View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8175_high_35 (Length: 341)

Name: NF8175_high_35
Description: NF8175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8175_high_35
NF8175_high_35
[»] chr6 (36 HSPs)
chr6 (1-322)||(5554741-5555062)
chr6 (152-202)||(24836295-24836345)
chr6 (151-201)||(33116528-33116578)
chr6 (153-205)||(31668778-31668830)
chr6 (146-202)||(32975896-32975952)
chr6 (146-202)||(33068657-33068713)
chr6 (153-204)||(2023723-2023774)
chr6 (166-200)||(34544548-34544582)
chr6 (153-201)||(4247731-4247779)
chr6 (170-202)||(31672012-31672044)
chr6 (164-200)||(33500579-33500615)
chr6 (167-202)||(507159-507194)
chr6 (167-202)||(9559637-9559672)
chr6 (131-202)||(27889939-27890010)
chr6 (158-201)||(31461608-31461651)
chr6 (127-201)||(10400168-10400241)
chr6 (153-202)||(1810396-1810445)
chr6 (153-202)||(2514627-2514676)
chr6 (153-202)||(4325404-4325453)
chr6 (153-202)||(5328899-5328948)
chr6 (153-202)||(5884954-5885003)
chr6 (154-199)||(6647315-6647360)
chr6 (167-204)||(6654554-6654591)
chr6 (153-202)||(8349760-8349809)
chr6 (153-202)||(10452456-10452505)
chr6 (167-200)||(10836760-10836793)
chr6 (153-202)||(31670971-31671020)
chr6 (170-202)||(2206532-2206564)
chr6 (157-189)||(2548316-2548348)
chr6 (146-202)||(4248876-4248932)
chr6 (166-202)||(4420555-4420591)
chr6 (170-202)||(28531637-28531669)
chr6 (170-202)||(31624200-31624232)
chr6 (157-201)||(32843412-32843456)
chr6 (156-204)||(32861356-32861404)
chr6 (156-200)||(33259744-33259788)
[»] chr2 (34 HSPs)
chr2 (130-202)||(10150657-10150729)
chr2 (127-202)||(17952797-17952872)
chr2 (167-204)||(10143111-10143148)
chr2 (154-202)||(38239647-38239695)
chr2 (148-200)||(43431542-43431594)
chr2 (155-202)||(13864577-13864624)
chr2 (152-202)||(31461362-31461412)
chr2 (153-202)||(9478224-9478273)
chr2 (153-202)||(28803602-28803651)
chr2 (146-202)||(44606184-44606240)
chr2 (155-202)||(3673734-3673781)
chr2 (163-202)||(5045253-5045292)
chr2 (167-202)||(5133711-5133746)
chr2 (163-202)||(15173461-15173500)
chr2 (127-194)||(15866772-15866839)
chr2 (167-202)||(24141745-24141780)
chr2 (172-202)||(1939428-1939458)
chr2 (154-196)||(9875559-9875601)
chr2 (158-200)||(15171180-15171222)
chr2 (167-201)||(41033047-41033081)
chr2 (153-202)||(3423864-3423913)
chr2 (153-202)||(14209202-14209251)
chr2 (153-198)||(33197339-33197384)
chr2 (153-202)||(40672892-40672941)
chr2 (168-201)||(41022176-41022209)
chr2 (153-202)||(42817472-42817521)
chr2 (153-193)||(2400081-2400121)
chr2 (153-209)||(6926530-6926586)
chr2 (157-201)||(11344381-11344425)
chr2 (155-199)||(13630380-13630424)
chr2 (151-211)||(21356296-21356356)
chr2 (146-202)||(32694131-32694186)
chr2 (170-202)||(39567845-39567877)
chr2 (170-202)||(43199356-43199388)
[»] chr4 (36 HSPs)
chr4 (127-198)||(19422317-19422388)
chr4 (147-202)||(35743223-35743278)
chr4 (153-201)||(4191664-4191712)
chr4 (127-202)||(969441-969516)
chr4 (155-202)||(47970245-47970292)
chr4 (163-202)||(51044555-51044594)
chr4 (157-202)||(24936239-24936284)
chr4 (157-202)||(28623218-28623263)
chr4 (153-202)||(30024625-30024674)
chr4 (165-202)||(52645845-52645882)
chr4 (166-202)||(3176218-3176254)
chr4 (129-201)||(11158453-11158525)
chr4 (140-188)||(27321941-27321989)
chr4 (154-202)||(29601104-29601152)
chr4 (165-201)||(44119259-44119295)
chr4 (167-202)||(6364088-6364123)
chr4 (163-202)||(42641729-42641768)
chr4 (140-202)||(30207666-30207728)
chr4 (167-201)||(44249225-44249259)
chr4 (148-202)||(49219059-49219113)
chr4 (168-202)||(49803151-49803185)
chr4 (134-200)||(53155171-53155236)
chr4 (153-194)||(2980575-2980616)
chr4 (153-202)||(4663792-4663841)
chr4 (153-202)||(8422933-8422982)
chr4 (153-198)||(9319295-9319340)
chr4 (169-202)||(23815311-23815344)
chr4 (153-202)||(41050621-41050670)
chr4 (153-202)||(51555963-51556012)
chr4 (146-202)||(485999-486055)
chr4 (146-202)||(3249810-3249866)
chr4 (158-202)||(20907103-20907147)
chr4 (163-199)||(21683578-21683614)
chr4 (153-193)||(23819015-23819055)
chr4 (131-199)||(24160594-24160662)
chr4 (154-194)||(54986348-54986388)
[»] chr5 (31 HSPs)
chr5 (127-201)||(36638645-36638719)
chr5 (140-202)||(29117026-29117088)
chr5 (156-202)||(35135758-35135804)
chr5 (127-200)||(40499773-40499846)
chr5 (146-202)||(26516216-26516272)
chr5 (153-200)||(38033893-38033940)
chr5 (154-200)||(18704133-18704179)
chr5 (153-202)||(13224354-13224403)
chr5 (153-202)||(20982231-20982280)
chr5 (153-202)||(40097499-40097548)
chr5 (167-203)||(1773520-1773556)
chr5 (154-202)||(7096223-7096271)
chr5 (153-208)||(10391278-10391333)
chr5 (167-202)||(12407757-12407792)
chr5 (167-202)||(12460096-12460131)
chr5 (167-202)||(33459031-33459066)
chr5 (167-202)||(34117629-34117664)
chr5 (167-202)||(40048376-40048411)
chr5 (153-199)||(4991042-4991088)
chr5 (153-202)||(912745-912794)
chr5 (153-202)||(6739797-6739846)
chr5 (167-200)||(8089242-8089275)
chr5 (163-204)||(9927520-9927561)
chr5 (153-202)||(28586862-28586911)
chr5 (157-202)||(29588809-29588854)
chr5 (141-202)||(35095879-35095940)
chr5 (157-202)||(39128568-39128613)
chr5 (172-204)||(11714960-11714992)
chr5 (158-202)||(27106019-27106063)
chr5 (146-202)||(38766939-38766995)
chr5 (153-201)||(38819672-38819720)
[»] chr1 (41 HSPs)
chr1 (127-200)||(4202227-4202300)
chr1 (130-202)||(33339516-33339588)
chr1 (153-202)||(16982032-16982081)
chr1 (163-202)||(15360829-15360868)
chr1 (163-202)||(27140420-27140459)
chr1 (146-204)||(870963-871021)
chr1 (164-202)||(49517006-49517044)
chr1 (153-202)||(4200154-4200203)
chr1 (155-200)||(13037791-13037836)
chr1 (153-202)||(23895261-23895310)
chr1 (127-200)||(29046011-29046084)
chr1 (153-202)||(49557066-49557115)
chr1 (130-202)||(11218178-11218250)
chr1 (151-202)||(1662497-1662548)
chr1 (159-198)||(4256142-4256181)
chr1 (153-204)||(15437888-15437939)
chr1 (167-202)||(36641814-36641849)
chr1 (163-202)||(37593765-37593804)
chr1 (127-202)||(41638406-41638481)
chr1 (167-202)||(50319231-50319266)
chr1 (127-202)||(52286577-52286652)
chr1 (155-209)||(29794011-29794065)
chr1 (167-201)||(37818403-37818437)
chr1 (164-202)||(48830172-48830210)
chr1 (153-202)||(6659628-6659677)
chr1 (157-198)||(26679203-26679244)
chr1 (153-202)||(44032095-44032144)
chr1 (129-202)||(47002970-47003043)
chr1 (167-199)||(172676-172708)
chr1 (167-199)||(6976887-6976919)
chr1 (174-202)||(14737801-14737829)
chr1 (155-195)||(17269177-17269217)
chr1 (164-192)||(20713592-20713620)
chr1 (167-195)||(24146362-24146390)
chr1 (166-202)||(25707098-25707134)
chr1 (127-202)||(30815731-30815807)
chr1 (166-202)||(36151601-36151637)
chr1 (154-202)||(43333625-43333673)
chr1 (153-205)||(46504310-46504362)
chr1 (153-201)||(50998477-50998525)
chr1 (153-189)||(52190063-52190099)
[»] scaffold0508 (1 HSPs)
scaffold0508 (153-204)||(9869-9920)
[»] scaffold0590 (1 HSPs)
scaffold0590 (153-202)||(1170-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (153-202)||(2756-2805)
[»] scaffold0100 (1 HSPs)
scaffold0100 (153-202)||(42542-42591)
[»] chr8 (31 HSPs)
chr8 (141-202)||(2699219-2699280)
chr8 (163-200)||(9928191-9928228)
chr8 (153-202)||(40728514-40728563)
chr8 (156-204)||(43812452-43812500)
chr8 (163-202)||(32506992-32507031)
chr8 (164-202)||(10939343-10939381)
chr8 (156-202)||(11188251-11188297)
chr8 (153-202)||(14482127-14482176)
chr8 (153-202)||(29699179-29699228)
chr8 (153-201)||(1433470-1433518)
chr8 (156-196)||(10062229-10062269)
chr8 (146-202)||(31884512-31884568)
chr8 (163-202)||(3945209-3945248)
chr8 (163-202)||(4558733-4558772)
chr8 (167-202)||(26215435-26215470)
chr8 (171-202)||(26820142-26820173)
chr8 (153-204)||(29170034-29170085)
chr8 (147-202)||(38561645-38561700)
chr8 (147-202)||(40280301-40280356)
chr8 (167-202)||(42597340-42597375)
chr8 (153-202)||(26813900-26813950)
chr8 (167-200)||(1561218-1561251)
chr8 (153-202)||(5226527-5226576)
chr8 (153-202)||(34563175-34563224)
chr8 (153-202)||(35298574-35298623)
chr8 (153-202)||(38874571-38874620)
chr8 (153-202)||(39392757-39392806)
chr8 (127-200)||(42370459-42370532)
chr8 (158-202)||(26056015-26056059)
chr8 (172-200)||(33522430-33522458)
chr8 (146-198)||(36643971-36644023)
[»] chr7 (49 HSPs)
chr7 (153-202)||(44241785-44241834)
chr7 (146-202)||(30496622-30496678)
chr7 (167-202)||(1432063-1432098)
chr7 (153-200)||(2223073-2223120)
chr7 (154-209)||(33894549-33894604)
chr7 (163-202)||(35809000-35809039)
chr7 (128-202)||(10079436-10079510)
chr7 (157-202)||(4591471-4591516)
chr7 (153-202)||(6552366-6552415)
chr7 (153-202)||(49060465-49060514)
chr7 (153-201)||(7244627-7244675)
chr7 (154-202)||(24973870-24973918)
chr7 (157-201)||(27481391-27481435)
chr7 (167-202)||(2013138-2013173)
chr7 (155-202)||(3610836-3610883)
chr7 (167-202)||(28165030-28165065)
chr7 (166-201)||(28702698-28702733)
chr7 (163-197)||(25507286-25507320)
chr7 (163-197)||(25558290-25558324)
chr7 (163-197)||(25558488-25558522)
chr7 (132-202)||(35536011-35536081)
chr7 (172-202)||(39591563-39591593)
chr7 (152-202)||(46213727-46213777)
chr7 (158-200)||(46223170-46223212)
chr7 (153-202)||(991177-991226)
chr7 (153-202)||(991995-992044)
chr7 (153-202)||(1431404-1431453)
chr7 (163-200)||(2894752-2894789)
chr7 (169-202)||(3968291-3968324)
chr7 (153-202)||(5373150-5373199)
chr7 (153-202)||(22759111-22759160)
chr7 (153-202)||(25511552-25511601)
chr7 (169-202)||(25600691-25600724)
chr7 (169-202)||(28178910-28178943)
chr7 (171-204)||(30535506-30535539)
chr7 (153-198)||(39551648-39551693)
chr7 (153-202)||(47004012-47004061)
chr7 (153-202)||(47395194-47395243)
chr7 (165-202)||(48157216-48157253)
chr7 (158-202)||(1417194-1417238)
chr7 (164-204)||(5272914-5272954)
chr7 (127-199)||(5276123-5276195)
chr7 (158-202)||(21853212-21853256)
chr7 (153-201)||(22388001-22388049)
chr7 (153-189)||(27389308-27389344)
chr7 (147-195)||(27492714-27492762)
chr7 (146-202)||(31341112-31341168)
chr7 (166-202)||(35007542-35007578)
chr7 (170-202)||(43152998-43153030)
[»] chr3 (46 HSPs)
chr3 (153-202)||(16790184-16790233)
chr3 (163-202)||(24605112-24605151)
chr3 (169-204)||(36887463-36887498)
chr3 (147-202)||(37788780-37788834)
chr3 (127-202)||(41159008-41159083)
chr3 (157-207)||(20173979-20174029)
chr3 (165-202)||(2128347-2128384)
chr3 (127-200)||(25185892-25185965)
chr3 (129-202)||(25964343-25964416)
chr3 (153-202)||(38462206-38462255)
chr3 (153-202)||(39971244-39971293)
chr3 (153-202)||(41028947-41028996)
chr3 (153-202)||(43116524-43116573)
chr3 (172-204)||(32095285-32095317)
chr3 (164-200)||(32663578-32663614)
chr3 (153-200)||(28283675-28283722)
chr3 (127-202)||(36193613-36193687)
chr3 (139-194)||(44488795-44488850)
chr3 (167-202)||(48364975-48365010)
chr3 (127-202)||(48528477-48528552)
chr3 (152-202)||(905066-905116)
chr3 (168-202)||(1395611-1395645)
chr3 (174-204)||(23952200-23952230)
chr3 (127-193)||(24158607-24158673)
chr3 (164-202)||(30669066-30669104)
chr3 (164-202)||(39743841-39743879)
chr3 (153-202)||(2153607-2153656)
chr3 (153-202)||(3182458-3182507)
chr3 (173-202)||(10101572-10101601)
chr3 (173-202)||(10212497-10212526)
chr3 (173-202)||(10357378-10357407)
chr3 (153-202)||(16790452-16790501)
chr3 (172-209)||(20143869-20143906)
chr3 (172-209)||(23269283-23269320)
chr3 (170-199)||(24235782-24235811)
chr3 (153-202)||(27792797-27792846)
chr3 (153-202)||(32703063-32703112)
chr3 (169-202)||(33882969-33883002)
chr3 (153-202)||(36445657-36445706)
chr3 (153-202)||(36519124-36519173)
chr3 (169-202)||(42809242-42809275)
chr3 (153-202)||(44374740-44374789)
chr3 (153-202)||(54775053-54775102)
chr3 (167-199)||(23815992-23816024)
chr3 (154-190)||(24624145-24624181)
chr3 (162-202)||(48872276-48872316)
[»] scaffold0654 (1 HSPs)
scaffold0654 (127-200)||(6735-6809)
[»] scaffold0014 (1 HSPs)
scaffold0014 (127-200)||(116654-116728)
[»] scaffold0024 (1 HSPs)
scaffold0024 (153-202)||(27501-27550)
[»] scaffold0019 (1 HSPs)
scaffold0019 (167-202)||(104230-104265)
[»] scaffold0091 (1 HSPs)
scaffold0091 (153-202)||(5944-5993)


Alignment Details
Target: chr6 (Bit Score: 294; Significance: 1e-165; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 5555062 - 5554741
Alignment:
Q  1 attgcactagatcaatatcttgaagaacaaaaatcgataaacaagactcaaatattgcatggctcatttcaacttttcattgcttataagtgtttatcga 100  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||    
T  5555062 attgcacgaggtcaatatcttgaagaacaaaaatcgataaacaagactcaaatattgcatggctcatttcaacttttcgttccttataagtgtttctcga 5554963  T
Q  101 aaagtttatccctactaaggttacgattggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5554962 aaagtttatccctactaaggttacgattggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaa 5554863  T
Q  201 attagtcaattcaaagaggcactaactctatctcctatatatgattatgcattttttatttatcaggcgacggtaacaatccacaatttccaaatgtttc 300  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5554862 attagtcaattcaaagaggcgctaactctatctcctgtatatgattatgcattttttatttatcaggcgacggtaacaatccacaatttccaaatgtttc 5554763  T
Q  301 gacacataatgaatccgggatg 322  Q
    ||||||||||||||||||||||    
T  5554762 gacacataatgaatccgggatg 5554741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 24836345 - 24836295
Alignment:
Q  152 atatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| ||||| || |||||||||||||||||||||||||||||||||||||    
T  24836345 atattatataagtatttatgtataagttatttctataacaaaagataaaat 24836295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 33116528 - 33116578
Alignment:
Q  151 catatcatatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  33116528 catataatataagtgtttatgtataagttatttctttaacaaaagataaaa 33116578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 31668830 - 31668778
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaattag 205  Q
    ||||||||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  31668830 tatcatataagtgcttatgtataagctatttctataacaaaacataaaattag 31668778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 32975896 - 32975952
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| | ||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  32975896 aagcgcttctcatataagtgtttatgtataagttatttctgtaacaaaatataaaat 32975952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 33068713 - 33068657
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| ||||| |||  || ||||||||||||||||||||||||||||||||||||    
T  33068713 aagcgcttatcaaataaatgcttatgtataagttatttctataacaaaagataaaat 33068657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 2023774 - 2023723
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaatta 204  Q
    ||||||||| ||||| || ||||||||||||||||| |||||||||||||||    
T  2023774 tatcatataagtgttcatatataagttatttctatagcaaaagataaaatta 2023723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 200
Target Start/End: Complemental strand, 34544582 - 34544548
Alignment:
Q  166 tttatgtataagttatttctataacaaaagataaa 200  Q
    |||||||||||||||||||||||||||||||||||    
T  34544582 tttatgtataagttatttctataacaaaagataaa 34544548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 4247779 - 4247731
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    |||||| || ||| ||||||||||| |||||||||||||||||||||||    
T  4247779 tatcatgtaagtgcttatgtataagctatttctataacaaaagataaaa 4247731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 31672012 - 31672044
Alignment:
Q  170 tgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||||||||||||||||    
T  31672012 tgtataagttatttctataacaaaagataaaat 31672044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 33500615 - 33500579
Alignment:
Q  164 tgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||||||||||||| ||||||||||||||||||||||    
T  33500615 tgtttatgtataagctatttctataacaaaagataaa 33500579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 507159 - 507194
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||| |||||||||||||||||||||||||    
T  507159 ttatgtataaattatttctataacaaaagataaaat 507194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 9559672 - 9559637
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||||| |||||||||||||    
T  9559672 ttatgtataagttatttctatagcaaaagataaaat 9559637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 27890010 - 27889939
Alignment:
Q  131 ataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||| ||||| ||||   ||||||||  ||| ||||||| |||||||||||||||||| |||||||||    
T  27890010 ataaacaacttaattaagcatttatcatatgagtgcttatgtacaagttatttctataacaacagataaaat 27889939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 31461608 - 31461651
Alignment:
Q  158 tatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||    
T  31461608 tataagtgcttatgtataagctatttctataacaaaagataaaa 31461651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 10400168 - 10400241
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    ||||||||||||  |||| ||| || |||||||||  |||||||||||||| ||||| ||||| |||||||||||    
T  10400168 ttggataaacaacataattaagggcttatcatataaatgtttatgtataagctattt-tataataaaagataaaa 10400241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 1810445 - 1810396
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||| | ||| ||||||||||||||||||||||||    
T  1810445 tatcatataagtgcttatgcaaaagctatttctataacaaaagataaaat 1810396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 2514627 - 2514676
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| || ||| ||||||||||| ||||||||||| ||||||||||||    
T  2514627 tatcatgtaagtgcttatgtataagctatttctataataaaagataaaat 2514676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 4325453 - 4325404
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| |||||| |||||||||||||||| ||| ||||||||    
T  4325453 tatcatataagtgcttatgtctaagttatttctataataaatgataaaat 4325404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 5328899 - 5328948
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||| | ||| ||| || |||||||||||||||||||||||||||||    
T  5328899 tatcataaaagtgcttacgtttaagttatttctataacaaaagataaaat 5328948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 5885003 - 5884954
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| |||  ||||||||| ||||||||||||||||| |||||||    
T  5885003 tatcatataagtgcatatgtataaattatttctataacaaaaaataaaat 5884954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 6647315 - 6647360
Alignment:
Q  154 atcatatacgtgtttatgtataagttatttctataacaaaagataa 199  Q
    |||||||  ||| |||||||||||||||||||||||||||| ||||    
T  6647315 atcatatgagtgcttatgtataagttatttctataacaaaaaataa 6647360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 6654554 - 6654591
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaatta 204  Q
    |||||||||||||||||||||||||||  |||||||||    
T  6654554 ttatgtataagttatttctataacaaataataaaatta 6654591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 8349809 - 8349760
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| |||||| |||||||  ||||||| ||||||||||||||||    
T  8349809 tatcatataagtgtttgtgtataaactatttctctaacaaaagataaaat 8349760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 10452505 - 10452456
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||  ||| ||||||||||| |||||||||||||||| |||||||    
T  10452505 tatcatatcagtgcttatgtataagctatttctataacaaaatataaaat 10452456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 10836760 - 10836793
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaa 200  Q
    ||||||||||||||| ||||||||||||||||||    
T  10836760 ttatgtataagttatatctataacaaaagataaa 10836793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 31671020 - 31670971
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| |||| ||||||| ||||||||||||| |||||||||    
T  31671020 tatcatataagtgcttatatataagtcatttctataacaatagataaaat 31670971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 2206532 - 2206564
Alignment:
Q  170 tgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||| ||||||||||||||||||    
T  2206532 tgtataagttatttttataacaaaagataaaat 2206564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 189
Target Start/End: Complemental strand, 2548348 - 2548316
Alignment:
Q  157 atatacgtgtttatgtataagttatttctataa 189  Q
    ||||| |||||||||||||||||||||||||||    
T  2548348 atataagtgtttatgtataagttatttctataa 2548316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 4248876 - 4248932
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| | ||||||| ||| |||| |||||| |||||| |||||||||||||||||    
T  4248876 aagcgcttgtcatataagtgcttatatataagctatttcaataacaaaagataaaat 4248932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 4420555 - 4420591
Alignment:
Q  166 tttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||| || |||||||||||||||||||||    
T  4420555 tttatgtataagctacttctataacaaaagataaaat 4420591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 28531669 - 28531637
Alignment:
Q  170 tgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||| ||||||||||||||||||    
T  28531669 tgtataagttatttatataacaaaagataaaat 28531637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 31624200 - 31624232
Alignment:
Q  170 tgtataagttatttctataacaaaagataaaat 202  Q
    |||||||| ||||||||||||||||||||||||    
T  31624200 tgtataagctatttctataacaaaagataaaat 31624232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 32843456 - 32843412
Alignment:
Q  157 atatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    ||||| ||| ||||||||||||||||||||||| || ||||||||    
T  32843456 atataagtgcttatgtataagttatttctataataagagataaaa 32843412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 32861356 - 32861404
Alignment:
Q  156 catatacgtgtttatgtataagttatttctataacaaaagataaaatta 204  Q
    |||||| ||| ||||| ||| | ||||||||||||||||||||||||||    
T  32861356 catataagtgcttatggatacgctatttctataacaaaagataaaatta 32861404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 33259744 - 33259788
Alignment:
Q  156 catatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||||| ||| ||||||||||| ||||| ||||||||||||||||    
T  33259744 catataagtgcttatgtataagctatttttataacaaaagataaa 33259788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 10150657 - 10150729
Alignment:
Q  130 gataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||||| |||| | ||| ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  10150657 gataaacaacttaattaagcacttattatataagtgtttatgtataagttatttctataataaaagataaaat 10150729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 17952872 - 17952797
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| |||| ||||||||||||| | ||||||||| | | |||| |||||| ||||||||||||||||||||||||    
T  17952872 ttggttaaaaaatttaataaagcacttatcatataagagcttatatataagctatttctataacaaaagataaaat 17952797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 10143111 - 10143148
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaatta 204  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10143111 ttatgtataagttatttctataacaaaagataaaatta 10143148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 38239695 - 38239647
Alignment:
Q  154 atcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  38239695 atcatgtaagtgtttatgtataagctatttctataacaaaagataaaat 38239647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 43431594 - 43431542
Alignment:
Q  148 gcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||| ||||||||| ||||| |||||||||||||||| |||||||||||||||    
T  43431594 gcgcttatcatataagtgttaatgtataagttatttcaataacaaaagataaa 43431542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 13864577 - 13864624
Alignment:
Q  155 tcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||| ||||||||||||||| ||||||||||||||||| ||||||    
T  13864577 tcatataagtgtttatgtataagctatttctataacaaaaggtaaaat 13864624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 31461362 - 31461412
Alignment:
Q  152 atatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||| ||| |||| |||||| ||||||||||||||||||||||||    
T  31461362 atatcatataagtggttatatataagctatttctataacaaaagataaaat 31461412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 9478224 - 9478273
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||||||||||||||| |||||||||||||  |||||||||    
T  9478224 tatcatataagtgtttatgtataagctatttctataacagtagataaaat 9478273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 28803651 - 28803602
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| |||| ||||||||||||| |||||||||||||||||    
T  28803651 tatcatataagtgcttatatataagttatttcgataacaaaagataaaat 28803602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 44606240 - 44606184
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| ||| ||||| ||||||||||||||| |||||  |||||||||||||||||    
T  44606240 aagcgcttattatataagtgtttatgtataagctattttcataacaaaagataaaat 44606184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 3673734 - 3673781
Alignment:
Q  155 tcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||| ||| |||||||| ||||||||||||||||||| |||||||    
T  3673734 tcatataagtgcttatgtattagttatttctataacaaaatataaaat 3673781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 5045292 - 5045253
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  5045292 gtgtttatgtataagctatttttataacaaaagataaaat 5045253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 5133711 - 5133746
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||| ||||||||||||||||||||||||    
T  5133711 ttatgtataagctatttctataacaaaagataaaat 5133746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 15173461 - 15173500
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| |||||||||||||||||||||||||||||| ||||    
T  15173461 gtgtctatgtataagttatttctataacaaaagatgaaat 15173500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 15866839 - 15866772
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaa 194  Q
    ||||||||||| |||||| ||| || ||||||| | |||||| |||||||||||||| | ||||||||    
T  15866839 ttggataaacattttaattaagtgcttatcatacaagtgtttgtgtataagttatttttgtaacaaaa 15866772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 24141780 - 24141745
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||||||||| ||||||||||||||    
T  24141780 ttatgtataagttatttctatcacaaaagataaaat 24141745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 1939458 - 1939428
Alignment:
Q  172 tataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||||||||||||||    
T  1939458 tataagttatttctataacaaaagataaaat 1939428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 9875601 - 9875559
Alignment:
Q  154 atcatatacgtgtttatgtataagttatttctataacaaaaga 196  Q
    |||||||  |||||||||||||||||||||||||| |||||||    
T  9875601 atcatatgagtgtttatgtataagttatttctatagcaaaaga 9875559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 200
Target Start/End: Original strand, 15171180 - 15171222
Alignment:
Q  158 tatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||    
T  15171180 tataagtgtttatgtataagttttttctataacagaagataaa 15171222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 41033081 - 41033047
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaa 201  Q
    ||||||||||| |||||||||||||||||||||||    
T  41033081 ttatgtataagctatttctataacaaaagataaaa 41033047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 3423913 - 3423864
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||| | ||||||||||||||||||||| | || |||||||||||||    
T  3423913 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaat 3423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 14209202 - 14209251
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| |||||| ||| |||| |||||| |||||||||||||||||    
T  14209202 tatcatataagtgtttctgtctaagctatttcaataacaaaagataaaat 14209251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 33197384 - 33197339
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagata 198  Q
    ||||||||| ||| |||| |||||| ||||||||||||||||||||    
T  33197384 tatcatataagtgcttatctataagctatttctataacaaaagata 33197339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 40672941 - 40672892
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| || || |||||||||||||||||||||| | ||||||||||||    
T  40672941 tatcatttaagtttttatgtataagttatttctatgaaaaaagataaaat 40672892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 41022176 - 41022209
Alignment:
Q  168 tatgtataagttatttctataacaaaagataaaa 201  Q
    ||||||||||||||||| ||||||||||||||||    
T  41022176 tatgtataagttatttcaataacaaaagataaaa 41022209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 42817521 - 42817472
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||||| || |||| |||||||||||| |||||||||||||    
T  42817521 tatcatataagtgttgatttatatgttatttctataccaaaagataaaat 42817472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 2400081 - 2400121
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaa 193  Q
    ||||||||| ||| ||||||||||||| |||||||||||||    
T  2400081 tatcatataagtgcttatgtataagttgtttctataacaaa 2400121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 6926586 - 6926530
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaattagtcaa 209  Q
    |||||||||  ||||||||||||||| |||| || || |||||||||||| ||||||    
T  6926586 tatcatataaatgtttatgtataagtcatttgtacaagaaaagataaaataagtcaa 6926530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 11344425 - 11344381
Alignment:
Q  157 atatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    ||||| ||| ||||| ||||| |||||||||||||||||||||||    
T  11344425 atataagtgcttatgcataagatatttctataacaaaagataaaa 11344381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 13630424 - 13630380
Alignment:
Q  155 tcatatacgtgtttatgtataagttatttctataacaaaagataa 199  Q
    ||||||| ||| ||||||||||||||||||| || ||||||||||    
T  13630424 tcatataggtgcttatgtataagttatttctctatcaaaagataa 13630380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 21356356 - 21356296
Alignment:
Q  151 catatcatatacgtgtttatgtataagttatttctataacaaaagataaaattagtcaatt 211  Q
    ||||||||||| ||| ||||| ||||||||||||| ||| ||||| | |||| ||||||||    
T  21356356 catatcatataagtgcttatggataagttatttctgtaagaaaagctcaaataagtcaatt 21356296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 32694131 - 32694186
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| ||||||||| || || ||||||||| |||||||||| |||||||||||||    
T  32694131 aagcgcttatcatataagtatt-atgtataagctatttctatatcaaaagataaaat 32694186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 39567845 - 39567877
Alignment:
Q  170 tgtataagttatttctataacaaaagataaaat 202  Q
    |||||||| ||||||||||||||||||||||||    
T  39567845 tgtataagatatttctataacaaaagataaaat 39567877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 43199356 - 43199388
Alignment:
Q  170 tgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||||| |||||||||||||||    
T  43199356 tgtataagttatttctacaacaaaagataaaat 43199388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 19422317 - 19422388
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagata 198  Q
    |||||||||||  ||||| |||||| |||||||||  || ||||||||||||||||||||||||||||||||    
T  19422317 ttggataaacagcttaattaagcgcttatcatataaatgcttatgtataagttatttctataacaaaagata 19422388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 35743223 - 35743278
Alignment:
Q  147 agcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  35743223 agcgcttatcatatatgtgttgatgtacaagttatttctataacaaaagataaaat 35743278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 4191664 - 4191712
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  4191664 tatcatataagtgcttatgtataagctatttctataacaaaagataaaa 4191712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 969516 - 969441
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||| ||||| |||||| ||||||||| ||| |||| ||||||  |||||||||| ||||| ||||||    
T  969516 ttggataaacaacttaatcaagcgcttatcatataagtgcttatctataagcaatttctataataaaaggtaaaat 969441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 47970245 - 47970292
Alignment:
Q  155 tcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaaagataaaat 47970292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 51044594 - 51044555
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  51044594 gtgtttatgtataagctatttctataacaaaagataaaat 51044555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 24936239 - 24936284
Alignment:
Q  157 atatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||    
T  24936239 atataagtggttatgtataagttatttctataacaaaatataaaat 24936284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 28623218 - 28623263
Alignment:
Q  157 atatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  28623218 atataagtgcttatgtataagttatttatataacaaaagataaaat 28623263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 30024625 - 30024674
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||  ||||| ||||||||||||||||||||||||||||||    
T  30024625 tatcatataagtacttatgcataagttatttctataacaaaagataaaat 30024674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 52645882 - 52645845
Alignment:
Q  165 gtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  52645882 gtttatgtataagctatttctataacaaaagataaaat 52645845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 3176254 - 3176218
Alignment:
Q  166 tttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||||||||||||||| ||||    
T  3176254 tttatgtataagttatttctataacaaaagattaaat 3176218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 11158525 - 11158453
Alignment:
Q  129 ggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    |||||||||  ||||| |||||| ||||||||| ||||||||| ||| ||||||||||||  |||||| ||||    
T  11158525 ggataaacagcttaatcaagcgcttatcatataggtgtttatgcatacgttatttctatagtaaaagacaaaa 11158453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 27321989 - 27321941
Alignment:
Q  140 ttaataaagcgcatatcatatacgtgtttatgtataagttatttctata 188  Q
    ||||| ||| || ||||||||| ||||||||||||||||||||||||||    
T  27321989 ttaattaagggcttatcatataagtgtttatgtataagttatttctata 27321941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 29601152 - 29601104
Alignment:
Q  154 atcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||||||| |||||||| || ||||||| ||||    
T  29601152 atcatatacgtgtttatgtataagctatttctacaataaaagatcaaat 29601104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 44119295 - 44119259
Alignment:
Q  165 gtttatgtataagttatttctataacaaaagataaaa 201  Q
    |||||||||||||||||||||||| ||||||||||||    
T  44119295 gtttatgtataagttatttctatagcaaaagataaaa 44119259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 6364088 - 6364123
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||| ||||||||||||||||||||||||    
T  6364088 ttatgtataagctatttctataacaaaagataaaat 6364123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 42641768 - 42641729
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  42641768 gtgtttatgtataagctatttccataacaaaagataaaat 42641729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 30207728 - 30207666
Alignment:
Q  140 ttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||| |||| | ||||||||| ||| ||||||||| |||| ||||||||||||| |||||||    
T  30207728 ttaattaagcacttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaat 30207666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 44249225 - 44249259
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaa 201  Q
    |||||||||||||||||| ||||||||||||||||    
T  44249225 ttatgtataagttatttcaataacaaaagataaaa 44249259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 49219059 - 49219113
Alignment:
Q  148 gcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| ||||||||  ||| ||| |||||||||||||||||||||||| |||||||    
T  49219059 gcgcttatcatatgagtggttaggtataagttatttctataacaaaatataaaat 49219113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 49803151 - 49803185
Alignment:
Q  168 tatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||||||||| |||||||||||||    
T  49803151 tatgtataagttatttctatagcaaaagataaaat 49803185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 53155171 - 53155236
Alignment:
Q  134 aacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    ||||| ||||| |||||| |||||||| | || ||||||||||| ||||| ||||||||||||||||    
T  53155171 aacaacttaattaagcgcttatcatatgcatgcttatgtataagctattt-tataacaaaagataaa 53155236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 2980616 - 2980575
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaa 194  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||    
T  2980616 tatcatataagtgcttatgtataagctatttctataacaaaa 2980575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 4663841 - 4663792
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| |||| ||| |||||||||||||||||||||||||||  |||||||    
T  4663841 tatcgtataagtgcttatgtataagttatttctataacaaagaataaaat 4663792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 8422982 - 8422933
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||||||| ||||| ||||| ||||||||||||    
T  8422982 tatcatatatgtgcttatgtataagctatttttataaaaaaagataaaat 8422933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 9319340 - 9319295
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagata 198  Q
    |||||||||  ||||| ||||||||| |||||||||||||||||||    
T  9319340 tatcatataaatgtttctgtataagtaatttctataacaaaagata 9319295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 23815311 - 23815344
Alignment:
Q  169 atgtataagttatttctataacaaaagataaaat 202  Q
    |||| |||||||||||||||||||||||||||||    
T  23815311 atgtttaagttatttctataacaaaagataaaat 23815344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 41050621 - 41050670
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||||| ||||||||  ||||||||||||||||||| ||||    
T  41050621 tatcatataagtgttaatgtataaactatttctataacaaaagatgaaat 41050670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 51556012 - 51555963
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||||||| ||||  ||||||||||||||||||    
T  51556012 tatcatataagtgcttatgtataagctattattataacaaaagataaaat 51555963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 485999 - 486055
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| ||||||| | ||| ||||||||| | |||||||| |||||||||||||||    
T  485999 aagcgcttatcataaaagtgcttatgtatatgctatttctaaaacaaaagataaaat 486055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 3249866 - 3249810
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| ||||||||| |||| ||||| |||||||||||||| | ||||||| ||||    
T  3249866 aagcgcttatcatataagtgtgtatgtgtaagttatttctatgataaaagatgaaat 3249810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 20907103 - 20907147
Alignment:
Q  158 tatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| ||||||||||||||| ||||| ||||| ||||||||||||    
T  20907103 tataagtgtttatgtataagctatttgtataagaaaagataaaat 20907147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 21683614 - 21683578
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataa 199  Q
    ||||||||||||||  |||||||||||||||||||||    
T  21683614 gtgtttatgtataaactatttctataacaaaagataa 21683578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 23819015 - 23819055
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaa 193  Q
    ||||||| | |||||||||||||||||||||| ||||||||    
T  23819015 tatcatacaagtgtttatgtataagttatttccataacaaa 23819055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 24160662 - 24160594
Alignment:
Q  131 ataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataa 199  Q
    |||||||| ||||| || ||| ||||||||| ||| ||||  ||||| | |||||||||||||||||||    
T  24160662 ataaacaacttaattaaacgcttatcatataagtgcttataaataagctttttctataacaaaagataa 24160594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 54986348 - 54986388
Alignment:
Q  154 atcatatacgtgtttatgtataagttatttctataacaaaa 194  Q
    |||||||| || |||||||||||| ||||||||||||||||    
T  54986348 atcatataagtttttatgtataagctatttctataacaaaa 54986388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 36638645 - 36638719
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    |||||||||||| ||||| |||| | ||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  36638645 ttggataaacaacttaattaagcacttatcatataggtgttaatgtataaactatttctataacaaaagataaaa 36638719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 29117088 - 29117026
Alignment:
Q  140 ttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||| |||||| |||||||||  || ||||||||| ||||||||||||||||||||||||||    
T  29117088 ttaattaagcgcttatcatatagctgattatgtatatgttatttctataacaaaagataaaat 29117026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 35135804 - 35135758
Alignment:
Q  156 catatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  35135804 catataagtgtttatgtataagatatttctataacaaaagataaaat 35135758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 40499846 - 40499773
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||||||||||| ||||| ||  || ||||||||| ||| ||||||| ||||||||||||||||||| ||||||    
T  40499846 ttggataaacaacttaattaaaagcttatcatataagtgcttatgtacaagttatttctataacaaatgataaa 40499773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 26516216 - 26516272
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| ||||||||| ||| ||||||||||| |||||||| |||||||||||||||    
T  26516216 aagcgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaat 26516272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 38033893 - 38033940
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||||||||    
T  38033893 tatcaaataagtgtttatgtataagttatttatataacaaaagataaa 38033940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 18704179 - 18704133
Alignment:
Q  154 atcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||    
T  18704179 atcatataagttcttatgtataagttatttctataacaaaagataaa 18704133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 13224354 - 13224403
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||| | ||| ||||||||||| ||||||||||||||||||||||||    
T  13224354 tatcatagaagtgcttatgtataagctatttctataacaaaagataaaat 13224403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 20982280 - 20982231
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||||||| ||||||||||||||| ||||||||    
T  20982280 tatcatataagtgcttatgtataagctatttctataacaaaggataaaat 20982231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 40097548 - 40097499
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| |||  |||||||||||||||||||||||| ||||||||||    
T  40097548 tatcatataagtgcgtatgtataagttatttctataacagaagataaaat 40097499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 1773556 - 1773520
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaatt 203  Q
    ||||||||||| |||||||||||||||||||||||||    
T  1773556 ttatgtataagctatttctataacaaaagataaaatt 1773520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 7096271 - 7096223
Alignment:
Q  154 atcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| | ||| ||||||||||| ||||||||||||||||||||||||    
T  7096271 atcatacaagtgcttatgtataagctatttctataacaaaagataaaat 7096223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 10391278 - 10391333
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaattagtca 208  Q
    ||||||||| ||| ||| ||||||| ||||| |||||||||||||||||| |||||    
T  10391278 tatcatataagtgcttacgtataagctatttttataacaaaagataaaataagtca 10391333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 12407792 - 12407757
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||| ||||||||||||||||||||||||    
T  12407792 ttatgtataagctatttctataacaaaagataaaat 12407757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 12460131 - 12460096
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||| ||||||||||||||||||||||||    
T  12460131 ttatgtataagctatttctataacaaaagataaaat 12460096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 33459066 - 33459031
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||||||||||||| |||||    
T  33459066 ttatgtataagttatttctataacaaaagacaaaat 33459031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 34117664 - 34117629
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||||||| ||||||||||||||||    
T  34117664 ttatgtataagttatttctttaacaaaagataaaat 34117629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 40048411 - 40048376
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||| ||||||||||||||||||||||    
T  40048411 ttatgtataagttgtttctataacaaaagataaaat 40048376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 4991088 - 4991042
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataa 199  Q
    ||||||||| |||||| |||||||| ||||| |||||||||||||||    
T  4991088 tatcatataagtgtttgtgtataagctatttttataacaaaagataa 4991042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 912794 - 912745
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| | ||||||| ||||||||||||||||||| || |||||||    
T  912794 tatcatataagcgtttatgaataagttatttctataacacaatataaaat 912745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 6739797 - 6739846
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| | |||||||||||||| ||||||||||  |||||||||||    
T  6739797 tatcatataagcgtttatgtataagtcatttctataaataaagataaaat 6739846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 8089242 - 8089275
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaa 200  Q
    ||||||||||||||||||||||||||||| ||||    
T  8089242 ttatgtataagttatttctataacaaaagttaaa 8089275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 9927520 - 9927561
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaaatta 204  Q
    ||||||||||||||||||||| ||||  ||||||||||||||    
T  9927520 gtgtttatgtataagttatttgtatagtaaaagataaaatta 9927561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 28586911 - 28586862
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| |||||||||   ||||||||||||||||||||||||    
T  28586911 tatcatatatgtggttatgtatacactatttctataacaaaagataaaat 28586862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 29588809 - 29588854
Alignment:
Q  157 atatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||| ||| ||||||||||| |||||||||||||||| |||||||    
T  29588809 atataagtgcttatgtataagctatttctataacaaaatataaaat 29588854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 35095940 - 35095879
Alignment:
Q  141 taataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| |||||| ||||||||| ||| |||| | |||  ||||||||||||||||||||||||    
T  35095940 taattaagcgcttatcatataagtgcttatatttaaactatttctataacaaaagataaaat 35095879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 39128568 - 39128613
Alignment:
Q  157 atatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||| ||| ||||||||||| || |||||||||||||||||||||    
T  39128568 atatatgtgcttatgtataagctaattctataacaaaagataaaat 39128613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 11714992 - 11714960
Alignment:
Q  172 tataagttatttctataacaaaagataaaatta 204  Q
    |||||| ||||||||||||||||||||||||||    
T  11714992 tataagctatttctataacaaaagataaaatta 11714960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 27106063 - 27106019
Alignment:
Q  158 tatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| ||| ||| |||||||| |||||||||||||||||||||||    
T  27106063 tataagtgcttacgtataagtcatttctataacaaaagataaaat 27106019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 38766995 - 38766939
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| ||| ||||| ||||| ||| || |||||||||||||||||||| ||||||    
T  38766995 aagcgcttatgatataagtgttaatggatgagttatttctataacaaaagctaaaat 38766939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 38819720 - 38819672
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    ||||||||| | | ||||||||| | |||||||||||||||||||||||    
T  38819720 tatcatataagggcttatgtatacgctatttctataacaaaagataaaa 38819672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 4202300 - 4202227
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||||||| ||| ||||| |||||  ||||||||| ||| ||| ||||||||||||||||||||||||||||||    
T  4202300 ttggataagcaacttaattaagcgtttatcatataagtgcttaagtataagttatttctataacaaaagataaa 4202227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 33339588 - 33339516
Alignment:
Q  130 gataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||||| ||| |  ||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  33339588 gataaacaacttaattaagtggttatcatataggtgtttatgtataagctatttctataccaaaagataaaat 33339516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 16982081 - 16982032
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  16982081 tatcatataagtgtttatgtataacttatttcgataacaaaagataaaat 16982032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 15360829 - 15360868
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  15360829 gtgtttatgtattagttatttctataacaaaagataaaat 15360868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 27140420 - 27140459
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  27140420 gtgtttatgtgtaagttatttctataacaaaagataaaat 27140459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 870963 - 871021
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaatta 204  Q
    |||||| ||||||||| ||| ||||||||||  ||||| ||||||||||||||||||||    
T  870963 aagcgcttatcatataagtgcttatgtataaactatttttataacaaaagataaaatta 871021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 49517006 - 49517044
Alignment:
Q  164 tgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  49517006 tgtttgtgtataagttatttctataacaaaagataaaat 49517044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 4200154 - 4200203
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| || |||||||| |||||||||||| ||||||||||||||||||    
T  4200154 tatcatctaagtgtttatatataagttatttttataacaaaagataaaat 4200203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 13037791 - 13037836
Alignment:
Q  155 tcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  13037791 tcatataagtgcttatgtataagctatttctataacaaaagataaa 13037836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 23895261 - 23895310
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||  ||||||||||| ||||||||||||||||||||||||    
T  23895261 tatcatataagttattatgtataagctatttctataacaaaagataaaat 23895310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 29046084 - 29046011
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||||||||||  ||||| |||| | |||| |||| ||| || |||||||| ||||||||||||||||||||||    
T  29046084 ttggataaacagattaattaagcacttatcgtataagtgcttgtgtataagatatttctataacaaaagataaa 29046011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 49557066 - 49557115
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| |  |||||||||||||||||||||||||||||||||    
T  49557066 tatcatataagtgctgctgtataagttatttctataacaaaagataaaat 49557115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 11218250 - 11218178
Alignment:
Q  130 gataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| | |||||| |||||  ||||||||| ||||||||||||||||||||| |||  |||||||| ||||    
T  11218250 gataaagagtttaattaagcgtttatcatataagtgtttatgtataagttatttatatgtcaaaagattaaat 11218178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 1662497 - 1662548
Alignment:
Q  151 catatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||| ||||||||||||||  || ||||||||| |||||||||||    
T  1662497 catatcatataagtgtttatgtataaactacttctataacgaaagataaaat 1662548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 4256181 - 4256142
Alignment:
Q  159 atacgtgtttatgtataagttatttctataacaaaagata 198  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  4256181 atacgtgtttatgtataagctatttctacaacaaaagata 4256142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 15437888 - 15437939
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaatta 204  Q
    |||||| || ||||||||||| ||| |||||||||||||||| |||||||||    
T  15437888 tatcatctatgtgtttatgtaaaagctatttctataacaaaaaataaaatta 15437939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 36641814 - 36641849
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| |||||||||||||||||||||||||||||||    
T  36641814 ttatatataagttatttctataacaaaagataaaat 36641849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 37593804 - 37593765
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  37593804 gtgtttatgtataaggtatttctataacacaagataaaat 37593765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 41638481 - 41638406
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||| || || |||| | ||||||||| ||| |||||||||| |||||| || |||| ||||||||||    
T  41638481 ttggataaacaacttgattaagcacttatcatataagtgcttatgtataatttatttatagaacacaagataaaat 41638406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 50319231 - 50319266
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||| ||||||||||||||||||||||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaat 50319266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 52286577 - 52286652
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||| | |||||  ||||| ||||||||| | | ||||| ||||| |||||||| |||||||||||||||    
T  52286577 ttggataaaccacttaatttagcgcttatcatataagcgcttatgaataagatatttctacaacaaaagataaaat 52286652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 29794065 - 29794011
Alignment:
Q  155 tcatatacgtgtttatgtataagttatttctataacaaaagataaaattagtcaa 209  Q
    ||||||| ||||||||||||| | ||||| | |||||||||||||||| ||||||    
T  29794065 tcatatatgtgtttatgtataggctatttttgtaacaaaagataaaataagtcaa 29794011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 37818403 - 37818437
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaa 201  Q
    |||||||||||||||||||||||||| ||||||||    
T  37818403 ttatgtataagttatttctataacaagagataaaa 37818437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 48830210 - 48830172
Alignment:
Q  164 tgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||||||| || |||||||||||    
T  48830210 tgtttatgtataagttatttctattaccaaagataaaat 48830172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 6659628 - 6659677
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||||||  |||||||||| |||||||||||||    
T  6659628 tatcatataagtgcttatgtataaactatttctatagcaaaagataaaat 6659677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 26679203 - 26679244
Alignment:
Q  157 atatacgtgtttatgtataagttatttctataacaaaagata 198  Q
    ||||| |||||||||| |||||||||||||||||||| ||||    
T  26679203 atataagtgtttatgtgtaagttatttctataacaaacgata 26679244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 44032144 - 44032095
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| |||||||||||||||   ||||||||||||||| ||||||    
T  44032144 tatcatataagtgtttatgtataagccgtttctataacaaaagctaaaat 44032095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 47003043 - 47002970
Alignment:
Q  129 ggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||| ||||   |||  |||| ||||||||| |||| ||||||| |||| ||||||||||||    
T  47003043 ggataaacaatttaattaagcatctatagtataagtgtttatgcataaattatttcgataataaaagataaaat 47002970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 172708 - 172676
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataa 199  Q
    ||||||||||| |||||||||||||||||||||    
T  172708 ttatgtataagctatttctataacaaaagataa 172676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 6976887 - 6976919
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataa 199  Q
    ||||||||||| |||||||||||||||||||||    
T  6976887 ttatgtataagatatttctataacaaaagataa 6976919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 202
Target Start/End: Complemental strand, 14737829 - 14737801
Alignment:
Q  174 taagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||||||||||||    
T  14737829 taagttatttctataacaaaagataaaat 14737801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 17269177 - 17269217
Alignment:
Q  155 tcatatacgtgtttatgtataagttatttctataacaaaag 195  Q
    ||||||| ||| |||||||||||||||||||| ||||||||    
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaag 17269217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 192
Target Start/End: Original strand, 20713592 - 20713620
Alignment:
Q  164 tgtttatgtataagttatttctataacaa 192  Q
    |||||||||||||||||||||||||||||    
T  20713592 tgtttatgtataagttatttctataacaa 20713620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 24146390 - 24146362
Alignment:
Q  167 ttatgtataagttatttctataacaaaag 195  Q
    |||||||||||||||||||||||||||||    
T  24146390 ttatgtataagttatttctataacaaaag 24146362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 25707098 - 25707134
Alignment:
Q  166 tttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  25707098 tttatctataagatatttctataacaaaagataaaat 25707134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 30815807 - 30815731
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtg-tttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| ||||| ||||| |||||| |||||||||  |  ||||||| |||| | ||||||||||||||||||||||    
T  30815807 ttggatcaacaacttaattaagcgcttatcatataattactttatgtctaagctttttctataacaaaagataaaat 30815731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 36151637 - 36151601
Alignment:
Q  166 tttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||| |||||| |||||||||||||||||    
T  36151637 tttatgtataagctatttcaataacaaaagataaaat 36151601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 43333625 - 43333673
Alignment:
Q  154 atcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||| ||||| |||||||||||||||||| || |||| |||||||    
T  43333625 atcatatatgtgttcatgtataagttatttctagaagaaaatataaaat 43333673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 46504362 - 46504310
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaattag 205  Q
    ||||||||| |||||| | |||||  ||||| |||||||||||||||||||||    
T  46504362 tatcatataagtgtttgtctataaactatttttataacaaaagataaaattag 46504310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 50998477 - 50998525
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    ||||||||| | | ||||||||||| ||||||| |||||||||||||||    
T  50998477 tatcatataggcgcttatgtataagctatttctgtaacaaaagataaaa 50998525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 52190063 - 52190099
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataa 189  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  52190063 tatcatataagtgtttatgtataagttttttctataa 52190099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 9920 - 9869
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaatta 204  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  9920 tatcatataggtgcttatgtataagttatttctataacaaaaaataaaatta 9869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 1219 - 1170
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  1219 tatcatataagtgcttatgtataagctatttctataacaaaagataaaat 1170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 2756 - 2805
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  2756 tatcatataagtgcttatgtataagctatttctataacaaaagataaaat 2805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 42542 - 42591
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||||    
T  42542 tatcatataagtgcttatgtataagtcatttctataacaaaagataaaat 42591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 2699219 - 2699280
Alignment:
Q  141 taataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| |||||| |||||||||||||| ||| ||||||||||||||| ||||||| |||||||    
T  2699219 taattaagcgcctatcatatacgtgtctatatataagttatttctacaacaaaatataaaat 2699280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 9928191 - 9928228
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaa 200  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9928191 gtgtttatgtataagttatttctataacaaaagataaa 9928228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 40728563 - 40728514
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  40728563 tatcatataagtgttcatgcataagttatttctataacaaaagataaaat 40728514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 43812500 - 43812452
Alignment:
Q  156 catatacgtgtttatgtataagttatttctataacaaaagataaaatta 204  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||    
T  43812500 catataagtgtttatgtatagtttatttctataacaaaagataaaatta 43812452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 32506992 - 32507031
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  32506992 gtgtttatgtataagttatttctacaacaaaagataaaat 32507031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 10939343 - 10939381
Alignment:
Q  164 tgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  10939343 tgtttatgtataagttatttctattacaaaagataaaat 10939381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 11188297 - 11188251
Alignment:
Q  156 catatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  11188297 catataagtgcttatgtataagttgtttctataacaaaagataaaat 11188251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 14482127 - 14482176
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||||||  ||||||||||||||||||||||||    
T  14482127 tatcatataagtgcttatgtataaactatttctataacaaaagataaaat 14482176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 29699179 - 29699228
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||  || ||||||| ||||||||||||||||||||||||||||    
T  29699179 tatcatataaatgcttatgtacaagttatttctataacaaaagataaaat 29699228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 1433470 - 1433518
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||| ||||    
T  1433470 tatcatataagtggttatgtataagttatttctataataaaagaaaaaa 1433518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 10062269 - 10062229
Alignment:
Q  156 catatacgtgtttatgtataagttatttctataacaaaaga 196  Q
    |||||| |||||||||||||||||||||||||| |||||||    
T  10062269 catatatgtgtttatgtataagttatttctataccaaaaga 10062229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 31884512 - 31884568
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| ||||||| | |||  ||||||||||||||||||||||||||| |||||||    
T  31884512 aagcgcttatcatacaagtgcatatgtataagttatttctataacaaaatataaaat 31884568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 3945209 - 3945248
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  3945209 gtgtttatatataagttatttcaataacaaaagataaaat 3945248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 4558733 - 4558772
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  4558733 gtgtttatgtataagctatttctataataaaagataaaat 4558772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 26215435 - 26215470
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26215435 ttatgtataagctatttctataacaaaagataaaat 26215470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 202
Target Start/End: Original strand, 26820142 - 26820173
Alignment:
Q  171 gtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||||||||||||||||||||    
T  26820142 gtataagttatttctataacaaaagataaaat 26820173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 29170085 - 29170034
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaatta 204  Q
    ||||||||| ||| ||||||||||||| ||||||||| || |||||||||||    
T  29170085 tatcatataagtgcttatgtataagttctttctataagaatagataaaatta 29170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 38561645 - 38561700
Alignment:
Q  147 agcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||| ||| ||||| |||| ||| |||||||||||| ||||||||||||||||||    
T  38561645 agcgcttattatataagtgtctatatataagttatttatataacaaaagataaaat 38561700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 40280356 - 40280301
Alignment:
Q  147 agcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||| ||||||||| |||  ||| ||||||||||||||| |||||||||||||||    
T  40280356 agcgcttatcatataagtgcctatatataagttatttctacaacaaaagataaaat 40280301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 42597340 - 42597375
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||| ||||||||||||||||||||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaaat 42597375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 26813950 - 26813900
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataac-aaaagataaaat 202  Q
    ||||||||| ||| |||||||||| ||||||||||||| ||||||||||||    
T  26813950 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaat 26813900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 1561218 - 1561251
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaa 200  Q
    |||||||||||||||||||||||| |||||||||    
T  1561218 ttatgtataagttatttctataacgaaagataaa 1561251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 5226527 - 5226576
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||||||||||||||   ||||| |||||||||||||||||    
T  5226527 tatcatataagtgtttatgtataaacaatttcaataacaaaagataaaat 5226576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 34563175 - 34563224
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| |||| |||||||||||||||| ||||| ||||||||    
T  34563175 tatcatataagtgcttatatataagttatttctatgacaaaggataaaat 34563224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 35298623 - 35298574
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||||||| ||||||  ||||||||||||||||    
T  35298623 tatcatataagtgcttatgtataagctatttcagtaacaaaagataaaat 35298574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 38874571 - 38874620
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| |||| ||||||||||||||||| ||||| |||| |||||||||||    
T  38874571 tatcgtataagtgtttatgtataagttgtttctgtaactaaagataaaat 38874620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 39392806 - 39392757
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| |||  |||||||||  ||||||||||||||||||||||||    
T  39392806 tatcatataagtggctatgtataaactatttctataacaaaagataaaat 39392757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 42370532 - 42370459
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||||||||||  |||||||||| | |||||||| |||| ||||||||||| | | ||| |||||||| |||||    
T  42370532 ttggataaacagcttaataaagctcttatcatatgcgtgcttatgtataagctgtatctgtaacaaaatataaa 42370459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 26056015 - 26056059
Alignment:
Q  158 tatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| ||||||||||||||| || ||||| |||||||||||||||    
T  26056015 tataagtgtttatgtataagctaattctaaaacaaaagataaaat 26056059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 200
Target Start/End: Original strand, 33522430 - 33522458
Alignment:
Q  172 tataagttatttctataacaaaagataaa 200  Q
    |||||||||||||||||||||||||||||    
T  33522430 tataagttatttctataacaaaagataaa 33522458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 36644023 - 36643971
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagata 198  Q
    |||||| ||| |||||||| | |||||||||| ||||||||||| ||||||||    
T  36644023 aagcgcttataatatacgtatctatgtataagctatttctataataaaagata 36643971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 44241785 - 44241834
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  44241785 tatcatataagtgtgtatgtataagttatttctataacaacagataaaat 44241834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 30496622 - 30496678
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||| ||| ||||||||||||||  |||||||||||||||| |||||||    
T  30496622 aagcgcatatcacataagtgtttatgtataaactatttctataacaaaatataaaat 30496678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 1432098 - 1432063
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||||||||||||||||||||||||    
T  1432098 ttatgtataagttatttctataacaaaagataaaat 1432063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 2223073 - 2223120
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  2223073 tatcgtataagtgtttatgtataagctatttctataacaaaagataaa 2223120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 33894549 - 33894604
Alignment:
Q  154 atcatatacgtgtttatgtataagttatttctataacaaaagataaaattagtcaa 209  Q
    ||||| || ||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  33894549 atcatgtaagtgcttatgtataagctatttctataacaaaagataaaataagtcaa 33894604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 35809039 - 35809000
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  35809039 gtgtttatgtataagctatttctataacaaaagataaaat 35809000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 10079510 - 10079436
Alignment:
Q  128 tggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||  ||||| |||||| ||||| ||| || | |||||||||| || |||||||||||||||||||||    
T  10079510 tggataaacagcttaatcaagcgcttatcaaataagtttgtatgtataagctacttctataacaaaagataaaat 10079436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 4591471 - 4591516
Alignment:
Q  157 atatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  4591471 atataagtgtttatgtataagctatctctataacaaaagataaaat 4591516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 6552415 - 6552366
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||| |||||||||||| |||||||||||||||    
T  6552415 tatcatataagtgcttatgtacaagttatttctacaacaaaagataaaat 6552366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 49060465 - 49060514
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| || |||||||||||| |||||||||||||||| |||||||    
T  49060465 tatcatataagtatttatgtataagctatttctataacaaaaaataaaat 49060514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 7244627 - 7244675
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    ||||||||| ||| ||||||||||| |||||||||| ||||||||||||    
T  7244627 tatcatataagtgcttatgtataagctatttctatatcaaaagataaaa 7244675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 24973870 - 24973918
Alignment:
Q  154 atcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||| ||| ||||||| ||| ||||||||||||||||||||||||    
T  24973870 atcatataagtgcttatgtaaaagctatttctataacaaaagataaaat 24973918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 27481435 - 27481391
Alignment:
Q  157 atatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||    
T  27481435 atataagtgtttatgtataagctatttctataacaaaggataaaa 27481391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 2013138 - 2013173
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||| |||||||||||||||||||||||||    
T  2013138 ttatgtataatttatttctataacaaaagataaaat 2013173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 3610883 - 3610836
Alignment:
Q  155 tcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||| ||| ||||||||||| |||||||| |||||||||||||||    
T  3610883 tcatataagtgcttatgtataagctatttctacaacaaaagataaaat 3610836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 28165030 - 28165065
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||| ||||||||||||||||||||||    
T  28165030 ttatgtataagttctttctataacaaaagataaaat 28165065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 201
Target Start/End: Original strand, 28702698 - 28702733
Alignment:
Q  166 tttatgtataagttatttctataacaaaagataaaa 201  Q
    |||||||||||| |||||||||||||||||||||||    
T  28702698 tttatgtataagctatttctataacaaaagataaaa 28702733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 25507286 - 25507320
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagat 197  Q
    |||||||||||||||||||||||||| ||||||||    
T  25507286 gtgtttatgtataagttatttctataccaaaagat 25507320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 25558324 - 25558290
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagat 197  Q
    |||||||||||||||||||||||||| ||||||||    
T  25558324 gtgtttatgtataagttatttctataccaaaagat 25558290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 25558522 - 25558488
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagat 197  Q
    |||||||||||||||||||||||||| ||||||||    
T  25558522 gtgtttatgtataagttatttctataccaaaagat 25558488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 35536011 - 35536081
Alignment:
Q  132 taaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||| |||||  ||||| |||||||||   | ||||||||||| ||||||||||||| ||||||||||    
T  35536011 taaacaacttaattgagcgcttatcatataaaggcttatgtataagctatttctataacataagataaaat 35536081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 39591593 - 39591563
Alignment:
Q  172 tataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||||||||||||||    
T  39591593 tataagttatttctataacaaaagataaaat 39591563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 46213727 - 46213777
Alignment:
Q  152 atatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||| ||| ||||||| ||| |||||||||||||||| |||||||    
T  46213727 atatcatataagtgcttatgtaaaagctatttctataacaaaatataaaat 46213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 46223212 - 46223170
Alignment:
Q  158 tatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||| ||||||||||||||| |||||| |||||||||||||||    
T  46223212 tataagtgtttatgtataagctatttccataacaaaagataaa 46223170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 991177 - 991226
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| || ||||||||||||||||  |||||||||||||||    
T  991177 tatcatataagtgcttgtgtataagttatttctgcaacaaaagataaaat 991226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 991995 - 992044
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||| ||||||||| |||||||||||||| |||||||    
T  991995 tatcatataagtgcttacgtataagttgtttctataacaaaaaataaaat 992044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 1431453 - 1431404
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| |||||||||||||||||||||| ||||  ||| |||||||    
T  1431453 tatcatataagtgtttatgtataagttatttccataatgaaaaataaaat 1431404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 2894752 - 2894789
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaa 200  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  2894752 gtgttcatgtataagctatttctataacaaaagataaa 2894789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 3968324 - 3968291
Alignment:
Q  169 atgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||| |||||||||||||    
T  3968324 atgtataagttatttctatagcaaaagataaaat 3968291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 5373150 - 5373199
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| || ||| ||||||||| | ||||||||||||||||||||||||    
T  5373150 tatcatgtaagtgcttatgtatatgctatttctataacaaaagataaaat 5373199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 22759111 - 22759160
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| | |||||||| |||| ||||| ||||||||||||||||||    
T  22759111 tatcatataagcgtttatgtttaagctatttgtataacaaaagataaaat 22759160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 25511552 - 25511601
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| |||||  ||||||| |||||||||||||||||||| ||||    
T  25511552 tatcatataagtgttgttgtataaattatttctataacaaaagatgaaat 25511601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 25600691 - 25600724
Alignment:
Q  169 atgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||||||||| |||||||    
T  25600691 atgtataagttatttctataacaaaatataaaat 25600724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 28178910 - 28178943
Alignment:
Q  169 atgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||||||||||||||||||||||||    
T  28178910 atgtataagctatttctataacaaaagataaaat 28178943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 30535506 - 30535539
Alignment:
Q  171 gtataagttatttctataacaaaagataaaatta 204  Q
    |||||||||| |||||||||||||||||||||||    
T  30535506 gtataagttacttctataacaaaagataaaatta 30535539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 39551693 - 39551648
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagata 198  Q
    ||||||||| || |||| ||||||| ||||||||||||||||||||    
T  39551693 tatcatataagtatttaagtataagctatttctataacaaaagata 39551648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 47004012 - 47004061
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| |||||||| | |||| |||||||||||||| |||||||||    
T  47004012 tatcatataagtgtttatatgtaagctatttctataacaatagataaaat 47004061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 47395243 - 47395194
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||||||||||||| ||| || |||||||||||    
T  47395243 tatcatataagtggttatgtataagttatttatatcactaaagataaaat 47395194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 48157253 - 48157216
Alignment:
Q  165 gtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  48157253 gtttatgtataacttatttctataataaaagataaaat 48157216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 1417194 - 1417238
Alignment:
Q  158 tatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| ||||||||||||  ||||| ||||||||||||||||||    
T  1417194 tatacgggtttatgtataaactatttatataacaaaagataaaat 1417238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 5272954 - 5272914
Alignment:
Q  164 tgtttatgtataagttatttctataacaaaagataaaatta 204  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  5272954 tgtttatgtataaactatttatataacaaaagataaaatta 5272914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 5276123 - 5276195
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataa 199  Q
    ||||||||| || ||||| |||||  |||| | || ||| ||||||||||| ||||| |||||||||||||||    
T  5276123 ttggataaaaaacttaattaagcgtttatcgtttaagtgcttatgtataagctatttttataacaaaagataa 5276195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 21853256 - 21853212
Alignment:
Q  158 tatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| ||| |||| |||||||||||||||| ||||||||||||||    
T  21853256 tataagtgattatatataagttatttctattacaaaagataaaat 21853212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 22388049 - 22388001
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaa 201  Q
    |||||| || ||| ||||| ||||| |||||||||||||||||||||||    
T  22388049 tatcatttaagtgcttatggataagctatttctataacaaaagataaaa 22388001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 27389308 - 27389344
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataa 189  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  27389308 tatcatataagtgtttatgtataagctatttctataa 27389344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 27492714 - 27492762
Alignment:
Q  147 agcgcatatcatatacgtgtttatgtataagttatttctataacaaaag 195  Q
    ||||||||||||||| ||  ||||||||||  |||||||||||||||||    
T  27492714 agcgcatatcatataagttcttatgtataaactatttctataacaaaag 27492762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 31341112 - 31341168
Alignment:
Q  146 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| |||||| ||  || ||||||||||| ||||| ||||||||||||||||||    
T  31341112 aagcgcttatcatctaaatgcttatgtataagctatttgtataacaaaagataaaat 31341168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 35007542 - 35007578
Alignment:
Q  166 tttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||| |||||||||||| |||||||||||    
T  35007542 tttatgtataagctatttctataactaaagataaaat 35007578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 43153030 - 43152998
Alignment:
Q  170 tgtataagttatttctataacaaaagataaaat 202  Q
    |||||||| ||||||||||||||||||||||||    
T  43153030 tgtataagctatttctataacaaaagataaaat 43152998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 16790233 - 16790184
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  16790233 tatcatataagtgcttatatataagttatttctataacaaaagataaaat 16790184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 24605151 - 24605112
Alignment:
Q  163 gtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  24605151 gtgtttatgtataagttatttctataacaaaagatgaaat 24605112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 36887463 - 36887498
Alignment:
Q  169 atgtataagttatttctataacaaaagataaaatta 204  Q
    ||||||||||||||||||||||||||||||||||||    
T  36887463 atgtataagttatttctataacaaaagataaaatta 36887498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 37788780 - 37788834
Alignment:
Q  147 agcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  37788780 agcgtatatcatacaagtgtttatgtataagttattt-tataacaaaagataaaat 37788834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 41159008 - 41159083
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||| ||| ||||| || ||| |||| |||| ||| |||||||||||||||| ||||||| |||||||||||    
T  41159008 ttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaat 41159083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 20174029 - 20173979
Alignment:
Q  157 atatacgtgtttatgtataagttatttctataacaaaagataaaattagtc 207  Q
    ||||| ||| |||||||| ||||||||||||||||||||||||||| ||||    
T  20174029 atataagtgcttatgtattagttatttctataacaaaagataaaataagtc 20173979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 2128384 - 2128347
Alignment:
Q  165 gtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2128384 gtttatgtataagctatttctataacaaaagataaaat 2128347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 25185892 - 25185965
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||||||||||| ||||| ||| |  ||||||||| ||| ||||| ||||| ||||| ||||||||||||||||    
T  25185892 ttggataaacaacttaattaagtgtttatcatataagtgcttatgaataagatatttatataacaaaagataaa 25185965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 25964343 - 25964416
Alignment:
Q  129 ggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||| ||||| ||| || ||||||||| ||  || |||||||| ||||| ||||||||||||||||||    
T  25964343 ggataaacaacttaattaagtgcttatcatataagttcttttgtataagctatttttataacaaaagataaaat 25964416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 38462206 - 38462255
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| |||||||| |||||| |||||||||| |||||||||||||    
T  38462206 tatcatataagtgtttatttataagctatttctataccaaaagataaaat 38462255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 39971244 - 39971293
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| |||||||||||||| || ||||||||||||||||||    
T  39971244 tatcatataagtgcttatgtataagttacttatataacaaaagataaaat 39971293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 41028996 - 41028947
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||| |||||    
T  41028996 tatcatataagtgcttatgtataagctatttctataacaaaagaaaaaat 41028947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 43116573 - 43116524
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||| | |||||||||| |||| ||||||||||||||||||||||||    
T  43116573 tatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaat 43116524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 32095317 - 32095285
Alignment:
Q  172 tataagttatttctataacaaaagataaaatta 204  Q
    |||||||||||||||||||||||||||||||||    
T  32095317 tataagttatttctataacaaaagataaaatta 32095285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 32663578 - 32663614
Alignment:
Q  164 tgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||||||| ||||||||||||||||||||||||||||    
T  32663578 tgtttatgcataagttatttctataacaaaagataaa 32663614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 28283722 - 28283675
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    ||||||||| ||| ||||| |||||||| |||||||||||||||||||    
T  28283722 tatcatataagtgcttatgcataagttacttctataacaaaagataaa 28283675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 36193687 - 36193613
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||| ||| | |||  | ||||||||| ||||||||||||||| || |||||||||||| ||||||||    
T  36193687 ttggataaacaacttatttaagtacttatcatatatgtgtttatgtataaggta-ttctataacaaacgataaaat 36193613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 44488795 - 44488850
Alignment:
Q  139 tttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaa 194  Q
    |||||| |||||| |||  |||| ||||||||||||||| ||||||||||||||||    
T  44488795 tttaattaagcgcttattgtataggtgtttatgtataagctatttctataacaaaa 44488850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 48365010 - 48364975
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||| |||||||||||||||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaat 48364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 48528477 - 48528552
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||| | ||| ||| || ||||||||| ||  ||||||||||| |||||||||||||| | |||||||    
T  48528477 ttggataaacaactgaattaagagcttatcatataagtacttatgtataagctatttctataacaagaaataaaat 48528552  T

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Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 905116 - 905066
Alignment:
Q  152 atatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||| | | ||| ||||||| ||||||||||||||||||||||||    
T  905116 atatcatataagcgcttaagtataagctatttctataacaaaagataaaat 905066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 1395611 - 1395645
Alignment:
Q  168 tatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||| ||||||||||||||||||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaat 1395645  T

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Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 204
Target Start/End: Complemental strand, 23952230 - 23952200
Alignment:
Q  174 taagttatttctataacaaaagataaaatta 204  Q
    |||||||||||||||||||||||||||||||    
T  23952230 taagttatttctataacaaaagataaaatta 23952200  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 24158673 - 24158607
Alignment:
Q  127 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaa 193  Q
    |||||||||||  ||||| |||  | | ||||||| ||| |||||||||||||||||||||||||||    
T  24158673 ttggataaacaccttaattaagttcttgtcatataagtgcttatgtataagttatttctataacaaa 24158607  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 30669104 - 30669066
Alignment:
Q  164 tgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  30669104 tgtttatgtataagctatttttataacaaaagataaaat 30669066  T

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Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 39743841 - 39743879
Alignment:
Q  164 tgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  39743841 tgtttatgtataagttatttcaataacaaaatataaaat 39743879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 2153607 - 2153656
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| || ||||||||||||||||||  | ||||||||||||||||||    
T  2153607 tatcatgtaagtgtttatgtataagttacgtgtataacaaaagataaaat 2153656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 3182507 - 3182458
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| || |||||||||||||||||| |||||||  ||||||||||||    
T  3182507 tatcatttaagtgtttatgtataagttacttctatagaaaaagataaaat 3182458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 202
Target Start/End: Complemental strand, 10101601 - 10101572
Alignment:
Q  173 ataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||||||||||||||||||    
T  10101601 ataagttatttctataacaaaagataaaat 10101572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 202
Target Start/End: Complemental strand, 10212526 - 10212497
Alignment:
Q  173 ataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||||||||||||||||||    
T  10212526 ataagttatttctataacaaaagataaaat 10212497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 202
Target Start/End: Original strand, 10357378 - 10357407
Alignment:
Q  173 ataagttatttctataacaaaagataaaat 202  Q
    ||||||||||||||||||||||||||||||    
T  10357378 ataagttatttctataacaaaagataaaat 10357407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 16790501 - 16790452
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||||||| ||||| |||||||| |||||||||    
T  16790501 tatcatataagtgcttatgtataagctatttttataacaacagataaaat 16790452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 20143869 - 20143906
Alignment:
Q  172 tataagttatttctataacaaaagataaaattagtcaa 209  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  20143869 tataagttatttctataataaaagataaaataagtcaa 20143906  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 23269320 - 23269283
Alignment:
Q  172 tataagttatttctataacaaaagataaaattagtcaa 209  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  23269320 tataagttatttctataataaaagataaaataagtcaa 23269283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 24235811 - 24235782
Alignment:
Q  170 tgtataagttatttctataacaaaagataa 199  Q
    ||||||||||||||||||||||||||||||    
T  24235811 tgtataagttatttctataacaaaagataa 24235782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 27792797 - 27792846
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||||||| |||||| | |||||||||||||||    
T  27792797 tatcatataagtgcttatgtataagctatttcaaaaacaaaagataaaat 27792846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 32703063 - 32703112
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||  |||||||||||||| ||||||||| | ||||||||||||    
T  32703063 tatcatataaatgtttatgtataagctatttctattataaaagataaaat 32703112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 33882969 - 33883002
Alignment:
Q  169 atgtataagttatttctataacaaaagataaaat 202  Q
    |||||||| |||||||||||||||||||||||||    
T  33882969 atgtataaattatttctataacaaaagataaaat 33883002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 36445657 - 36445706
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||  || |||||||||||| |||||||||||||||||| |||||    
T  36445657 tatcatatgagtttttatgtataagctatttctataacaaaagagaaaat 36445706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 36519124 - 36519173
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| |||||||| ||||  ||||||||||||| |||||||||||    
T  36519124 tatcatataagtgtttatatatactttatttctataactaaagataaaat 36519173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 42809242 - 42809275
Alignment:
Q  169 atgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||||||||||||||||||||||||    
T  42809242 atgtataagctatttctataacaaaagataaaat 42809275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 44374789 - 44374740
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||| ||||||||||| ||| ||| ||||||||||||||||    
T  44374789 tatcatataagtgcttatgtataagctatatctttaacaaaagataaaat 44374740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 54775053 - 54775102
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||| | ||| ||| || |||||||||||||||||||||||||||||    
T  54775053 tatcataaaagtgcttacgtttaagttatttctataacaaaagataaaat 54775102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 23815992 - 23816024
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataa 199  Q
    ||||||||||||||||||||||| |||||||||    
T  23815992 ttatgtataagttatttctataataaaagataa 23816024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 24624145 - 24624181
Alignment:
Q  154 atcatatacgtgtttatgtataagttatttctataac 190  Q
    |||||||||||| |||||||||||| |||||||||||    
T  24624145 atcatatacgtgcttatgtataagtcatttctataac 24624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 48872276 - 48872316
Alignment:
Q  162 cgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||  ||||||||||||||||| ||||||    
T  48872276 cgtgtttatgtataatatatttctataacaaaagttaaaat 48872316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 6809 - 6735
Alignment:
Q  127 ttggataaacaatttaata-aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||||||||||| |||||| |||| | ||||||||| ||| ||||||||||  |||||||||||||||| |||||    
T  6809 ttggataaacaacttaatataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaa 6735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 116728 - 116654
Alignment:
Q  127 ttggataaacaatttaata-aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaa 200  Q
    |||||||||||| |||||| |||| | ||||||||| ||| ||||||||||  |||||||||||||||| |||||    
T  116728 ttggataaacaacttaatataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaa 116654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 27501 - 27550
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||| || ||| ||||||||||||||||||||||||| ||||||||||    
T  27501 tatcatgtaagtgcttatgtataagttatttctataacagaagataaaat 27550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 104265 - 104230
Alignment:
Q  167 ttatgtataagttatttctataacaaaagataaaat 202  Q
    |||||||||||||||||||||||||||| |||||||    
T  104265 ttatgtataagttatttctataacaaaaaataaaat 104230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 5944 - 5993
Alignment:
Q  153 tatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 202  Q
    ||||||||| ||||||||||||||   ||||| |||||||||||||||||    
T  5944 tatcatataagtgtttatgtataaacaatttcaataacaaaagataaaat 5993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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