View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8173_high_9 (Length: 250)
Name: NF8173_high_9
Description: NF8173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8173_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 39940377 - 39940133
Alignment:
| Q |
1 |
cgaataactcttttcctattattcatacattttctggcaaactttgatgtttgtgttaccttaatgtcatggaccatgcctttgtaattaccatgcttaa |
100 |
Q |
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| T |
39940377 |
cgaataactcttttcctattattcatacattttctggcaaactttgatgtttgtgttaccttaatgtcatggaccatgactttgtaattaccatgcttaa |
39940278 |
T |
|
| Q |
101 |
tgacattgcttgagcaacaaggatctctaataatatgattacttttattcttataactaaaatttctactaatttcaacttgagaacgacccctcttagg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
39940277 |
tgacattgcttgagcaacaaggatctctaataatatgattacttttattcttataactaaaatttctactaatttcaacttgagcacgacccctcttagg |
39940178 |
T |
|
| Q |
201 |
cttcaaagacttccttaagtggtggcctttatagtctctgcttct |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
39940177 |
cttcaaagacttccttaagtggtggcctttatagtctctccttct |
39940133 |
T |
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