View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8175_high_33 (Length: 347)
Name: NF8175_high_33
Description: NF8175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8175_high_33 |
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Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 7 - 332
Target Start/End: Original strand, 29989606 - 29989930
Alignment:
| Q |
7 |
agacaaataatattagacagaataattagattgaagttttccgctaaaacaaagacctttattaacgacataatctcaatgtctaattaagtgggatttg |
106 |
Q |
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| T |
29989606 |
agacaaataatattagacaaaataattagattgaagttttccgctaaaacaaagacctttattaacgacacaatctcaatgtctaattaagtgggatttg |
29989705 |
T |
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| Q |
107 |
accctagtgagagatgcctatgattaatgtatcacgttccagttatttgttaagccttgactgaacaaccatagaattgtccattcacttttcttctctt |
206 |
Q |
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| T |
29989706 |
accctagtgagagatgcctatgat-aatgtatcacgttccagttatttgttaagccttgactgaacaaccatagaattgtccattcacttttcttctctt |
29989804 |
T |
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| Q |
207 |
aatcctctagttttctcttcagaatgacacgttttcttttagcaattgatattattccattgatttacatatagaaagcatggtcgtggatatcaattat |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29989805 |
aatcctctagttttctcttcagaatgacacgttttcttttagcaattgatattattccattgatttacatatagaaagcatggtcgtggatatcaattat |
29989904 |
T |
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| Q |
307 |
cataggtaggcaactaaggccatttt |
332 |
Q |
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|||||||||||||||||||||||||| |
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| T |
29989905 |
cataggtaggcaactaaggccatttt |
29989930 |
T |
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