139-24377200)
chr2 (1-62)||(38781437-38781498)
chr2 (112-208)||(8572959-8573055)
chr2 (7-62)||(28701230-28701285)
chr2 (1-59)||(19540454-19540512)
chr2 (1-62)||(22260444-22260505)
chr2 (1-62)||(24576073-24576134)
chr2 (1-62)||(24779381-24779442)
chr2 (1-58)||(41121724-41121781)
chr2 (1-51)||(22455002-22455052)
chr2 (1-51)||(25189436-25189486)
chr2 (1-51)||(39037654-39037704)
chr2 (5-62)||(31800888-31800945)
chr2 (104-168)||(10372481-10372545)
chr2 (111-194)||(10336429-10336512)
chr2 (6-53)||(28711708-28711755)
chr2 (4-62)||(1084047-1084105)
chr2 (6-62)||(6392676-6392733)
chr2 (1-53)||(23595579-23595629)
chr2 (7-52)||(31327977-31328022)
chr2 (7-52)||(31334698-31334743)
chr2 (6-62)||(22802503-22802559)
chr2 (6-62)||(45087185-45087241)
chr2 (1-58)||(26619106-26619163)
chr2 (6-62)||(34321937-34321993)
chr2 (6-62)||(35744001-35744057)
[»] scaffold0667 (1 HSPs)
scaffold0667 (111-208)||(5057-5154)
[»] scaffold0084 (3 HSPs)
scaffold0084 (1-62)||(49376-49437)
scaffold0084 (1-62)||(32529-32590)
scaffold0084 (6-62)||(351-407)
[»] chr8 (46 HSPs)
chr8 (1-62)||(12757817-12757878)
chr8 (1-62)||(19156232-19156293)
chr8 (1-62)||(33082893-33082954)
chr8 (1-62)||(602774-602835)
chr8 (1-62)||(17525783-17525844)
chr8 (1-62)||(17914495-17914556)
chr8 (1-62)||(39693571-39693632)
chr8 (1-62)||(16207342-16207403)
chr8 (1-62)||(16681357-16681418)
chr8 (1-62)||(17441862-17441922)
chr8 (1-62)||(17797458-17797519)
chr8 (1-58)||(18321217-18321274)
chr8 (1-62)||(18679851-18679912)
chr8 (1-62)||(23185280-23185341)
chr8 (1-62)||(24646374-24646435)
chr8 (1-62)||(29693351-29693412)
chr8 (1-62)||(16189020-16189081)
chr8 (1-62)||(17267510-17267571)
chr8 (1-62)||(18719037-18719098)
chr8 (5-62)||(23263666-23263723)
chr8 (1-53)||(43644932-43644984)
chr8 (1-62)||(19943271-19943333)
chr8 (1-62)||(18121163-18121224)
chr8 (21-62)||(20255619-20255660)
chr8 (6-62)||(1237678-1237734)
chr8 (6-62)||(15336142-15336198)
chr8 (6-62)||(15425207-15425263)
chr8 (6-62)||(15516511-15516567)
chr8 (1-53)||(19707542-19707594)
chr8 (5-62)||(30421482-30421541)
chr8 (10-62)||(45538493-45538545)
chr8 (1-60)||(20382450-20382509)
chr8 (1-62)||(17701781-17701842)
chr8 (1-62)||(18685451-18685512)
chr8 (1-62)||(18722700-18722761)
chr8 (1-62)||(18731045-18731106)
chr8 (1-58)||(19956399-19956456)
chr8 (1-62)||(21932919-21932980)
chr8 (6-62)||(24551315-24551371)
chr8 (6-62)||(45567955-45568011)
chr8 (1-62)||(40845441-40845502)
chr8 (7-62)||(9320610-9320666)
chr8 (6-62)||(21540985-21541041)
chr8 (1-55)||(22461699-22461753)
chr8 (6-62)||(22673819-22673875)
chr8 (14-62)||(36105244-36105292)
[»] chr7 (54 HSPs)
chr7 (1-62)||(2913665-2913726)
chr7 (1-62)||(21692327-21692388)
chr7 (1-62)||(10883230-10883291)
chr7 (1-62)||(13137952-13138013)
chr7 (1-62)||(13302850-13302911)
chr7 (1-62)||(16309964-16310025)
chr7 (1-62)||(13730732-13730793)
chr7 (1-62)||(13880144-13880205)
chr7 (1-62)||(15088560-15088621)
chr7 (1-54)||(21695441-21695494)
chr7 (1-62)||(23280015-23280076)
chr7 (1-62)||(44467104-44467165)
chr7 (1-62)||(11792947-11793008)
chr7 (1-58)||(15467956-15468013)
chr7 (1-62)||(16316614-16316675)
chr7 (2-63)||(19237099-19237160)
chr7 (1-62)||(21283430-21283491)
chr7 (1-62)||(28409079-28409140)
chr7 (1-62)||(29935415-29935476)
chr7 (1-62)||(30945413-30945474)
chr7 (1-62)||(33605725-33605786)
chr7 (6-62)||(14426592-14426648)
chr7 (1-53)||(39284630-39284682)
chr7 (1-62)||(2500078-2500139)
chr7 (1-62)||(5000879-5000940)
chr7 (1-62)||(11319445-11319506)
chr7 (1-62)||(12366805-12366866)
chr7 (1-62)||(13648769-13648830)
chr7 (1-58)||(13880629-13880686)
chr7 (1-62)||(22578078-22578139)
chr7 (1-62)||(30025945-30026006)
chr7 (1-62)||(30944380-30944441)
chr7 (4-62)||(9709859-9709917)
chr7 (4-62)||(14193157-14193215)
chr7 (1-51)||(16111952-16112002)
chr7 (1-62)||(24788181-24788242)
chr7 (1-62)||(28622413-28622474)
chr7 (1-62)||(48236959-48237020)
chr7 (6-62)||(35952745-35952801)
chr7 (1-51)||(13018573-13018623)
chr7 (1-62)||(9069602-9069663)
chr7 (1-58)||(9098307-9098364)
chr7 (1-62)||(33691769-33691830)
chr7 (6-54)||(4821519-4821567)
chr7 (6-62)||(15704556-15704612)
chr7 (6-62)||(16543077-16543133)
chr7 (6-62)||(16622529-16622585)
chr7 (6-62)||(19711070-19711126)
chr7 (6-62)||(12174397-12174454)
chr7 (6-62)||(16556695-16556751)
chr7 (6-62)||(16608911-16608967)
chr7 (1-50)||(13260684-13260733)
chr7 (1-58)||(13894059-13894116)
chr7 (16-48)||(16412046-16412078)
[»] chr5 (31 HSPs)
chr5 (1-62)||(21910596-21910657)
chr5 (1-62)||(7745729-7745790)
chr5 (1-62)||(21072276-21072337)
chr5 (4-63)||(13545547-13545606)
chr5 (1-60)||(17815008-17815067)
chr5 (1-62)||(23413010-23413071)
chr5 (1-62)||(33022704-33022765)
chr5 (1-62)||(6512467-6512525)
chr5 (1-51)||(642754-642804)
chr5 (1-62)||(19536337-19536398)
chr5 (1-62)||(20550935-20550995)
chr5 (1-62)||(41566470-41566531)
chr5 (6-62)||(4887067-4887123)
chr5 (4-62)||(31117920-31117978)
chr5 (1-62)||(89458-89519)
chr5 (6-62)||(11993933-11993989)
chr5 (1-53)||(21199048-21199100)
chr5 (6-62)||(30743025-30743081)
chr5 (1-51)||(6499279-6499329)
chr5 (1-51)||(23881107-23881157)
chr5 (1-62)||(26784394-26784455)
chr5 (9-62)||(32160814-32160867)
chr5 (14-58)||(25096863-25096907)
chr5 (14-58)||(25154833-25154877)
chr5 (1-48)||(12352845-12352892)
chr5 (1-51)||(9398781-9398831)
chr5 (1-50)||(21099752-21099801)
chr5 (6-62)||(15517014-15517070)
chr5 (18-62)||(26759206-26759250)
chr5 (18-62)||(26765555-26765599)
chr5 (6-62)||(29138442-29138498)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-62)||(519-580)
[»] scaffold0364 (1 HSPs)
scaffold0364 (1-58)||(6051-6108)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-62)||(1734-1795)
[»] chr6 (37 HSPs)
chr6 (1-62)||(20112744-20112805)
chr6 (1-55)||(15987277-15987331)
chr6 (1-62)||(15531668-15531729)
chr6 (1-62)||(18378358-18378419)
chr6 (1-62)||(23284608-23284669)
chr6 (1-62)||(24116872-24116933)
chr6 (2-62)||(14100484-14100544)
chr6 (4-62)||(18435603-18435661)
chr6 (1-62)||(15302244-15302305)
chr6 (1-62)||(19688810-19688871)
chr6 (1-62)||(20730748-20730809)
chr6 (6-62)||(20487962-20488018)
chr6 (1-62)||(9717887-9717948)
chr6 (1-62)||(13435576-13435637)
chr6 (1-62)||(26972272-26972333)
chr6 (1-61)||(21235169-21235229)
chr6 (1-52)||(19086202-19086253)
chr6 (1-56)||(26943620-26943675)
chr6 (1-62)||(12715464-12715525)
chr6 (1-62)||(13602216-13602277)
chr6 (1-58)||(19470714-19470771)
chr6 (1-62)||(21625145-21625206)
chr6 (1-62)||(22802185-22802246)
chr6 (1-62)||(29918061-29918122)
chr6 (1-62)||(32544309-32544370)
chr6 (14-58)||(10640466-10640510)
chr6 (6-62)||(15954752-15954808)
chr6 (1-61)||(16265195-16265255)
chr6 (1-44)||(25594112-25594155)
chr6 (1-62)||(34451712-34451773)
chr6 (6-62)||(21618293-21618349)
chr6 (6-62)||(12349042-12349098)
chr6 (6-62)||(12423310-12423366)
chr6 (16-60)||(19624038-19624082)
chr6 (1-62)||(16336171-16336232)
chr6 (29-62)||(19833076-19833109)
chr6 (6-58)||(16877262-16877314)
[»] chr4 (36 HSPs)
chr4 (1-62)||(9140950-9141011)
chr4 (1-62)||(12601139-12601200)
chr4 (1-62)||(29680556-29680617)
chr4 (1-62)||(37985624-37985685)
chr4 (112-208)||(26575453-26575549)
chr4 (1-58)||(14604923-14604980)
chr4 (1-62)||(16632478-16632539)
chr4 (1-62)||(19884740-19884801)
chr4 (1-62)||(55380328-55380389)
chr4 (1-62)||(3395628-3395689)
chr4 (1-62)||(3483759-3483820)
chr4 (1-58)||(6641722-6641779)
chr4 (1-62)||(14904368-14904429)
chr4 (1-62)||(19621073-19621134)
chr4 (1-62)||(22675532-22675593)
chr4 (6-62)||(29121413-29121469)
chr4 (1-62)||(19666410-19666471)
chr4 (1-62)||(37435547-37435608)
chr4 (1-62)||(45833432-45833493)
chr4 (6-62)||(10692894-10692950)
chr4 (6-62)||(10906660-10906716)
chr4 (4-62)||(10072976-10073034)
chr4 (4-62)||(13576126-13576184)
chr4 (16-62)||(14833449-14833495)
chr4 (1-62)||(413040-413101)
chr4 (1-62)||(56034612-56034673)
chr4 (6-62)||(54679973-54680029)
chr4 (1-62)||(12811190-12811248)
chr4 (1-55)||(11915738-11915792)
chr4 (1-62)||(19911892-19911954)
chr4 (1-51)||(40846137-40846187)
chr4 (5-62)||(16853545-16853602)
chr4 (1-62)||(17247282-17247343)
chr4 (6-62)||(8105680-8105737)
chr4 (13-62)||(25651116-25651165)
chr4 (4-48)||(33378444-33378488)
[»] chr1 (38 HSPs)
chr1 (1-62)||(19717567-19717628)
chr1 (1-62)||(22201712-22201773)
chr1 (1-62)||(28492380-28492441)
chr1 (1-62)||(12284466-12284527)
chr1 (1-58)||(21191845-21191902)
chr1 (1-62)||(22153900-22153961)
chr1 (1-62)||(22600158-22600219)
chr1 (1-62)||(32785913-32785974)
chr1 (1-58)||(33256331-33256388)
chr1 (1-58)||(33276503-33276560)
chr1 (1-62)||(35401852-35401913)
chr1 (1-62)||(48704247-48704308)
chr1 (1-62)||(10757464-10757525)
chr1 (1-62)||(20954449-20954510)
chr1 (1-62)||(22427333-22427394)
chr1 (1-62)||(39200968-39201029)
chr1 (4-62)||(22464785-22464843)
chr1 (1-62)||(1577910-1577971)
chr1 (1-62)||(2834733-2834794)
chr1 (1-62)||(29215840-29215901)
chr1 (1-62)||(36134233-36134293)
chr1 (1-62)||(38282609-38282670)
chr1 (6-62)||(25448542-25448598)
chr1 (5-62)||(1900392-1900449)
chr1 (1-62)||(2268574-2268635)
chr1 (1-54)||(12613798-12613851)
chr1 (1-62)||(16235272-16235333)
chr1 (1-58)||(17024944-17025001)
chr1 (6-62)||(35040214-35040270)
chr1 (1-51)||(21028836-21028886)
chr1 (1-62)||(2267132-2267193)
chr1 (1-62)||(23036503-23036564)
chr1 (1-62)||(30893135-30893196)
chr1 (9-62)||(14263427-14263480)
chr1 (6-62)||(7745066-7745122)
chr1 (1-51)||(26702116-26702166)
chr1 (1-62)||(30572240-30572301)
chr1 (6-62)||(48570207-48570263)
[»] scaffold0337 (1 HSPs)
scaffold0337 (2-62)||(14693-14753)
[»] scaffold0290 (1 HSPs)
scaffold0290 (2-62)||(18627-18687)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-61)||(377566-377626)
scaffold0004 (1-58)||(244294-244351)
scaffold0004 (1-45)||(220282-220326)
[»] scaffold0426 (1 HSPs)
scaffold0426 (1-62)||(13615-13676)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-62)||(5696-5757)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-62)||(10114-10175)
[»] scaffold0083 (2 HSPs)
scaffold0083 (1-62)||(25981-26042)
scaffold0083 (1-62)||(44710-44771)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-62)||(60060-60121)
scaffold0026 (1-62)||(7970-8031)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-58)||(212398-212455)
scaffold0005 (16-62)||(6204-6250)
[»] scaffold0193 (1 HSPs)
scaffold0193 (4-62)||(15841-15899)
[»] scaffold0861 (1 HSPs)
scaffold0861 (1-62)||(4953-5014)
[»] scaffold0411 (1 HSPs)
scaffold0411 (1-62)||(12253-12314)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-62)||(1704-1765)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-62)||(15161-15222)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-62)||(36781-36842)
scaffold0120 (1-62)||(42163-42224)
[»] scaffold1359 (1 HSPs)
scaffold1359 (6-62)||(661-717)
[»] scaffold0324 (1 HSPs)
scaffold0324 (1-53)||(10000-10052)
[»] scaffold0047 (2 HSPs)
scaffold0047 (1-53)||(9947-9999)
scaffold0047 (16-62)||(30283-30329)
[»] scaffold0043 (1 HSPs)
scaffold0043 (6-62)||(78372-78428)
[»] scaffold0012 (1 HSPs)
scaffold0012 (6-62)||(215503-215559)
[»] scaffold0003 (2 HSPs)
scaffold0003 (4-62)||(90061-90119)
scaffold0003 (16-48)||(758-790)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-62)||(10013-10074)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-62)||(9839-9900)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-62)||(22720-22781)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-62)||(19478-19539)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-62)||(20977-21038)
[»] scaffold0028 (1 HSPs)
scaffold0028 (5-62)||(5608-5665)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-62)||(103616-103677)
[»] scaffold1434 (1 HSPs)
scaffold1434 (22-62)||(792-832)
[»] scaffold1331 (1 HSPs)
scaffold1331 (6-62)||(1705-1761)
[»] scaffold0439 (1 HSPs)
scaffold0439 (6-62)||(6746-6802)
[»] scaffold0220 (1 HSPs)
scaffold0220 (6-62)||(1803-1859)
[»] scaffold0132 (1 HSPs)
scaffold0132 (6-62)||(38091-38147)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-53)||(159099-159151)
scaffold0022 (20-62)||(39488-39530)
scaffold0022 (20-62)||(137548-137590)
[»] scaffold0011 (1 HSPs)
scaffold0011 (6-62)||(164952-165008)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-62)||(27435-27496)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-58)||(74625-74682)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-36)||(2027-2062)
[»] scaffold0007 (1 HSPs)
scaffold0007 (4-62)||(143135-143193)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-62)||(7747-7808)
[»] scaffold0064 (1 HSPs)
scaffold0064 (9-54)||(43933-43978)
[»] scaffold0211 (1 HSPs)
scaffold0211 (6-62)||(15628-15684)
[»] scaffold0176 (1 HSPs)
scaffold0176 (6-62)||(9204-9260)
[»] scaffold0015 (1 HSPs)
scaffold0015 (6-62)||(60852-60908)
[»] scaffold0217 (1 HSPs)
scaffold0217 (4-62)||(19078-19136)
[»] scaffold1747 (1 HSPs)
scaffold1747 (1-50)||(1361-1410)
[»] scaffold1745 (1 HSPs)
scaffold1745 (1-50)||(1-50)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-58)||(40681-40738)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-58)||(1531-1588)
[»] scaffold0471 (1 HSPs)
scaffold0471 (14-62)||(3361-3409)


Alignment Details
Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 52 - 208
Target Start/End: Complemental strand, 37463234 - 37463078
Alignment:
Q  52 atcctttcaaaggtaacagccccaacatcgatccttacacacggcgtgacagcaccatggctcttatcggttcatgtaacggcctcctcgctatctccaa 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37463234 atcctttcaaaggtaacagccccaacatcgatccttacacacggcgtgacagcaccatggctcttatcggttcatgtaacggcctcctcgctatctccaa 37463135  T
Q  152 tggccaaatcgctttcacgcatcctaacgccgccaacgaaatcacaatctggaaccc 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37463134 tggccaaatcgctttcacgcatcctaacgccgccaacgaaatcacaatctggaaccc 37463078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37467376 - 37467437
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37467376 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 37467437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41495042 - 41495103
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41495042 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 41495103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13780700 - 13780639
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13780700 caattgtactttgtcaacgctcttcaaataacaagcatccaatgccttcaaatcctttcaaa 13780639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13948379 - 13948440
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13948379 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 13948440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14393120 - 14393059
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14393120 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 14393059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16032568 - 16032629
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16032568 caattgtactttgtcaatgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 16032629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38177759 - 38177698
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38177759 caattgtactttgtcaacgctctttaaagaacaagcatccaatgccttcaaatcctttcaaa 38177698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20646197 - 20646258
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20646197 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 20646258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29951554 - 29951493
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  29951554 caattgtactttgttaactctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 29951493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30000708 - 30000647
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  30000708 caattgtactttgttaactctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 30000647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 49642878 - 49642817
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  49642878 caattgtactttgtcaacgctcttaaaagaacaatcatccaatgccttcaaatcctttcaaa 49642817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17239038 - 17238977
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||    
T  17239038 caattgtactttgtcaacgctattcaaagaacaatcatccaatgctttcaaatcctttcaaa 17238977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22804139 - 22804078
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  22804139 caattgtactttgtcaacgctcttcaaagaacaatcatcgaatgccttcaagtcctttcaaa 22804078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31303429 - 31303490
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  31303429 caattgtactttgtcaacgctcttcaaagaacaaacatcaaatgtcttcaaatcctttcaaa 31303490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47207749 - 47207810
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  47207749 caattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcatttcaaa 47207810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 11223612 - 11223667
Alignment:
Q  7 tactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  11223612 tactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 11223667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6090775 - 6090836
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||| ||| || ||||||||||||| |||||||||||||||||||||||    
T  6090775 caattgtactttgtcaaagctttttaaagaacaagcattcaatgccttcaaatcctttcaaa 6090836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13824112 - 13824173
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||||    
T  13824112 caattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcatttcaaa 13824173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16658734 - 16658673
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||| | |||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  16658734 caattgtattatgtcaacgctcttcaaagaataagcatccaatgctttcaaatcctttcaaa 16658673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 49553605 - 49553544
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||   |||||||| |||||||||||||||||||||||||||    
T  49553605 caattgtactttgtcaacgctctctgaagaacaaacatccaatgccttcaaatcctttcaaa 49553544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 53056838 - 53056782
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  53056838 gtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 53056782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15903241 - 15903303
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaac-aagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||| ||||||||||||||||    
T  15903241 caattgtactttgtcaatgctcttcaaagaacaaagcatgcaatgctttcaaatcctttcaaa 15903303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28582149 - 28582210
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||| |||||||||||||||  |||||||||||||||||||| | |||||||||||||    
T  28582149 caattgtattttgtcaacgctctttgaagaacaagcatccaatgccattaaatcctttcaaa 28582210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40799917 - 40799978
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| ||||||||| ||||||||    
T  40799917 caattgtactttgtcaacgctctttgaagaacaagtatccaattccttcaaatactttcaaa 40799978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 47405537 - 47405476
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||| |||||  |||||||| |||| ||||||||||||||||||||||    
T  47405537 caattgtactttgtcaacactctttgaagaacaaacatcaaatgccttcaaatcctttcaaa 47405476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 11909135 - 11909079
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||| | ||||||||||||||||||||||||||||||    
T  11909135 gtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaa 11909079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12963201 - 12963145
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctt 57  Q
    |||||||||| ||||||| |||||||||||||||||||||||||| |||||| ||||    
T  12963201 caattgtactatgtcaacactcttcaaagaacaagcatccaatgctttcaaaacctt 12963145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 14955475 - 14955531
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||| ||||||||    
T  14955475 gtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatactttcaaa 14955531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 45858860 - 45858804
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||| | ||||||||||||||||||||||||||||||    
T  45858860 gtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaa 45858804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 2561234 - 2561292
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||| ||||  |||||||||||||||||  |||||||||||||||||    
T  2561234 ttgtactttgtcaacgatctttgaagaacaagcatccaatttcttcaaatcctttcaaa 2561292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12388988 - 12388931
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||| ||||| ||||||||||||||||| |||||||||||||||| |||| ||||    
T  12388988 caattgtcctttgccaacgctcttcaaagaagaagcatccaatgccttaaaattcttt 12388931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12726346 - 12726285
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||| ||| ||||| |||||  ||||||||||||| ||||||||||||||||    
T  12726346 caattgtactttgttaactctctttaaagagtaagcatccaatgctttcaaatcctttcaaa 12726285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 14969374 - 14969431
Alignment:
Q  5 tgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||| ||  ||||| |||||||||||||| |||||||||||||||    
T  14969374 tgtactttgtcaacgctatttgaagaataagcatccaatgccatcaaatcctttcaaa 14969431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18121738 - 18121677
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||| |||||||||  ||||| |||||| ||||||||| |||||||||||||    
T  18121738 caattgtactttgtaaacgctctttgaagaaaaagcattcaatgcctttaaatcctttcaaa 18121677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18142868 - 18142807
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||| |||||||||  ||||| |||||| ||||||||| |||||||||||||    
T  18142868 caattgtactttgtaaacgctctttgaagaaaaagcattcaatgcctttaaatcctttcaaa 18142807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19249528 - 19249471
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||| || | ||| ||||||||||||||||| |||||||||||||||||||||||    
T  19249528 caattgtcctatttcagcgctcttcaaagaacaaacatccaatgccttcaaatccttt 19249471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19889061 - 19889000
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||| | ||||||  || ||||||||||||||||||||||| ||||||||||||||||    
T  19889061 caattgtaatatgtcaatcctattcaaagaacaagcatccaatgctttcaaatcctttcaaa 19889000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20725130 - 20725187
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||| |||| ||||||||||||||  ||||||||||||||| |||||||||||||    
T  20725130 caattgtcctttttcaacgctcttcaagaaacaagcatccaatgtcttcaaatccttt 20725187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 46349960 - 46349899
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||| |||||||||||| | |||   ||||||||||||||||||||||||||||||||||||    
T  46349960 caatcgtactttgtcaatgttctctgaagaacaagcatccaatgccttcaaatcctttcaaa 46349899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 52920449 - 52920506
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||| || ||||||||||||||| |||||||||||||| ||||||||||||| ||||    
T  52920449 caattttaatttgtcaacgctctttaaagaacaagcatcaaatgccttcaaatacttt 52920506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 20627542 - 20627486
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  |  |||||||||||||||||||||||||| ||||||    
T  20627542 gtactttgtcaacgctctttgataaacaagcatccaatgccttcaaatccattcaaa 20627486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 24775645 - 24775589
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||| ||||||  ||||| |||||| |||||||||||||||||||||||    
T  24775645 gtactttgtcaaagctctttgaagaataagcattcaatgccttcaaatcctttcaaa 24775589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 29855457 - 29855513
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||| ||  ||||||||||||||||||||||||||| ||||||||    
T  29855457 gtactctgtcaacgctttttgaagaacaagcatccaatgccttcaaattctttcaaa 29855513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 51341051 - 51341107
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||| | ||||||||||||||||||| ||||||||||    
T  51341051 gtactttgtcaacgctctttgaaggataagcatccaatgccttcaattcctttcaaa 51341107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 11869137 - 11869172
Alignment:
Q  27 aagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||    
T  11869137 aagaacaagcatccaatgccttcaaatcctttcaaa 11869172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 12752741 - 12752683
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||  ||| | ||| ||||||||||||||| ||||||||||    
T  12752741 ttgtactttgtcaacgctctttgaaggataagtatccaatgccttcaattcctttcaaa 12752683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25398371 - 25398310
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||| ||||||||||||||||  |||| |||  || |||||||||||||||||||||||    
T  25398371 caattgtgctttgtcaacgctctttgaagagcaaatatgcaatgccttcaaatcctttcaaa 25398310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 33583277 - 33583334
Alignment:
Q  6 gtactttgtcaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||   || |||||||||||||||| ||||||||||||||||    
T  33583277 gtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaa 33583334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 2785136 - 2785169
Alignment:
Q  29 gaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||| ||||||||||||||||    
T  2785136 gaacaagcatccaatgcgttcaaatcctttcaaa 2785169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 12968350 - 12968406
Alignment:
Q  2 aattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    |||||| ||||  ||||| ||||||||||| ||| ||||||||||||||||| ||||    
T  12968350 aattgtccttttccaacgttcttcaaagaataagtatccaatgccttcaaattcttt 12968406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 15833442 - 15833486
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 48  Q
    ||||||||||||||| |||||  ||| ||||||||||||||||||    
T  15833442 ttgtactttgtcaactctctttgaaggacaagcatccaatgcctt 15833486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 15851048 - 15851092
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 48  Q
    ||||||||||||||| |||||  ||| ||||||||||||||||||    
T  15851048 ttgtactttgtcaactctctttgaaggacaagcatccaatgcctt 15851092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 22140812 - 22140868
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||||||  ||||||||||||||||||  |||||| || ||||||    
T  22140812 gtactatgtcaacgctctttgaagaacaagcatccaatgttttcaaaacccttcaaa 22140868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 9357856 - 9357761
Alignment:
Q  112 ctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgcatcctaacgccgccaacgaaatcacaatctggaacc 207  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  9357856 ctcttatcggttcatgtaacggcctcctcgccatctccaatggcgaaatcgctttcaggcatcctaacgccgccaacgaaatctcaatctggaacc 9357761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 108 - 208
Target Start/End: Complemental strand, 9316708 - 9316608
Alignment:
Q  108 atggctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgcatcctaacgccgccaacgaaatcacaatctggaacc 207  Q
    ||||||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  9316708 atggctcttctcggttcatgtaacggccttctcgccatttccaatggtcaaatcgctttcatgcatccttacggcgccaacgaaatcacaatctggaacc 9316609  T
Q  208 c 208  Q
    |    
T  9316608 c 9316608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 7115095 - 7115200
Alignment:
Q  101 cagcaccatggctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgcatcctaacgccgccaacgaaatcacaatc 200  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||   ||| |  ||||||||||||    
T  7115095 cagctccatggatcttatcggttcatgtaacggcctcctcgccatctccaatggccaaatcgcttttacgtatcctaatcacgcaactgaaatcacaatc 7115194  T
Q  201 tggaac 206  Q
    ||||||    
T  7115195 tggaac 7115200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 9275214 - 9275101
Alignment:
Q  95 gcgtgacagcaccatggctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgcatcctaacgccgccaacgaaatc 194  Q
    |||| ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| ||| |||| ||||||| |||  || || |||||     
T  9275214 gcgtaacagcaccatggctcttataggttcatgtaacggcctcattgctatctccaatggccaaaccgccttcaggcatcctgacgatgcaaatgaaatt 9275115  T
Q  195 acaatctggaaccc 208  Q
    ||||||||||||||    
T  9275114 acaatctggaaccc 9275101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 9329292 - 9329179
Alignment:
Q  95 gcgtgacagcaccatggctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgcatcctaacgccgccaacgaaatc 194  Q
    |||| |||||| ||||| ||||||||||||||| ||||||||| | ||||||||| |||||||||||||||| | | | ||||||| | |||||||||||    
T  9329292 gcgtaacagcaacatgggtcttatcggttcatgcaacggcctcattgctatctcctatggccaaatcgcttttagggaccctaacggccccaacgaaatc 9329193  T
Q  195 acaatctggaaccc 208  Q
    ||||||||||||||    
T  9329192 acaatctggaaccc 9329179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18376968 - 18376907
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18376968 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 18376907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20568812 - 20568751
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20568812 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 20568751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25829172 - 25829233
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25829172 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 25829233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 10353797 - 10353701
Alignment:
Q  112 ctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgcatcctaacgccgccaacgaaatcacaatctggaaccc 208  Q
    ||||||||||||||||||||||||||||||| || ||| | |||  ||| ||||||||||||||||||||| |||||||||||||||| ||||||||    
T  10353797 ctcttatcggttcatgtaacggcctcctcgccatgtcccacggcgtaatagctttcacgcatcctaacgcccccaacgaaatcacaatatggaaccc 10353701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 105 - 208
Target Start/End: Complemental strand, 9321659 - 9321556
Alignment:
Q  105 accatggctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgcatcctaacgccgccaacgaaatcacaatctgga 204  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| | |||||| | |||||||  |||||||||  | |||||||||||||||||||||    
T  9321659 accatggctcttatcggttcctgtaacggcctcctcgccatctcccacggccaactggctttcaatcatcctaacaaccccaacgaaatcacaatctgga 9321560  T
Q  205 accc 208  Q
    ||||    
T  9321559 accc 9321556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13964040 - 13963979
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13964040 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaattctttcaaa 13963979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30667027 - 30667088
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30667027 caattgtactttgtcaacgctcttcaaagatcaagcatccaatgccttcaaatcctttcaaa 30667088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 73 - 206
Target Start/End: Original strand, 9283608 - 9283738
Alignment:
Q  73 ccaacatcgatccttacacacggcgtgacagcaccatggctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgca 172  Q
    ||||||||||||||| |||   || | |||||| || ||||||||| ||||||||||||||||||||||| |||| |||||||| ||| ||||| |||||    
T  9283608 ccaacatcgatcctttcac---gcttaacagcatcaaggctcttattggttcatgtaacggcctcctcgccatctacaatggcccaattgcttttacgca 9283704  T
Q  173 tcctaacgccgccaacgaaatcacaatctggaac 206  Q
    ||| |||| ||| |  ||||||||||||||||||    
T  9283705 tccaaacgacgcaactgaaatcacaatctggaac 9283738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9015432 - 9015371
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  9015432 caattgtactttgtcaacgctcttcaaagaataagcatccaatgctttcaaatcctttcaaa 9015371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20152097 - 20152036
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  20152097 caattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 20152036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30621254 - 30621315
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  30621254 caattgtactttgtcaacgctcttcaaagatcaaacatccaatgccttcaaatcctttcaaa 30621315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30623875 - 30623936
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  30623875 caattgtactttgtcaacgctcttcaaagatcaaacatccaatgccttcaaatcctttcaaa 30623936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 10348458 - 10348362
Alignment:
Q  112 ctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgcatcctaacgccgccaacgaaatcacaatctggaaccc 208  Q
    ||||||||||||||||||||||||||||||| |||||||  ||   ||||| ||||||||||||||||  |  ||||||||||||||||||||||||    
T  10348458 ctcttatcggttcatgtaacggcctcctcgccatctccacaggggtaatcgttttcacgcatcctaacaacctcaacgaaatcacaatctggaaccc 10348362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 24850725 - 24850667
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  24850725 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgctttgaaatcctttcaaa 24850667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 9292609 - 9292508
Alignment:
Q  107 catggctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgcatcctaacgccgccaacgaaatcacaatctggaac 206  Q
    |||| ||||||| ||||||||||||||||||||||| || |||||| ||||||||   |||||||||||| ||||| | |||||||||||| ||| ||||    
T  9292609 catgcctcttattggttcatgtaacggcctcctcgccatttccaatagccaaatctgcttcacgcatccttacgcccctaacgaaatcacagtcttgaac 9292510  T
Q  207 cc 208  Q
    ||    
T  9292509 cc 9292508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10009812 - 10009751
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  10009812 caattgtactatgtcaacgttcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 10009751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22317631 - 22317692
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  22317631 caattgtactttgtcaacgctctttgaagaacaagcatccaatgcctttaaatcctttcaaa 22317692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23235045 - 23235106
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  23235045 caattgtactttgtcaacactcttcaaagaataagcatccaatgccttcaaattctttcaaa 23235106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25037321 - 25037260
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||    
T  25037321 caattgtactttgtcaacgcttttcaaagaacaaacatccaatgctttcaaatcctttcaaa 25037260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25041428 - 25041367
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||    
T  25041428 caattgtactttgtcaacgcttttcaaagaacaaacatccaatgctttcaaatcctttcaaa 25041367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28140681 - 28140620
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  28140681 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgttttcaaatcctttcaaa 28140620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40782515 - 40782576
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  40782515 caattgtactatgtcaacgctcttcaaagaacaaacatccaatgctttcaaatcctttcaaa 40782576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 6574182 - 6574124
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  6574182 ttgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaa 6574124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21537310 - 21537249
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||| | |||||||||||||||| |||| |||||||||    
T  21537310 caattgtactttgtcaacgctcttcaaaaagcaagcatccaatgcctccaaaacctttcaaa 21537249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22188164 - 22188111
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatc 54  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  22188164 caattatactttgttaacgctcttcaaagaacaagcatccaatgccttcaaatc 22188111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24377139 - 24377200
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  24377139 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgctctcaaaacctttcaaa 24377200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38781437 - 38781498
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||||    
T  38781437 caattgtactttgtcaacgctctttgaagaacaatcattcaatgccttcaaatcctttcaaa 38781498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 112 - 208
Target Start/End: Original strand, 8572959 - 8573055
Alignment:
Q  112 ctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgcatcctaacgccgccaacgaaatcacaatctggaaccc 208  Q
    ||||||||||||||||||||||||||||||| || || |||||   ||||||||| || || ||||| | ||||||| ||||| |||||||||||||    
T  8572959 ctcttatcggttcatgtaacggcctcctcgccatttctaatggtttaatcgctttgactcaacctaatgacgccaaccaaatcgcaatctggaaccc 8573055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 28701285 - 28701230
Alignment:
Q  7 tactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||||||||    
T  28701285 tactttgtcaacgccctttgaagaacaagcatccaatgccttcaaatcctttcaaa 28701230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19540454 - 19540512
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttc 59  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  19540454 caattgtactatgtcaacgctctttaaagaacaagcatccaataccttcaaaacctttc 19540512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22260444 - 22260505
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||| ||||||||||||||||||||||| | ||||||||||||| ||||    
T  22260444 caattgtactatgtcaaagctcttcaaagaacaagcatccagttccttcaaatccttccaaa 22260505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24576073 - 24576134
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||| |||||||| |||||| || |||||||||| |||||||||||||    
T  24576073 caattgtactttgtcaactctcttcaacgaacaaacaaccaatgcctttaaatcctttcaaa 24576134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24779381 - 24779442
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||||| ||||||||||||||| ||||| |||| ||||||||||||||||    
T  24779381 caattgtactatgtcaacactcttcaaagaacaaacatccgatgctttcaaatcctttcaaa 24779442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41121781 - 41121724
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||||||||||||| |||||||||||| |||  ||||||||||||||||||||||    
T  41121781 caattgtactttgtcaatgctcttcaaagagcaataatccaatgccttcaaatccttt 41121724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22455052 - 22455002
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaa 51  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  22455052 caattgtactttgtcaacgcttttcaaaaagcaagcatccaatgccttcaa 22455002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25189436 - 25189486
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaa 51  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  25189436 caattgtactttgtcaacgctcttcaaaaagcaagaatccaatgccttcaa 25189486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39037704 - 39037654
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaa 51  Q
    |||||||||||||||||||||||||||| | |||||||| |||||||||||    
T  39037704 caattgtactttgtcaacgctcttcaaaaagcaagcatctaatgccttcaa 39037654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 31800945 - 31800888
Alignment:
Q  5 tgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||  |||| ||| |||||||||| ||||||||||||||||    
T  31800945 tgtactttgtcaacgctctttgaagatcaaacatccaatgctttcaaatcctttcaaa 31800888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 10372545 - 10372481
Alignment:
Q  104 caccatggctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttca 168  Q
    ||||||| ||| ||||||||||||||||||||||||||| |||| ||| ||| || |||||||||    
T  10372545 caccatgactcgtatcggttcatgtaacggcctcctcgccatctgcaacggcaaattcgctttca 10372481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 10336512 - 10336429
Alignment:
Q  111 gctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgcatcctaacgccgccaacgaaatc 194  Q
    |||||| | |||||||| || ||||||||||| |||||||||||| |||||||||||||  | ||| || ||||||| ||||||    
T  10336512 gctcttcttggttcatgcaatggcctcctcgccatctccaatggcgaaatcgctttcactaacccttactccgccaatgaaatc 10336429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 28711755 - 28711708
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaat 53  Q
    ||||||| |||||||||||  |||||||||||||||||||||||||||    
T  28711755 gtactttttcaacgctctttgaagaacaagcatccaatgccttcaaat 28711708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 1084047 - 1084105
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||  ||| | ||||||| ||||||||||| ||||||||||    
T  1084047 ttgtactttgtcaacgctctttgaaggataagcatctaatgccttcaattcctttcaaa 1084105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 6392676 - 6392733
Alignment:
Q  6 gtactttgtcaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||   || |||||||||||||||| ||||||||||||||||    
T  6392676 gtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaa 6392733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23595629 - 23595579
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaat 53  Q
    |||||||||||||||||||||  ||| |||||||| |||||||||||||||||    
T  23595629 caattgtactttgtcaacgct--tcagagaacaagaatccaatgccttcaaat 23595579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 31328022 - 31327977
Alignment:
Q  7 tactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 52  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||    
T  31328022 tactttgtcaacgctctttgaagaacaagcatccaatgctttcaaa 31327977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 31334743 - 31334698
Alignment:
Q  7 tactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 52  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||    
T  31334743 tactttgtcaacgctctttgaagaacaagcatccaatgctttcaaa 31334698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 22802503 - 22802559
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||| |||||  ||||| |||||||  |||||||||||||||||||||    
T  22802503 gtactttgtcaactctctttgaagaataagcatcatatgccttcaaatcctttcaaa 22802559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 45087241 - 45087185
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||   |||| ||||||| ||||| ||||||||||||||||    
T  45087241 gtactttgtcaacgctcttttgagaataagcatctaatgcattcaaatcctttcaaa 45087185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26619163 - 26619106
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||| |||| |||||| ||| ||||||| |||||| |||||||||||||| ||||    
T  26619163 caattgtcctttttcaacgttctccaaagaataagcattcaatgccttcaaattcttt 26619106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 34321993 - 34321937
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||||||  ||||| ||| ||||||||||||  ||||||||||||    
T  34321993 gtactatgtcaacgctctttgaagaataagaatccaatgcctttcaatcctttcaaa 34321937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 35744057 - 35744001
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||||||  |||||  ||||| |||||||||||||||||| ||||    
T  35744057 gtactatgtcaacgctctttgaagaattagcattcaatgccttcaaatccttccaaa 35744001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0667 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 5154 - 5057
Alignment:
Q  111 gctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgcatcctaacgccgccaacgaaatcacaatctggaaccc 208  Q
    ||||||||||||||||||||||||||||||||  | ||||| ||| |||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  5154 gctcttatcggttcatgtaacggcctcctcgccgtttccaacggcgaaatcgctctcagacatcctaacgccgccaacgaaatcacaatctggaaccc 5057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 62; Significance: 6e-27; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 49376 - 49437
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49376 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 49437  T

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Target: scaffold0084; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32529 - 32590
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  32529 caattgtactttgtcaacgctcttcaaagaacaagcatcaaatgcattcaaatcctttcaaa 32590  T

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Target: scaffold0084; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 407 - 351
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||| | ||||||||||||||||||||||||||||||    
T  407 gtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaa 351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 6e-27; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12757878 - 12757817
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12757878 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 12757817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19156232 - 19156293
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19156232 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 19156293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33082893 - 33082954
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33082893 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 33082954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 602835 - 602774
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  602835 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 602774  T

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Target: chr8; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17525844 - 17525783
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17525844 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 17525783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17914495 - 17914556
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17914495 caattgtactttgtcaacgctcttcaaagaacaagcatctaatgccttcaaatcctttcaaa 17914556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39693571 - 39693632
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39693571 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 39693632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16207342 - 16207403
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  16207342 caattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 16207403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16681418 - 16681357
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16681418 caattgtactatgtcaacgctcttcaaagaacaagcatctaatgccttcaaatcctttcaaa 16681357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17441922 - 17441862
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  17441922 caattgtactttgtcaacgctcttcaaagaataagcatccaatg-cttcaaatcctttcaaa 17441862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17797458 - 17797519
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  17797458 caattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaattcctttcaaa 17797519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18321274 - 18321217
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  18321274 caattgtactttgtcaacgcccttcaaagaacaagcatccaatgccctcaaatccttt 18321217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18679851 - 18679912
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  18679851 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctatcaaa 18679912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23185341 - 23185280
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  23185341 caattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaa 23185280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24646374 - 24646435
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  24646374 caattgtactttgtcaacactcttcaaagaataagcatccaatgcctgcaaatcctttcaaa 24646435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29693351 - 29693412
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  29693351 caattgtactttgtcaaagctcttcaaagaacaagcatacaatgctttcaaatcctttcaaa 29693412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16189020 - 16189081
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||||    
T  16189020 caattgtactttgtcaacgctcttagaagaataagcatccaatgccttcaaatcatttcaaa 16189081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17267510 - 17267571
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  17267510 caattgtactatgtcaatgctcttcaaagaacaagcatctaatgctttcaaatcctttcaaa 17267571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18719037 - 18719098
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| || ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  18719037 caattgtactatgacaacgctcttcaaagaacaagcatccaatgctttcaaatcctatcaaa 18719098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 23263723 - 23263666
Alignment:
Q  5 tgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  23263723 tgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaa 23263666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43644932 - 43644984
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaat 53  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  43644932 caattgtactttattaacgctcttcaaagaacaagcatccaatgccttcaaat 43644984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19943271 - 19943333
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||    
T  19943271 caattttactttgtcaacgctttttaaaggaacaagcatccaatgccttcaaatcctttcaaa 19943333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18121224 - 18121163
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||| || ||||||  |||||||||||||||||||||| |||||||||||||    
T  18121224 caattgtactttgttaatgctctttgaagaacaagcatccaatgcctttaaatcctttcaaa 18121163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 20255660 - 20255619
Alignment:
Q  21 tcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20255660 tcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 20255619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 1237678 - 1237734
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||    
T  1237678 gtactttgtcaacgctctttgaagaacaaatatccaatgccttcaaatcctttcaaa 1237734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 15336198 - 15336142
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  | ||| ||||||||||||||||||||||||||||||    
T  15336198 gtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaa 15336142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 15425263 - 15425207
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  | ||| ||||||||||||||||||||||||||||||    
T  15425263 gtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaa 15425207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 15516567 - 15516511
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  | ||| ||||||||||||||||||||||||||||||    
T  15516567 gtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaa 15516511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19707542 - 19707594
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaat 53  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  19707542 caattgtactttgtcaacgttcttcaaagaacaaccattcaatgccttcaaat 19707594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 30421541 - 30421482
Alignment:
Q  5 tgtactttgtcaacgctcttc--aaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||    
T  30421541 tgtactttgtcaacgctctttgaaaagaacaagcatccaatgccttcaaatccattcaaa 30421482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 45538545 - 45538493
Alignment:
Q  10 tttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  45538545 tttgtcaacgctctttgaagaacaagcatccaatgtcttcaaatcctttcaaa 45538493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20382509 - 20382450
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttca 60  Q
    |||||||||| ||||||||||||||||||||||| |||||| | | ||||||||||||||    
T  20382509 caattgtactatgtcaacgctcttcaaagaacaaacatccactactttcaaatcctttca 20382450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17701781 - 17701842
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| ||||||| |||||||||| || |||  |||||||||||||||||||||||||||||    
T  17701781 caattatactttgccaacgctcttaaaggaattagcatccaatgccttcaaatcctttcaaa 17701842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18685512 - 18685451
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||| ||| ||||||||||||||| || ||||||| ||||||||||||| ||||||||    
T  18685512 caattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttcaaattctttcaaa 18685451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18722761 - 18722700
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||| ||| ||||||||||||||| || ||||||| ||||||||||||| ||||||||    
T  18722761 caattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttcaaattctttcaaa 18722700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18731106 - 18731045
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||| ||| ||||||||||||||| || ||||||| ||||||||||||| ||||||||    
T  18731106 caattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttcaaattctttcaaa 18731045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19956456 - 19956399
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||| |||| |||||||||||||| ||| ||| ||||||||||||||||||||||    
T  19956456 caattgtcctttttcaacgctcttcaatgaaaaagtatccaatgccttcaaatccttt 19956399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21932919 - 21932980
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| ||||||||||||||||||  || ||||||||| ||||||||| |||||||||||||    
T  21932919 caattttactttgtcaacgctctttgaaaaacaagcatacaatgcctttaaatcctttcaaa 21932980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 24551315 - 24551371
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| ||| |||||||||  |||||||||||||||||||||||||||| |||||||    
T  24551315 gtactatgttaacgctctttgaagaacaagcatccaatgccttcaaatcttttcaaa 24551371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 45568011 - 45567955
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||| | || |||||||||||||||||||||||||||    
T  45568011 gtactttgtcaacgctctttgaaggataatcatccaatgccttcaaatcctttcaaa 45567955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40845502 - 40845441
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||| ||||| |||||||||||||  ||||| ||||||||||||||||| ||||||| ||||    
T  40845502 caatcgtactatgtcaacgctctttgaagaataagcatccaatgccttccaatccttccaaa 40845441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 9320610 - 9320666
Alignment:
Q  7 tactttgtcaacgctcttca-aagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||   ||||| ||||||||||||| ||||||||||||||||    
T  9320610 tactttgtcaacgctcttttgaagaataagcatccaatgcgttcaaatcctttcaaa 9320666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 21540985 - 21541041
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||| | ||||||||||||||||| | ||||||||||    
T  21540985 gtactttgtcaacgctctttgaaggataagcatccaatgccttctattcctttcaaa 21541041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22461753 - 22461699
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 55  Q
    ||||||| |||| ||||| |||| ||| ||| |||||||||||||||||||||||    
T  22461753 caattgtcctttttcaactctctccaacgaataagcatccaatgccttcaaatcc 22461699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 22673819 - 22673875
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||||||  ||||| |||||||||||| |||| ||||||| ||||    
T  22673819 gtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatccttccaaa 22673875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 36105244 - 36105292
Alignment:
Q  14 tcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||  ||||| || |||||||||||||||||||||| ||||    
T  36105244 tcaacgctctttgaagaataaacatccaatgccttcaaatccttccaaa 36105292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 6e-27; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2913726 - 2913665
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2913726 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 2913665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21692327 - 21692388
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21692327 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 21692388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10883291 - 10883230
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10883291 caattgtactttgtcaacgctcttcaaagaacaggcatccaatgccttcaaatcctttcaaa 10883230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13138013 - 13137952
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13138013 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcttttcaaa 13137952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13302850 - 13302911
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13302850 caattgtactttgtcaacgctcttcaaagaacaagcatctaatgccttcaaatcctttcaaa 13302911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16310025 - 16309964
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16310025 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 16309964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13730793 - 13730732
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  13730793 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgcattcaaatcttttcaaa 13730732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13880144 - 13880205
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  13880144 caattgtactttgtcaacgctcttcaaagaataagcatctaatgccttcaaatcctttcaaa 13880205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15088560 - 15088621
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  15088560 caattgtactttgtcaacgctcttaaaagaacaagcatccaatgtcttcaaatcctttcaaa 15088621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21695441 - 21695494
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatc 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21695441 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatc 21695494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23280076 - 23280015
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  23280076 caattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 23280015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44467104 - 44467165
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  44467104 caattgtactttgtcaacactctttaaagaacaagcatccaatgccttcaaatcctttcaaa 44467165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11792947 - 11793008
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  11792947 caattgtactttgtcaacgctcttcaaagaacaagcatcaaatgctttcaaatgctttcaaa 11793008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15467956 - 15468013
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  15467956 caattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatccttt 15468013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16316675 - 16316614
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16316675 caattgtactatttcaacgctcttcaaagaacaagcatccaatggcttcaaatcctttcaaa 16316614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 19237160 - 19237099
Alignment:
Q  2 aattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaag 63  Q
    ||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  19237160 aattgtagtttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaag 19237099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21283491 - 21283430
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||    
T  21283491 caattgtactttgtcaacgctctttgaataacaagcatccaatgccttcaaatcctttcaaa 21283430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28409079 - 28409140
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  28409079 caattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaa 28409140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29935476 - 29935415
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  29935476 caattgtactatgtcaacgctctttaaagaacaagcatccaatgctttcaaatcctttcaaa 29935415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30945474 - 30945413
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  30945474 caattgtactttgtcaacgctctttgaggaacaagcatccaatgccttcaaatcctttcaaa 30945413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33605725 - 33605786
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  33605725 caatcgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 33605786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 14426592 - 14426648
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  14426592 gtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 14426648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39284682 - 39284630
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaat 53  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39284682 caattgtactttgtcaacgctcttcaaagaacaaacatccaatgccttcaaat 39284630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2500078 - 2500139
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||| |||||||||| | ||||||||||||| ||||||||||||||||    
T  2500078 caattgtactttgtcaactctcttcaaaggataagcatccaatgctttcaaatcctttcaaa 2500139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5000940 - 5000879
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||| |||||||||||||||||| |||||| ||||||||||||||||    
T  5000940 caattgtactatgtcaacgttcttcaaagaacaagcattcaatgctttcaaatcctttcaaa 5000879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11319445 - 11319506
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||| ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||    
T  11319445 caattgtaatttgtcaacgctcttcaaaaaacacgcatccaatgcattcaaatcctttcaaa 11319506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12366866 - 12366805
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  12366866 caattgtactatgtcaacgctcttcaaagaacagacatccaatgctttcaaatcctttcaaa 12366805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13648769 - 13648830
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||||||||||||||||| ||||||||||||| ||| |||||||||||||    
T  13648769 caattgtactatgtcaacgctcttcaaagatcaagcatccaatgtctttaaatcctttcaaa 13648830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13880629 - 13880686
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  13880629 caattgtcctttttcaacgctcttcaaagaacaagcatccagtgccttcaaatccttt 13880686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22578139 - 22578078
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||||    
T  22578139 caattgtactttgtcaacgctcttttaagaacaatcattcaatgccttcaaatcctttcaaa 22578078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30025945 - 30026006
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||||||    
T  30025945 caattgtactttgtcaacgctcttaaaagaacaagcatcgaatgccttcaattcttttcaaa 30026006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30944441 - 30944380
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  30944441 caattgtattttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaa 30944380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 9709917 - 9709859
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||| |||||||||||||  ||||||||||||| ||||||||||||||||||||||    
T  9709917 ttgtactatgtcaacgctctttgaagaacaagcatctaatgccttcaaatcctttcaaa 9709859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 14193157 - 14193215
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||| |||||||||  |||||||||||| |||||||||||||||||||||||    
T  14193157 ttgtactttgttaacgctctttgaagaacaagcattcaatgccttcaaatcctttcaaa 14193215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16112002 - 16111952
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaa 51  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  16112002 caattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaa 16111952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24788181 - 24788242
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||  |||||  ||||||||||| ||||||||||||||||||||||||    
T  24788181 caattgtactttgtcaattctctttgaagaacaagcacccaatgccttcaaatcctttcaaa 24788242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28622474 - 28622413
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||| |||  || ||||| |||||||||||||||||||||||||||    
T  28622474 caattgtactttgtcaacgccctttgaaaaacaaacatccaatgccttcaaatcctttcaaa 28622413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48237020 - 48236959
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||| |||||||  |||||||||||||||||||||    
T  48237020 caattgtactttgtcaacgctctttgaagaataagcatctgatgccttcaaatcctttcaaa 48236959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 35952801 - 35952745
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  | |||||| |||||||||||||||||||||||||||    
T  35952801 gtactttgtcaacgctctttgatgaacaaacatccaatgccttcaaatcctttcaaa 35952745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13018623 - 13018573
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaa 51  Q
    |||||||||||||||||||||||||||| | | ||||||||||||||||||    
T  13018623 caattgtactttgtcaacgctcttcaaaaatccagcatccaatgccttcaa 13018573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9069602 - 9069663
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||| |||| |  |||||||||||| ||||||||| |||||||||||||    
T  9069602 caattgtactttgtcaatgctccttgaagaacaagcatacaatgcctttaaatcctttcaaa 9069663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9098364 - 9098307
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||| |||| ||||||||||||||||||||| |||| ||||| ||||||||||||    
T  9098364 caattgtcctttttcaacgctcttcaaagaacaaacatctaatgcattcaaatccttt 9098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33691830 - 33691769
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||||||| || ||||| |||| ||||||||    
T  33691830 caattgtactttgtcaacgctctttgaagaacaagcatctaacgcctttaaattctttcaaa 33691769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 4821519 - 4821567
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatc 54  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||||||    
T  4821519 gtactttttcaacgctctttgaagaacaagcatccaatgccttcaaatc 4821567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 15704612 - 15704556
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||||||  ||||| ||||||||||||||||||||||||| ||||    
T  15704612 gtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaa 15704556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 16543133 - 16543077
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||  ||||||  |||||||||||||||||||||||||||| |||||||    
T  16543133 gtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaa 16543077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 16622529 - 16622585
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||  ||||||  |||||||||||||||||||||||||||| |||||||    
T  16622529 gtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaa 16622585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 19711126 - 19711070
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||| ||||||  ||| | ||||||||||||||||||||||||||||||    
T  19711126 gtactttgtcaatgctctttgaaggataagcatccaatgccttcaaatcctttcaaa 19711070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 12174454 - 12174397
Alignment:
Q  6 gtactttgtcaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||   || |||||||||||||||| ||||||||||||||||    
T  12174454 gtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaa 12174397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 16556751 - 16556695
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||| |||||||||||  |||||||||||  ||||||||| |||||||||||||    
T  16556751 gtactttttcaacgctctttgaagaacaagcaatcaatgccttaaaatcctttcaaa 16556695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 16608911 - 16608967
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||| |||||||||||  |||||||||||  ||||||||| |||||||||||||    
T  16608911 gtactttttcaacgctctttgaagaacaagcaatcaatgccttaaaatcctttcaaa 16608967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13260733 - 13260684
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttca 50  Q
    |||||||||| | |||| ||||||| ||||||||||||||||||| ||||    
T  13260733 caattgtactatctcaatgctcttccaagaacaagcatccaatgctttca 13260684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13894116 - 13894059
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||| |||| |||| ||| || ||||||||| ||| |||||||||||||||||||    
T  13894116 caattgtcctttttcaatgctttttaaagaacaaacattcaatgccttcaaatccttt 13894059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 16412046 - 16412078
Alignment:
Q  16 aacgctcttcaaagaacaagcatccaatgcctt 48  Q
    |||||||||||||||| ||||||||||||||||    
T  16412046 aacgctcttcaaagaataagcatccaatgcctt 16412078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 6e-27; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21910596 - 21910657
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21910596 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 21910657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7745790 - 7745729
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  7745790 caattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 7745729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21072337 - 21072276
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21072337 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 21072276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 13545606 - 13545547
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaag 63  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  13545606 ttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaag 13545547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17815008 - 17815067
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttca 60  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  17815008 caattgtactttgtcaacgctcttcaaagaacaagcatctaatgctttcaaatcctttca 17815067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23413071 - 23413010
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  23413071 caattgtactatgtcaacgctcttcaaaaaacaagcatccaatgctttcaaatcctttcaaa 23413010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33022704 - 33022765
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  33022704 caattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaa 33022765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6512525 - 6512467
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  6512525 caattgtactttgtcaacgctcttcaaagaacaag---ccaatgccttcaaatcctttcaaa 6512467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 642804 - 642754
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaa 51  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  642804 caattgtactttgtcaacgctcttcaaaaaacaagcatccaatgccttcaa 642754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19536398 - 19536337
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  19536398 caattgtactatgtcaacgctcttcaaagaacaaacatccaatgctttcaaatccattcaaa 19536337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20550935 - 20550995
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  20550935 caattgta-tttgtcaacgctctttaaagaacaagcatccaatgccttcaaatcttttcaaa 20550995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41566531 - 41566470
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||    
T  41566531 caattgtactatatcaacgctcttcaaagaataaacatccaatgccttcaaatcctttcaaa 41566470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 4887067 - 4887123
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  4887067 gtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcttttcaaa 4887123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 31117920 - 31117978
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||    
T  31117920 ttgtactttgtcaacactctttgaagaacaagcatccaatgccttcaaattctttcaaa 31117978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 89519 - 89458
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||| |||||||||||||||||||| |||||| ||||||| ||||||||    
T  89519 caattgtactatgtcaatgctcttcaaagaacaagcatgcaatgctttcaaattctttcaaa 89458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 11993933 - 11993989
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||||| ||||||    
T  11993933 gtactttgtcaacgctctttgaagaacaagcatccaatgctttcaaatcccttcaaa 11993989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21199100 - 21199048
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaat 53  Q
    ||||||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  21199100 caattgtactttgtcaacgctttccaaagaacgagcatccaatgccttcaaat 21199048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 30743025 - 30743081
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||||| || |||||||||||||||||||||||||||    
T  30743025 gtactttgtcaacgctctttgaagaataaacatccaatgccttcaaatcctttcaaa 30743081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6499279 - 6499329
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaa 51  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  6499279 caattgtactttgtcaacgctcttcaaaaagcaagcatccgatgccttcaa 6499329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23881107 - 23881157
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaa 51  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||    
T  23881107 caattgcactttgtcaacgctcttcaaaaagcaagcatccaatgccttcaa 23881157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26784394 - 26784455
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||| ||||||||| | | | ||||||||||||||    
T  26784394 caattgtactatgtcaacgctcttcaaagaataagcatccagttcttccaaatcctttcaaa 26784455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 32160814 - 32160867
Alignment:
Q  9 ctttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||  ||| | ||||||||||||||||||||||||||||||    
T  32160814 ctttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaa 32160867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 25096907 - 25096863
Alignment:
Q  14 tcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||    
T  25096907 tcaacgctctttaaagaacaagcatccaatgtcttcaaatccttt 25096863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 25154877 - 25154833
Alignment:
Q  14 tcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||    
T  25154877 tcaacgctctttaaagaacaagcatccaatgtcttcaaatccttt 25154833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12352892 - 12352845
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 48  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||    
T  12352892 caattgtactttgtcaacgctcttcaaaatgcaagcatccaatgcctt 12352845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9398831 - 9398781
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaa 51  Q
    |||||||||||||||||||||||||||| |  |||||| ||||||||||||    
T  9398831 caattgtactttgtcaacgctcttcaaaaagtaagcattcaatgccttcaa 9398781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21099801 - 21099752
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttca 50  Q
    |||||||||||||| |||| ||||||||   |||||||||||||||||||    
T  21099801 caattgtactttgtaaacgttcttcaaaaggcaagcatccaatgccttca 21099752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 15517014 - 15517070
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| || |||| |||||  ||||| ||||||||||||||||||||||||| ||||    
T  15517014 gtactatgccaacactctttgaagaataagcatccaatgccttcaaatccttccaaa 15517070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 26759206 - 26759250
Alignment:
Q  18 cgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||  ||||| ||||||||||||||||||||||||| ||||    
T  26759206 cgctctttgaagaataagcatccaatgccttcaaatccttccaaa 26759250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 26765555 - 26765599
Alignment:
Q  18 cgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||  ||||| ||||||||||||||||||||||||| ||||    
T  26765555 cgctctttgaagaataagcatccaatgccttcaaatccttccaaa 26765599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 29138498 - 29138442
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| || ||||||||||  ||||| ||||||||||||||||| ||||||| ||||    
T  29138498 gtactatgacaacgctctttgaagaataagcatccaatgccttctaatccttccaaa 29138442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 519 - 580
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  519 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6051 - 6108
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6051 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 6108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1734 - 1795
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1734 caattgtactttgtcaacgctcttcaaagtacaagcatccaatgccttcaaatcctttcaaa 1795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 1e-24; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20112805 - 20112744
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20112805 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 20112744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15987277 - 15987331
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15987277 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 15987331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15531729 - 15531668
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  15531729 caattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 15531668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18378358 - 18378419
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18378358 caattgtactttatcaacgctcttcaaagaacatgcatccaatgccttcaaatcctttcaaa 18378419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23284608 - 23284669
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  23284608 caattgtactttgtcaacgctcttcaaggaacaagcattcaatgccttcaaatcctttcaaa 23284669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24116872 - 24116933
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24116872 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 24116933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 14100544 - 14100484
Alignment:
Q  2 aattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  14100544 aattgtactttgtcaacgctctttaaagaagaagcatccaatgccttcaaatcctttcaaa 14100484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 18435603 - 18435661
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  18435603 ttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 18435661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15302244 - 15302305
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15302244 caattgtacaatgtcaacgctcttcaaagaacaagcatccaatgcctttaaatcctttcaaa 15302305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19688810 - 19688871
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  19688810 caattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaa 19688871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20730809 - 20730748
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  20730809 caattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaa 20730748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 20488018 - 20487962
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  20488018 gtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 20487962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9717887 - 9717948
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||| |||||||||||||    
T  9717887 caattgtactttgtcaacgctctttgaagaacaagcatcaaatgcctttaaatcctttcaaa 9717948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13435576 - 13435637
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  13435576 caattgtactttgtcaacgcttttcaaagaacaatcattcaatgctttcaaatcctttcaaa 13435637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26972333 - 26972272
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||| |||||||||||||    
T  26972333 caattgtactttgtcaacgctctttgaagaacaaacatccaatgcctttaaatcctttcaaa 26972272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21235169 - 21235229
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaa 61  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||    
T  21235169 caattgtactttgtcaacgctctttgaagaacaagcatcgaatgccttcaaatgctttcaa 21235229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19086202 - 19086253
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 52  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  19086202 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaa 19086253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26943620 - 26943675
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcct 56  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||    
T  26943620 caattgtacttcgccaacgctcttcaaagaacaagcatccaatgccttctaatcct 26943675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12715525 - 12715464
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||| | |||| |||||| |||||||| |||||||    
T  12715525 caattgtactttgtcaacgctcttcaaagaataggcatacaatgctttcaaatcatttcaaa 12715464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13602216 - 13602277
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||||||||| || |||||||    
T  13602216 caattgtattttgtcaacgttcttcaaagaataagcatccaatgccttcaattcatttcaaa 13602277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19470714 - 19470771
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||| |||| || ||||||| ||||||||||||||||||||||||||||||||||    
T  19470714 caattgtcctttttccacgctctgcaaagaacaagcatccaatgccttcaaatccttt 19470771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21625145 - 21625206
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||||||||    
T  21625145 caattgtactttgttaacgctctttgaagaacaagcatgcaatgccttcaaatgctttcaaa 21625206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22802185 - 22802246
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||| |||| ||||||||    
T  22802185 caattgtactttgttaacgctctttgaagaacaagcatccaatgcctttaaattctttcaaa 22802246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29918061 - 29918122
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||||||||  ||||||||||||| |||||||    
T  29918061 caattgtactttgtcaacgctctttgaagaacaagcatctgatgccttcaaatcttttcaaa 29918122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32544309 - 32544370
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||| || ||||||||||||| |||||||||||||    
T  32544309 caattgtactttgtcaacgctctttgaagaataaacatccaatgcctttaaatcctttcaaa 32544370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 10640510 - 10640466
Alignment:
Q  14 tcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  10640510 tcaacgctcttcaaagaacaagcatctaatgccttcaaatccttt 10640466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 15954752 - 15954808
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  || ||||||||| |||||||||||||||||||||||    
T  15954752 gtactttgtcaacgctctttgaataacaagcattcaatgccttcaaatcctttcaaa 15954808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16265255 - 16265195
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaa 61  Q
    |||||||||||| |||||||||||  ||||||||||||||||||| |||||| ||||||||    
T  16265255 caattgtactttctcaacgctctttgaagaacaagcatccaatgcattcaaaacctttcaa 16265195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25594112 - 25594155
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatg 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  25594112 caattgtactttgtcaacgcgcttcaaagaacaagcatccaatg 25594155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34451773 - 34451712
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||| ||||||||| | |||| |||||| |||||||||| |||||    
T  34451773 caattgtactttgtcaacgcttttcaaagaataggcatacaatgctttcaaatcctctcaaa 34451712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 21618293 - 21618349
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||||||  ||||| ||||||||||||||||||||||||| ||||    
T  21618293 gtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaa 21618349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 12349042 - 12349098
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||||||  ||||| ||||||||||||||||  ||||||||||||    
T  12349042 gtactatgtcaacgctctttgaagaataagcatccaatgcctttcaatcctttcaaa 12349098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 12423310 - 12423366
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||||||  ||||| |||||| |||||||||| ||||||||||||    
T  12423310 gtactatgtcaacgctctttgaagaataagcatacaatgccttccaatcctttcaaa 12423366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 19624038 - 19624082
Alignment:
Q  16 aacgctcttcaaagaacaagcatccaatgccttcaaatcctttca 60  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||    
T  19624038 aacgctctccaaagaacaatcatccaatgctttcaaatcctttca 19624082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16336171 - 16336232
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||| ||||| |||||||||||||  ||||| |||||| |||||||||| ||||||| ||||    
T  16336171 caatcgtactatgtcaacgctctttgaagaataagcattcaatgccttctaatccttccaaa 16336232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 19833109 - 19833076
Alignment:
Q  29 gaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||| ||||||||||||||||    
T  19833109 gaacaagcatccaatgcgttcaaatcctttcaaa 19833076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 16877262 - 16877314
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    |||||||||||||||||||  | |||  |||||||||| ||||||||||||||    
T  16877262 gtactttgtcaacgctctttgaggaattagcatccaattccttcaaatccttt 16877314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9140950 - 9141011
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9140950 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 9141011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12601139 - 12601200
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12601139 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 12601200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29680617 - 29680556
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29680617 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 29680556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37985685 - 37985624
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37985685 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 37985624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 26575549 - 26575453
Alignment:
Q  112 ctcttatcggttcatgtaacggcctcctcgctatctccaatggccaaatcgctttcacgcatcctaacgccgccaacgaaatcacaatctggaaccc 208  Q
    ||||||||||||||||||||||||||||||| || ||| | |||  ||| |||||||||||||| |||||| ||||||||||| |||||||||||||    
T  26575549 ctcttatcggttcatgtaacggcctcctcgccatgtcccacggcgtaatggctttcacgcatcccaacgcccccaacgaaatcgcaatctggaaccc 26575453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14604980 - 14604923
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14604980 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatccttt 14604923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16632478 - 16632539
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  16632478 caattgtactttgtcaacgctcttcaaagaacaagaatccaatgccttcaaatcttttcaaa 16632539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19884740 - 19884801
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  19884740 caattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 19884801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 55380328 - 55380389
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  55380328 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 55380389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3395628 - 3395689
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  3395628 caattgtactatgtcaacgctcttcaaagaactagcatccaatgctttcaaatcctttcaaa 3395689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3483759 - 3483820
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  3483759 caattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaa 3483820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6641722 - 6641779
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  6641722 caattgtactttgtcaacgctcttcaaagaacaagtatcaaatgccttcaaatccttt 6641779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14904429 - 14904368
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  14904429 caattgtactatgtcaacgctcttcaaagaataagcatccaatgtcttcaaatcctttcaaa 14904368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19621134 - 19621073
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  19621134 caattgtactatgtcaacgctcttcatagaacaagcatccaatgctttcaaatcctttcaaa 19621073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22675593 - 22675532
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||    
T  22675593 caattgtactttgtcaacgctctttgaagaacaagcatcaaatgccttcaaatcctttcaaa 22675532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 29121413 - 29121469
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  29121413 gtactttgtcaacgctctttaaagaacaagcatccagtgccttcaaatcctttcaaa 29121469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19666410 - 19666471
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||| |||||||||||||||| || |||||| ||||||||||||||||    
T  19666410 caattgtactttgtcaactctcttcaaagaacaagtattcaatgctttcaaatcctttcaaa 19666471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37435608 - 37435547
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||| ||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  37435608 caatagtactatgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 37435547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45833432 - 45833493
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||    
T  45833432 caattgtactttgtcaacgctcttaaaagaaaaagcatccaatgcattcaaatactttcaaa 45833493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 10692894 - 10692950
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  10692894 gtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 10692950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 10906660 - 10906716
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  10906660 gtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 10906716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 10072976 - 10073034
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||    
T  10072976 ttgtactttgtcaacgctctttgaataacaagcctccaatgccttcaaatcctttcaaa 10073034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 13576184 - 13576126
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||| |||||||||||||  ||||||||||||| ||||||||||||||||||||||    
T  13576184 ttgtactatgtcaacgctctttgaagaacaagcatctaatgccttcaaatcctttcaaa 13576126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 14833449 - 14833495
Alignment:
Q  16 aacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  14833449 aacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 14833495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 413040 - 413101
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||| |||||||||||||||||||  |||||||| ||| |||||||||||||||||||||||    
T  413040 caatcgtactttgtcaacgctctttgaagaacaaacattcaatgccttcaaatcctttcaaa 413101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 56034612 - 56034673
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||||||||  |||||||    
T  56034612 caattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaattatttcaaa 56034673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 54679973 - 54680029
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||| ||||||  |||||||| |||||||||||||||||||||||||||    
T  54679973 gtactttgtcaatgctctttgaagaacaaacatccaatgccttcaaatcctttcaaa 54680029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12811248 - 12811190
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| ||||||||||||||| ||   |||||||||||||||||||||||||||||||||||    
T  12811248 caattttactttgtcaacgctatt---agaacaagcatccaatgccttcaaatcctttcaaa 12811190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11915738 - 11915792
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 55  Q
    ||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||    
T  11915738 caattgtccttttccaacgctcttcaaagaataagcatccaatgccttcaaatcc 11915792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19911954 - 19911892
Alignment:
Q  1 caattgtactttgtcaacgctctt-caaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||| ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  19911954 caattatactatgtcaacgctctttcaaagaataagcatccaatgctttcaaatcctttcaaa 19911892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40846137 - 40846187
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaa 51  Q
    |||||||||||||||||||||||||||| | |||||||||||||| |||||    
T  40846137 caattgtactttgtcaacgctcttcaaaaagcaagcatccaatgctttcaa 40846187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 16853545 - 16853602
Alignment:
Q  5 tgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||  | ||||||||||||||||| ||||||||| ||||||    
T  16853545 tgtactttgtcaacgctctttgaggaacaagcatccaatgctttcaaatcccttcaaa 16853602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17247282 - 17247343
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||| | ||||  |||||||| ||| |||||||||||||||||||||||    
T  17247282 caattgtactttgtcaatgttctttgaagaacaaacattcaatgccttcaaatcctttcaaa 17247343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 8105680 - 8105737
Alignment:
Q  6 gtactttgtcaacgctcttcaaag-aacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||   || |||||||||||||||| ||||||||||||||||    
T  8105680 gtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaa 8105737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 25651165 - 25651116
Alignment:
Q  13 gtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||  ||||| |||||| |||||||||||||||||| ||||    
T  25651165 gtcaacgctctttgaagaataagcattcaatgccttcaaatccttccaaa 25651116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 33378444 - 33378488
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 48  Q
    ||||||||||||||| |||||  ||| ||||||||||||||||||    
T  33378444 ttgtactttgtcaactctctttgaaggacaagcatccaatgcctt 33378488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 1e-24; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19717567 - 19717628
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19717567 caattgtactttgtcaacgctcttcaaagaacaagcatccgatgccttcaaatcctttcaaa 19717628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22201773 - 22201712
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22201773 caattgtactttgtcaacgctcttcatagaacaagcatccaatgccttcaaatcctttcaaa 22201712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28492441 - 28492380
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28492441 caattgtactttgtcaacgctattcaaagaacaagcatccaatgccttcaaatcctttcaaa 28492380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12284466 - 12284527
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12284466 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 12284527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21191902 - 21191845
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21191902 caattgtactttgccaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 21191845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22153900 - 22153961
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  22153900 caattgtactttgtcaacgctcttcaaagaacaatcatccaatgctttcaaatcctttcaaa 22153961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22600219 - 22600158
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  22600219 caattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 22600158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32785974 - 32785913
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  32785974 caattgtactttgtcaacgctcttttaagaacaagcatccaatgccttcaaatcctttcaaa 32785913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33256388 - 33256331
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33256388 caattgtactttgtcaacgcccttcaaagaacaagcatccaatgccttcaaatccttt 33256331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33276560 - 33276503
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33276560 caattgtactttgtcaacgcccttcaaagaacaagcatccaatgccttcaaatccttt 33276503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35401852 - 35401913
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  35401852 caattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 35401913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48704247 - 48704308
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  48704247 caattgtactttgtcaacgttcttcaaagaacaagcatccagtgccttcaaatcctttcaaa 48704308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10757464 - 10757525
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  10757464 caattgtactttgtcaatgctcttcaaagaacaatcatccaatgctttcaaatcctttcaaa 10757525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20954510 - 20954449
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  20954510 caattgtactttgtcaacgctcttcaaagaataagcctccaatgctttcaaatcctttcaaa 20954449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22427394 - 22427333
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  22427394 caattgtactttgtcaacgcttttttaagaacaagcatccaatgccttcaaatcctttcaaa 22427333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39201029 - 39200968
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  39201029 caattgtactttgtcaacgctctttgaagaacaagcatccaatgtcttcaaatcctttcaaa 39200968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 22464843 - 22464785
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  22464843 ttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcatttcaaa 22464785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1577910 - 1577971
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  1577910 caattatactttgtcaacgctcttaaaagaacaagcatccaatgctttcaaattctttcaaa 1577971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2834733 - 2834794
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||| |||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||    
T  2834733 caatcgtactttgtcaacgttctttgaagaacaagcatccaatgccttcaaatcctttcaaa 2834794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29215840 - 29215901
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||| | |||||||  ||||||||||||||||||||||||||||||||||||    
T  29215840 caattgtactttgttatcgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 29215901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36134233 - 36134293
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  36134233 caattgtactttgtcaacgctctttgaagaacaagcatccaatg-cttcaaatcctttcaaa 36134293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38282609 - 38282670
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||| |||||||||||||    
T  38282609 caattgtactttgtcaacgctctttgaagaacaagcattcaatgcctttaaatcctttcaaa 38282670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 25448598 - 25448542
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  25448598 gtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaa 25448542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 1900392 - 1900449
Alignment:
Q  5 tgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||  |||||||||||| ||||||||| |||||||||||||    
T  1900392 tgtactttgtcaacgctctttgaagaacaagcattcaatgcctttaaatcctttcaaa 1900449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2268574 - 2268635
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  | |||||||||| ||||||||||||||| |||||||    
T  2268574 caattgtactttgtcaacgctctttgacgaacaagcattcaatgccttcaaatcatttcaaa 2268635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12613851 - 12613798
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatc 54  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  12613851 caattgtactttgccaacgctcttcaaagaacaagcaaccaatgctttcaaatc 12613798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16235333 - 16235272
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||| |||||   ||||||||||| |||||||||||||||||||||||    
T  16235333 caattgtactttgtcaacactctttggagaacaagcattcaatgccttcaaatcctttcaaa 16235272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17025001 - 17024944
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    |||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  17025001 caattgtcatttttcaacgctctttaaagaacaagcatccaatgccttcaaatccttt 17024944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 35040214 - 35040270
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  |||| |||||||||||||| ||||||||||||||||    
T  35040214 gtactttgtcaacgctctttgaagatcaagcatccaatgctttcaaatcctttcaaa 35040270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21028836 - 21028886
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaa 51  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  21028836 caattgtactttgtcagcgctcttcaaaaagcaagcatccaatgccttcaa 21028886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2267132 - 2267193
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||| |||||| ||||||||||  |||||||| |||||||||||||||||| ||||||||    
T  2267132 caattgcactttgacaacgctctttgaagaacaaacatccaatgccttcaaattctttcaaa 2267193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23036564 - 23036503
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||| ||||||  ||||||||  |||||||||||||||||| |||||||||||||||||    
T  23036564 caattgttctttgttgacgctctttgaagaacaagcatccaatgtcttcaaatcctttcaaa 23036503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30893135 - 30893196
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||| |||| ||||||||||||||||| | ||| ||||||||||||||||    
T  30893135 caattgtactatgtcagcgctattcaaagaacaagcatctagtgctttcaaatcctttcaaa 30893196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 14263480 - 14263427
Alignment:
Q  9 ctttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| ||||||||||  | ||||||| ||||||||||||||||||||||||||    
T  14263480 ctttgccaacgctctttgaggaacaagtatccaatgccttcaaatcctttcaaa 14263427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 7745122 - 7745066
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||| | ||||||| ||||| ||||||||||||||||    
T  7745122 gtactttgtcaacgctctttgaaggataagcatcaaatgcattcaaatcctttcaaa 7745066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26702166 - 26702116
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaa 51  Q
    |||||||||||||||| | ||||||||| | |||| |||||||||||||||    
T  26702166 caattgtactttgtcatcactcttcaaaaagcaagaatccaatgccttcaa 26702116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30572240 - 30572301
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||| ||||| |||||||||||||| ||||| || |||||||||| ||  ||||||||||||    
T  30572240 caatcgtactatgtcaacgctcttctaagaataaacatccaatgcttttcaatcctttcaaa 30572301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 48570263 - 48570207
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||||||  ||||| ||||||||||||||||  ||||||| ||||    
T  48570263 gtactatgtcaacgctctttgaagaataagcatccaatgccttttaatccttccaaa 48570207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 14693 - 14753
Alignment:
Q  2 aattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14693 aattgtactttgtcaacgctcttcaaagtacaagcatccaatgccttcaaatcctttcaaa 14753  T

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Target: scaffold0290 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 18687 - 18627
Alignment:
Q  2 aattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18687 aattgtactttgtcaacgctcttcaaagaacaagtatccaatgccttcaaatcctttcaaa 18627  T

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Target: scaffold0004 (Bit Score: 57; Significance: 5e-24; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 377626 - 377566
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaa 61  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  377626 caattgtactttgtcaatgctcttcaaagaacaagcatccaatgccttcaaatcctttcaa 377566  T

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Target: scaffold0004; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 244351 - 244294
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  244351 caattgtcctttttcaacgctcttcaaagaacaagcatccaatgtcttcaaatccttt 244294  T

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Target: scaffold0004; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 220282 - 220326
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 45  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  220282 caattgtactttgtcaacgctcttcaaataacaagcatccaatgc 220326  T

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Target: scaffold0426 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13615 - 13676
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13615 caattgtactatgtcaacgctcttcaaagaacaaacatccaatgccttcaaatcctttcaaa 13676  T

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Target: scaffold0359 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5757 - 5696
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  5757 caattgtactttgtcaacgctcttaaaagaacaagcatccaatgccttcatatcctttcaaa 5696  T

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Target: scaffold0161 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10175 - 10114
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  10175 caattgtactttgtcaacgctctttaaaaaacaagcatccaatgccttcaaatcctttcaaa 10114  T

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Target: scaffold0083 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26042 - 25981
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26042 caattgtactatgtcaaccctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 25981  T

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Target: scaffold0083; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44771 - 44710
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44771 caattgtattatgtcaacgctcttcaaagaacaagcatctaatgccttcaaatcctttcaaa 44710  T

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Target: scaffold0026 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 60060 - 60121
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  60060 caattgtactatgtcaacgctcttcaaagaacaagcatccaatggcttcaaatcctttcaaa 60121  T

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Target: scaffold0026; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7970 - 8031
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  7970 caattgtactatgtcaacgctcttcaaagaacaagcatccaatgaattcaaatcctttcaaa 8031  T

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Target: scaffold0005 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 212398 - 212455
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  212398 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatccttt 212455  T

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Target: scaffold0005; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 6250 - 6204
Alignment:
Q  16 aacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  6250 aacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 6204  T

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Target: scaffold0193 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 15841 - 15899
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15841 ttgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaagtcctttcaaa 15899  T

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Target: scaffold0861 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5014 - 4953
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  5014 caattgtactttgtcaacgctctataaagaacaaacatccaatgccttcaaatcctttcaaa 4953  T

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Target: scaffold0411 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12253 - 12314
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  12253 caattgtactttgtcaacgctcttcaaagaataagcatccaatgctttcaaattctttcaaa 12314  T

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Target: scaffold0210 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1704 - 1765
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  1704 caattgtactttgtcaacgctcttcaaagagtaagcatccaatgctttcaaatcctttcaaa 1765  T

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Target: scaffold0146 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15161 - 15222
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||    
T  15161 caattgtactttgtcaacgctattcaaagaacaatcatccaatgctttcaaatcctttcaaa 15222  T

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Target: scaffold0120 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36842 - 36781
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  36842 caattgttctttgtcaacactctttaaagaacaagcatccaatgccttcaaatcctttcaaa 36781  T

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Target: scaffold0120; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42163 - 42224
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  42163 caattgttctttgtcaacactctttaaagaacaagcatccaatgccttcaaatcctttcaaa 42224  T

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Target: scaffold1359 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 717 - 661
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  717 gtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10000 - 10052
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaat 53  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10000 caattgtactttgtcaacgctcttcaaagaacaagcatcgaatgccttcaaat 10052  T

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Target: scaffold0047 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9947 - 9999
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaat 53  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9947 caattgtactttgtcaacgctcttcaaagaacaagcatctaatgccttcaaat 9999  T

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Target: scaffold0047; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 30283 - 30329
Alignment:
Q  16 aacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  30283 aacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaa 30329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 78428 - 78372
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  78428 gtactttgtcaacgctctttaaagaataagcatccaatgccttcaaatcctttcaaa 78372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 215559 - 215503
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  215559 gtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 215503  T

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Target: scaffold0003 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 90119 - 90061
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  90119 ttgtattttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaa 90061  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 758 - 790
Alignment:
Q  16 aacgctcttcaaagaacaagcatccaatgcctt 48  Q
    |||||||||||||||| ||||||||||||||||    
T  758 aacgctcttcaaagaataagcatccaatgcctt 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10013 - 10074
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||| |||||||||||||||  ||||||||||||| ||||||||||||||||    
T  10013 caattgtactttgtgaacgctcttcaaagagtaagcatccaatgctttcaaatcctttcaaa 10074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9839 - 9900
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  9839 caattgtactatgtcaacgctcttcaaagcacaagcatccaatgctttcaagtcctttcaaa 9900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22720 - 22781
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||| |||||  ||||| ||||||||||||||||||||||||||||||    
T  22720 caattgtactttgtcaacactctttgaagaataagcatccaatgccttcaaatcctttcaaa 22781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19539 - 19478
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||| | |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  19539 caattgtattatgtcaacgctcttcaaagaacaagcatccaatgcttttaaatcctttcaaa 19478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21038 - 20977
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||| ||| ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  21038 caattgtacttggtcgacgctctttgaagaataagcatccaatgccttcaaatcctttcaaa 20977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 5665 - 5608
Alignment:
Q  5 tgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  5665 tgtactttgtcaacgctctttgaagaataagcatcaaatgccttcaaatcctttcaaa 5608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 103616 - 103677
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| | ||| |||||||    
T  103616 caattgtactttgtcaacgctctttgaagaacaagcatccaatgccttaatatcatttcaaa 103677  T

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Target: scaffold1434 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 832 - 792
Alignment:
Q  22 cttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  832 cttcaaagaacaagcatccaatgccttcaaatcctttcaaa 792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 1761 - 1705
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  |||||||| |||||| ||||||||||||||||||||    
T  1761 gtactttgtcaacgctctttgaagaacaatcatccagtgccttcaaatcctttcaaa 1705  T

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Target: scaffold0439 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 6802 - 6746
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||| |||||||    
T  6802 gtactttgtcaatgctctttgaagaacaagcatccaatgccttcaaatcttttcaaa 6746  T

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Target: scaffold0220 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 1859 - 1803
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||| | ||||||||||||||||||||||||||||||    
T  1859 gtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaa 1803  T

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Target: scaffold0132 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 38147 - 38091
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||| | ||||||||||||||||||||||||||||||    
T  38147 gtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaa 38091  T

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Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 159099 - 159151
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaat 53  Q
    ||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  159099 caattgtcctttgtcaacgctcttcaaagaacaagcatataatgccttcaaat 159151  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 39488 - 39530
Alignment:
Q  20 ctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||    
T  39488 ctctttaaagaacatgcatctaatgccttcaaatcctttcaaa 39530  T

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Target: scaffold0022; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 137548 - 137590
Alignment:
Q  20 ctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||    
T  137548 ctctttaaagaacatgcatctaatgccttcaaatcctttcaaa 137590  T

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Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 165008 - 164952
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||||||||||  ||| | ||||||||||||||||||||||||||||||    
T  165008 gtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaa 164952  T

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Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27496 - 27435
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||| |||||||||||||||||||  |||| |||||||||||||||||| |||||| |||||    
T  27496 caatggtactttgtcaacgctctttgaagagcaagcatccaatgccttcgaatcctatcaaa 27435  T

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Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 74625 - 74682
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||||||||||||| ||| |||||||| |||||||| ||| ||||||||||||||    
T  74625 caattgtactttgtcaatgcttttcaaagagcaagcatctaattccttcaaatccttt 74682  T

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Target: scaffold0530 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 2062 - 2027
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagc 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  2062 caattgtactttgtcaacgctcttcaaagaacaagc 2027  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 143135 - 143193
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||  ||||||||||  |||||||||||||||||||||| |||||||| ||||    
T  143135 ttgtacttttccaacgctctttgaagaacaagcatccaatgcctttaaatccttccaaa 143193  T

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Target: scaffold0251 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7747 - 7808
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||||||||||||||||||||||  ||||| || ||| ||||||||| |||||||| ||||    
T  7747 caattgtactttgtcaacgctctttgaagaataaacatacaatgcctttaaatccttccaaa 7808  T

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Target: scaffold0064 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 43978 - 43933
Alignment:
Q  9 ctttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatc 54  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||    
T  43978 ctttttcaacgctcttcaaggaacaggcatccaatgccttcaaatc 43933  T

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Target: scaffold0211 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 15684 - 15628
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||| ||||||  ||  | ||||||||||||||||||||||||||||||    
T  15684 gtactttgtcaatgctctttgaaagataagcatccaatgccttcaaatcctttcaaa 15628  T

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Target: scaffold0176 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 9204 - 9260
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||||||  ||||| ||||||||||||||||| ||||||| ||||    
T  9204 gtactatgtcaacgctctttgaagaataagcatccaatgccttctaatccttccaaa 9260  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 60852 - 60908
Alignment:
Q  6 gtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    ||||| |||||||||||||  |||||||||||| |||||||||| ||||||| ||||    
T  60852 gtactatgtcaacgctctttgaagaacaagcattcaatgccttccaatccttccaaa 60908  T

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Target: scaffold0217 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 19078 - 19136
Alignment:
Q  4 ttgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||  ||||||||||  ||||||||||||| |||||||| |||||||| ||||    
T  19078 ttgtacttttccaacgctctttgaagaacaagcatcaaatgcctttaaatccttccaaa 19136  T

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Target: scaffold1747 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1361 - 1410
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttca 50  Q
    |||||||| ||| ||||||||||||||| || ||||||| ||||||||||    
T  1361 caattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttca 1410  T

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Target: scaffold1745 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 50 - 1
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttca 50  Q
    |||||||| ||| ||||||||||||||| || ||||||| ||||||||||    
T  50 caattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttca 1  T

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Target: scaffold0081 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40681 - 40738
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||| |||| ||||||||||||||||||| | ||||  |||||||||||| ||||    
T  40681 caattgttctttttcaacgctcttcaaagaaccaccatcatatgccttcaaattcttt 40738  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1588 - 1531
Alignment:
Q  1 caattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttt 58  Q
    ||||||| ||||  ||||| ||||||||||| || | |||||||||||||||||||||    
T  1588 caattgtccttttccaacgttcttcaaagaataaacgtccaatgccttcaaatccttt 1531  T

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Target: scaffold0471 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 3361 - 3409
Alignment:
Q  14 tcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaa 62  Q
    |||||||||||  ||||| || |||||||||||||||||||||| ||||    
T  3361 tcaacgctctttgaagaataaacatccaatgccttcaaatccttccaaa 3409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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