View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8172_low_24 (Length: 358)

Name: NF8172_low_24
Description: NF8172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8172_low_24
NF8172_low_24
[»] chr4 (26 HSPs)
chr4 (1-349)||(54392594-54392943)
chr4 (1-107)||(55414438-55414545)
chr4 (2-108)||(17884014-17884121)
chr4 (26-107)||(50681107-50681188)
chr4 (1-108)||(3155548-3155656)
chr4 (3-108)||(51630058-51630164)
chr4 (10-108)||(28300316-28300415)
chr4 (31-106)||(35571650-35571725)
chr4 (1-99)||(56480293-56480392)
chr4 (26-100)||(17822890-17822964)
chr4 (26-99)||(9760411-9760484)
chr4 (1-108)||(40174510-40174616)
chr4 (25-73)||(21523529-21523577)
chr4 (5-108)||(54069434-54069538)
chr4 (29-100)||(437269-437340)
chr4 (1-83)||(3070015-3070098)
chr4 (31-107)||(55064809-55064887)
chr4 (2-107)||(29388560-29388666)
chr4 (49-107)||(50662756-50662814)
chr4 (26-107)||(53294132-53294213)
chr4 (1-108)||(6364094-6364202)
chr4 (39-107)||(21731674-21731742)
chr4 (26-86)||(27043869-27043929)
chr4 (4-107)||(29912897-29913000)
chr4 (1-53)||(41336706-41336758)
chr4 (14-81)||(52746884-52746952)
[»] chr1 (44 HSPs)
chr1 (1-107)||(24915069-24915176)
chr1 (1-108)||(7472257-7472364)
chr1 (26-103)||(17603406-17603483)
chr1 (5-108)||(4445657-4445761)
chr1 (1-112)||(37842368-37842480)
chr1 (1-107)||(47432041-47432147)
chr1 (33-107)||(3234033-3234107)
chr1 (1-107)||(27820355-27820461)
chr1 (26-107)||(473135-473216)
chr1 (3-107)||(1510328-1510432)
chr1 (28-108)||(2294884-2294964)
chr1 (37-108)||(2777874-2777945)
chr1 (26-108)||(17778929-17779010)
chr1 (26-108)||(34290207-34290289)
chr1 (1-66)||(38578472-38578538)
chr1 (2-73)||(30191937-30192010)
chr1 (26-107)||(37631577-37631658)
chr1 (30-107)||(41195211-41195288)
chr1 (5-108)||(42174806-42174908)
chr1 (30-86)||(27976570-27976626)
chr1 (1-83)||(6265039-6265122)
chr1 (3-45)||(15687153-15687196)
chr1 (1-99)||(37517220-37517319)
chr1 (1-108)||(38882929-38883035)
chr1 (6-73)||(46423329-46423395)
chr1 (26-108)||(7218091-7218173)
chr1 (7-100)||(9656601-9656695)
chr1 (3-108)||(29793729-29793835)
chr1 (26-112)||(34952186-34952272)
chr1 (42-108)||(45975677-45975743)
chr1 (26-86)||(3069973-3070034)
chr1 (54-107)||(7137016-7137069)
chr1 (1-57)||(13809943-13810000)
chr1 (26-107)||(14576672-14576752)
chr1 (1-45)||(26293186-26293231)
chr1 (6-86)||(26630413-26630494)
chr1 (4-108)||(31517757-31517862)
chr1 (1-57)||(34619446-34619503)
chr1 (29-86)||(41505660-41505717)
chr1 (26-107)||(51695513-51695593)
chr1 (3-113)||(1509977-1510088)
chr1 (3-42)||(4549813-4549853)
chr1 (4-67)||(9572166-9572230)
chr1 (1-45)||(28389153-28389197)
[»] chr2 (26 HSPs)
chr2 (1-107)||(12464491-12464598)
chr2 (1-112)||(4026762-4026874)
chr2 (1-107)||(43279547-43279652)
chr2 (26-107)||(18066099-18066180)
chr2 (27-100)||(41851507-41851580)
chr2 (1-108)||(42457893-42458001)
chr2 (1-107)||(41241150-41241257)
chr2 (30-107)||(33319830-33319907)
chr2 (1-99)||(41407246-41407346)
chr2 (52-107)||(26202025-26202080)
chr2 (26-105)||(39073709-39073788)
chr2 (1-107)||(45229457-45229563)
chr2 (26-108)||(1625871-1625953)
chr2 (30-108)||(26626848-26626926)
chr2 (2-107)||(29316793-29316899)
chr2 (1-109)||(656793-656902)
chr2 (35-108)||(680483-680556)
chr2 (26-107)||(10490600-10490681)
chr2 (1-45)||(29633017-29633062)
chr2 (1-73)||(39567848-39567921)
chr2 (1-45)||(40837508-40837553)
chr2 (1-45)||(42907304-42907349)
chr2 (1-100)||(3611171-3611271)
chr2 (3-46)||(19629246-19629290)
chr2 (3-46)||(19826147-19826191)
chr2 (1-45)||(29430701-29430745)
[»] chr8 (17 HSPs)
chr8 (6-108)||(37353266-37353368)
chr8 (1-107)||(26771210-26771317)
chr8 (1-108)||(18930647-18930755)
chr8 (31-107)||(27028807-27028883)
chr8 (1-108)||(10114435-10114542)
chr8 (26-100)||(38602304-38602378)
chr8 (7-108)||(27049319-27049419)
chr8 (7-73)||(16733980-16734047)
chr8 (1-66)||(4558743-4558809)
chr8 (5-86)||(42043384-42043466)
chr8 (59-108)||(11569474-11569523)
chr8 (1-45)||(13561392-13561437)
chr8 (26-107)||(18133627-18133708)
chr8 (1-45)||(37444495-37444540)
chr8 (1-45)||(42597346-42597391)
chr8 (6-57)||(10758324-10758376)
chr8 (1-64)||(12497292-12497356)
[»] chr6 (19 HSPs)
chr6 (1-105)||(6909892-6909998)
chr6 (1-99)||(31624203-31624302)
chr6 (1-108)||(9093573-9093681)
chr6 (22-107)||(34430479-34430564)
chr6 (2-107)||(35098981-35099089)
chr6 (1-100)||(2735014-2735114)
chr6 (53-108)||(31624088-31624143)
chr6 (37-107)||(6536597-6536667)
chr6 (20-86)||(11784069-11784135)
chr6 (1-89)||(24626240-24626329)
chr6 (50-108)||(835266-835324)
chr6 (30-108)||(836558-836636)
chr6 (28-105)||(6538485-6538562)
chr6 (1-85)||(6654560-6654645)
chr6 (1-77)||(29274277-29274354)
chr6 (1-84)||(8147647-8147731)
chr6 (6-86)||(12836376-12836456)
chr6 (26-106)||(20368199-20368279)
chr6 (1-108)||(27893992-27894099)
[»] chr3 (34 HSPs)
chr3 (1-99)||(36189511-36189610)
chr3 (1-86)||(30956665-30956751)
chr3 (1-86)||(30972477-30972563)
chr3 (27-107)||(39980701-39980781)
chr3 (1-100)||(20880422-20880521)
chr3 (8-99)||(46886718-46886808)
chr3 (3-108)||(36783351-36783457)
chr3 (26-107)||(30443864-30443945)
chr3 (5-85)||(35127411-35127492)
chr3 (34-107)||(47132310-47132383)
chr3 (1-108)||(39602227-39602334)
chr3 (1-100)||(44061048-44061148)
chr3 (1-108)||(402559-402666)
chr3 (1-107)||(35959474-35959581)
chr3 (2-100)||(36631076-36631175)
chr3 (26-108)||(21367638-21367720)
chr3 (1-45)||(2128331-2128376)
chr3 (1-45)||(15304427-15304472)
chr3 (26-107)||(20170494-20170575)
chr3 (33-97)||(49034291-49034355)
chr3 (1-107)||(3845580-3845687)
chr3 (1-107)||(52618948-52619055)
chr3 (3-100)||(2719416-2719513)
chr3 (26-100)||(14145883-14145957)
chr3 (1-46)||(42808924-42808970)
chr3 (1-45)||(10101556-10101601)
chr3 (1-45)||(10212481-10212526)
chr3 (26-67)||(20257506-20257547)
chr3 (1-81)||(32095235-32095316)
chr3 (1-45)||(42809246-42809291)
chr3 (1-85)||(50952279-50952363)
chr3 (1-100)||(16073068-16073168)
chr3 (6-81)||(25447288-25447364)
chr3 (3-46)||(45535361-45535405)
[»] chr5 (31 HSPs)
chr5 (26-108)||(12425542-12425624)
chr5 (1-108)||(4014441-4014549)
chr5 (1-100)||(39105409-39105509)
chr5 (1-46)||(43215324-43215369)
chr5 (1-100)||(9202773-9202873)
chr5 (26-86)||(32372595-32372655)
chr5 (25-73)||(32859770-32859818)
chr5 (25-73)||(32861942-32861990)
chr5 (25-73)||(32862726-32862774)
chr5 (1-108)||(39594753-39594860)
chr5 (1-107)||(29925786-29925893)
chr5 (1-99)||(16458005-16458103)
chr5 (26-107)||(16937901-16937982)
chr5 (2-107)||(25461038-25461143)
chr5 (1-86)||(34736566-34736651)
chr5 (1-73)||(1619037-1619108)
chr5 (2-45)||(10363696-10363740)
chr5 (39-107)||(23994734-23994802)
chr5 (1-47)||(465899-465946)
chr5 (3-113)||(25461328-25461438)
chr5 (1-104)||(25461668-25461771)
chr5 (39-108)||(7984952-7985022)
chr5 (1-100)||(7319033-7319136)
chr5 (1-45)||(10771961-10772003)
chr5 (1-45)||(42583094-42583139)
chr5 (4-43)||(4855646-4855686)
chr5 (8-107)||(6593252-6593351)
chr5 (1-44)||(7853603-7853647)
chr5 (1-100)||(10639898-10639998)
chr5 (1-45)||(12460081-12460125)
chr5 (1-37)||(14714928-14714964)
[»] chr7 (30 HSPs)
chr7 (1-108)||(33678725-33678833)
chr7 (28-107)||(46280290-46280369)
chr7 (26-108)||(44821930-44822012)
chr7 (4-107)||(37064482-37064586)
chr7 (4-107)||(39279910-39280014)
chr7 (1-107)||(420305-420412)
chr7 (40-107)||(43648225-43648292)
chr7 (30-100)||(40252132-40252202)
chr7 (1-46)||(43152981-43153027)
chr7 (26-107)||(17944361-17944442)
chr7 (30-107)||(20269551-20269628)
chr7 (28-100)||(43694595-43694667)
chr7 (1-100)||(47177581-47177681)
chr7 (26-101)||(15309589-15309664)
chr7 (7-73)||(34083577-34083644)
chr7 (1-83)||(39279708-39279791)
chr7 (26-113)||(39907774-39907861)
chr7 (62-109)||(47130801-47130848)
chr7 (26-100)||(20526417-20526491)
chr7 (2-73)||(48507667-48507740)
chr7 (1-46)||(49060485-49060531)
chr7 (1-99)||(4970819-4970913)
chr7 (1-45)||(6824863-6824908)
chr7 (7-108)||(22283761-22283862)
chr7 (26-67)||(45264066-45264107)
chr7 (1-108)||(2767195-2767303)
chr7 (2-100)||(17248499-17248598)
chr7 (2-105)||(19022605-19022709)
chr7 (5-100)||(40689011-40689107)
chr7 (60-100)||(44989703-44989743)
[»] scaffold0018 (1 HSPs)
scaffold0018 (26-108)||(178342-178424)


Alignment Details
Target: chr4 (Bit Score: 306; Significance: 1e-172; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 54392943 - 54392594
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54392943 ataagctatttctataataaaaaataaataaagttaaattgtttttgtatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 54392844  T
Q  101 ttgaaaactgctattatgagtattgcgaatgcaagggattgatcgagctatttctaggtttgtgttgttgaaaacccaactgtttcaaatcagttcacaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54392843 ttgaaaactgctattatgagtattgcgaatgcaagggattgatcgagctatttctaggtttgtgttgttgaaaacccaactgtttcaaatcagttcacaa 54392744  T
Q  201 tatattcagcattacacttcttttccattgacctttgagcacatattacttataacatgacacaattgcataggctta-nnnnnnnncaccctctttccc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||| ||    
T  54392743 tatattcagcattacacttcttttccattgacctttgagcacatattacttataacatgacacaattgcataggcttatttttttttcaccctctttgcc 54392644  T
Q  300 ctgtaggtaatagtatccgcagaggcagatcctcctgttgttagaataat 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54392643 ctgtaggtaatagtatccgcagaggcagatcctcctgttgttagaataat 54392594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 55414545 - 55414438
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||   |||| ||||| ||||||||| || |||||||||||||||| |  |||||| ||||| |||||||||||| || |||||||||    
T  55414545 ataagctatttctattggaaaagataaaataaagttaatttttttttgcatatgctataaattgttttcataagttatcttggagaacttatgaaaataa 55414446  T
Q  100 gttgaaaa 107  Q
    ||||||||    
T  55414445 gttgaaaa 55414438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 17884014 - 17884121
Alignment:
Q  2 taagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||| || |||||| ||||| ||| |||||||  || ||||||| ||    
T  17884014 taagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattag 17884113  T
Q  101 ttgaaaac 108  Q
     |||||||    
T  17884114 ctgaaaac 17884121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 50681188 - 50681107
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||||| ||||||||||||||| ||||||||| || |||||  ||||| ||| ||||||||||| ||||||||| |||||||    
T  50681188 aaataatgttaaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataaattgaaaa 50681107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3155548 - 3155656
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||| | | ||||  ||||||||| ||||  ||||||| |||| |  |||||||||    
T  3155548 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaagaactaatgaaaataa 3155647  T
Q  100 gttgaaaac 108  Q
    | |||||||    
T  3155648 gctgaaaac 3155656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 51630058 - 51630164
Alignment:
Q  3 aagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagt 101  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||||   ||| ||||| |||| |||| ||||| ||||||| |||| || ||||||||||     
T  51630058 aagctatttatatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagc 51630157  T
Q  102 tgaaaac 108  Q
    |||||||    
T  51630158 tgaaaac 51630164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 28300415 - 28300316
Alignment:
Q  10 ttctataa-caaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    |||||||| |||| || |||||||||||||||||||||| ||| ||||| | || |||| ||| | ||||||| |||  || ||||||||||||||||||    
T  28300415 ttctataatcaaagaaaaaataaagttaaattgtttttgtataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaaaac 28300316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 35571725 - 35571650
Alignment:
Q  31 aagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaa 106  Q
    |||||| |||||||| | ||| ||||| ||||||||| ||||| |||||| ||||| || ||||||||||||||||    
T  35571725 aagttatattgttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaaa 35571650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 56480293 - 56480392
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||| ||||||||| | ||| |||||||||||||||| || ||| | ||| ||||||||| ||||  |||||||||||  || |||||||||    
T  56480293 ataagctatttccataacaaaagacaaaataaagttaaattgtttatgtataagttataagctgttttcataaactatcttggagagcttatgaaaataa 56480392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 17822964 - 17822890
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||| ||||||||||||| ||  ||||||||| || |||||| ||||| |||||||||||| || ||||||||||    
T  17822964 aaattaagttaaattgttattttatatgctataagttgttttcataagctatcttggagaacttatgaaaataag 17822890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 9760411 - 9760484
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||||||| |||||  ||||||||| || |||||| ||||| ||| |||||||| || |||||||||    
T  9760411 aaataaagttaaattcttttttaatatgctataagttgtttttataagctatattggagaacttatgaaaataa 9760484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 40174510 - 40174616
Alignment:
Q  1 ataagctatttctataacaaaaaataaat-aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||  ||| |||||||||||| ||||||||||||||||   | | ||||| ||||||||| ||||| ||  |||||||| || ||| |||||    
T  40174510 ataagctattt--atagcaaaaaataaattaaagttaaattgttttcataaaagctataagctgttttcataagctacattggagaacttgtgataataa 40174607  T
Q  100 gttgaaaac 108  Q
    |||||||||    
T  40174608 gttgaaaac 40174616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 21523529 - 21523577
Alignment:
Q  25 taaataaagttaaattgtttttgcatatgctattagctgttttaataag 73  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||||||||    
T  21523529 taaataaagataaattgtttttgaatatactataagctgttttaataag 21523577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 54069538 - 54069434
Alignment:
Q  5 gctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttg 103  Q
    ||||||| |||| ||||| ||||| ||| ||||||||||||||| ||||||||| |  |||||| ||||| ||| ||| ||||  | ||||||||||||     
T  54069538 gctatttttatatcaaaagataaaataatgttaaattgtttttgtatatgctataatttgtttttataagttatattgaagaacatatgaaaataagtta 54069439  T
Q  104 aaaac 108  Q
    |||||    
T  54069438 aaaac 54069434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 437340 - 437269
Alignment:
Q  29 taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||||||||| ||||||||| || ||| ||||||||| ||||  ||| |||||||| || ||||||||||    
T  437340 taaagttaaattatttttgcatgtgttatgagctgtttttataaactatattggagaatttatgaaaataag 437269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3070098 - 3070015
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttgga 83  Q
    ||||| ||||| ||||||||| ||| |||||||||||| ||||||| | | ||||||  ||||||||| ||||| |||||||||    
T  3070098 ataagttatttttataacaaataatcaaataaagttaacttgttttggtacatgctacaagctgttttcataagttatcttgga 3070015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 55064809 - 55064887
Alignment:
Q  31 aagttaaattgtttttgcatatgctattagctgttttaataa--gatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||||||||||||||||  ||||||||  |||||||| ||||  | |||||||||||| || |||||||||| ||||||    
T  55064809 aagttaaattgtttttgtgtatgctatatgctgttttcataaatgttatcttggagaacttatgaaaataagatgaaaa 55064887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 29388560 - 29388666
Alignment:
Q  2 taagctatttctataacaaaaaataa-ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||| ||| |||||||||| |||| |||| ||||||||||||||| | |||  || ||  ||||| ||||| |||  ||||||| || ||||||||||    
T  29388560 taagctctttttataacaaaagataagataacgttaaattgtttttgtagatgtgataagtagtttttataagctatactggagaatttatgaaaataag 29388659  T
Q  101 ttgaaaa 107  Q
    |||||||    
T  29388660 ttgaaaa 29388666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 50662814 - 50662756
Alignment:
Q  49 atatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    ||||||||| || |||||  ||||| ||| ||||||||||| |||||||||||||||||    
T  50662814 atatgctataagttgtttatataagctatattggagaaattgtgaaaataagttgaaaa 50662756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 53294213 - 53294132
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    ||||||| |||||||||||||| ||||||||| || |||||| ||||  ||| || ||||| || |||||| ||| ||||||    
T  53294213 aaataaatttaaattgtttttgtatatgctataagttgtttttataaactatattagagaacttatgaaaacaagctgaaaa 53294132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 6364094 - 6364202
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||||||||| || ||||||||| ||||| | ||  |||| ||||| |||  |||| ||||| |||  ||||||| ||  ||||||||    
T  6364094 ataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataagcaattttcataagctataatggagaacttacgaaaataa 6364193  T
Q  100 gttgaaaac 108  Q
    | |||||||    
T  6364194 gctgaaaac 6364202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 21731742 - 21731674
Alignment:
Q  39 ttgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    ||||||||| || |||||| || |||||| ||||| ||| |||||||| || ||||| |||||||||||    
T  21731742 ttgtttttgtatgtgctataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaa 21731674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 27043929 - 27043869
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 86  Q
    |||||||||||||||||||| | ||| ||||| || |||||| ||||  ||||||||||||    
T  27043929 aaataaagttaaattgttttcgtataagctataagatgtttttataaactatcttggagaa 27043869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 29912897 - 29913000
Alignment:
Q  4 agctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagtt 102  Q
    ||||||||||||| |||||||| ||||||||| |||||| ||||| ||||| ||  ||  ||||| ||||| ||||||||| || || | |||||||| |    
T  29912897 agctatttctatagcaaaaaataaaataaagtaaaattg-ttttgtatatgttaaaagtcgttttcataagctatcttggacaacttataaaaataagct 29912995  T
Q  103 gaaaa 107  Q
    |||||    
T  29912996 gaaaa 29913000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41336706 - 41336758
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatg 53  Q
    ||||||||||| |||| |||| |  |||||||||||||||||||||| |||||    
T  41336706 ataagctatttttatagcaaagataaaataaagttaaattgtttttgtatatg 41336758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 52746952 - 52746884
Alignment:
Q  14 ataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttg 81  Q
    ||||||||| ||||| |||||||||||||||||||  || || || ||||||||| ||||| |||||||    
T  52746952 ataacaaaagataaaataaagttaaattgtttttgtgtaagccataagctgttttcataagctatcttg 52746884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 24915176 - 24915069
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||| ||||||||||| || || ||||| ||||||||||||||||||| ||||||||| ||||||||| ||||| | |||||||||| || |||||||||    
T  24915176 ataaactatttctatagcagaagataaaataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataa 24915077  T
Q  100 gttgaaaa 107  Q
    ||||||||    
T  24915076 gttgaaaa 24915069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 7472257 - 7472364
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||||||||||||||||||| ||| |  ||||||||||||||||| |||  |||| ||||||||  ||||| |||||||||||  || ||||||||||    
T  7472257 ataagctatttctataacaaaagatataataagttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataag 7472356  T
Q  101 ttgaaaac 108  Q
     |||||||    
T  7472357 ctgaaaac 7472364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 17603483 - 17603406
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttg 103  Q
    |||||| ||||||||||||||| ||||||||| || |||||| ||||| ||| |||||||| || |||||||||||||    
T  17603483 aaataacgttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataagttg 17603406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 4445657 - 4445761
Alignment:
Q  5 gctatttctataacaaaaaata-aataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttg 103  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| || |  | || |||| ||||| |  ||||||||  || |||||||||||||    
T  4445657 gctatttctataacaaaaaatacaataaagttaaattttttttgcataagccacaatctattttcataagctgacttggagagcttgtgaaaataagttg 4445756  T
Q  104 aaaac 108  Q
    |||||    
T  4445757 aaaac 4445761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 37842480 - 37842368
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||| ||||| || ||||||||||||| ||| || | ||| ||||| || |||||| ||||| ||||||| |||| || | |||||||    
T  37842480 ataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaaaataa 37842381  T
Q  100 gttgaaaactgct 112  Q
    | |||||||||||    
T  37842380 gctgaaaactgct 37842368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 47432041 - 47432147
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||| ||||  |||| ||||| ||||||||||||||||||| ||||||||| || |||||| ||||| ||| ||| |||| || |||||||||    
T  47432041 ataagctatttttatagaaaaagataaaataaagttaaattgtttttgaatatgctataaggtgtttt-ataagttatattgaagaatttatgaaaataa 47432139  T
Q  100 gttgaaaa 107  Q
    | ||||||    
T  47432140 gctgaaaa 47432147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 3234107 - 3234033
Alignment:
Q  33 gttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    ||||||||||||||| ||||||||| || |||||| ||||| ||| |||||||| || ||||||||||| |||||    
T  3234107 gttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaa 3234033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 27820461 - 27820355
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    ||||||||||| ||||  ||| |  |||||||| |||||||||| || ||| |||||  |||||||| ||||| |||||||||||| || ||||||||||    
T  27820461 ataagctatttttatagtaaatataaaataaagctaaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataag 27820362  T
Q  101 ttgaaaa 107  Q
     ||||||    
T  27820361 ctgaaaa 27820355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 473135 - 473216
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||||||||||||||||||| |  |||||||| || |||||| ||||| | | |||||||| || |||||||||||||||||    
T  473135 aaataaagttaaattgttttcgtgtatgctataagttgtttttataagttctattggagaacttatgaaaataagttgaaaa 473216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 1510432 - 1510328
Alignment:
Q  3 aagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagtt 102  Q
    ||||||||| || ||||||| |||||||| ||| ||||||||||| ||| | ||| || |||||| ||||| | | |||||||| ||  |||||||||||    
T  1510432 aagctatttttaaaacaaaagataaataatgttcaattgtttttgtataggttataagttgtttttataagctctattggagaacttacgaaaataagtt 1510333  T
Q  103 gaaaa 107  Q
    |||||    
T  1510332 gaaaa 1510328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 2294884 - 2294964
Alignment:
Q  28 ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    |||||||||||||||||||| ||| ||||| |||| |||| ||||  |||||||||||| ||  ||||||||| |||||||    
T  2294884 ataaagttaaattgtttttggataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaaaac 2294964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 2777874 - 2777945
Alignment:
Q  37 aattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    |||||| |||| ||| ||||| ||||||||||||||| || ||||||||| || |||||||||| |||||||    
T  2777874 aattgtctttgtataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaac 2777945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 17778929 - 17779010
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    ||||||||| ||||| |||| | ||||||||| ||| ||||| ||||| |||||||||||| ||||| ||||||| |||||||    
T  17778929 aaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaac 17779010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 34290207 - 34290289
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    |||||||||||| ||  ||||| ||| ||||| ||||||||| ||||| ||||||| |||| || |||||||||| |||||||    
T  34290207 aaataaagttaattttattttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaac 34290289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38578472 - 38578538
Alignment:
Q  1 ataagctatttctataacaaaaaataa-ataaagttaaattgtttttgcatatgctattagctgttt 66  Q
    |||||||||||||||||||||| |||| ||||||||||||| |||||| ||| ||||| || |||||    
T  38578472 ataagctatttctataacaaaagataacataaagttaaattatttttgtataagctataagttgttt 38578538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 30191937 - 30192010
Alignment:
Q  2 taagctatttctataacaaaaaataaa-taaagttaaattgtttt-tgcatatgctattagctgttttaataag 73  Q
    |||||||||| |||| ||||||||||| ||||||||| || |||| |||||||||||| ||||||||| |||||    
T  30191937 taagctatttttatagcaaaaaataaaataaagttaatttattttgtgcatatgctataagctgtttttataag 30192010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 37631658 - 37631577
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||| ||| |||||||||||||  |||| |||||||||||||  |||| ||| |||||||| || |||||||||| ||||||    
T  37631658 aaatgaagctaaattgtttttgtgtatgatattagctgtttttgtaagctatattggagaacttatgaaaataagctgaaaa 37631577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 41195288 - 41195211
Alignment:
Q  30 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    ||||||||| |||||||| |||| |||| | ||||||| ||||  |||||||||||| || |||||||||| ||||||    
T  41195288 aaagttaaactgtttttgtatatactatcaactgttttcataaactatcttggagaacttatgaaaataagctgaaaa 41195211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 42174806 - 42174908
Alignment:
Q  5 gctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttg 103  Q
    ||||||| |||| ||||| ||||| ||| ||||||  ||||||| ||||||||| || |||||| ||||| ||| |||||||| || ||||||||||||     
T  42174806 gctatttttatatcaaaagataaagtaatgttaaa--gtttttgtatatgctataagttgtttttataagttatattggagaacttatgaaaataagtta 42174903  T
Q  104 aaaac 108  Q
    |||||    
T  42174904 aaaac 42174908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 27976570 - 27976626
Alignment:
Q  30 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 86  Q
    |||||||||||||||||| ||||||||| || |||||| ||||| |||||| |||||    
T  27976570 aaagttaaattgtttttgtatatgctataagttgttttcataagctatcttcgagaa 27976626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 6265039 - 6265122
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttgga 83  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||| |||   |||| ||| ||||| ||||| |||| ||||    
T  6265039 ataagctacttctataacaaaaaataaaataaagtcaaattgtttttacattaactataagccgttttcataagttatcatgga 6265122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 15687196 - 15687153
Alignment:
Q  3 aagctatttctataacaaaaaat-aaataaagttaaattgtttt 45  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  15687196 aagctatttctataacaaaatataaaataaagttaaattgtttt 15687153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 37517319 - 37517220
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||| |||||||||| ||||| ||||| ||||||||||||||||||| ||||  ||| || | |||||||||| ||| || ||||| |  |||||||||    
T  37517319 ataagttatttctataccaaaatataaaataaagttaaattgtttttgtatatattataagttattttaataagctatattagagaactcctgaaaataa 37517220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 38883035 - 38882929
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||||||||||||| ||||| |||||||| | |||||||| |||| |||   ||| || |||||| ||||| | || | ||||| || ||||||||||    
T  38883035 ataagctatttctatagcaaaagataaataacgctaaattgtctttgtataaaatataagttgttttcataagctctc-tagagaacttatgaaaataag 38882937  T
Q  101 ttgaaaac 108  Q
    ||||||||    
T  38882936 ttgaaaac 38882929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 46423329 - 46423395
Alignment:
Q  6 ctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataag 73  Q
    |||| |||||| ||||||||||| | |||||||||||||| ||||| ||||| ||||||||| |||||    
T  46423329 ctatatctatagcaaaaaataaa-atagttaaattgttttggcataagctataagctgttttcataag 46423395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 7218173 - 7218091
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    ||||||||| ||||||||||   ||| ||||| || |||||| ||||  |||| ||||||| || ||||||||||||||||||    
T  7218173 aaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaac 7218091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 9656601 - 9656695
Alignment:
Q  7 tatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||||||| ||||||||||| |||||||||||| ||||   ||| ||||| |||||| || ||||| |||| ||||  |||| ||||||||||    
T  9656601 tatttctatagcaaaaaataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggatgaattatgaaaataag 9656695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 29793729 - 29793835
Alignment:
Q  3 aagctatttctataacaaaaaataa-ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagt 101  Q
    |||||||||||| ||||||| |||| |||||||||| ||||||| | ||| ||||| || ||  || ||||| |||||| ||||  || ||||| |||||    
T  29793729 aagctatttctacaacaaaagataacataaagttaagttgttttcgtataagctataagttgagttcataagctatcttcgagagcttatgaaactaagt 29793828  T
Q  102 tgaaaac 108  Q
    |||||||    
T  29793829 tgaaaac 29793835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 34952186 - 34952272
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaactgct 112  Q
    |||||||||||||||||||| | ||| ||| | || |||||| ||||| ||||   ||||| || |||||||||| |||||||||||    
T  34952186 aaataaagttaaattgttttcgaataagctgtaagttgttttcataagctatcaaagagaacttatgaaaataagctgaaaactgct 34952272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 45975677 - 45975743
Alignment:
Q  42 tttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    |||||| ||| ||||  ||||||||| ||||| |||||||||||| || |||||||||| |||||||    
T  45975677 tttttgtataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaac 45975743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 3070034 - 3069973
Alignment:
Q  26 aaataaagttaaattgttttt-gcatatgctattagctgttttaataagatatcttggagaa 86  Q
    |||| |||||||||||||||| | ||||||||| |||||||||  |||| ||||||||||||    
T  3070034 aaatgaagttaaattgtttttcgtatatgctataagctgttttcgtaagctatcttggagaa 3069973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 7137069 - 7137016
Alignment:
Q  54 ctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||| ||||||||| ||||| |||||||||||| || |||||||||| ||||||    
T  7137069 ctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaa 7137016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13809943 - 13810000
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctat 57  Q
    ||||| ||||||| || ||||| ||||| ||||||||||||||||||| |||||||||    
T  13809943 ataagttatttctttagcaaaagataaaataaagttaaattgtttttgtatatgctat 13810000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 14576752 - 14576672
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||||||||||||||||||||| ||||||||| |  | |||| ||||| ||| || ||| || |||||||||||| ||||||    
T  14576752 aaataaagttaaattgtttttgtatatgctataatttttttttataagctatattagag-aactttgaaaataagctgaaaa 14576672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26293231 - 26293186
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttt 45  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||    
T  26293231 ataagctatttctataacaaaaagtaaaataaagtcaaattgtttt 26293186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 26630413 - 26630494
Alignment:
Q  6 ctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 86  Q
    |||||||||||||||||||| ||||||||| ||||||||||   ||| ||||| | ||||||| ||| | |||| |||||||    
T  26630413 ctatttctataacaaaaaatgaaataaagtaaaattgttttcatataagctataaactgttttgatacgctatcctggagaa 26630494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 31517862 - 31517757
Alignment:
Q  4 agctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagtt 102  Q
    ||||||||||| ||||||| ||||| ||||||||||||| |||   ||| ||||| |||||| || ||||  | |||||||||  || |||||||||| |    
T  31517862 agctatttctacaacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagct 31517763  T
Q  103 gaaaac 108  Q
    ||||||    
T  31517762 gaaaac 31517757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34619503 - 34619446
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctat 57  Q
    |||||| ||||||||||||||| ||||| ||| ||||||||||||||| ||| |||||    
T  34619503 ataagccatttctataacaaaagataaaataaggttaaattgtttttgtataagctat 34619446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 41505660 - 41505717
Alignment:
Q  29 taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 86  Q
    ||||||||||||||||| | ||||| ||| ||||||||| ||||| ||| ||||||||    
T  41505660 taaagttaaattgttttcgtatatgttataagctgtttttataagctatattggagaa 41505717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 51695593 - 51695513
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    ||||||||| |||||||||| | ||| | ||| || |||||| ||||| |||||||||||| || |||||||||| ||||||    
T  51695593 aaataaagt-aaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaa 51695513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 1510088 - 1509977
Alignment:
Q  3 aagctatttctataacaaaaaata-aataaagttaaattgtttttgcatatgctattagctgttttaataagatatctt-ggagaaattttgaaaataag 100  Q
    |||||||||| |||||||||||   ||||||||||||||||||||| ||| || || | ||||||| ||||  |||||| |||| | || ||||||||||    
T  1510088 aagctatttcgataacaaaaaacgtaataaagttaaattgtttttg-atacgcgataaactgttttcataacctatcttaggagtatttatgaaaataag 1509990  T
Q  101 ttgaaaactgcta 113  Q
     ||||||| ||||    
T  1509989 ctgaaaacagcta 1509977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 4549813 - 4549853
Alignment:
Q  3 aagctatttctataacaaaaaat-aaataaagttaaattgt 42  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  4549813 aagctatttctataacaaaagataaaataaagttaaattgt 4549853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 9572230 - 9572166
Alignment:
Q  4 agctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgtttt 67  Q
    ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||| ||||| ||| |||||    
T  9572230 agctatttctatagcaaaagataaaataaagttaaattgcttttgtataagctataagccgtttt 9572166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28389197 - 28389153
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttt 45  Q
    |||||||||||  ||||||||| ||||||||||| ||||||||||    
T  28389197 ataagctattttgataacaaaagataaataaagtcaaattgtttt 28389153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12464598 - 12464491
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||||| ||  |||| ||||| ||||||||||||||||||| ||||||||| |||| |||| ||||| |||||||||||| || |||||||||    
T  12464598 ataagctatttctgtagaaaaagataaaataaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataa 12464499  T
Q  100 gttgaaaa 107  Q
    | ||||||    
T  12464498 gctgaaaa 12464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 4026762 - 4026874
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||| |||| ||||| ||||| |||||||||||| ||||||||||   ||| ||||||||| ||||  |||| || |||| || |||||||||    
T  4026762 ataagctatttttatagcaaaagataaaataaagttaaattatttttgcataaattataagctgttttcataaattatcctgaagaacttatgaaaataa 4026861  T
Q  100 gttgaaaactgct 112  Q
    | |||||||||||    
T  4026862 gctgaaaactgct 4026874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 43279652 - 43279547
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||| |||| ||||| ||||| ||| || ||||||||||||  |||||||| || |||||| ||||| ||| |||||||| || |||||||||    
T  43279652 ataagctatttttatatcaaaagataaaataatgtgaaattgtttttg--tatgctataagttgtttttataagctatattggagaacttgtgaaaataa 43279555  T
Q  100 gttgaaaa 107  Q
    ||||||||    
T  43279554 gttgaaaa 43279547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 18066099 - 18066180
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    ||||||||||||||||||||   ||| ||||| ||||||||| ||||| |||||||||||| ||  ||||||||| ||||||    
T  18066099 aaataaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaa 18066180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 41851507 - 41851580
Alignment:
Q  27 aataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    ||||||||||||||||||||| ||||||||| || |||||| | ||| |||||||||||| || ||||| ||||    
T  41851507 aataaagttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaag 41851580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 42457893 - 42458001
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||| |||||||||||  |||| ||||| |||||||||||||||||||  || ||| |||||||| || ||||| |||||| |||||  | |||||||||    
T  42457893 ataatctatttctatagtaaaagataaaataaagttaaattgtttttgtttaagctcttagctgtattcataagctatcttagagaacatatgaaaataa 42457992  T
Q  100 gttgaaaac 108  Q
    | |||||||    
T  42457993 gctgaaaac 42458001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41241257 - 41241150
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||||||||  |||| ||||| | ||||||||||||||||| ||||||||| ||  |||||  |||| ||||||||| || || ||||| |||    
T  41241257 ataagctatttctataggaaaagataaaatgaagttaaattgtttttgtatatgctataagtagttttcctaagttatcttggaaaacttgtgaaattaa 41241158  T
Q  100 gttgaaaa 107  Q
    | ||||||    
T  41241157 gctgaaaa 41241150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 33319907 - 33319830
Alignment:
Q  30 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    ||||||||| |||||||| |||| |||| | ||||||| ||||  |||||||||||| || |||||||||| ||||||    
T  33319907 aaagttaaactgtttttgtatatactataaactgttttcataaactatcttggagaacttatgaaaataagctgaaaa 33319830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41407246 - 41407346
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattg-tttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaata 98  Q
    ||||||||||||| || ||||| ||||| ||||||||||||| |||||| ||||||||| || | |||| ||||| | |||| ||||| || ||||||||    
T  41407246 ataagctatttctgtaccaaaagataaaataaagttaaattgttttttgtatatgctataagttatttttataagttttctttgagaacttgtgaaaata 41407345  T
Q  99 a 99  Q
    |    
T  41407346 a 41407346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 26202025 - 26202080
Alignment:
Q  52 tgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||||| || |||||| ||||||||| |||||||| || |||||||||||||||||    
T  26202025 tgctataagttgtttttataagatatattggagaacttatgaaaataagttgaaaa 26202080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 39073788 - 39073709
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaa 105  Q
    |||||| ||||||||||||||| ||||||||| ||   |||| ||||| ||| |||||||| |  |||||||||||||||    
T  39073788 aaataacgttaaattgtttttgtatatgctataagtaatttttataagctatattggagaactagtgaaaataagttgaa 39073709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 45229457 - 45229563
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||| ||||  || |||| | ||||||||||||||| ||||| ||| |  |||||| ||||| |||||| ||||| || |||||||||    
T  45229457 ataagctatttctatagcaaacgataaaatgaggttaaattgtttttgtatatgttatca-ttgttttcataagctatcttcgagaacttatgaaaataa 45229555  T
Q  100 gttgaaaa 107  Q
    | ||||||    
T  45229556 gctgaaaa 45229563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 1625871 - 1625953
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    |||||||||||||||||||| | ||| | ||| || |||||| ||||| |||||||||||| ||  |||||| || |||||||    
T  1625871 aaataaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaac 1625953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 26626848 - 26626926
Alignment:
Q  30 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    |||||||||||||||| | ||| ||||  ||||||||| ||||| ||||||| |||| || |||||||||  |||||||    
T  26626848 aaagttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaac 26626926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 29316899 - 29316793
Alignment:
Q  2 taagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||||| ||| ||||| || ||||| ||| |||||||||||||  ||||  |||| ||||||||| || || |||||||||||| || || |||||||    
T  29316899 taagctatatctttaacagaagataaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataag 29316800  T
Q  101 ttgaaaa 107  Q
     ||||||    
T  29316799 ctgaaaa 29316793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 656902 - 656793
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||||||||| || ||||| | | |||||||||| | ||| ||| | || || ||| ||||| ||||||| |||  || |||||||||    
T  656902 ataagctatttctataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaataa 656803  T
Q  100 gttgaaaact 109  Q
    | ||||||||    
T  656802 gatgaaaact 656793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 680483 - 680556
Alignment:
Q  35 taaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    ||||||||||| | ||| ||||| |||| |||| ||||| ||||||| |||| || |||||||||| |||||||    
T  680483 taaattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaac 680556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 10490600 - 10490681
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||||| |||||||||||| || ||||||||| || |||||| |||||  ||||| || || || | |||||||||||||||    
T  10490600 aaataacgttaaattgtttctgtatatgctataaggtgttttcataagtcatcttcgaaaagttatcaaaataagttgaaaa 10490681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29633017 - 29633062
Alignment:
Q  1 ataagctatttctataacaaaaaata-aataaagttaaattgtttt 45  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||||    
T  29633017 ataagttatttctataacaaaaaatagaataaagtcaaattgtttt 29633062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39567848 - 39567921
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataag 73  Q
    ||||| |||||||||||||||| || |||||||||||||||||||    ||| ||||| ||||||||| |||||    
T  39567848 ataagatatttctataacaaaagataaaataaagttaaattgtttcaagataagctataagctgttttcataag 39567921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40837553 - 40837508
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttt 45  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||    
T  40837553 ataagctatttctataacaaaagataaattaaagtcaaattgtttt 40837508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42907304 - 42907349
Alignment:
Q  1 ataagctatttctataacaaaa-aataaataaagttaaattgtttt 45  Q
    ||||||||||||||||||| || || ||||||||||||||||||||    
T  42907304 ataagctatttctataacagaagaaaaaataaagttaaattgtttt 42907349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3611171 - 3611271
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||| |||||||||| |||||  |||| ||||||||||||||||||| |||   |||   ||||||| | ||| |||||||||||| || |||||||||    
T  3611171 ataagttatttctatagcaaaaggtaaaataaagttaaattgtttttgtatagtttatagactgttttcacaagctatcttggagaacttatgaaaataa 3611270  T
Q  100 g 100  Q
    |    
T  3611271 g 3611271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 19629246 - 19629290
Alignment:
Q  3 aagctatttctataacaaaaaataaa-taaagttaaattgttttt 46  Q
    |||||||||||||||||||||||||| |||||| |||| ||||||    
T  19629246 aagctatttctataacaaaaaataaattaaagtcaaatagttttt 19629290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 19826147 - 19826191
Alignment:
Q  3 aagctatttctataacaaaaaataaa-taaagttaaattgttttt 46  Q
    |||||||||||||||||||||||||| |||||| |||| ||||||    
T  19826147 aagctatttctataacaaaaaataaattaaagtcaaatagttttt 19826191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29430701 - 29430745
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttt 45  Q
    ||||||||||||||||||||||  |||||||||| ||| ||||||    
T  29430701 ataagctatttctataacaaaagttaaataaagtcaaactgtttt 29430745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 37353368 - 37353266
Alignment:
Q  6 ctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaa 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||  |||||||| |||||||||  |||| |||||| ||||  || |||||||||  ||||    
T  37353368 ctatttctataacaaaagataaataaagttaaattgtttttgtgtatgctataagctgttttcttaagctatctttgagagcttatgaaaataatctgaa 37353269  T
Q  106 aac 108  Q
    |||    
T  37353268 aac 37353266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 26771210 - 26771317
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||||||||  |||  ||||| |||| |||||||||||||| ||||||||| |||| |||| ||||||||| || ||||| || |||||||||    
T  26771210 ataagctatttctatagtaaagcataaaataaacttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataa 26771309  T
Q  100 gttgaaaa 107  Q
    ||||||||    
T  26771310 gttgaaaa 26771317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 18930647 - 18930755
Alignment:
Q  1 ataagctatttctataacaaaaaataaat-aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||| || |||||||||| |||||| |||||||||||||| ||| ||||||| | | |||||| |||||| |||||| ||||| || ||| |||||    
T  18930647 ataagctagttatataacaaaagataaatgaaagttaaattgttattgtatatgctgtaaactgtttcaataagctatcttcgagaacttatgagaataa 18930746  T
Q  100 gttgaaaac 108  Q
    | |||||||    
T  18930747 gatgaaaac 18930755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 27028807 - 27028883
Alignment:
Q  31 aagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||||||||||||| || ||||||||| ||||||||| ||||| |||||||||||  || |||||||||| ||||||    
T  27028807 aagttaaattgtttgtgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaa 27028883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 10114435 - 10114542
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||||||||||||| ||||| |||||  ||||| ||||||||| | ||| ||||| ||||||||| || || ||| ||||||||  | ||||||||||    
T  10114435 ataagctatttctatagcaaaagataaaataagttgaattgttttggtataagctataagctgttttcattagctatattggagaacatatgaaaataag 10114534  T
Q  101 ttgaaaac 108  Q
     |||||||    
T  10114535 ctgaaaac 10114542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 38602304 - 38602378
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||| ||||||||||| ||||||||||||||| ||||||||| ||||| |||  ||||||| || ||||||||||    
T  38602304 aaatgaagttaaattgcttttgcatatgctataagctgtttttataagctatactggagaatttgtgaaaataag 38602378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 27049319 - 27049419
Alignment:
Q  7 tatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaa 106  Q
    |||||||||| ||||| |||||||||||| |||| |||| | ||| ||||| | || |||| ||||| ||| ||||||||||| |||||||||| |||||    
T  27049319 tatttctatagcaaaagataaataaagttcaattattttcgtataagctataaacttttttcataagctat-ttggagaaattatgaaaataagatgaaa 27049417  T
Q  107 ac 108  Q
    ||    
T  27049418 ac 27049419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 16733980 - 16734047
Alignment:
Q  7 tatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataag 73  Q
    |||||||||| ||||| ||||| |||| |||||||||||||| ||||||||| || |||||| |||||    
T  16733980 tatttctatagcaaaagataaactaaacttaaattgtttttgtatatgctataagttgttttgataag 16734047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4558743 - 4558809
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttt 66  Q
    ||||||||||||||||| |||| ||||| |||||||||||| ||||   ||||||||| ||||||||    
T  4558743 ataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgttt 4558809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 42043466 - 42043384
Alignment:
Q  5 gctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 86  Q
    |||||||||||| ||||| ||||| |  |||||||||||||||| ||||| ||| || |||||| ||||| |||||| |||||    
T  42043466 gctatttctatagcaaaagataaaatgcagttaaattgtttttggatatgatataagttgttttcataagctatcttagagaa 42043384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 11569523 - 11569474
Alignment:
Q  59 agctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    ||||||||| ||||| |||| |||||| |||||||||||||| |||||||    
T  11569523 agctgttttcataagctatcatggagagattttgaaaataagctgaaaac 11569474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13561437 - 13561392
Alignment:
Q  1 ataagctatttctataaca-aaaaataaataaagttaaattgtttt 45  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||    
T  13561437 ataagctatttctataacagaaaattaaataaagtcaaattgtttt 13561392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 18133627 - 18133708
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||| ||||||||||| ||||| |||| |||| ||||| ||| ||||  ||| |||||||| || |||||||||| ||||||    
T  18133627 aaatgaagttaaattgcttttgtatatcctataagctggttttataaactatattggagaacttatgaaaataagctgaaaa 18133708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37444540 - 37444495
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttt 45  Q
    |||||||||| ||||||||||| ||||| |||||||||||||||||    
T  37444540 ataagctattactataacaaaagataaagtaaagttaaattgtttt 37444495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42597346 - 42597391
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttt 45  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||    
T  42597346 ataagctatttctataacaaaagataaaataaagtaaaattgtttt 42597391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 10758376 - 10758324
Alignment:
Q  6 ctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctat 57  Q
    ||||||||||| ||||  ||||| ||||||||||||||||||| |||||||||    
T  10758376 ctatttctatagcaaatcataaaataaagttaaattgtttttgtatatgctat 10758324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12497356 - 12497292
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgt 64  Q
    |||||| |||| |||| ||||| ||||| ||||||||| ||||||||| ||||||||| ||||||    
T  12497356 ataagccatttttatagcaaaagataaaataaagttaacttgtttttgtatatgctataagctgt 12497292  T

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Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 6909998 - 6909892
Alignment:
Q  1 ataagctatttctataacaaaa--aataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaata 98  Q
    ||||||||||||||||  ||||  || |||||||||||||||||||||| ||||||||| || |||||| |||| ||||||||||||| || ||||| ||    
T  6909998 ataagctatttctataggaaaagaaaaaaataaagttaaattgtttttgtatatgctataagttgttttcataacatatcttggagaatttatgaaatta 6909899  T
Q  99 agttgaa 105  Q
    || ||||    
T  6909898 agctgaa 6909892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31624203 - 31624302
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagtt-aaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||||||||| |||||  ||||| |||||||||| | |||  |||||||||||||||||||| | |||||| |||||| |||||||||    
T  31624203 ataagctatttctataacaaaagataaaataagtttaaattgttttcgtataatctattagctgttttaataagctgtcttggtgaaattatgaaaataa 31624302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 9093681 - 9093573
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||| | ||| ||||| ||||||||| ||||| | |||| ||||| ||  ||||||||    
T  9093681 ataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataa 9093582  T
Q  100 gttgaaaac 108  Q
    | |||||||    
T  9093581 gctgaaaac 9093573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 34430564 - 34430479
Alignment:
Q  22 aaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    ||||||||||| | |||||||||||| ||||| ||| || |||||| ||||| |||||||||||| || |||||||||| ||||||    
T  34430564 aaataaataaaataaaattgtttttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaa 34430479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 35098981 - 35099089
Alignment:
Q  2 taagctatttctata--acaaaaaataaataaa-gttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaata 98  Q
    |||||||||||||||  | |||||||||| ||  ||| ||||||||||| ||||| ||| || |||||| ||||| |||||| ||| | |||||||||||    
T  35098981 taagctatttctataggaaaaaaaataaaaaattgtttaattgtttttgtatatgttataagttgttttcataagctatcttagagtatttttgaaaata 35099080  T
Q  99 agttgaaaa 107  Q
    |||||||||    
T  35099081 agttgaaaa 35099089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2735014 - 2735114
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||| |||||||||||| ||||| |||||||||||| |||||| |||  |||| ||||||||| |||||  |||||| | || || |||||||||    
T  2735014 ataagctatgtctataacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataa 2735113  T
Q  100 g 100  Q
    |    
T  2735114 g 2735114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 31624088 - 31624143
Alignment:
Q  53 gctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    ||||| ||||||||| ||| | ||||||||||||||| ||||||||||||||||||    
T  31624088 gctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaac 31624143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 6536597 - 6536667
Alignment:
Q  37 aattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    ||||||||||| ||||||||| || |||||| | ||| ||| |||||||| || |||||||||||||||||    
T  6536597 aattgtttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaaaa 6536667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 11784135 - 11784069
Alignment:
Q  20 aaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 86  Q
    |||| ||||| || |||||||||||||| ||||||||| ||||||||| ||||| ||| ||||||||    
T  11784135 aaaattaaattaaattaaattgtttttgtatatgctataagctgttttcataagctatattggagaa 11784069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24626240 - 24626329
Alignment:
Q  1 ataagctatttctataacaaaaaataaat-aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaatt 89  Q
    ||||||||||||||||  |||  |||||  |||||||||||||||||| |||| |||| || |||||| ||||| |||||||||| ||||    
T  24626240 ataagctatttctataggaaaggataaaacaaagttaaattgtttttgtatattctataagttgttttcataagctatcttggagtaatt 24626329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 835324 - 835266
Alignment:
Q  50 tatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    |||||||| ||| ||||| ||||| |||||||||||| || |||||||||| |||||||    
T  835324 tatgctataagcagttttcataagctatcttggagaacttatgaaaataagctgaaaac 835266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 836636 - 836558
Alignment:
Q  30 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    |||||||||||||||| | ||  |||||||||||| || ||||| |||||||| ||| || ||||||| || |||||||    
T  836636 aaagttaaattgttttggtatgagctattagctgtgttcataagctatcttggggaacttatgaaaatgagctgaaaac 836558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 6538485 - 6538562
Alignment:
Q  28 ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaa 105  Q
    |||| |||||||||||| || ||||||||| || |||||| ||| | ||| |||||||| || | |||||||||||||    
T  6538485 ataatgttaaattgtttatgtatatgctataagttgtttttataggctatattggagaacttattaaaataagttgaa 6538562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6654560 - 6654645
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggaga 85  Q
    ||||| ||||||||||||||| ||| |||| |||| ||||||||||||  ||  || | ||||||||||||| | |||||||||||    
T  6654560 ataagttatttctataacaaataataaaattaagtcaaattgtttttgtttaaactttaagctgttttaatatgctatcttggaga 6654645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29274354 - 29274277
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatat 77  Q
    |||||||||||||||| ||||| || ||||||||| ||||||||||   ||| ||||| | ||||||| |||||||||    
T  29274354 ataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataagatat 29274277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 8147647 - 8147731
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggag 84  Q
    ||||||||||| |||| ||||| ||||| ||||||| ||||||||||| |||| |||  || |||||| ||||| ||| ||||||    
T  8147647 ataagctatttttatagcaaaagataaaataaagttgaattgtttttgtatattctaaaagatgttttcataagctatattggag 8147731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 12836376 - 12836456
Alignment:
Q  6 ctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 86  Q
    |||| |||||| ||||| ||||||||||||||| ||| | ||  ||||| || |||| |||| ||||| ||||||||||||    
T  12836376 ctatatctatagcaaaagataaataaagttaaaatgtgtgtgggtatgcaataagctcttttcataagttatcttggagaa 12836456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 20368279 - 20368199
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaa 106  Q
    |||| ||||| ||||||||||| ||  | ||| || |||||| ||||| | |||||||||| || ||||||||||||||||    
T  20368279 aaatgaagttgaattgtttttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaaa 20368199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 27893992 - 27894099
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||| |||| || ||||| |||||| ||||||||||   |||  ||||||| |||||| ||||||||||||| | |  || |||||||||    
T  27893992 ataagctatttctacaacagaatataaaataaagtcaaattgttttaatataaactattag-tgttttcataagatatcttgaaaagcttatgaaaataa 27894090  T
Q  100 gttgaaaac 108  Q
    | |||||||    
T  27894091 gctgaaaac 27894099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36189511 - 36189610
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||||| | |||||| ||||| ||||||||||||||||||| ||||| ||| |||| |||| ||||||||| |||||||| || |||||||||    
T  36189511 ataagctatttctcttacaaaagataaaataaagttaaattgtttttgtatatgatataagctatttttataagatatattggagaacttatgaaaataa 36189610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30956751 - 30956665
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 86  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||| ||| ||||| || |||||| | ||| ||||||||||||    
T  30956751 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaa 30956665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30972563 - 30972477
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 86  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||| ||| ||||| || |||||| | ||| ||||||||||||    
T  30972563 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaa 30972477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 39980701 - 39980781
Alignment:
Q  27 aataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    ||||| ||||||||||||||| | ||||||| || |||||| ||||| ||| |||||||| || |||||||||||||||||    
T  39980701 aataacgttaaattgtttttgaacatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaa 39980781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 20880422 - 20880521
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    ||||||||||| |||| ||||  |||||  ||||||||||||||||| ||||||||| | ||||||| | ||| ||| |||||||| || ||||||||||    
T  20880422 ataagctatttttatagcaaatgataaaacaagttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataag 20880521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 46886808 - 46886718
Alignment:
Q  8 atttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||| ||||| ||||| | ||||||||| |||||| ||  ||||| ||||||||| ||||| |||||||||||| ||||||||||||    
T  46886808 atttctatatcaaaagataaa-atagttaaattatttttgtatgagctataagctgttttcataagctatcttggagaacttttgaaaataa 46886718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 36783457 - 36783351
Alignment:
Q  3 aagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagt 101  Q
    |||||||||||||| ||||| ||||| |||||| ||||||||||   |||  |||||||||||||| ||||| ||| |||||| |||| |||| |||||     
T  36783457 aagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctatattggagcaattatgaatataagc 36783358  T
Q  102 tgaaaac 108  Q
    |||||||    
T  36783357 tgaaaac 36783351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 30443864 - 30443945
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||| ||||||||||| ||||| ||||||||| ||||||||| ||||  ||| |||||||| || |||||||||| ||||||    
T  30443864 aaatgaagttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaa 30443945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 35127492 - 35127411
Alignment:
Q  5 gctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggaga 85  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||| | || |||| |||   |||||||||||    
T  35127492 gctatttctataacaaaagatatactaaagttaaattgtttttgcatatgctataaactattttcatacactatcttggaga 35127411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 47132310 - 47132383
Alignment:
Q  34 ttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||||||||||||| |||||||||  | |||||| ||||| ||| |||||||| || |||||||||||||||||    
T  47132310 ttaaattgtttttgtatatgctataggttgtttttataagctatattggagaagttatgaaaataagttgaaaa 47132383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 39602334 - 39602227
Alignment:
Q  1 ataagctatttctataacaaaaaataa-ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||||||||  |||| |||| ||||||||||||||||   | ||| | ||| ||||||||| ||||| |||||| ||||| || |||||||||    
T  39602334 ataagctatttctatagaaaaagataacataaagttaaattgttgc-gtataagttataagctgttttcataagctatctttgagaacttatgaaaataa 39602236  T
Q  100 gttgaaaac 108  Q
    |||||||||    
T  39602235 gttgaaaac 39602227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 44061148 - 44061048
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||| ||||| ||||| ||| ||||||||||||||  ||| ||||| || |||||| ||| |||||||| ||||| || ||||| |||    
T  44061148 ataagctatttctatagcaaaagataaaataaggttaaattgtttttctataagctataagttgttttcatatgatatcttagagaacttatgaaattaa 44061049  T
Q  100 g 100  Q
    |    
T  44061048 g 44061048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 402666 - 402559
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    ||||||||||||||||  |||| |||| |||| |||||||||||| | ||| | ||| ||||||||| ||||  ||||||| |||| || ||||| ||||    
T  402666 ataagctatttctatagaaaaagataattaaatttaaattgttttcgtataagttataagctgtttttataatctatcttgaagaacttgtgaaattaag 402567  T
Q  101 ttgaaaac 108  Q
     |||||||    
T  402566 ctgaaaac 402559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 35959581 - 35959474
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||||||||  |||  ||||| |||||||||||| |||||| ||||||| | || |||||  ||||| ||| || ||||| ||||||||||||    
T  35959581 ataagctatttctatagaaaaggataaaataaagttaaattatttttgtatatgctgtaagttgtttctataagctatattagagaatttttgaaaataa 35959482  T
Q  100 gttgaaaa 107  Q
    | ||||||    
T  35959481 gctgaaaa 35959474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 36631175 - 36631076
Alignment:
Q  2 taagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||||||||||||  |||  ||||| ||||||||||||||||||| | ||||||| || |||||| || || ||| |||||||| || ||||||||||    
T  36631175 taagctatttctatagtaaaggataaagtaaagttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataag 36631076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 21367638 - 21367720
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    |||||||||||||||||||| | |||   ||| || |||||| ||||| |||||||||||| || |||||||||| |||||||    
T  21367638 aaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaac 21367720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2128376 - 2128331
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttt 45  Q
    |||||||||||||||||||||| || ||||||||||||||||||||    
T  2128376 ataagctatttctataacaaaagataaaataaagttaaattgtttt 2128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15304472 - 15304427
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttt 45  Q
    |||||||||||||||||||||| || ||||||||||||||||||||    
T  15304472 ataagctatttctataacaaaagataaaataaagttaaattgtttt 15304427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 20170494 - 20170575
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||||| ||||||||||||||| ||||||||| || |||||| | ||| ||| || ||||| |  |||||||||||||||||    
T  20170494 aaataatgttaaattgtttttgtatatgctataagttgtttttacaagttatttttgagaactaatgaaaataagttgaaaa 20170575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 49034355 - 49034291
Alignment:
Q  33 gttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaat 97  Q
    |||||||||||| |||||||||||| || |||||| ||||| ||| |||||||| || |||||||    
T  49034355 gttaaattgtttgtgcatatgctataagttgtttttataagctatattggagaacttctgaaaat 49034291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3845687 - 3845580
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||||||||   ||| ||||| | ||||| || |||||||  ||||||||   |||||||| ||||| |||||||||||| || |||||||||    
T  3845687 ataagctatttctatagagaaagataaaattaagttgaaatgtttttctatatgctacatgctgttttcataagttatcttggagaacttatgaaaataa 3845588  T
Q  100 gttgaaaa 107  Q
    | ||||||    
T  3845587 gctgaaaa 3845580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 52618948 - 52619055
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||| ||||||  || ||||||||||||||||||||   ||| | ||| ||||||||| | ||| ||||||| |||  || |||||||||    
T  52618948 ataagctatttctaaaacaaatgattaaataaagttaaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaataa 52619047  T
Q  100 gttgaaaa 107  Q
    | ||||||    
T  52619048 ggtgaaaa 52619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 2719416 - 2719513
Alignment:
Q  3 aagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||||||||| | ||||| ||||| |||||| |||||||||| |  || ||||| | ||||||| ||||| |||||||||||| || ||||||||||    
T  2719416 aagctatttctaaagcaaaatataaaataaagtgaaattgtttt-gtttaagctataaactgttttcataagctatcttggagaacttatgaaaataag 2719513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 14145883 - 14145957
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||||||||||||||||| | ||||||||| || | |||| ||||| |||||||||  | || ||||||||||    
T  14145883 aaataaagttaaattgttttcgtatatgctataagttattttcataagctatcttggattacttatgaaaataag 14145957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42808924 - 42808970
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgttttt 46  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  42808924 ataagctgtttctataacaaaagataaaataaagttaaattgttttt 42808970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10101601 - 10101556
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttt 45  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgtttt 10101556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10212526 - 10212481
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttt 45  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgtttt 10212481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 20257506 - 20257547
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgtttt 67  Q
    |||||||||||||||||||||| ||||||||| || ||||||    
T  20257506 aaataaagttaaattgtttttgtatatgctataagttgtttt 20257547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32095316 - 32095235
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttg 81  Q
    ||||| |||||||||||||||| ||||| | ||||||||||||||||| |||  |||| ||| ||||| ||||  |||||||    
T  32095316 ataagttatttctataacaaaagataaaattaagttaaattgtttttgtataaactataagccgttttcataatctatcttg 32095235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42809246 - 42809291
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttt 45  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||    
T  42809246 ataagctatttctataacaaaagataaaatatagttaaattgtttt 42809291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 50952279 - 50952363
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctat-tagctgttttaataagatatcttggaga 85  Q
    |||||||||||||||||||||  |||||||||||| |||||||||   ||| ||||| ||| |||| ||||||  |||||||||||    
T  50952279 ataagctatttctataacaaaggataaataaagtt-aattgttttcatataagctatatagttgttgtaataaactatcttggaga 50952363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 16073168 - 16073068
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||| |||||  | |||| || |||||| ||||||| ||||| ||| |||||| || ||||| ||||||| |||| |  |||||||||    
T  16073168 ataagctatttctatagcaaaagttaaaattaatttaaatagtttttgtatatgttataagctgtcttcataagttatcttgaagaattgatgaaaataa 16073069  T
Q  100 g 100  Q
    |    
T  16073068 g 16073068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 25447364 - 25447288
Alignment:
Q  6 ctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttg 81  Q
    |||||||||||  |||| ||||| |||| |||||||||||||| ||| ||||| | ||||||| ||||| |||||||    
T  25447364 ctatttctatagtaaaagataaaataaacttaaattgtttttgtataagctataaactgttttcataagctatcttg 25447288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 45535405 - 45535361
Alignment:
Q  3 aagctatttctataacaaaaaataaa-taaagttaaattgttttt 46  Q
    |||||||||||||||||||||||||| |||||| |||| ||||||    
T  45535405 aagctatttctataacaaaaaataaattaaagtcaaatagttttt 45535361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 9e-18; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 12425542 - 12425624
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    |||||||||||||||||||| | ||| ||||| ||||||||| | ||| |||||||||||| || ||||||||||||||||||    
T  12425542 aaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaac 12425624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4014549 - 4014441
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||| ||||| ||||| |||||||| |||||||||| | |    || ||||||||| ||||| |||||||||||| || |||||||||    
T  4014549 ataagctatttctatagcaaaagataaaataaagttagattgtttttggaaaaatgataagctgttttcataagctatcttggagaacttatgaaaataa 4014450  T
Q  100 gttgaaaac 108  Q
    | |||||||    
T  4014449 gctgaaaac 4014441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 39105409 - 39105509
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||| | ||| || |||| ||||||||||||||| | ||| ||||| | ||||||| ||||| |||||||||||| || |||||||||    
T  39105409 ataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataa 39105508  T
Q  100 g 100  Q
    |    
T  39105509 g 39105509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43215324 - 43215369
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgttttt 46  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||    
T  43215324 ataagctatttctataacaaaagataaataaagttaaattgctttt 43215369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 9202873 - 9202773
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||||| || ||||| ||||| |||||||||||||||||   ||| || || ||||||||| ||||| ||||||| |||| || |||||||||    
T  9202873 ataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaataa 9202774  T
Q  100 g 100  Q
    |    
T  9202773 g 9202773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 32372595 - 32372655
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 86  Q
    |||||||||| ||||||||||| ||||||||| ||||||||| | ||| ||||||||||||    
T  32372595 aaataaagttgaattgtttttgtatatgctataagctgttttcacaagttatcttggagaa 32372655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 32859818 - 32859770
Alignment:
Q  25 taaataaagttaaattgtttttgcatatgctattagctgttttaataag 73  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  32859818 taaataaagataaattgtttttgaatatgctataagctgttttaataag 32859770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 32861990 - 32861942
Alignment:
Q  25 taaataaagttaaattgtttttgcatatgctattagctgttttaataag 73  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  32861990 taaataaagataaattgtttttgaatatgctataagctgttttaataag 32861942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 32862774 - 32862726
Alignment:
Q  25 taaataaagttaaattgtttttgcatatgctattagctgttttaataag 73  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  32862774 taaataaagataaattgtttttgaatatgctataagctgttttaataag 32862726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 39594753 - 39594860
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||||||||  |||| || |||||||| ||||||||||| ||||| | | | ||||||||| |||||||||||||  ||| || |||||||||    
T  39594753 ataagctatttctatagaaaaagataaaataaag-taaattgttttcgcataagttgtaagctgttttcataagatatcttgttgaacttatgaaaataa 39594851  T
Q  100 gttgaaaac 108  Q
    | |||||||    
T  39594852 gctgaaaac 39594860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 29925786 - 29925893
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||| |||| ||||| ||||| ||  |||||||||||| || || |||||| || |||||  ||||| ||| |||||||| || |||||||||    
T  29925786 ataagctatttttatagcaaaagataaaatagcgttaaattgtttctgtatgtgctataagttgtttacataagctatattggagaacttatgaaaataa 29925885  T
Q  100 gttgaaaa 107  Q
    ||||||||    
T  29925886 gttgaaaa 29925893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16458103 - 16458005
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||||| |||| ||||| |||||  || |||||||||||||| ||||||||| || |||||| || || ||  |||||||| || |||||||||    
T  16458103 ataagctatttttatagcaaaagataaaataacttaaattgtttttgtatatgctataagttgtttttatgagctaaattggagaacttgtgaaaataa 16458005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 16937982 - 16937901
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||||| ||||||||||||||| ||||||||| || |||||| ||| | ||| |||||||| ||  ||||||||| ||||||    
T  16937982 aaataacgttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaa 16937901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 25461038 - 25461143
Alignment:
Q  2 taagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagt 101  Q
    |||||||||| | || ||||| ||||||||||||  |||||||||| ||||| ||| || |||||| ||||| | | |||||||| |  ||||||||||     
T  25461038 taagctatttttctagcaaaagataaataaagttgtattgtttttgtatatgttataagttgttttcataagctctattggagaactgatgaaaataagc 25461137  T
Q  102 tgaaaa 107  Q
    ||||||    
T  25461138 tgaaaa 25461143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34736651 - 34736566
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 86  Q
    |||||||||||||||| ||||| | |||||||| |||||| |||||| ||| ||||| | ||||| | || || ||||||||||||    
T  34736651 ataagctatttctatagcaaaagagaaataaagctaaattatttttgtataagctataaactgttatcattagctatcttggagaa 34736566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1619037 - 1619108
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataag 73  Q
    |||||||||||||| |||||||||| |||||||||||||| |||  | ||| ||||| ||||||||| |||||    
T  1619037 ataagctatttctaaaacaaaaaat-aataaagttaaattctttccgtataagctataagctgttttcataag 1619108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 10363696 - 10363740
Alignment:
Q  2 taagctatttctataacaaaaaat-aaataaagttaaattgtttt 45  Q
    ||||||||||||||||||||| || ||||||||||||||||||||    
T  10363696 taagctatttctataacaaaagataaaataaagttaaattgtttt 10363740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 23994802 - 23994734
Alignment:
Q  39 ttgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    ||||||||| ||||||||| |||| |||| | ||| ||||||| ||||||| | |||||||||||||||    
T  23994802 ttgtttttgtatatgctataagctattttcacaagctatcttgtagaaattataaaaataagttgaaaa 23994734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 465899 - 465946
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttg 47  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||    
T  465899 ataagctatttctatgacaaaagataaaataaagttaaattgtttttg 465946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 25461438 - 25461328
Alignment:
Q  3 aagctatttctataacaaaaaata-aataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagt 101  Q
    |||||||||| |||||||| | |  ||||||||||| ||||||||||||| ||||| | ||||||| ||||  |||||||| | | || ||||||||||     
T  25461438 aagctatttcaataacaaagagtgtaataaagttaa-ttgtttttgcataagctataaactgttttcataacctatcttggcgtatttatgaaaataagc 25461340  T
Q  102 tgaaaactgcta 113  Q
    ||||||| ||||    
T  25461339 tgaaaacagcta 25461328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25461771 - 25461668
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    ||||||||||| |||| ||||| |||||||  ||||||||| ||| | ||||| ||| || |||||| ||||| | | |||||||| || | ||||||||    
T  25461771 ataagctatttttatagcaaaagataaatatcgttaaattggtttagtatatgttataagttgtttttataagctctattggagaacttattaaaataag 25461672  T
Q  101 ttga 104  Q
    ||||    
T  25461671 ttga 25461668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 7984952 - 7985022
Alignment:
Q  39 ttgtttttgcatat-gctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    |||||||||||||  ||||| |||| |||| ||||| |||||||||||| || |||||||||| |||||||    
T  7984952 ttgtttttgcataaagctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaac 7985022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7319136 - 7319033
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattag---ctgttttaataagatatcttggagaaattttgaaaa 96  Q
    ||||||||||||||   ||||| ||||| |||||| |||||||||| || || |||||||    ||||||| ||||| |||||||||||| || ||||||    
T  7319136 ataagctatttctaacgcaaaatataaaataaagtgaaattgttttcgcttaagctattataaactgttttcataagctatcttggagaacttatgaaaa 7319037  T
Q  97 taag 100  Q
    ||||    
T  7319036 taag 7319033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10772003 - 10771961
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttt 45  Q
    |||||||||||||||||||||||||   |||||||||||||||||    
T  10772003 ataagctatttctataacaaaaaat--gtaaagttaaattgtttt 10771961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42583094 - 42583139
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttt 45  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||    
T  42583094 ataaggtatttctataacaaaagatgaaataaagttaaattgtttt 42583139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 4855646 - 4855686
Alignment:
Q  4 agctatttctataacaaaaaat-aaataaagttaaattgtt 43  Q
    |||||||| ||||||||||||| ||||||||||||||||||    
T  4855646 agctatttttataacaaaaaataaaataaagttaaattgtt 4855686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 6593252 - 6593351
Alignment:
Q  8 atttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaa 106  Q
    ||||||||||||||| || |||||||||||||||  || || ||| ||||| ||||||||| ||||| || ||| ||||  || |||||||||| |||||    
T  6593252 atttctataacaaaagataaaataaagttaaatt-attctgtataggctataagctgttttgataagctaccttagagagcttatgaaaataagctgaaa 6593350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7853603 - 7853647
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgttt 44  Q
    |||| ||||||||||||||||| || |||||||||||||||||||    
T  7853603 ataaactatttctataacaaaagataaaataaagttaaattgttt 7853647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 10639898 - 10639998
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||| ||||| || |||| || |||||||||||||| |||||  || || |||||  ||||  ||| |||||||| || |||||||||    
T  10639898 ataagctatttctatagcaaaagataaaattaaattaaattgtttttgtatatgtgatgagttgtttacataaactattttggagaacttatgaaaataa 10639997  T
Q  100 g 100  Q
    |    
T  10639998 g 10639998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12460125 - 12460081
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttt 45  Q
    |||||||||||||||||||||| |||||  |||||| ||||||||    
T  12460125 ataagctatttctataacaaaagataaaataagttatattgtttt 12460081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14714964 - 14714928
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaa 37  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  14714964 ataagctatttctataacaaaacataaacaaagttaa 14714928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33678725 - 33678833
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||| || | ||| ||||| ||||| ||||||||||| ||||||| | | ||||| ||||||||| ||||| ||||||||| || || |||||||||    
T  33678725 ataagctcttcccatagcaaaagataaagtaaagttaaatggtttttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaataa 33678824  T
Q  100 gttgaaaac 108  Q
    |||||||||    
T  33678825 gttgaaaac 33678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 46280369 - 46280290
Alignment:
Q  28 ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    ||||| |||||||||||||| ||||||||| ||||||||| ||||| ||| |||||||| || |||||||| | ||||||    
T  46280369 ataaatttaaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaa 46280290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 44821930 - 44822012
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    ||||||||| |||||||||||| ||| | ||| ||||||||| ||||| |||  ||||||| || ||||||||||||||||||    
T  44821930 aaataaagtcaaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaac 44822012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 37064586 - 37064482
Alignment:
Q  4 agctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagtt 102  Q
    ||||||||||||| | ||| || ||||| ||||||||||||||| |||||||||| |||||||||  |||| ||| || ||| | || |||||||||| |    
T  37064586 agctatttctatagccaaagatgaaatacagttaaattgtttttacatatgctataagctgttttcgtaagctattttagaggacttatgaaaataagct 37064487  T
Q  103 gaaaa 107  Q
    |||||    
T  37064486 gaaaa 37064482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 39279910 - 39280014
Alignment:
Q  4 agctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagtt 102  Q
    ||||||||||||  ||||| ||||| | |||||||||||||| || ||||| |||  |||| ||| ||||  |||||||||||| ||||||||||||| |    
T  39279910 agctatttctattgcaaaagataaaattaagttaaattgtttgtgtatatgttataggctgatttcataaattatcttggagaacttttgaaaataagct 39280009  T
Q  103 gaaaa 107  Q
    |||||    
T  39280010 gaaaa 39280014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 420305 - 420412
Alignment:
Q  1 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||||||| | |||| ||||| ||||| ||| ||| ||||||||||| ||||||||| || |||||   |||| ||| |||||||| || |||||||||    
T  420305 ataagctatgtttatagcaaaagataaaataatgttcaattgtttttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaataa 420404  T
Q  100 gttgaaaa 107  Q
    ||||||||    
T  420405 gttgaaaa 420412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 43648225 - 43648292
Alignment:
Q  40 tgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||||| | ||||| ||| ||||||||| ||||| ||||||||||||| | |||||||||||||||||    
T  43648225 tgttttcgtatatgatataagctgttttcataagctatcttggagaaaatatgaaaataagttgaaaa 43648292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 40252202 - 40252132
Alignment:
Q  30 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||||||| ||||||| ||||| ||| |||| |||| ||||| |||||||||||| || ||||||||||    
T  40252202 aaagttaaatcgtttttgtatatgttataagctcttttcataagttatcttggagaacttatgaaaataag 40252132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43153027 - 43152981
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgttttt 46  Q
    |||||||||||||||||||||| || |||||||||||||||||||||    
T  43153027 ataagctatttctataacaaaagataaaataaagttaaattgttttt 43152981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 17944442 - 17944361
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||||||||||||||||||||| ||||| | | || |||||| ||||| ||||||||| || || ||||| |||| ||||||    
T  17944442 aaataaagttaaattgtttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaaaa 17944361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 20269551 - 20269628
Alignment:
Q  30 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 107  Q
    |||||||||||||||||| | ||| ||| || ||||||| |||| | | |||||||| || |||||||||||||||||    
T  20269551 aaagttaaattgtttttgtaaatgttataagttgttttactaagctgtattggagaatttatgaaaataagttgaaaa 20269628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 43694667 - 43694595
Alignment:
Q  28 ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    ||||| |||||||||||||| ||||||||| ||||||||| ||||| ||| | | |||| || ||||||||||    
T  43694667 ataaatttaaattgtttttgtatatgctataagctgtttttataagctatatcgaagaacttatgaaaataag 43694595  T

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Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 47177581 - 47177681
Alignment:
Q  1 ataagctatttctataacaaaaaataaat-aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    ||||| |||||||||| ||||| | |||  ||||||||||||||||   ||| ||||| ||||||||| | ||| |||||||||||| || |||||||||    
T  47177581 ataaggtatttctatatcaaaatacaaaacaaagttaaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaataa 47177680  T
Q  100 g 100  Q
    |    
T  47177681 g 47177681  T

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Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 15309664 - 15309589
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagt 101  Q
    |||||||||||||||||||||| ||||| | | || |||||| ||||| ||| | |||||| || |||||||||||    
T  15309664 aaataaagttaaattgtttttgtatatgttttaagttgttttcataagttatttcggagaatttatgaaaataagt 15309589  T

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Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 34083644 - 34083577
Alignment:
Q  7 tatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataag 73  Q
    |||||||||| ||||| ||||| |||||||||||||||| || ||| ||||| ||||||||| |||||    
T  34083644 tatttctatagcaaaagataaaataaagttaaattgtttgtgtataagctataagctgttttcataag 34083577  T

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Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 39279708 - 39279791
Alignment:
Q  1 ataagctatttctataacaaaaaataaat-aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttgga 83  Q
    ||||||| |||||||| ||||| |||||  |||||||||||| ||||| |||| |||| ||||| ||| ||||| |||||||||    
T  39279708 ataagctgtttctatagcaaaagataaaacaaagttaaattgcttttgtatattctataagctggtttcataagttatcttgga 39279791  T

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Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 39907774 - 39907861
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaactgcta 113  Q
    |||||| ||||||||||||||| ||| ||||| | ||||||| ||||  |||||| ||||| |  |||||||||| ||||||| ||||    
T  39907774 aaataaggttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagcta 39907861  T

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Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 47130848 - 47130801
Alignment:
Q  62 tgttttaataagatatcttggagaaattttgaaaataagttgaaaact 109  Q
    |||||| ||||| |||||||||||| || |||||||||||||||||||    
T  47130848 tgttttcataagctatcttggagaacttgtgaaaataagttgaaaact 47130801  T

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Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 20526417 - 20526491
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    ||||||||||||||| | |||| | ||||||| ||||||||| ||||| ||| |||||||| |  ||||||||||    
T  20526417 aaataaagttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaataag 20526491  T

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Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 48507667 - 48507740
Alignment:
Q  2 taagctatttctataacaaaaaataa--ataaagttaaattgtttttgcatatgctattagctgttttaataag 73  Q
    |||||| |||||||| ||||| ||||  || ||||||||||||||||| ||||||||| | ||||||| |||||    
T  48507667 taagctgtttctatagcaaaagataagaatgaagttaaattgtttttgtatatgctataaactgttttcataag 48507740  T

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Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 49060485 - 49060531
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgttttt 46  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||    
T  49060485 ataagctatttctataacaaaaaataaaataaagtcaaattattttt 49060531  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4970913 - 4970819
Alignment:
Q  1 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||||||||||||||| ||||| |||||  ||    ||||||||||| ||||||||| || | |||| ||||||||| || ||||| || |||||||||    
T  4970913 ataagctatttctatagcaaaagataaaataa----aattgtttttgtatatgctataagttctttttataagatatattagagaacttatgaaaataa 4970819  T

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Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6824863 - 6824908
Alignment:
Q  1 ataagctatttctataacaaaaaata-aataaagttaaattgtttt 45  Q
    |||||||||||||||||||||| ||| || ||||||||||||||||    
T  6824863 ataagctatttctataacaaaagatagaacaaagttaaattgtttt 6824908  T

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Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 22283862 - 22283761
Alignment:
Q  7 tatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaa 106  Q
    |||||||||| |||| |  |||||||||||||||||||||| ||  ||||| | ||||||| ||||   ||||| ||||| || || ||||||| |||||    
T  22283862 tatttctatagcaaagataaaataaagttaaattgtttttgtatcagctataaactgttttcataaaccatcttagagaacttatggaaataagctgaaa 22283763  T
Q  107 ac 108  Q
    ||    
T  22283762 ac 22283761  T

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Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 45264066 - 45264107
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgtttt 67  Q
    |||||||||||||||||||||| ||||||||| |||| ||||    
T  45264066 aaataaagttaaattgtttttgtatatgctataagctatttt 45264107  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2767303 - 2767195
Alignment:
Q  1 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 99  Q
    |||| ||||||||||||||||| || |||||||  |||||||||||  |||| ||||| |||  || | || || |||||||| ||| || || ||||||    
T  2767303 ataatctatttctataacaaaagataaaataaatataaattgttttcacataagctatgagcgattctcatgagttatcttggtgaatttatggaaataa 2767204  T
Q  100 gttgaaaac 108  Q
    |||||||||    
T  2767203 gttgaaaac 2767195  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 17248499 - 17248598
Alignment:
Q  2 taagctatttctataacaaaaaataaataaa---gttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaata 98  Q
    ||||||||||||| | ||||| ||||| |||   ||||||||||||||| ||| ||||| |||| |||| |||||  ||||| ||||| || ||||||||    
T  17248499 taagctatttctagatcaaaagataaaaaaaaaagttaaattgtttttgtataagctataagctcttttcataag--atcttagagaacttatgaaaata 17248596  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 19022709 - 19022605
Alignment:
Q  2 taagctatttctataacaaaaaataaataaagtt-aaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||||||||||| | |||| |||||  || || ||||||||||   | ||||||| || |||||| ||||| ||| |||||||| || ||||||||||    
T  19022709 taagctatttctatcataaaagataaaagaactttaaattgttttaataaatgctataagttgtttttataagctatattggagaacttatgaaaataag 19022610  T
Q  101 ttgaa 105  Q
    |||||    
T  19022609 ttgaa 19022605  T

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Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 40689107 - 40689011
Alignment:
Q  5 gctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||||||||| ||||| ||||| |||||||||||| ||||   ||| ||||| |||||| || ||||| |||| |||| || || ||||||||||    
T  40689107 gctatttctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataag 40689011  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 44989743 - 44989703
Alignment:
Q  60 gctgttttaataagatatcttggagaaattttgaaaataag 100  Q
    |||||||| ||||||||||||| ||||||| ||||||||||    
T  44989743 gctgttttcataagatatcttgtagaaattatgaaaataag 44989703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 178424 - 178342
Alignment:
Q  26 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 108  Q
    ||||||||||||||| || | | ||| ||||||||||||||| | |||  ||||| ||||| || |||||||||| |||||||    
T  178424 aaataaagttaaattattgtcgtataagctattagctgttttcacaagccatctttgagaacttatgaaaataagctgaaaac 178342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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