View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8175_high_79 (Length: 228)

Name: NF8175_high_79
Description: NF8175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8175_high_79
NF8175_high_79
[»] chr7 (30 HSPs)
chr7 (1-216)||(43539739-43539975)
chr7 (94-186)||(35150735-35150827)
chr7 (94-185)||(35148204-35148295)
chr7 (1-77)||(26383431-26383508)
chr7 (94-212)||(28421132-28421245)
chr7 (94-219)||(339253-339373)
chr7 (94-212)||(5979347-5979460)
chr7 (94-212)||(20238824-20238937)
chr7 (1-77)||(35152849-35152926)
chr7 (1-78)||(3811488-3811566)
chr7 (1-78)||(3817630-3817708)
chr7 (94-184)||(5849403-5849492)
chr7 (94-212)||(3817484-3817597)
chr7 (94-185)||(351660-351749)
chr7 (94-185)||(3811366-3811455)
chr7 (1-78)||(351549-351627)
chr7 (1-78)||(28421278-28421356)
chr7 (94-212)||(15843820-15843933)
chr7 (94-212)||(15860929-15861042)
chr7 (1-63)||(22742265-22742327)
chr7 (1-85)||(339143-339226)
chr7 (97-161)||(22742148-22742212)
chr7 (97-160)||(26380960-26381023)
chr7 (1-78)||(7608189-7608267)
chr7 (1-78)||(35148328-35148406)
chr7 (27-75)||(15843734-15843783)
chr7 (27-75)||(15860843-15860892)
chr7 (115-163)||(12803893-12803941)
chr7 (102-185)||(7608324-7608407)
chr7 (3-78)||(5979494-5979571)
[»] chr6 (16 HSPs)
chr6 (1-216)||(31756384-31756616)
chr6 (1-212)||(4580494-4580719)
chr6 (1-212)||(8650976-8651201)
chr6 (94-212)||(25343498-25343611)
chr6 (94-212)||(25354085-25354198)
chr6 (94-161)||(21197249-21197316)
chr6 (95-161)||(21770786-21770852)
chr6 (1-78)||(25353973-25354051)
chr6 (1-51)||(12801887-12801937)
chr6 (113-212)||(21191039-21191133)
chr6 (1-78)||(21197360-21197438)
chr6 (1-63)||(21783662-21783723)
chr6 (1-63)||(21789885-21789946)
chr6 (2-78)||(28728047-28728123)
chr6 (1-63)||(21770901-21770962)
chr6 (1-41)||(17581398-17581438)
[»] chr4 (25 HSPs)
chr4 (94-216)||(49976460-49976581)
chr4 (94-212)||(24287860-24287973)
chr4 (94-161)||(26957022-26957089)
chr4 (94-212)||(6257378-6257491)
chr4 (102-216)||(44831781-44831897)
chr4 (94-212)||(48160833-48160946)
chr4 (94-212)||(48167052-48167165)
chr4 (1-78)||(10739658-10739734)
chr4 (1-78)||(10953427-10953503)
chr4 (1-63)||(24287749-24287811)
chr4 (91-172)||(4632252-4632333)
chr4 (1-78)||(10733671-10733747)
chr4 (94-212)||(10739512-10739625)
chr4 (1-78)||(10947440-10947516)
chr4 (94-212)||(10953281-10953394)
chr4 (94-212)||(33458440-33458553)
chr4 (94-212)||(33461565-33461678)
chr4 (94-212)||(10733525-10733638)
chr4 (94-212)||(10947294-10947407)
chr4 (1-78)||(26957123-26957201)
chr4 (1-85)||(44831928-44832012)
chr4 (3-78)||(33461711-33461787)
chr4 (1-78)||(50168357-50168435)
chr4 (96-160)||(32284555-32284619)
chr4 (95-159)||(50168469-50168532)
[»] chr3 (43 HSPs)
chr3 (1-212)||(8331549-8331773)
chr3 (1-212)||(38449236-38449461)
chr3 (1-212)||(38455723-38455948)
chr3 (94-212)||(10760823-10760936)
chr3 (94-212)||(11839898-11840011)
chr3 (94-212)||(42191393-42191506)
chr3 (94-212)||(42197335-42197448)
chr3 (94-212)||(10769142-10769255)
chr3 (121-186)||(53069253-53069318)
chr3 (94-185)||(17055990-17056079)
chr3 (106-176)||(12108876-12108945)
chr3 (94-160)||(13837547-13837613)
chr3 (94-212)||(10244507-10244620)
chr3 (94-158)||(26429639-26429703)
chr3 (94-210)||(30051277-30051388)
chr3 (94-160)||(10238432-10238498)
chr3 (1-78)||(10238532-10238610)
chr3 (1-78)||(10244654-10244732)
chr3 (1-78)||(10769289-10769367)
chr3 (1-78)||(11840045-11840123)
chr3 (1-78)||(26429737-26429815)
chr3 (1-78)||(42191540-42191618)
chr3 (1-78)||(42197482-42197560)
chr3 (1-78)||(48128359-48128437)
chr3 (1-78)||(49151374-49151452)
chr3 (1-78)||(49157441-49157519)
chr3 (94-212)||(49151485-49151598)
chr3 (94-212)||(49157552-49157665)
chr3 (2-78)||(9760481-9760557)
chr3 (1-78)||(10760970-10761048)
chr3 (94-211)||(13444931-13445046)
chr3 (1-78)||(28964642-28964720)
chr3 (1-74)||(46656442-46656516)
chr3 (2-78)||(13367157-13367233)
chr3 (102-161)||(34300371-34300430)
chr3 (1-78)||(30051421-30051498)
chr3 (94-160)||(55003632-55003695)
chr3 (1-41)||(55003759-55003799)
chr3 (1-83)||(17056108-17056189)
chr3 (102-160)||(48128260-48128318)
chr3 (6-63)||(53069386-53069443)
chr3 (104-212)||(11846236-11846340)
chr3 (1-33)||(23138782-23138814)
[»] chr5 (23 HSPs)
chr5 (94-212)||(7389720-7389833)
chr5 (94-212)||(12686352-12686465)
chr5 (94-212)||(12692454-12692567)
chr5 (94-186)||(30772155-30772247)
chr5 (94-185)||(14610042-14610131)
chr5 (1-78)||(41297041-41297119)
chr5 (94-212)||(32094394-32094507)
chr5 (94-212)||(32097195-32097308)
chr5 (94-181)||(30384586-30384672)
chr5 (1-74)||(7389871-7389945)
chr5 (1-78)||(28525705-28525783)
chr5 (1-78)||(32097342-32097420)
chr5 (94-161)||(19066331-19066398)
chr5 (1-75)||(28531804-28531879)
chr5 (1-78)||(12686498-12686576)
chr5 (1-78)||(12692600-12692678)
chr5 (94-212)||(28525559-28525672)
chr5 (108-160)||(41297170-41297222)
chr5 (102-161)||(19059990-19060049)
chr5 (1-78)||(14609932-14610009)
chr5 (94-212)||(28531655-28531768)
chr5 (1-77)||(32094542-32094619)
chr5 (93-161)||(26318479-26318547)
[»] chr1 (23 HSPs)
chr1 (94-212)||(31057918-31058031)
chr1 (1-212)||(25381708-25381933)
chr1 (1-212)||(25387677-25387902)
chr1 (94-212)||(31051418-31051531)
chr1 (94-161)||(8093065-8093132)
chr1 (1-78)||(1078006-1078084)
chr1 (1-78)||(50305959-50306037)
chr1 (103-216)||(27955042-27955155)
chr1 (97-184)||(34739862-34739947)
chr1 (95-185)||(1078119-1078207)
chr1 (94-161)||(44409874-44409941)
chr1 (1-78)||(31051306-31051384)
chr1 (1-78)||(44409762-44409840)
chr1 (1-78)||(31057806-31057884)
chr1 (1-63)||(34739748-34739810)
chr1 (94-160)||(38152184-38152250)
chr1 (1-85)||(8093159-8093243)
chr1 (94-149)||(24926992-24927047)
chr1 (1-48)||(33458259-33458306)
chr1 (124-212)||(50306093-50306176)
chr1 (5-63)||(38152299-38152356)
chr1 (93-153)||(12183816-12183877)
chr1 (94-150)||(24963939-24963995)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-78)||(14035-14113)
[»] scaffold0208 (4 HSPs)
scaffold0208 (94-212)||(6396-6509)
scaffold0208 (94-212)||(12269-12382)
scaffold0208 (1-78)||(6284-6362)
scaffold0208 (1-78)||(12157-12235)
[»] chr8 (23 HSPs)
chr8 (94-212)||(42993176-42993289)
chr8 (1-212)||(5542333-5542558)
chr8 (94-212)||(32890762-32890875)
chr8 (94-212)||(32896886-32896999)
chr8 (94-212)||(36818845-36818958)
chr8 (95-161)||(42033675-42033741)
chr8 (94-212)||(10705711-10705824)
chr8 (94-185)||(9935152-9935241)
chr8 (3-78)||(22220047-22220123)
chr8 (94-160)||(22219947-22220013)
chr8 (1-78)||(32890650-32890728)
chr8 (1-78)||(32896774-32896852)
chr8 (94-159)||(14417814-14417879)
chr8 (107-212)||(10699916-10700016)
chr8 (94-161)||(39727527-39727594)
chr8 (1-63)||(10699791-10699853)
chr8 (94-161)||(1883038-1883105)
chr8 (1-63)||(39735875-39735936)
chr8 (1-78)||(9935045-9935121)
chr8 (1-85)||(36818734-36818818)
chr8 (18-78)||(42033580-42033641)
chr8 (1-85)||(42993314-42993397)
chr8 (1-41)||(1883200-1883240)
[»] chr2 (33 HSPs)
chr2 (94-212)||(13455973-13456086)
chr2 (94-212)||(13461914-13462027)
chr2 (94-212)||(44716978-44717091)
chr2 (96-212)||(13149857-13149968)
chr2 (94-212)||(30965201-30965314)
chr2 (94-212)||(31002250-31002363)
chr2 (94-167)||(35084892-35084965)
chr2 (94-167)||(35090865-35090938)
chr2 (94-212)||(36750288-36750401)
chr2 (94-161)||(35438924-35438991)
chr2 (1-78)||(13150009-13150087)
chr2 (94-212)||(31008228-31008341)
chr2 (1-78)||(13455861-13455939)
chr2 (1-78)||(13461802-13461880)
chr2 (1-78)||(28683264-28683342)
chr2 (1-78)||(31002138-31002216)
chr2 (1-78)||(35439690-35439768)
chr2 (94-190)||(28683137-28683231)
chr2 (1-77)||(7771508-7771583)
chr2 (94-158)||(19879472-19879536)
chr2 (94-161)||(23343427-23343494)
chr2 (1-75)||(36750176-36750251)
chr2 (1-78)||(31008116-31008194)
chr2 (1-78)||(35084999-35085077)
chr2 (1-78)||(35090972-35091050)
chr2 (94-155)||(11048776-11048837)
chr2 (2-78)||(11048874-11048951)
chr2 (1-78)||(30965089-30965167)
chr2 (1-78)||(44717125-44717203)
chr2 (2-77)||(23284708-23284784)
chr2 (1-62)||(19879356-19879416)
chr2 (2-78)||(23343318-23343394)
chr2 (1-33)||(35442198-35442230)
[»] scaffold0440 (1 HSPs)
scaffold0440 (94-212)||(1367-1480)
[»] scaffold0012 (2 HSPs)
scaffold0012 (94-212)||(173063-173176)
scaffold0012 (1-78)||(173209-173287)
[»] scaffold0363 (1 HSPs)
scaffold0363 (94-159)||(840-905)
[»] scaffold0185 (1 HSPs)
scaffold0185 (101-186)||(5825-5910)
[»] scaffold1114 (2 HSPs)
scaffold1114 (94-161)||(957-1024)
scaffold1114 (13-78)||(837-903)


Alignment Details
Target: chr7 (Bit Score: 110; Significance: 1e-55; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 43539739 - 43539975
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa-gaggttatggtcccccaatata-------------- 85  Q
    |||||||||| |||||||||||||| |||||||||| |||| ||||||||||||||||||||| ||||||||||||||| ||||||                  
T  43539739 agtggatgtctggatgacccattaacggaataacggaaaaccctaatggtcacccaatataaaagaggttatggtcccc-aatataccgtgcacggcaaa 43539837  T
Q  86 -------ttctccttcccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgtttta 178  Q
           ||||||||||||||| ||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||| |    
T  43539838 ctctctcttctccttcccatctgaagagaactttaggcataaaggtactggttgaggaagaaccaaatcagtcgccgctaaccatattttgtgtgtttca 43539937  T
Q  179 gatcatcaactcctctctttgtttatagttgttgttga 216  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  43539938 gatcatcacctcctctctttgtttatcgttgttgttga 43539975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 35150827 - 35150735
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatca 186  Q
    ||||||| |||||||||| |||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  35150827 cccatctgaagagaacttgaggcataaaggtaccggttgaagaataaccaaatcagccgccgctaaccatattttgtgtgtttcagatcatca 35150735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 35148295 - 35148204
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatc 185  Q
    ||||||| ||||||| || ||||||||||||||||||||  ||||||||||||||| ||| ||| |||||||||||||||||| ||||||||    
T  35148295 cccatctgaagagaatttgaggcataaaggtaccggttgaggaagaaccaaatcagccgctgctgaccatattttgtgtgtttcagatcatc 35148204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26383431 - 26383508
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtccc 77  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||||||| |||||||||    
T  26383431 agtggatgtccggatgacccattaatggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccc 26383508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 28421245 - 28421132
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  28421245 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 28421151  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  28421150 tctttggttatcgttgttg 28421132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 339253 - 339373
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  |||||| |||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  339253 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 339347  T
Q  194 tctttgtttatagttgttgttgatga 219  Q
    |||||| ||||  |||||||||||||    
T  339348 tctttggttatcattgttgttgatga 339373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 5979460 - 5979347
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||| ||||||||||  |||||||||||| |||||||||||||  | | |||||||||| |||||||   ||||||    
T  5979460 cccatctgaagagaacttgaggcataaaagtaccggttgaggaagaaccaaattagtcgccgctaac--tctattgtgtgtttcagatcat---ctcctc 5979366  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  5979365 tctttggttatcgttgttg 5979347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 20238824 - 20238937
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||| ||    
T  20238824 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcatc 20238918  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  20238919 tctttggttattgttgttg 20238937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 35152926 - 35152849
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtccc 77  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||||| ||||||| |||||||||    
T  35152926 agtggatgtccggatgacccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccc 35152849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3811566 - 3811488
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| |||||||||| ||||||| ||||||| ||||||||||    
T  3811566 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtcccc 3811488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3817708 - 3817630
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| |||||||||| ||||||| ||||||| ||||||||||    
T  3817708 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtcccc 3817630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 5849403 - 5849492
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcat 184  Q
    ||||||| |||| ||||| ||||||||||||||||||||  ||||||||||||||| ||||||||| ||||| |||||| ||| |||||||    
T  5849403 cccatctgaagataacttgaggcataaaggtaccggttgaggaagaaccaaatcagacgccgctaa-catatgttgtgtatttcagatcat 5849492  T

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Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 3817597 - 3817484
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| |||||||||||||| |||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   || |||    
T  3817597 cccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---cttctc 3817503  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  3817502 tctttggttatcgttgttg 3817484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 351660 - 351749
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatc 185  Q
    ||||||| |||||||||| ||||||||||||||||||||  |||||| |||||||| ||||||||||  | | |||||||||| ||||||||    
T  351660 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaac--tctattgtgtgtttcagatcatc 351749  T

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Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 3811455 - 3811366
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatc 185  Q
    ||||||| |||||||||| |||||||||||||| |||||  ||||||||||||||| ||||||||||  | | |||||||||| ||||||||    
T  3811455 cccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcatc 3811366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 351549 - 351627
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| ||||||| |||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  351549 agtggatgtccggatggcccattactggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 351627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28421356 - 28421278
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  28421356 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 28421278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 15843820 - 15843933
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||| ||||| ||||  ||||||||||||||| ||||||||||  | | ||||||||||  ||||||   ||||||    
T  15843820 cccatctgaagagaacttgaggcataaatgtaccagttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttccgatcat---ctcctc 15843914  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  15843915 tctttggttattgttgttg 15843933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 15860929 - 15861042
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||| ||||| ||||  ||||||||||||||| ||||||||||  | | ||||||||||  ||||||   ||||||    
T  15860929 cccatctgaagagaacttgaggcataaatgtaccagttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttccgatcat---ctcctc 15861023  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  15861024 tctttggttattgttgttg 15861042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22742327 - 22742265
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa 63  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||||||    
T  22742327 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaa 22742265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 339143 - 339226
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccccaatata 85  Q
    |||||||||||||||| ||||||| |||||||| ||||||| ||||||| || ||||||| |||||||| ||||| ||||||||||    
T  339143 agtggatgtccggatggcccattactggaataatgggaaac-ctaatggccatccaatataaaagaggtcatggt-ccccaatata 339226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 22742212 - 22742148
Alignment:
Q  97 atctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    |||| |||||||||| ||||||||||||||| ||||  ||| ||||||||||| |||||||||||    
T  22742212 atctgaagagaacttgaggcataaaggtaccagttgatgaaaaaccaaatcagccgccgctaacc 22742148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 26380960 - 26381023
Alignment:
Q  97 atctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaac 160  Q
    |||| |||| ||||||||||||||||||| | ||||  ||||||||||||||| ||||||||||    
T  26380960 atctgaagaaaactttaggcataaaggtagcagttgaggaagaaccaaatcagccgccgctaac 26381023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7608189 - 7608267
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    ||||||||||||||||||||||||||| ||||| |  |||| ||||||  || ||||||| ||||| ||||||||||||    
T  7608189 agtggatgtccggatgacccattaatgaaataatgaaaaaccctaatgaccatccaatataaaagatgttatggtcccc 7608267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35148406 - 35148328
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| | ||||||  |||||| ||||||||||||||| || ||||||| ||||||| |||| |||||    
T  35148406 agtggatgtccggatggctcattaacagaataatgggaaactctaatggccatccaatataaaagaggctatgatcccc 35148328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 15843734 - 15843783
Alignment:
Q  27 ggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtc 75  Q
    ||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  15843734 ggaataatgggaaactctaatggtcatccaatataaaagaggttatggtc 15843783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 15860843 - 15860892
Alignment:
Q  27 ggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtc 75  Q
    ||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  15860843 ggaataatgggaaactctaatggtcatccaatataaaagaggttatggtc 15860892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 12803893 - 12803941
Alignment:
Q  115 gcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccat 163  Q
    ||||||||||||||||||  |||||||| ||||||||| ||||||||||    
T  12803893 gcataaaggtaccggttgaggaagaacctaatcagtcgtcgctaaccat 12803941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 7608324 - 7608407
Alignment:
Q  102 aagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatc 185  Q
    |||||||||| || ||||||||||||| ||   |||| |||||||||||||||||||| |   || ||||||||| ||||||||    
T  7608324 aagagaacttgagtcataaaggtaccgatttaggaagtaccaaatcagtcgccgctaatccgcttatgtgtgtttcagatcatc 7608407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 5979571 - 5979494
Alignment:
Q  3 tggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaata--taaagaggttatggtcccc 78  Q
    ||||||| |||||| || |||||  |||||| |||||| ||||||||||| ||||||   ||||||||||||||||||    
T  5979571 tggatgttcggatggccaattaacagaataatgggaaagtctaatggtcatccaataataaaagaggttatggtcccc 5979494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 31756616 - 31756384
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa-gaggttatggtcccccaatatat------------- 86  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||| || |||||||||| |||| |||||||||| |||||||                 
T  31756616 agtggatgtccggatgacccattaa-ggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc-aatatatcaaacacgacaaa 31756519  T
Q  87 -----tctccttcccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagat 181  Q
         ||| || ||||||| |||||||||| ||| ||||||||||| ||||  ||||||||||||||| ||||||||||| ||| |||||||||| ||||    
T  31756518 ctctctcttctccccatctgaagagaacttgaggtataaaggtacctgttgaggaagaaccaaatcagccgccgctaaccctatattgtgtgtttcagat 31756419  T
Q  182 catcaactcctctctttgtttatagttgttgttga 216  Q
    ||||| ||||||||| ||| ||| |||| ||||||    
T  31756418 catcacctcctctctctgtgtatggttgctgttga 31756384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 4580719 - 4580494
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc----------------caata 83  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||                |||||    
T  4580719 agtggatgtccggatgacccattaatggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaata 4580620  T
Q  84 tattctc--cttcccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagat 181  Q
       ||||  || ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | ||| |||||| ||||    
T  4580619 ctctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgcgtgtttcagat 4580522  T
Q  182 catcaactcctctctttgtttatagttgttg 212  Q
    |||   |||||||||||| |||| |||||||    
T  4580521 cat---ctcctctctttggttatcgttgttg 4580494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 8651201 - 8650976
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc----------------caata 83  Q
    |||||||||||||||| |||||||| ||||||| ||||||| |||||||||| ||||||| ||||||| ||||||||||                |||||    
T  8651201 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatataccgtacacggcaata 8651102  T
Q  84 tattctc--cttcccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagat 181  Q
       ||||  || ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| ||||    
T  8651101 ctctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagat 8651004  T
Q  182 catcaactcctctctttgtttatagttgttg 212  Q
    |||   |||||||||||| |||| |||||||    
T  8651003 cat---ctcctctctttggttatcgttgttg 8650976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 25343498 - 25343611
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  25343498 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 25343592  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  25343593 tctttggttatcgttgttg 25343611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 25354085 - 25354198
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  25354085 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 25354179  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  25354180 tctttggttatcgttgttg 25354198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 21197316 - 21197249
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    ||||||| |||||||||| |||||||||| |||||||||  ||||||||||||||| |||||||||||    
T  21197316 cccatctgaagagaacttgaggcataaagataccggttgaggaagaaccaaatcagccgccgctaacc 21197249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 21770852 - 21770786
Alignment:
Q  95 ccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    |||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||| |||||||    
T  21770852 ccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgctgctaacc 21770786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25353973 - 25354051
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    ||||||| |||||||| |||||||| ||||||| |||||||||||||||||| | ||||| ||||||| ||||||||||    
T  25353973 agtggatatccggatggcccattaacggaataatgggaaactctaatggtcatctaatataaaagaggctatggtcccc 25354051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12801937 - 12801887
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtc 51  Q
    |||||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  12801937 agtggatgtctggatgacccattaatggaataatgggaaaccctaatggtc 12801887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 21191133 - 21191039
Alignment:
Q  113 aggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctctctttgtttatagttgttg 212  Q
    ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| | |||||   |||||||||||| |||| |||||||    
T  21191133 aggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcatatcat---ctcctctctttggttatcgttgttg 21191039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21197438 - 21197360
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||  ||||||| || ||||||| ||||||| ||||||||||    
T  21197438 agtggatgtccggatggcccattaacggaataatgggaaaacctaatggccatccaatataaaagaggctatggtcccc 21197360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21783723 - 21783662
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa 63  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||| || ||||||||||    
T  21783723 agtggatgtccggatgacccattaacggaataatgggaaaccctaatgg-catccaatataaa 21783662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21789946 - 21789885
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa 63  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||| || ||||||||||    
T  21789946 agtggatgtccggatgacccattaacggaataatgggaaaccctaatgg-catccaatataaa 21789885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 28728047 - 28728123
Alignment:
Q  2 gtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaagaggttatggtcccc 78  Q
    |||||||||||||||  ||||||| ||||||| ||||||| ||||||| || || |||||| |||| ||||||||||    
T  28728047 gtggatgtccggatggtccattaacggaataatgggaaaccctaatggccatcctatataatgaggctatggtcccc 28728123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21770962 - 21770901
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa 63  Q
    ||||||||||||||||| ||||||| ||||||| ||||||| ||||||| || ||||||||||    
T  21770962 agtggatgtccggatga-ccattaacggaataatgggaaaccctaatggccaaccaatataaa 21770901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17581398 - 17581438
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaac 41  Q
    ||||||||||||||||||||||||| ||||||| |||||||    
T  17581398 agtggatgtccggatgacccattaacggaataatgggaaac 17581438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 49976460 - 49976581
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccat-attttgtgtgttttagatcatcaactcct 192  Q
    ||||||| |||||||||| |||||||||| ||||| |||  ||||||||||||||| ||||||||||| | ||||||||||||| ||||||||| |||||    
T  49976460 cccatctgaagagaacttgaggcataaag-taccg-ttgaggaagaaccaaatcagccgccgctaacccttattttgtgtgtttgagatcatcacctcct 49976557  T
Q  193 ctctttgtttatagttgttgttga 216  Q
    |||||||||||| |||||||||||    
T  49976558 ctctttgtttatcgttgttgttga 49976581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 24287860 - 24287973
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  24287860 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 24287954  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  24287955 tctttggttatcgttgttg 24287973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 26957089 - 26957022
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    ||||||| |||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  26957089 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagtcgccgctaacc 26957022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 6257491 - 6257378
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  6257491 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 6257397  T
Q  194 tctttgtttatagttgttg 212  Q
     ||||| |||| |||||||    
T  6257396 actttggttatcgttgttg 6257378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 216
Target Start/End: Complemental strand, 44831897 - 44831781
Alignment:
Q  102 aagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaact--cctctctttg 199  Q
    |||||||||| |||||||||  |||||||||  ||||||||| ||||| || |||||||| |||||||||||||| ||||||||| ||   |||||| ||    
T  44831897 aagagaacttgaggcataaaaataccggttgaggaagaaccacatcagccgtcgctaaccctattttgtgtgtttcagatcatcaccttctctctctctg 44831798  T
Q  200 tttatagttgttgttga 216  Q
    ||||| |||||||||||    
T  44831797 tttatcgttgttgttga 44831781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 48160833 - 48160946
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| |||||||||||||| |||||  |||||||||||| |||||||||||||  | | |||||||||| |||||||   ||||||    
T  48160833 cccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaattagtcgccgctaac--tctattgtgtgtttcagatcat---ctcctc 48160927  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  48160928 tctttggttatcgttgttg 48160946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 48167052 - 48167165
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| |||||||||||||| |||||  |||||||||||| |||||||||||||  | | |||||||||| |||||||   ||||||    
T  48167052 cccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaattagtcgccgctaac--tctattgtgtgtttcagatcat---ctcctc 48167146  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  48167147 tctttggttatcgttgttg 48167165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10739734 - 10739658
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaagaggttatggtcccc 78  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||| || ||||||| |||||| ||||||||||    
T  10739734 agtggatgtccggatgacccattaacggaataatgggaaaccctaatggccatccaatat-aagaggctatggtcccc 10739658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10953503 - 10953427
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaagaggttatggtcccc 78  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||| || ||||||| |||||| ||||||||||    
T  10953503 agtggatgtccggatgacccattaacggaataatgggaaaccctaatggccatccaatat-aagaggctatggtcccc 10953427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24287749 - 24287811
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa 63  Q
    |||||||||||||||| |||||||| ||||||| ||||||| |||||||||| ||||||||||    
T  24287749 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccaatataaa 24287811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 4632252 - 4632333
Alignment:
Q  91 cttcccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgt 172  Q
    |||| ||||| |||||||||| |||||||||| |||||||||  |||||||||||||||  ||||||||| || ||||||||    
T  4632252 cttctcatctgaagagaacttgaggcataaagataccggttgaggaagaaccaaatcagaagccgctaactatgttttgtgt 4632333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10733747 - 10733671
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| |||||| ||||||||||    
T  10733747 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatat-aagaggctatggtcccc 10733671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 10739625 - 10739512
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| ||||||| || ||||||||||||| ||||||  ||||||||||||||| ||||||||||  | | |||||||||| | |||||   ||||||    
T  10739625 cccatctgaagagaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcaaatcat---ctcctc 10739531  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  10739530 tctttggttatcgttgttg 10739512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10947516 - 10947440
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| |||||| ||||||||||    
T  10947516 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatat-aagaggctatggtcccc 10947440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 10953394 - 10953281
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| ||||||| || ||||||||||||| ||||||  ||||||||||||||| ||||||||||  | | |||||||||| | |||||   ||||||    
T  10953394 cccatctgaagagaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcaaatcat---ctcctc 10953300  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  10953299 tctttggttatcgttgttg 10953281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 33458553 - 33458440
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||| ||||||   |||||||||||||| ||||||||||  | | |||||||||| |||||||   ||| ||    
T  33458553 cccatctgaagagaacttgaggcataaaggtatcggttgagaaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcatc 33458459  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  33458458 tctttggttatcgttgttg 33458440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 33461678 - 33461565
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| || ||||||| ||||||||||||||||||||  |||||| |||||||| ||||||||||  | | |||||||||| |||||||   ||| ||    
T  33461678 cccatctgaaaagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcatc 33461584  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  33461583 tctttgattatcgttgttg 33461565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 10733638 - 10733525
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| ||||||| || ||||||||||||| ||||||  ||||||||||||||| || |||||||  | | |||||||||| | |||||   ||||||    
T  10733638 cccatctgaagagaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgtcgctaac--tctattgtgtgtttcaaatcat---ctcctc 10733544  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  10733543 tctttggttatcgttgttg 10733525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 10947407 - 10947294
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| ||||||| || ||||||||||||| ||||||  ||||||||||||||| || |||||||  | | |||||||||| | |||||   ||||||    
T  10947407 cccatctgaagagaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgtcgctaac--tctattgtgtgtttcaaatcat---ctcctc 10947313  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  10947312 tctttggttatcgttgttg 10947294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26957201 - 26957123
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| | |||||| ||||||| ||||||| ||||||| || | ||||| ||||||| ||||||||||    
T  26957201 agtggatgtccggatggctcattaacggaataatgggaaaccctaatggccatcaaatataaaagaggctatggtcccc 26957123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 44832012 - 44831928
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccccaatata 85  Q
    |||| |||||||||||  ||||||| |||||||  |||||| |||||||||| ||||||| ||||||| |||||| ||||||||||    
T  44832012 agtgcatgtccggatggtccattaacggaataattggaaaccctaatggtcatccaatataaaagaggctatggt-ccccaatata 44831928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 33461787 - 33461711
Alignment:
Q  3 tggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||| || |||| ||||||| || ||| ||| ||||||| ||||||| ||||||||||    
T  33461787 tggatgtccggatgactcattaacgggataatgggaaaccctgatgatcatccaatataaaagaggctatggtcccc 33461711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 50168357 - 50168435
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||| ||| |||||||||||| | ||||| || |||| ||||||||||  |||||| ||||||| ||||||||||    
T  50168357 agtggatgaccgaatgacccattaacgaaataatggaaaaccctaatggtcattcaatataaaagaggctatggtcccc 50168435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 32284555 - 32284619
Alignment:
Q  96 catctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaac 160  Q
    ||||| |||| ||||| |||| ||||||||||| | |  |||||||||||||||||||| |||||    
T  32284555 catctgaagaaaacttgaggcctaaaggtaccgatcgaggaagaaccaaatcagtcgccactaac 32284619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 50168469 - 50168532
Alignment:
Q  95 ccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaa 159  Q
    |||||| |||||||||| ||||||||||||||| ||||  ||||||| ||||||  |||||||||    
T  50168469 ccatctgaagagaacttgaggcataaaggtacc-gttgaggaagaactaaatcaaccgccgctaa 50168532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 8331549 - 8331773
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa-gaggttatggtcccc----------------caata 83  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||| |||| ||||||||||                |||      
T  8331549 agtggatgtccggatgacccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatacactgtacacggcaaac 8331648  T
Q  84 tat-tctccttcccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatc 182  Q
    | | ||| || ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | ||||||||||||||||    
T  8331649 tctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgttttagatc 8331746  T
Q  183 atcaactcctctctttgtttatagttgttg 212  Q
    ||   |||||||||||| |||| |||||||    
T  8331747 at---ctcctctctttggttatcgttgttg 8331773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 38449461 - 38449236
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa-gaggttatggtcccc----------------caata 83  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||| |||| ||||||||||                |||||    
T  38449461 agtggatgtccggatgacccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatataccgtacacggcaata 38449362  T
Q  84 tattctc--cttcccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagat 181  Q
       ||||  || ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| ||||    
T  38449361 ctctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagat 38449264  T
Q  182 catcaactcctctctttgtttatagttgttg 212  Q
    |||   |||||||||||| |||| |||||||    
T  38449263 cat---ctcctctctttggttatcgttgttg 38449236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 38455948 - 38455723
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa-gaggttatggtcccc----------------caata 83  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||| |||| ||||||||||                |||||    
T  38455948 agtggatgtccggatgacccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatataccgtacacggcaata 38455849  T
Q  84 tattctc--cttcccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagat 181  Q
       ||||  || ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| ||||    
T  38455848 ctctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagat 38455751  T
Q  182 catcaactcctctctttgtttatagttgttg 212  Q
    |||   |||||||||||| |||| |||||||    
T  38455750 cat---ctcctctctttggttatcgttgttg 38455723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 10760936 - 10760823
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| |||||||||||||| |||||  ||||||||||||||||||||||||||  | | |||||||||| |||||||   ||||||    
T  10760936 cccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagtcgccgctaac--tctattgtgtgtttcagatcat---ctcctc 10760842  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  10760841 tctttggttatcgttgttg 10760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 11840011 - 11839898
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  11840011 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 11839917  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  11839916 tctttggttatcgttgttg 11839898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 42191506 - 42191393
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| | ||||||||  | | |||||||||| |||||||   ||||||    
T  42191506 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccaccgctaac--tctattgtgtgtttcagatcat---ctcctc 42191412  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| ||||||||||||    
T  42191411 tctttggttatagttgttg 42191393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 42197448 - 42197335
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| | ||||||||  | | |||||||||| |||||||   ||||||    
T  42197448 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccaccgctaac--tctattgtgtgtttcagatcat---ctcctc 42197354  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| ||||||||||||    
T  42197353 tctttggttatagttgttg 42197335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 10769255 - 10769142
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||| ||| |||||||   ||||||    
T  10769255 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtatttcagatcat---ctcctc 10769161  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  10769160 tctttggttatcgttgttg 10769142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 53069318 - 53069253
Alignment:
Q  121 aggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatca 186  Q
    ||||||||||||  ||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  53069318 aggtaccggttgaggaagaaccaaatcagccgccgctaaccatattttgtgtgtttcagatcatca 53069253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 17056079 - 17055990
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatc 185  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| ||||||||    
T  17056079 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcatc 17055990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 12108945 - 12108876
Alignment:
Q  106 gaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttt 176  Q
    |||||| |||||||||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||||    
T  12108945 gaacttgaggcataaaggtaccggttaaagaagaaccaaatcagtcgccgctaacc-tatgttgtgtgttt 12108876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 13837547 - 13837613
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaac 160  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  13837547 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 13837613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 10244620 - 10244507
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||| ||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| | |||||   ||||||    
T  10244620 cccatctgaagagaacttgaggcataaatgtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcatatcat---ctcctc 10244526  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  10244525 tctttggttatcgttgttg 10244507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 26429703 - 26429639
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgcta 158  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||    
T  26429703 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgcta 26429639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 30051388 - 30051277
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  |||||| |||||||| || |||||||  | | |||||||||| |||||||   ||||||    
T  30051388 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgtcgctaac--tctattgtgtgtttcagatcat---ctcctc 30051294  T
Q  194 tctttgtttatagttgt 210  Q
    |||||| |||| |||||    
T  30051293 tctttggttattgttgt 30051277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 10238498 - 10238432
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaac 160  Q
    ||||||| |||||||||| ||||||||| ||||||||||  ||||||||||||||| ||||||||||    
T  10238498 cccatctgaagagaacttgaggcataaatgtaccggttgaggaagaaccaaatcagccgccgctaac 10238432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10238610 - 10238532
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  10238610 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 10238532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10244732 - 10244654
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  10244732 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 10244654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10769367 - 10769289
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  10769367 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 10769289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11840123 - 11840045
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  11840123 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 11840045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26429815 - 26429737
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| |||||||||| ||| ||| ||||||| ||||||||||    
T  26429815 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccagtataaaagaggctatggtcccc 26429737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42191618 - 42191540
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  42191618 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 42191540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42197560 - 42197482
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  42197560 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 42197482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 48128437 - 48128359
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    ||||||||||||||||||||||||| ||||||| || ||||  ||||||||| ||||||| ||||||| ||||||||||    
T  48128437 agtggatgtccggatgacccattaacggaataatggaaaaccttaatggtcatccaatataaaagaggctatggtcccc 48128359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49151374 - 49151452
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  49151374 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 49151452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49157441 - 49157519
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  49157441 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 49157519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 49151485 - 49151598
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||| | ||||||||||||||||||||  |||||| |||||||| | ||||||||  | | |||||||||| |||||||   ||||||    
T  49151485 cccatctgaagagaacgtgaggcataaaggtaccggttgaggaagaatcaaatcagccaccgctaac--tctattgtgtgtttcagatcat---ctcctc 49151579  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  49151580 tctttggttatcgttgttg 49151598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 49157552 - 49157665
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||| | ||||||||||||||||||||  |||||| |||||||| | ||||||||  | | |||||||||| |||||||   ||||||    
T  49157552 cccatctgaagagaacgtgaggcataaaggtaccggttgaggaagaatcaaatcagccaccgctaac--tctattgtgtgtttcagatcat---ctcctc 49157646  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  49157647 tctttggttatcgttgttg 49157665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 9760481 - 9760557
Alignment:
Q  2 gtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaagaggttatggtcccc 78  Q
    ||||||||| |||||  ||||||| |||||||  |||||| |||||||||| |||||||||||||| ||||||||||    
T  9760481 gtggatgtctggatggtccattaaaggaataataggaaaccctaatggtcatccaatataaagaggatatggtcccc 9760557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10761048 - 10760970
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||  || ||||||| ||||||| ||||||||||    
T  10761048 agtggatgtccggatggcccattaacggaataatgggaaaccctaatgaccatccaatataaaagaggctatggtcccc 10760970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 13444931 - 13445046
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||| ||| ||||||  ||||||||||||||| |||| |||||| | |||  |||| || |||||||||  ||  |    
T  13444931 cccatctgaagagaacttgaggcataaaagtatcggttgaggaagaaccaaatcagccgccactaaccctgttt--tgtggttcagatcatcacatctcc 13445028  T
Q  194 tctttgtttatagttgtt 211  Q
    ||||||||||| ||||||    
T  13445029 tctttgtttatggttgtt 13445046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28964642 - 28964720
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    ||||||||||||||||  ||||||| ||||||| | ||||| |||||||||| ||||||| ||||||| ||||||||||    
T  28964642 agtggatgtccggatggtccattaacggaataatgagaaaccctaatggtcatccaatataaaagaggctatggtcccc 28964720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 46656442 - 46656516
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggt 74  Q
    ||||||||||||||||||| ||||| ||||||| ||||||| ||| |||| | ||||||| ||||||||||||||    
T  46656442 agtggatgtccggatgacctattaacggaataatgggaaaccctattggttatccaatataaaagaggttatggt 46656516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 13367233 - 13367157
Alignment:
Q  2 gtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaagaggttatggtcccc 78  Q
    ||||||||| |||||  ||||||| ||||||| ||||||| ||||||  || |||||||||||||| ||||||||||    
T  13367233 gtggatgtctggatggtccattaacggaataatgggaaaccctaatgaccatccaatataaagaggctatggtcccc 13367157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 34300371 - 34300430
Alignment:
Q  102 aagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    |||||||||| |||||| || |||||||||| |||| |||||||| ||||||||||||||    
T  34300371 aagagaacttgaggcatgaaagtaccggttgaagaataaccaaataagtcgccgctaacc 34300430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30051498 - 30051421
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| |||||||  |||||| ||||||| || ||||||| ||||||| ||||||||||    
T  30051498 agtggatgtccggatggcccattaacggaataa-tggaaaccctaatggccatccaatataaaagaggctatggtcccc 30051421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 55003695 - 55003632
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaac 160  Q
    ||||||| |||||||||| |||||||||||||||| ||   || |||||||||||| ||||||||||    
T  55003695 cccatctgaagagaacttgaggcataaaggtaccgatt---gaggaaccaaatcagccgccgctaac 55003632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 55003799 - 55003759
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaac 41  Q
    ||||||||||||||||||||||||| ||||||| |||||||    
T  55003799 agtggatgtccggatgacccattaacggaataatgggaaac 55003759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 17056189 - 17056108
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccccaata 83  Q
    |||||||||||||||| || ||||| ||||||| ||||||| ||||||| || ||||||| ||||||| |||||| ||||||||    
T  17056189 agtggatgtccggatg-cctattaacggaataatgggaaaccctaatggacatccaatataaaagaggctatggt-ccccaata 17056108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 48128318 - 48128260
Alignment:
Q  102 aagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaac 160  Q
    |||||||||  ||||||||||||||| ||||  ||||||||||||||| ||| ||||||    
T  48128318 aagagaactaaaggcataaaggtaccagttgaggaagaaccaaatcagccgctgctaac 48128260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 53069443 - 53069386
Alignment:
Q  6 atgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa 63  Q
    ||||||||||||||||||||  |||||| ||||||| |||||| ||  ||||||||||    
T  53069443 atgtccggatgacccattaacagaataatgggaaaccctaatgatcgtccaatataaa 53069386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 11846340 - 11846236
Alignment:
Q  104 gagaactttaggcataaaggtaccggttggagaagaacc-aaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctctctttgttt 202  Q
    ||||||||  ||||||||||| |||||||  |||||||| ||||||| ||||||||||  | | |||||||||| |||||||   || ||||||||| ||    
T  11846340 gagaacttgcggcataaaggttccggttgaggaagaaccaaaatcagccgccgctaac--tctattgtgtgtttcagatcat---cttctctctttggtt 11846246  T
Q  203 atagttgttg 212  Q
    || |||||||    
T  11846245 atcgttgttg 11846236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23138814 - 23138782
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataa 33  Q
    ||||||||||||||||||||||||| |||||||    
T  23138814 agtggatgtccggatgacccattaacggaataa 23138782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 7389833 - 7389720
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||  | | |||||||||| |||||||   ||||||    
T  7389833 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagtcgccgctaac--tctattgtgtgtttcagatcat---ctcctc 7389739  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  7389738 tctttggttatcgttgttg 7389720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 12686465 - 12686352
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  12686465 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 12686371  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  12686370 tctttggttatcgttgttg 12686352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 12692567 - 12692454
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  12692567 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 12692473  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  12692472 tctttggttatcgttgttg 12692454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 30772155 - 30772247
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatca 186  Q
    ||||||| |||||||||| ||||||||||||||||||||  |||||| |||||||| ||||||||||| | | |||||||||| |||||||||    
T  30772155 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaaccctttgttgtgtgtttcagatcatca 30772247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 14610042 - 14610131
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatc 185  Q
    ||||||| |||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||   |||||| ||||| ||||||||    
T  14610042 cccatctgaagagaactttaggcataaaagtaccggttgaggaagaaccaaatcagccgccgctaacc--cttttgtttgtttcagatcatc 14610131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41297041 - 41297119
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||||||||||||  |||||| ||||||| |||||||||| ||||||| ||||||| ||||||||||    
T  41297041 agtggatgtccggatgacccattaacagaataatgggaaaccctaatggtcatccaatataaaagaggctatggtcccc 41297119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 32094507 - 32094394
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  |||||||||||| || ||||||||||  | | |||||||||| |||||||   || |||    
T  32094507 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaattagccgccgctaac--tctattgtgtgtttcagatcat---cttctc 32094413  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  32094412 tctttggttattgttgttg 32094394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 32097308 - 32097195
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||| ||||||| ||||||||||  | | |||||||||| |||||||   ||| ||    
T  32097308 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaactaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcatc 32097214  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  32097213 tctttggttatcgttgttg 32097195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 30384672 - 30384586
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagat 181  Q
    ||||||| |||||||||  ||| ||||||||||||||||  ||||||||||||||||||||||||| | ||| |||||||||| ||||    
T  30384672 cccatctgaagagaactcgaggtataaaggtaccggttgaggaagaaccaaatcagtcgccgctaagc-tatgttgtgtgtttcagat 30384586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7389945 - 7389871
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggt 74  Q
    ||||||||| ||||||||||||||| ||||||| ||||||||||||||| || ||||||| ||||||| ||||||    
T  7389945 agtggatgttcggatgacccattaacggaataatgggaaactctaatggccatccaatataaaagaggctatggt 7389871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28525783 - 28525705
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  28525783 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 28525705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32097420 - 32097342
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  32097420 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 32097342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 19066398 - 19066331
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    ||||||| |||||||||| ||||||||||||||||||||  |||||| ||||||||  ||||||||||    
T  19066398 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagctgccgctaacc 19066331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 28531879 - 28531804
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtc 75  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| |||||||    
T  28531879 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtc 28531804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12686576 - 12686498
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || | ||||| ||||||| ||||||||||    
T  12686576 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatcaaatataaaagaggctatggtcccc 12686498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12692678 - 12692600
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || | ||||| ||||||| ||||||||||    
T  12692678 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatcaaatataaaagaggctatggtcccc 12692600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 28525672 - 28525559
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||| | ||||||||||||||||||||  |||||| |||||||| | ||||| ||  | | |||||||||| |||||||   ||||||    
T  28525672 cccatctgaagagaacgtgaggcataaaggtaccggttgaggaagaatcaaatcagccaccgctgac--tctattgtgtgtttcagatcat---ctcctc 28525578  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  28525577 tctttggttatcgttgttg 28525559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 41297170 - 41297222
Alignment:
Q  108 actttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaac 160  Q
    |||| ||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  41297170 acttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 41297222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 19060049 - 19059990
Alignment:
Q  102 aagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    |||||||||| ||||||||| ||||| ||||  ||||||||||||||| |||||||||||    
T  19060049 aagagaacttgaggcataaaagtaccagttgaggaagaaccaaatcagccgccgctaacc 19059990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14609932 - 14610009
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| |||||||  |||||| |||||||||| | ||| | ||||||||||||||||||    
T  14609932 agtggatgtccggatggcccattaacggaataa-tggaaaccctaatggtcatctaatgtaaaagaggttatggtcccc 14610009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 28531768 - 28531655
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||| | |||||||||||||| |||||  |||||| |||||||| | ||||| ||  | | |||||||||| |||||||   ||||||    
T  28531768 cccatctgaagagaacgtgaggcataaaggtactggttgaggaagaatcaaatcagccaccgctgac--tctattgtgtgtttcagatcat---ctcctc 28531674  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  28531673 tctttggttatcgttgttg 28531655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32094619 - 32094542
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtccc 77  Q
    |||| ||||||||||| |||||||| ||||||| ||||||| ||||||| || | ||||| ||||||| |||||||||    
T  32094619 agtgtatgtccggatggcccattaacggaataatgggaaaccctaatggccatctaatataaaagaggctatggtccc 32094542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 26318547 - 26318479
Alignment:
Q  93 tcccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    |||||||| ||||||||||  || ||||| ||||||||||   ||||||||||||| | ||||||||||    
T  26318547 tcccatctgaagagaacttatggtataaatgtaccggttgagaaagaaccaaatcaattgccgctaacc 26318479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 31057918 - 31058031
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||  | | ||||||||||||||||||   ||||||    
T  31057918 cccatctgaagagaacttgaggcataaaggtaccggttaaggaagaaccaaatcagtcgccgctaac--tctattgtgtgttttagatcat---ctcctc 31058012  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  31058013 tctttggttatcgttgttg 31058031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 25381933 - 25381708
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc----------------caata 83  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||                |||||    
T  25381933 agtggatgtccggatggcccattaatggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaata 25381834  T
Q  84 tattctc--cttcccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagat 181  Q
       ||||  || ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| ||||    
T  25381833 ctctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagat 25381736  T
Q  182 catcaactcctctctttgtttatagttgttg 212  Q
    |||   |||||||||||| |||| |||||||    
T  25381735 cat---ctcctctctttggttatcgttgttg 25381708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 25387902 - 25387677
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc----------------caata 83  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||                |||||    
T  25387902 agtggatgtccggatggcccattaatggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatataccgtacacggcaata 25387803  T
Q  84 tattctc--cttcccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagat 181  Q
       ||||  || ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| ||||    
T  25387802 ctctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagat 25387705  T
Q  182 catcaactcctctctttgtttatagttgttg 212  Q
    |||   |||||||||||| |||| |||||||    
T  25387704 cat---ctcctctctttggttatcgttgttg 25387677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 31051418 - 31051531
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| |||||||||||||||||||   ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  31051418 cccatctgaagagaacttgaggcataaaggtaccggttaaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 31051512  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  31051513 tctttggttatcgttgttg 31051531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 8093132 - 8093065
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  8093132 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaacc 8093065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1078006 - 1078084
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  1078006 agtggatgtccggatgacccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 1078084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 50305959 - 50306037
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| |||||||||| ||||||| ||||||| ||||||||||    
T  50305959 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtcccc 50306037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 27955042 - 27955155
Alignment:
Q  103 agagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctctctttgttt 202  Q
    ||||||||| || |||||||||||||||||  ||| ||| |||||||||| || ||||  | | |||||||||| |||||||||  |||||||||| |||    
T  27955042 agagaacttaagacataaaggtaccggttgaggaataactaaatcagtcgtcgttaacattttgttgtgtgtttcagatcatcacatcctctctttcttt 27955141  T
Q  203 atagttgttgttga 216  Q
    || |||||||||||    
T  27955142 atcgttgttgttga 27955155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 34739862 - 34739947
Alignment:
Q  97 atctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcat 184  Q
    |||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||    
T  34739862 atctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat 34739947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 1078119 - 1078207
Alignment:
Q  95 ccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatc 185  Q
    |||||| |||||||||| ||||||||||||||||||||  |||||||||||||||  |||||||||  | | |||||||||| ||||||||    
T  1078119 ccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagcggccgctaac--tctattgtgtgtttcagatcatc 1078207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 44409874 - 44409941
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    ||||||| |||||||||| |||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  44409874 cccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaacc 44409941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31051306 - 31051384
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  31051306 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 31051384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44409762 - 44409840
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| | ||||| ||||||| || ||||||| ||||||||||||||||||    
T  44409762 agtggatgtccggatggcccattaacggaataatgagaaaccctaatggccatccaatataaaagaggttatggtcccc 44409840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31057806 - 31057884
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||  |||||| ||||||| |||| |||||    
T  31057806 agtggatgtccggatgacccattaacggaataatgggaaaccctaatggccatacaatataaaagaggctatgatcccc 31057884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34739748 - 34739810
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa 63  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||||||    
T  34739748 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaa 34739810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 38152250 - 38152184
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaac 160  Q
    |||||||||||| ||||| | |||||||||||||||||| ||||||||||||| ||  |||||||||    
T  38152250 cccatctaaagaaaacttgaagcataaaggtaccggttgaagaagaaccaaattagctgccgctaac 38152184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8093243 - 8093159
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccccaatata 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||| | ||| | ||||| ||||||| |||||| ||||||||||    
T  8093243 agtggatgtccggatgacccattaacggaataatgggaaaccctaacgatcatcaaatataaaagaggctatggt-ccccaatata 8093159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 24927047 - 24926992
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcag 149  Q
    ||||||| |||||||||| ||||||| ||||||||||||  |||||||||||||||    
T  24927047 cccatctgaagagaacttgaggcatataggtaccggttgaggaagaaccaaatcag 24926992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33458306 - 33458259
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatg 48  Q
    ||||||||||||||||| ||||||||| ||||||| ||||| ||||||    
T  33458306 agtggatgtccggatgatccattaatgaaataacgagaaaccctaatg 33458259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 50306093 - 50306176
Alignment:
Q  124 taccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctctctttgtttatagttgttg 212  Q
    |||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   |||||||||||| |||| |||||||    
T  50306093 taccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctctctttggttatcgttgttg 50306176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 38152356 - 38152299
Alignment:
Q  5 gatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa 63  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||||  || ||||||||||    
T  38152356 gatgtccggatgacccattaacggaataatgggaaac-ctaatgaccatccaatataaa 38152299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 12183877 - 12183816
Alignment:
Q  93 tcccatctaaa-gagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgc 153  Q
    ||||||||||| |||||||| ||||||||||||| ||||||   || |||||||||||||||    
T  12183877 tcccatctaaaagagaacttgaggcataaaggtagcggttgagaaataaccaaatcagtcgc 12183816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 24963995 - 24963939
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagt 150  Q
    ||||||| ||||| |||| ||||||||| |||| |||||  ||||||||||||||||    
T  24963995 cccatctgaagaggacttgaggcataaatgtactggttgaggaagaaccaaatcagt 24963939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14035 - 14113
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||    
T  14035 agtggatgtccggatgacccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtcccc 14113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 54; Significance: 4e-22; HSPs: 4)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 6396 - 6509
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  6396 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 6490  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  6491 tctttggttatcgttgttg 6509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 12269 - 12382
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  12269 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 12363  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  12364 tctttggttatcgttgttg 12382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6284 - 6362
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  6284 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 6362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12157 - 12235
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  12157 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 12235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 42993289 - 42993176
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  42993289 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 42993195  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  42993194 tctttggttatcgttgttg 42993176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 5542558 - 5542333
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc----------------caata 83  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||                |||||    
T  5542558 agtggatgtccggatgacccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacaccgtacacggcaata 5542459  T
Q  84 tattctc--cttcccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagat 181  Q
       ||||  || ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| ||||    
T  5542458 ctctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagat 5542361  T
Q  182 catcaactcctctctttgtttatagttgttg 212  Q
    |||   |||| ||||||| |||| |||||||    
T  5542360 cat---ctcccctctttggttatcgttgttg 5542333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 32890762 - 32890875
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||| ||    
T  32890762 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcatc 32890856  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  32890857 tctttggttattgttgttg 32890875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 32896886 - 32896999
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||| ||    
T  32896886 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcatc 32896980  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  32896981 tctttggttattgttgttg 32896999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 36818845 - 36818958
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| | |||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  36818845 cccatctgatgagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 36818939  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  36818940 tctttggttatcgttgttg 36818958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 42033675 - 42033741
Alignment:
Q  95 ccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    |||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  42033675 ccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaacc 42033741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 10705711 - 10705824
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| || |||||||||||||||||  |||||| |||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  10705711 cccatctgaagagaacttaagccataaaggtaccggttgaggaagaatcaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 10705805  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  10705806 tctttggttatcgttgttg 10705824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 9935152 - 9935241
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatc 185  Q
    ||||||| |||||||||| |||||||||||||||| |||  ||||||||||||||| |||||||||  || | |||||||||| ||||||||    
T  9935152 cccatctgaagagaacttgaggcataaaggtaccgattgaggaagaaccaaatcagccgccgctaa--atctattgtgtgtttcagatcatc 9935241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 22220123 - 22220047
Alignment:
Q  3 tggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||| |||||||| ||||||| ||||||| |||||||||| ||||||| ||||||| ||||||||||    
T  22220123 tggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtcccc 22220047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 22220013 - 22219947
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaac 160  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| |||| |||||    
T  22220013 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccactaac 22219947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32890650 - 32890728
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  32890650 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 32890728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32896774 - 32896852
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  32896774 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 32896852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 14417814 - 14417879
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaa 159  Q
    ||||||| |||||||||| ||||||||| ||||||||||  ||||||||||||||| |||||||||    
T  14417814 cccatctgaagagaacttgaggcataaacgtaccggttgaggaagaaccaaatcagccgccgctaa 14417879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 10699916 - 10700016
Alignment:
Q  107 aactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctctctttgtttatag 206  Q
    ||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||    ||||||||||| |||| |    
T  10699916 aacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ttcctctctttggttatcg 10700010  T
Q  207 ttgttg 212  Q
    ||||||    
T  10700011 ttgttg 10700016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 39727594 - 39727527
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    ||||||| ||||| |||| ||||||||||||||||||||  |||||||||||||||  ||||||||||    
T  39727594 cccatctcaagagtacttgaggcataaaggtaccggttgaggaagaaccaaatcagcagccgctaacc 39727527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10699791 - 10699853
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa 63  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| |||||||||| | ||||||||    
T  10699791 agtggatgtccggatgacccattaacggagtaatgggaaaccctaatggtcatcaaatataaa 10699853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 1883105 - 1883038
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    ||||||| |||||||||| || ||||||||||| |||||  |||||||||||| || |||||||||||    
T  1883105 cccatctgaagagaacttgagacataaaggtactggttgaggaagaaccaaattagccgccgctaacc 1883038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39735936 - 39735875
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa 63  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||| || | ||||||||    
T  39735936 agtggatgtccggatgacccattaacggaataa-gggaaaccctaatggccatctaatataaa 39735875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9935045 - 9935121
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaagaggttatggtcccc 78  Q
    ||||||| ||||||||||||||||| ||||||| ||||||| ||||||| || ||||   ||||||| ||||||||||    
T  9935045 agtggatatccggatgacccattaacggaataatgggaaac-ctaatggccatccaaataaaagaggctatggtcccc 9935121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 36818734 - 36818818
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccccaatata 85  Q
    |||||||||||||||| |||||||| ||||||| ||||||| |||||||  | | ||||| ||||||| |||||| ||||||||||    
T  36818734 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggctatcaaatataaaagaggctatggt-ccccaatata 36818818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 42033580 - 42033641
Alignment:
Q  18 cccattaatggaataacgggaaactctaatggtcacccaatataaa-gaggttatggtcccc 78  Q
    |||||||| ||||||| ||||||| |||||||||| |||||||||| |||| ||||||||||    
T  42033580 cccattaacggaataatgggaaaccctaatggtcatccaatataaaggaggctatggtcccc 42033641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 42993397 - 42993314
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaa-gaggttatggtcccccaatata 85  Q
    |||||||||||| ||| |||||||| ||||||| ||||||| ||||| | || |||||||||| ||||||||||| ||||||||||    
T  42993397 agtggatgtccg-atggcccattaacggaataatgggaaaccctaatcgccatccaatataaaagaggttatggt-ccccaatata 42993314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1883240 - 1883200
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaac 41  Q
    ||||||||||||||||||||||||| | ||||| |||||||    
T  1883240 agtggatgtccggatgacccattaacgaaataatgggaaac 1883200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 13455973 - 13456086
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| | ||||||||  | | |||||||||| |||||||   ||||||    
T  13455973 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccaccgctaac--tctattgtgtgtttcagatcat---ctcctc 13456067  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| ||||||||||||    
T  13456068 tctttggttatagttgttg 13456086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 13461914 - 13462027
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| | ||||||||  | | |||||||||| |||||||   ||||||    
T  13461914 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccaccgctaac--tctattgtgtgtttcagatcat---ctcctc 13462008  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| ||||||||||||    
T  13462009 tctttggttatagttgttg 13462027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 44717091 - 44716978
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  44717091 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 44716997  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  44716996 tctttggttatcgttgttg 44716978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 13149968 - 13149857
Alignment:
Q  96 catctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctctc 195  Q
    ||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||||    
T  13149968 catctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctctc 13149874  T
Q  196 tttgtttatagttgttg 212  Q
    |||| |||| |||||||    
T  13149873 tttggttatcgttgttg 13149857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 30965201 - 30965314
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||||  | | |||||||||| |||||||   ||| ||    
T  30965201 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaattagtcgccgctaac--tctattgtgtgtttcagatcat---ctcatc 30965295  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  30965296 tctttggttatcgttgttg 30965314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 31002250 - 31002363
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||||  | | |||||||||| |||||||   ||||||    
T  31002250 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaattagtcgccgctaac--tctattgtgtgtttcagatcat---ctcctc 31002344  T
Q  194 tctttgtttatagttgttg 212  Q
    | |||| |||| |||||||    
T  31002345 tttttggttatcgttgttg 31002363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 35084965 - 35084892
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattt 167  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||| |||||    
T  35084965 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaaccctattt 35084892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 35090938 - 35090865
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattt 167  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||| |||||    
T  35090938 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaaccctattt 35090865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 36750288 - 36750401
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| |||||||||| |||||||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   ||||||    
T  36750288 cccatctgaagagaacttgaggcataaagataccggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---ctcctc 36750382  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  36750383 tctttggttatcgttgttg 36750401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 35438991 - 35438924
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  35438991 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaacc 35438924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13150087 - 13150009
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    ||||||||| ||||||||||||||| ||||||| ||||||| |||||||||| | ||||| ||||||||||||||||||    
T  13150087 agtggatgtacggatgacccattaacggaataatgggaaaccctaatggtcatctaatataaaagaggttatggtcccc 13150009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 31008228 - 31008341
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||| ||||||||||  |||||||||||| |||||||||||||  | | |||||||||| |||||||   ||||||    
T  31008228 cccatctgaagagaacttgaggcataaaagtaccggttgaggaagaaccaaattagtcgccgctaac--tctattgtgtgtttcagatcat---ctcctc 31008322  T
Q  194 tctttgtttatagttgttg 212  Q
    | |||| |||| |||||||    
T  31008323 tttttggttatcgttgttg 31008341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13455861 - 13455939
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  13455861 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 13455939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13461802 - 13461880
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  13461802 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 13461880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28683342 - 28683264
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  28683342 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 28683264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31002138 - 31002216
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    ||||||||||||||||||||||||| ||||||| |||||||  |||||| || ||||||| ||||||| ||||||||||    
T  31002138 agtggatgtccggatgacccattaacggaataatgggaaaccataatggccatccaatataaaagaggctatggtcccc 31002216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35439768 - 35439690
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| ||||||||||    
T  35439768 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccc 35439690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 190
Target Start/End: Complemental strand, 28683231 - 28683137
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactc 190  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||| ||| | ||||  | | |||||||||| |||||||| ||||    
T  28683231 cccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgctgttaac--tctattgtgtgtttcagatcatccactc 28683137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7771583 - 7771508
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataaagaggttatggtccc 77  Q
    |||||| ||||||||||||||||||  |||||| ||||||| ||||| |||| |||||||||| |||||||||||||    
T  7771583 agtggacgtccggatgacccattaacagaataatgggaaac-ctaatcgtcatccaatataaaaaggttatggtccc 7771508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 19879472 - 19879536
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgcta 158  Q
    ||||||| |||||||||| |||||||||||||||| ||| ||||||| |||||||| ||||||||    
T  19879472 cccatctgaagagaacttgaggcataaaggtaccgattgaagaagaatcaaatcagccgccgcta 19879536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 23343427 - 23343494
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    ||||||| |||||||||| ||||||||||||| ||||||  ||||||||||||||| ||| |||||||    
T  23343427 cccatctgaagagaacttgaggcataaaggtatcggttgaggaagaaccaaatcagccgctgctaacc 23343494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36750176 - 36750251
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtc 75  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||||| || ||||||| ||||||| |||||||    
T  36750176 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtc 36750251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31008116 - 31008194
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||| |||||||||||| ||||||| |||||||  |||||| || ||||||| ||||||| ||||||||||    
T  31008116 agtggatgtccgaatgacccattaacggaataatgggaaaccataatggccatccaatataaaagaggctatggtcccc 31008194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35085077 - 35084999
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| |||||||  | ||||||| ||||||| ||||||||||    
T  35085077 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggctatccaatataaaagaggctatggtcccc 35084999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35091050 - 35090972
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||| |||||||  | ||||||| ||||||| ||||||||||    
T  35091050 agtggatgtccggatggcccattaacggaataatgggaaaccctaatggctatccaatataaaagaggctatggtcccc 35090972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 11048837 - 11048776
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccg 155  Q
    ||||||| |||||||||| ||||||||||||||| ||||  |||||||||||| ||||||||    
T  11048837 cccatctgaagagaacttgaggcataaaggtaccagttgaggaagaaccaaattagtcgccg 11048776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 11048951 - 11048874
Alignment:
Q  2 gtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    ||||||||| |||||||||||||| ||||||| ||||||| |||||||  | ||||||| ||||||| ||||||||||    
T  11048951 gtggatgtctggatgacccattaacggaataatgggaaaccctaatggcgatccaatataaaagaggctatggtcccc 11048874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30965089 - 30965167
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| ||||||  ||||||| || | ||||| ||||||| ||||||||||    
T  30965089 agtggatgtccggatggcccattaacggaataatgggaaatcctaatggccatctaatataaaagaggctatggtcccc 30965167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44717203 - 44717125
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    |||||||||||||||| |||||||| ||||||| || |||| ||||||  || ||||||| ||||||| ||||||||||    
T  44717203 agtggatgtccggatggcccattaacggaataatggaaaaccctaatgaccatccaatataaaagaggctatggtcccc 44717125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 23284708 - 23284784
Alignment:
Q  2 gtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtccc 77  Q
    |||||||| | ||||||||||||| ||||||| | ||||||||||||| || | ||||| ||||| |||||||||||    
T  23284708 gtggatgttctgatgacccattaacggaataatgtgaaactctaatggccatcaaatataaaagatgttatggtccc 23284784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19879356 - 19879416
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatataa 62  Q
    |||| |||||| ||||||||||||| ||||||| |||||||| |||||| || |||||||||    
T  19879356 agtgaatgtccagatgacccattaacggaataatgggaaact-taatggccatccaatataa 19879416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 23343318 - 23343394
Alignment:
Q  2 gtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    ||||||||||||||||||||||||  ||||||  |||||| ||||||  || ||||||| ||||||| ||||||||||    
T  23343318 gtggatgtccggatgacccattaacagaataa-tggaaaccctaatgaccatccaatataaaagaggctatggtcccc 23343394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 35442230 - 35442198
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataa 33  Q
    ||||||||||||||||||||||||| |||||||    
T  35442230 agtggatgtccggatgacccattaacggaataa 35442198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 1480 - 1367
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| ||||||||| ||||||||||  ||| ||||||||||||||||||||||  | | |||||||||| |||||||   ||||||    
T  1480 cccatctgaagagaacttgaggcataaatgtaccggttgaggaaaaaccaaatcagtcgccgctaac--tctattgtgtgtttcagatcat---ctcctc 1386  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  1385 tctttggttatcgttgttg 1367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 173176 - 173063
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatcaactcctc 193  Q
    ||||||| |||||||||| |||||||||||||| |||||  ||||||||||||||| ||||||||||  | | |||||||||| |||||||   || |||    
T  173176 cccatctgaagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaac--tctattgtgtgtttcagatcat---cttctc 173082  T
Q  194 tctttgtttatagttgttg 212  Q
    |||||| |||| |||||||    
T  173081 tctttggttatcgttgttg 173063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 173287 - 173209
Alignment:
Q  1 agtggatgtccggatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
    ||||||||||||||||  | ||||| ||||||| ||||||| |||||||||| ||||||| ||||||| ||||||||||    
T  173287 agtggatgtccggatgttctattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtcccc 173209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 905 - 840
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaa 159  Q
    ||||||| |||||||||| ||||||||| ||||||||||  ||||||||||||||| |||||||||    
T  905 cccatctgaagagaacttgaggcataaacgtaccggttgaggaagaaccaaatcagccgccgctaa 840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 5825 - 5910
Alignment:
Q  101 aaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaaccatattttgtgtgttttagatcatca 186  Q
    ||||| ||||| ||||||||| ||||||||||  |||||||||||| ||||| |||||||| ||| ||||| |||||||| |||||    
T  5825 aaagataacttgaggcataaatgtaccggttgaggaagaaccaaattagtcgtcgctaaccctatgttgtgcgttttagaccatca 5910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 957 - 1024
Alignment:
Q  94 cccatctaaagagaactttaggcataaaggtaccggttggagaagaaccaaatcagtcgccgctaacc 161  Q
    ||||||| |||||||||| |||||||||| || ||||||  ||||||||||||||| |||| ||||||    
T  957 cccatctgaagagaacttgaggcataaagataacggttgaggaagaaccaaatcagccgccactaacc 1024  T

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Target: scaffold1114; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 837 - 903
Alignment:
Q  13 gatgacccattaatggaataacgggaaactctaatggtcacccaatat-aaagaggttatggtcccc 78  Q
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T  837 gatgacccattaacagaataatgggaaaccctaatggtcatccaatataaaagaggctatggtcccc 903  T

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