View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8172_low_25 (Length: 345)
Name: NF8172_low_25
Description: NF8172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8172_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 14 - 326
Target Start/End: Complemental strand, 31479510 - 31479198
Alignment:
| Q |
14 |
taatactatggtacaagtaatctcaatgcacttcacctcccctattgatcccactcataaacattcataactaattgcttttgagaatggtataacgtta |
113 |
Q |
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| T |
31479510 |
taatactatggtacaagtaatctcaatgcacttcacctcccctattgatcccactcataaacattcataactaattgcttttgagaatggtataacgtta |
31479411 |
T |
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| Q |
114 |
ttaataaatctcatataacaatttcaatgtattgaatttgatagctgactgatatcaattttgatcaatgtcttagggtgacatattttcttcaattcat |
213 |
Q |
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| T |
31479410 |
ttaataaatctcatataccaatttcaatgtattgaatttgatagctgactgatatcaattttgatcaatgtcttagggtgacatattttcttcaattcat |
31479311 |
T |
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| Q |
214 |
tacttatttagcacttatttctctcattttgataaaagaaatttgatcatcgaccagattcattaataacaataaattaggggtagttgaaaattaaaaa |
313 |
Q |
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| T |
31479310 |
tacttatttagcacttatttctctcattttgataaaagaaatttgatcatcgaccagattcattaataacaataaattaggggtagttgaaaattaaaaa |
31479211 |
T |
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| Q |
314 |
gagaggactataa |
326 |
Q |
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| T |
31479210 |
gagaggactataa |
31479198 |
T |
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