View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8173_high_12 (Length: 238)
Name: NF8173_high_12
Description: NF8173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8173_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 39940482 - 39940704
Alignment:
| Q |
1 |
tattatttgattttgacataaataatgaaaaattgtactataaagtaatttgatttctttgatcttaacattaatataagcattttgtctcaagaaattg |
100 |
Q |
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| T |
39940482 |
tattatttgattttgacataaataatgaaaaattgtactataaagcaatttgatttctttgatcttaacattaatataagcattttgtctcaagaaattg |
39940581 |
T |
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| Q |
101 |
acaaatacatgcatagcaaatagcaataatgtaacgcaaaaataaatgatctgttttggagtaaggtatattgctccttatggaggatgttttgctatat |
200 |
Q |
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| T |
39940582 |
acaaatacatgcatagcaaatagcaataatgtaatgcaaaaataaaggatctgttttggagtaaggtatattgctccttatggaggatgttttgctatat |
39940681 |
T |
|
| Q |
201 |
tgctttgcacaaaaggttacctt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
39940682 |
tgctttgcacaaaaggttacctt |
39940704 |
T |
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