View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8175_low_10 (Length: 539)

Name: NF8175_low_10
Description: NF8175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8175_low_10
NF8175_low_10
[»] chr7 (20 HSPs)
chr7 (388-528)||(1110921-1111063)
chr7 (20-123)||(1110689-1110791)
chr7 (214-251)||(18732260-18732297)
chr7 (339-384)||(38123769-38123814)
chr7 (214-255)||(41699111-41699152)
chr7 (214-250)||(35481835-35481871)
chr7 (348-386)||(1110864-1110902)
chr7 (214-252)||(21907230-21907268)
chr7 (214-255)||(2927230-2927271)
chr7 (214-251)||(3498342-3498379)
chr7 (214-251)||(19532008-19532045)
chr7 (214-251)||(32389203-32389240)
chr7 (214-251)||(33471545-33471582)
chr7 (214-251)||(46221126-46221163)
chr7 (214-251)||(46477181-46477218)
chr7 (166-214)||(48135561-48135610)
chr7 (124-160)||(1111030-1111066)
chr7 (166-213)||(5639553-5639601)
chr7 (215-255)||(5639601-5639641)
chr7 (166-213)||(11909260-11909308)
[»] chr2 (23 HSPs)
chr2 (166-255)||(42230566-42230666)
chr2 (165-204)||(31619766-31619805)
chr2 (165-255)||(33052137-33052238)
chr2 (167-255)||(44949386-44949485)
chr2 (216-255)||(25899402-25899441)
chr2 (388-423)||(33502914-33502949)
chr2 (166-212)||(6973639-6973685)
chr2 (166-204)||(38262091-38262129)
chr2 (214-251)||(85739-85776)
chr2 (214-251)||(324844-324881)
chr2 (214-255)||(3094965-3095006)
chr2 (214-251)||(5144316-5144353)
chr2 (216-253)||(7105171-7105208)
chr2 (214-255)||(7728488-7728529)
chr2 (214-251)||(9709706-9709743)
chr2 (214-255)||(15080882-15080923)
chr2 (214-255)||(22352487-22352528)
chr2 (214-251)||(30905179-30905216)
chr2 (214-255)||(32749881-32749922)
chr2 (339-384)||(40582668-40582713)
chr2 (214-255)||(44402128-44402169)
chr2 (166-213)||(4184721-4184769)
chr2 (345-385)||(37561632-37561672)
[»] chr4 (35 HSPs)
chr4 (388-445)||(11271581-11271638)
chr4 (345-386)||(29904157-29904198)
chr4 (214-255)||(20787611-20787652)
chr4 (166-255)||(34321378-34321478)
chr4 (344-383)||(19067342-19067381)
chr4 (166-204)||(11347115-11347153)
chr4 (344-386)||(47179566-47179608)
chr4 (344-382)||(55085125-55085163)
chr4 (214-255)||(171183-171224)
chr4 (214-255)||(2994765-2994806)
chr4 (214-255)||(7695184-7695225)
chr4 (214-255)||(9011800-9011841)
chr4 (214-251)||(13743913-13743950)
chr4 (214-255)||(20787600-20787641)
chr4 (214-251)||(23329418-23329455)
chr4 (214-251)||(23710890-23710927)
chr4 (214-251)||(24529628-24529665)
chr4 (214-255)||(31808377-31808418)
chr4 (214-255)||(33032941-33032982)
chr4 (166-255)||(34709619-34709719)
chr4 (214-255)||(34709630-34709671)
chr4 (214-255)||(35003154-35003195)
chr4 (214-255)||(36469926-36469967)
chr4 (214-255)||(38616454-38616495)
chr4 (214-251)||(43635891-43635928)
chr4 (214-255)||(45861060-45861101)
chr4 (165-213)||(48088091-48088140)
chr4 (214-251)||(49745511-49745548)
chr4 (214-255)||(54927160-54927201)
chr4 (214-251)||(55501250-55501287)
chr4 (214-255)||(55616859-55616900)
chr4 (214-255)||(55616870-55616911)
chr4 (214-255)||(55624163-55624204)
chr4 (214-255)||(55624174-55624215)
chr4 (166-213)||(9968426-9968474)
[»] chr3 (22 HSPs)
chr3 (214-255)||(48906171-48906212)
chr3 (166-255)||(55198654-55198743)
chr3 (214-251)||(22995744-22995781)
chr3 (214-251)||(40326493-40326530)
chr3 (214-255)||(43883918-43883959)
chr3 (214-253)||(37331654-37331693)
chr3 (216-251)||(51256615-51256650)
chr3 (396-457)||(7298348-7298409)
chr3 (214-255)||(13927439-13927480)
chr3 (214-255)||(14626672-14626713)
chr3 (214-251)||(14626683-14626720)
chr3 (214-251)||(16127803-16127840)
chr3 (214-255)||(16607409-16607450)
chr3 (214-251)||(18480931-18480968)
chr3 (214-255)||(25990693-25990734)
chr3 (214-255)||(35455618-35455659)
chr3 (214-251)||(39530450-39530487)
chr3 (214-251)||(42595785-42595822)
chr3 (214-255)||(54008482-54008523)
chr3 (215-251)||(17501461-17501497)
chr3 (166-213)||(17940184-17940232)
chr3 (215-255)||(38082558-38082598)
[»] chr5 (31 HSPs)
chr5 (396-460)||(42439646-42439710)
chr5 (166-255)||(13461594-13461694)
chr5 (214-255)||(13461605-13461646)
chr5 (214-255)||(14274189-14274230)
chr5 (214-255)||(18753655-18753696)
chr5 (163-204)||(34102068-34102109)
chr5 (214-255)||(34820669-34820710)
chr5 (166-205)||(4417866-4417905)
chr5 (166-204)||(4162909-4162947)
chr5 (165-214)||(9087601-9087651)
chr5 (225-255)||(22474004-22474034)
chr5 (166-204)||(34820621-34820659)
chr5 (214-255)||(5089497-5089538)
chr5 (214-255)||(5226074-5226115)
chr5 (214-255)||(6168723-6168764)
chr5 (214-251)||(7336910-7336947)
chr5 (214-255)||(8618452-8618493)
chr5 (214-255)||(8959840-8959881)
chr5 (166-255)||(13359157-13359257)
chr5 (214-255)||(18003912-18003953)
chr5 (214-255)||(21344504-21344545)
chr5 (214-251)||(26168243-26168280)
chr5 (214-251)||(36346850-36346887)
chr5 (214-251)||(38860855-38860892)
chr5 (216-253)||(40271323-40271360)
chr5 (166-251)||(43585543-43585639)
chr5 (214-251)||(43585550-43585587)
chr5 (166-213)||(7164839-7164887)
chr5 (344-384)||(13224739-13224779)
chr5 (344-384)||(14670942-14670982)
chr5 (164-204)||(38860906-38860946)
[»] chr1 (29 HSPs)
chr1 (163-255)||(47912616-47912719)
chr1 (214-255)||(435250-435291)
chr1 (214-255)||(9135573-9135614)
chr1 (166-255)||(13911282-13911374)
chr1 (214-255)||(15311527-15311568)
chr1 (214-255)||(17387705-17387746)
chr1 (214-255)||(22954816-22954857)
chr1 (214-255)||(24015063-24015104)
chr1 (344-384)||(8381908-8381948)
chr1 (164-255)||(45748991-45749092)
chr1 (158-197)||(47882004-47882043)
chr1 (166-204)||(9947750-9947788)
chr1 (164-213)||(47418223-47418273)
chr1 (214-251)||(4682992-4683029)
chr1 (214-255)||(4974100-4974141)
chr1 (214-251)||(5852736-5852773)
chr1 (214-255)||(24015052-24015093)
chr1 (214-251)||(26423472-26423509)
chr1 (214-255)||(31919884-31919925)
chr1 (214-251)||(33738218-33738255)
chr1 (214-255)||(34662449-34662490)
chr1 (214-255)||(35838762-35838803)
chr1 (214-255)||(38149408-38149449)
chr1 (166-251)||(38824287-38824383)
chr1 (214-255)||(38847357-38847398)
chr1 (214-255)||(42761288-42761329)
chr1 (214-255)||(45925288-45925329)
chr1 (214-251)||(46518000-46518037)
chr1 (162-194)||(38190964-38190996)
[»] chr8 (27 HSPs)
chr8 (157-251)||(26492357-26492462)
chr8 (214-255)||(2827411-2827452)
chr8 (214-255)||(41569556-41569597)
chr8 (339-383)||(32767302-32767346)
chr8 (216-251)||(15715084-15715119)
chr8 (214-253)||(36308569-36308608)
chr8 (166-204)||(1647036-1647074)
chr8 (214-255)||(2552842-2552883)
chr8 (214-255)||(2827400-2827441)
chr8 (214-251)||(3611824-3611861)
chr8 (214-251)||(5040123-5040160)
chr8 (214-255)||(5420231-5420272)
chr8 (214-255)||(7011847-7011888)
chr8 (214-251)||(8568868-8568905)
chr8 (214-251)||(27781939-27781976)
chr8 (214-251)||(35063508-35063545)
chr8 (214-255)||(36314913-36314954)
chr8 (214-255)||(40305067-40305108)
chr8 (214-251)||(40716801-40716838)
chr8 (339-384)||(41614763-41614808)
chr8 (214-251)||(42631827-42631864)
chr8 (214-255)||(42666172-42666213)
chr8 (214-255)||(45145646-45145687)
chr8 (214-255)||(45441146-45441187)
chr8 (344-384)||(11038106-11038146)
chr8 (166-213)||(33934075-33934123)
chr8 (344-384)||(39648266-39648306)
[»] chr6 (10 HSPs)
chr6 (166-204)||(25363733-25363771)
chr6 (214-255)||(10118662-10118703)
chr6 (214-255)||(12588810-12588851)
chr6 (214-255)||(14897091-14897132)
chr6 (214-251)||(21478608-21478645)
chr6 (214-255)||(25371048-25371089)
chr6 (214-255)||(26597209-26597250)
chr6 (214-255)||(28034059-28034100)
chr6 (214-255)||(29318092-29318133)
chr6 (217-253)||(24914386-24914422)
[»] scaffold0321 (1 HSPs)
scaffold0321 (214-255)||(1688-1729)
[»] scaffold0136 (1 HSPs)
scaffold0136 (214-255)||(22499-22540)
[»] scaffold0121 (1 HSPs)
scaffold0121 (214-255)||(17489-17530)


Alignment Details
Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 388 - 528
Target Start/End: Original strand, 1110921 - 1111063
Alignment:
Q  388 attttgcatccagaattgattctaacttgaggctagca-ttagtagcttttaagtctaagcgcgatttttacacctga-nnnnnnnnnncctaactctct 485  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||           |||||||||||    
T  1110921 attttgcatccggaattgattctaacctgaggctagcaattagtagcttttaagtctaagcgcgatttttacacctgatttttttttttcctaactctct 1111020  T
Q  486 ttaatatgacagcgccatggctgccatttgataacacaggttc 528  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1111021 ttaatatgacagcgccatggctgccatttgataacacaggttc 1111063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 1110689 - 1110791
Alignment:
Q  20 aaaacccaccatataaacacgccaattcgtcatcatggcaaacatccctttacaaattgcctatgacggtttgttaaaaaacccaacacgccattccaac 119  Q
    ||||||||||||||||||||| |||| | |||||||||||||||||||||| ||||||||||||  ||| | || |||||||  | ||||||||||||||    
T  1110689 aaaacccaccatataaacacggcaatgcatcatcatggcaaacatcccttttcaaattgcctattgcgg-tcgtcaaaaaacataccacgccattccaac 1110787  T
Q  120 atgg 123  Q
    ||||    
T  1110788 atgg 1110791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 18732297 - 18732260
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  18732297 tgtatgtggttcatattataaaccacatacatcattaa 18732260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 38123814 - 38123769
Alignment:
Q  339 agccgaaattgattctagagatataaaattgattttaacatgtttg 384  Q
    |||| ||||||||||||||||| || ||||||||||||||||||||    
T  38123814 agccaaaattgattctagagatgtagaattgattttaacatgtttg 38123769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 41699111 - 41699152
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  41699111 tgtatgtggttcatattatagaccacatacatcattaaatga 41699152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 35481835 - 35481871
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcatta 250  Q
    ||||||||||||||||||||||| |||||||||||||    
T  35481835 tgtatgtggttcatattataaaccacatacatcatta 35481871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 386
Target Start/End: Original strand, 1110864 - 1110902
Alignment:
Q  348 tgattctagagatataaaattgattttaacatgtttgat 386  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  1110864 tgattctagaggtatcaaattgattttaacatgtttgat 1110902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 21907268 - 21907230
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaa 252  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  21907268 tgtatgtggttcatattataaactacatagatcattaaa 21907230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 2927271 - 2927230
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  2927271 tgtatgtggtgcatattatgaaccacatacatcattaaatga 2927230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 3498379 - 3498342
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  3498379 tgtatgtggtccatattataaaccacatacatcattaa 3498342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 19532008 - 19532045
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  19532008 tgtatgtggtccatattataaactacatacatcattaa 19532045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 32389240 - 32389203
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  32389240 tgtatgtgattcatattataaaccacatacatcattaa 32389203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 33471545 - 33471582
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||||||||||||| || ||||||||||||||    
T  33471545 tgtatgtggttcatattatagaccacatacatcattaa 33471582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 46221163 - 46221126
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  46221163 tgtatgtggtccatattataaaccacatacatcattaa 46221126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 46477218 - 46477181
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  46477218 tgtatgtggtccatattataaaccacatacatcattaa 46477181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 48135610 - 48135561
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcattt 214  Q
    |||||| || |||||||||||||||||||||| | |||||||||||||||    
T  48135610 tactccctctgttttttaatataagcaaaattgattttttatgttcattt 48135561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 1111030 - 1111066
Alignment:
Q  124 cagcaccatggctgccatttgacaacacaggttcaaa 160  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  1111030 cagcgccatggctgccatttgataacacaggttcaaa 1111066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 5639553 - 5639601
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcatt 213  Q
    ||||||||| |||| ||||||||||||||||| | ||||||||||||||    
T  5639553 tactccttctgtttattaatataagcaaaattgattttttatgttcatt 5639601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 5639641 - 5639601
Alignment:
Q  215 gtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||||||| |||  |||||||||||||||||||||    
T  5639641 gtatgtggttcataatatggacaacatacatcattaaatga 5639601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 11909260 - 11909308
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcatt 213  Q
    |||||| ||||||||||||||||||||||||| | |||||| |||||||    
T  11909260 tactccctccgttttttaatataagcaaaattgactttttaagttcatt 11909308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 42230666 - 42230566
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcatt----------tgtatgtggttcatattataaacaacatacatcattaaatg 254  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||          |||||||||| |||||||||||| |||||||||||||||||    
T  42230666 tactccctccgttttttaatataagcaaaattgactttttatgttcattcatttaatgatgtatgtggtccatattataaaccacatacatcattaaatg 42230567  T
Q  255 a 255  Q
    |    
T  42230566 a 42230566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 31619766 - 31619805
Alignment:
Q  165 gtactccttccgttttttaatataagcaaaatttattttt 204  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  31619766 gtactccttccgttttttaatataagcaaaattgattttt 31619805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 255
Target Start/End: Original strand, 33052137 - 33052238
Alignment:
Q  165 gtactccttccgttttttaatataagcaaaatttattttt-atgttcattt----------gtatgtggttcatattataaacaacatacatcattaaat 253  Q
    ||||||| ||||||||||||||||||||||||| |||||| | ||| ||||          ||||||||| |||||||||||| ||||||||||||||||    
T  33052137 gtactccctccgttttttaatataagcaaaattgattttttaggtttatttatttaacgatgtatgtggtccatattataaaccacatacatcattaaat 33052236  T
Q  254 ga 255  Q
    ||    
T  33052237 ga 33052238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 44949485 - 44949386
Alignment:
Q  167 actccttccgttttttaatataagcaaaatttattttt-atgttcatt----------tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||| ||||||||| |||||||||||||||||||||| | |||||||          |||||||||| |||||||| ||| ||||||||||||||||||    
T  44949485 actccctccgtttttaaatataagcaaaatttattttttaagttcattcatttaatgatgtatgtggtccatattattaaccacatacatcattaaatga 44949386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 255
Target Start/End: Complemental strand, 25899441 - 25899402
Alignment:
Q  216 tatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  25899441 tatgtggttcatattatgaaccacatacatcattaaatga 25899402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 423
Target Start/End: Complemental strand, 33502949 - 33502914
Alignment:
Q  388 attttgcatccagaattgattctaacttgaggctag 423  Q
    |||||||||||||||||||||||||||||| |||||    
T  33502949 attttgcatccagaattgattctaacttgaagctag 33502914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 6973639 - 6973685
Alignment:
Q  166 tactccttccgttttttaatataagcaaaatttatttttatgttcat 212  Q
    |||||||||||||||| |||||||  |||||| ||||||||||||||    
T  6973639 tactccttccgtttttaaatataaataaaattgatttttatgttcat 6973685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 38262129 - 38262091
Alignment:
Q  166 tactccttccgttttttaatataagcaaaatttattttt 204  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  38262129 tactccttccgtttttaaatataagcaaattttattttt 38262091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 85739 - 85776
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  85739 tgtatgtggttcatattattaaccacatacatcattaa 85776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 324881 - 324844
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  324881 tgtatgtggtccatattataaactacatacatcattaa 324844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 3095006 - 3094965
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  3095006 tgtatgtggtccatattatgaaccacatacatcattaaatga 3094965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 5144353 - 5144316
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  5144353 tgtatgtggtccatattataaaccacatacatcattaa 5144316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 7105171 - 7105208
Alignment:
Q  216 tatgtggttcatattataaacaacatacatcattaaat 253  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  7105171 tatgtggttcatattataaaccacatacatcaataaat 7105208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 7728488 - 7728529
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  7728488 tgtatgtggtccatattatgaaccacatacatcattaaatga 7728529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 9709743 - 9709706
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  9709743 tgtatgtggtccatattataaaccacatacatcattaa 9709706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 15080923 - 15080882
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  15080923 tgtatgtggttcataatatagaccacatacatcattaaatga 15080882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 22352528 - 22352487
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  22352528 tgtatgtggttcataatatagaccacatacatcattaaatga 22352487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 30905179 - 30905216
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  30905179 tgtatgtggtccatattataaaccacatacatcattaa 30905216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 32749881 - 32749922
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||||||| ||| | ||||||||||||||||    
T  32749881 tgtatgtggttcatattatgaaccagatacatcattaaatga 32749922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 40582668 - 40582713
Alignment:
Q  339 agccgaaattgattctagagatataaaattgattttaacatgtttg 384  Q
    |||| ||||||||||||||| | || ||||||||||||||||||||    
T  40582668 agccaaaattgattctagaggtgtagaattgattttaacatgtttg 40582713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 44402169 - 44402128
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  44402169 tgtatgtggttcataatatagaccacatacatcattaaatga 44402128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 4184721 - 4184769
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcatt 213  Q
    |||||| ||||| ||||||||||||||||||| | ||||||||||||||    
T  4184721 tactccctccgtattttaatataagcaaaattgactttttatgttcatt 4184769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 37561632 - 37561672
Alignment:
Q  345 aattgattctagagatataaaattgattttaacatgtttga 385  Q
    |||||||||||||| | ||||||||||||| ||||||||||    
T  37561632 aattgattctagaggtgtaaaattgattttgacatgtttga 37561672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 11271638 - 11271581
Alignment:
Q  388 attttgcatccagaattgattctaacttgaggctagcattagtagcttttaagtctaa 445  Q
    ||||||| |||||||||||||||||||||| ||||| ||| ||||||||| |||||||    
T  11271638 attttgcctccagaattgattctaacttgaagctaggatttgtagcttttgagtctaa 11271581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 386
Target Start/End: Original strand, 29904157 - 29904198
Alignment:
Q  345 aattgattctagagatataaaattgattttaacatgtttgat 386  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  29904157 aattgattctagagatataaaattgattctaacatgtttgat 29904198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 20787611 - 20787652
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||| ||||||||||||||| ||||||||||||||||||    
T  20787611 tgtatgttgttcatattataaaccacatacatcattaaatga 20787652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 34321378 - 34321478
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcatt----------tgtatgtggttcatattataaacaacatacatcattaaatg 254  Q
    |||||||| ||||||| ||||||||||||||||| |||||| |||||||          ||||||||||||||| |||| || |||||||||||||||||    
T  34321378 tactcctttcgtttttaaatataagcaaaatttactttttaggttcattcatttaatgatgtatgtggttcataatatagactacatacatcattaaatg 34321477  T
Q  255 a 255  Q
    |    
T  34321478 a 34321478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 383
Target Start/End: Original strand, 19067342 - 19067381
Alignment:
Q  344 aaattgattctagagatataaaattgattttaacatgttt 383  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  19067342 aaattgattccagagatataaaattgattttgacatgttt 19067381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 11347115 - 11347153
Alignment:
Q  166 tactccttccgttttttaatataagcaaaatttattttt 204  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  11347115 tactccatccgtttttaaatataagcaaaatttattttt 11347153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 344 - 386
Target Start/End: Complemental strand, 47179608 - 47179566
Alignment:
Q  344 aaattgattctagagatataaaattgattttaacatgtttgat 386  Q
    ||||||||| ||||||| || ||||||||||||||||||||||    
T  47179608 aaattgattttagagatgtataattgattttaacatgtttgat 47179566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 55085163 - 55085125
Alignment:
Q  344 aaattgattctagagatataaaattgattttaacatgtt 382  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  55085163 aaattgattctagaggtatagaattgattttaacatgtt 55085125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 171183 - 171224
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  171183 tgtatgtggtccatattatgaaccacatacatcattaaatga 171224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 2994806 - 2994765
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  2994806 tgtatgtggtccatattatgaactacatacatcattaaatga 2994765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 7695184 - 7695225
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  7695184 tgtatgtggtccatattatgaaccacatacatcattaaatga 7695225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 9011800 - 9011841
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  9011800 tgtatgtggttcataatatagaccacatacatcattaaatga 9011841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 13743913 - 13743950
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  13743913 tgtatgtggtccatattataaaccacatacatcattaa 13743950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 20787641 - 20787600
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||    
T  20787641 tgtatgtggtttataatatgaacaacatacatcattaaatga 20787600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 23329455 - 23329418
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  23329455 tgtatgtggtccatattataaaccacatacatcattaa 23329418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 23710890 - 23710927
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  23710890 tgtatgtggtccatattataaaccacatacatcattaa 23710927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 24529628 - 24529665
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||||||||||||| || ||||||||||||||    
T  24529628 tgtatgtggttcatattatagaccacatacatcattaa 24529665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 31808377 - 31808418
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  31808377 tgtatgtggttcataatatagaccacatacatcattaaatga 31808418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 33032941 - 33032982
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||||||||||||| || ||||||||| ||||||||    
T  33032941 tgtatgtggttcatattatagaccacatacatcgttaaatga 33032982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 34709719 - 34709619
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcatt----------tgtatgtggttcatattataaacaacatacatcattaaatg 254  Q
    |||||| ||||||||||||||||||||||||| | |||||| |||||||          ||||||||||||||| |||  || |||||||||||||||||    
T  34709719 tactccctccgttttttaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggttcataatatggaccacatacatcattaaatg 34709620  T
Q  255 a 255  Q
    |    
T  34709619 a 34709619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 34709630 - 34709671
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  34709630 tgtatgtggtccatattatgaaccacatacatcattaaatga 34709671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 35003195 - 35003154
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||| ||||||||||||||  ||||||||||||||||||    
T  35003195 tgtatgtcgttcatattataaatcacatacatcattaaatga 35003154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 36469926 - 36469967
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  36469926 tgtatgtggttcataatatagaccacatacatcattaaatga 36469967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 38616495 - 38616454
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  38616495 tgtatgtggtccatattatgaaccacatacatcattaaatga 38616454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 43635891 - 43635928
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  43635891 tgtatgtggttcatattatgaactacatacatcattaa 43635928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 45861060 - 45861101
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  45861060 tgtatgtggtccatattatgaaccacatacatcattaaatga 45861101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 48088140 - 48088091
Alignment:
Q  165 gtactccttccgttttttaatataagcaaaattta-tttttatgttcatt 213  Q
    ||||||| ||||||||| ||||||||||||||| | ||||||||||||||    
T  48088140 gtactccctccgtttttaaatataagcaaaattgactttttatgttcatt 48088091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 49745548 - 49745511
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  49745548 tgtatgtggtccatattataaaccacatacatcattaa 49745511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 54927160 - 54927201
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  54927160 tgtatgtggtccatattatgaaccacatacatcattaaatga 54927201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 55501287 - 55501250
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  55501287 tgtatgtggttcataatataaaccacatacatcattaa 55501250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 55616900 - 55616859
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||    
T  55616900 tgtatgtggttcataatatgaaccacatacatcattaaatga 55616859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 55616870 - 55616911
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||||||| ||| |||||||| |||||||||    
T  55616870 tgtatgtggttcatattatgaaccacatacattattaaatga 55616911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 55624204 - 55624163
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||    
T  55624204 tgtatgtggttcataatatgaaccacatacatcattaaatga 55624163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 55624174 - 55624215
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||||||| ||| |||||||| |||||||||    
T  55624174 tgtatgtggttcatattatgaaccacatacattattaaatga 55624215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 9968474 - 9968426
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcatt 213  Q
    |||||| ||||||||| |||||||||||| |||| ||||||||||||||    
T  9968474 tactccctccgtttttaaatataagcaaattttattttttatgttcatt 9968426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 48906212 - 48906171
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  48906212 tgtatgtggttcatattataaaccacatacatcattaaatga 48906171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 55198743 - 55198654
Alignment:
Q  166 tactccttccgttttttaatataagcaaaatttatttttatgttcatt-tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||| ||||||||| |||||||| |||||| | ||| || || ||  |||||||||| |||||||| ||||||||||||||||||||||    
T  55198743 tactccctccgtttttaaatataagtaaaattgacttt-atattaatgatgtatgtggtccatattattaacaacatacatcattaaatga 55198654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 22995781 - 22995744
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  22995781 tgtatgtggttcatattataaaccacatacatcattaa 22995744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 40326493 - 40326530
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  40326493 tgtatgtggttcatattataaaccacatacatcattaa 40326530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 43883918 - 43883959
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  43883918 tgtatgtggttcatattataaaccacatacatcattagatga 43883959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 37331654 - 37331693
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaat 253  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  37331654 tgtatgtggtccatattataaaccacatacatcattaaat 37331693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 51256650 - 51256615
Alignment:
Q  216 tatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||| |||||||||||||||||||||||||||    
T  51256650 tatgtggtccatattataaacaacatacatcattaa 51256615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 457
Target Start/End: Complemental strand, 7298409 - 7298348
Alignment:
Q  396 tccagaattgattctaacttgaggctagcattagtagcttttaagtctaagcgcgattttta 457  Q
    |||||||| ||||||||||||| ||||| ||| |||| |||| ||||||| || ||||||||    
T  7298409 tccagaatcgattctaacttgaagctaggatttgtagtttttgagtctaatcgtgattttta 7298348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 13927480 - 13927439
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  13927480 tgtatgtggttcataatatagaccacatacatcattaaatga 13927439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 14626713 - 14626672
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||    
T  14626713 tgtatgtggttcataatatgaaccacatacatcattaaatga 14626672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 14626683 - 14626720
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  14626683 tgtatgtggttcatattatgaaccacatacatcattaa 14626720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 16127803 - 16127840
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  16127803 tgtatgtggtccatattataaaccacatacatcattaa 16127840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 16607409 - 16607450
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  16607409 tgtatgtggtccatattatgaaccacatacatcattaaatga 16607450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 18480931 - 18480968
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  18480931 tgtatgtggtccatattataaaccacatacatcattaa 18480968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 25990734 - 25990693
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  25990734 tgtatgtggttcataatatagaccacatacatcattaaatga 25990693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 35455618 - 35455659
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  35455618 tgtatgtggttcataatatagaccacatacatcattaaatga 35455659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 39530450 - 39530487
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||||||||||||| || ||||||||||||||    
T  39530450 tgtatgtggttcatattatagaccacatacatcattaa 39530487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 42595822 - 42595785
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  42595822 tgtatgtggtccatattataaaccacatacatcattaa 42595785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 54008523 - 54008482
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| ||||||| | ||||||||||||||||    
T  54008523 tgtatgtggttcataatataaaccaaatacatcattaaatga 54008482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 17501461 - 17501497
Alignment:
Q  215 gtatgtggttcatattataaacaacatacatcattaa 251  Q
    ||||||||||||||||||| || ||||||||||||||    
T  17501461 gtatgtggttcatattatagaccacatacatcattaa 17501497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 17940184 - 17940232
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcatt 213  Q
    |||||| ||||||||| ||||||||||||||||| |||||| |||||||    
T  17940184 tactccctccgtttttaaatataagcaaaatttactttttaggttcatt 17940232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 38082598 - 38082558
Alignment:
Q  215 gtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||| |||||||| ||| ||||||||||||||||||    
T  38082598 gtatgtggtccatattatgaaccacatacatcattaaatga 38082558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 42439710 - 42439646
Alignment:
Q  396 tccagaattgattctaacttgaggctagcattagtagcttttaagtctaagcgcgatttttacac 460  Q
    |||||||||||||||||||||| ||||| ||  ||||||||| ||||||| || |||||||||||    
T  42439710 tccagaattgattctaacttgaagctagaatctgtagcttttgagtctaaacgtgatttttacac 42439646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 13461694 - 13461594
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcatt----------tgtatgtggttcatattataaacaacatacatcattaaatg 254  Q
    |||||| ||||||||||||||||||||||||| | |||||| |||||||          ||||||||||||||| ||| ||| |||||||||||||||||    
T  13461694 tactccctccgttttttaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggttcataatatgaaccacatacatcattaaatg 13461595  T
Q  255 a 255  Q
    |    
T  13461594 a 13461594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 13461605 - 13461646
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  13461605 tgtatgtggttcatattatgaaccacatacatcattaaatga 13461646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 14274189 - 14274230
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  14274189 tgtatgtggtccatattataaactacatacatcattaaatga 14274230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 18753696 - 18753655
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  18753696 tgtatgtggttcatattatagaccacatacatcattaaatga 18753655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 34102068 - 34102109
Alignment:
Q  163 tagtactccttccgttttttaatataagcaaaatttattttt 204  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  34102068 tagtactccctccgtttttaaatataagcaaaatttattttt 34102109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 34820710 - 34820669
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  34820710 tgtatgtggttcatattatagaccacatacatcattaaatga 34820669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 4417905 - 4417866
Alignment:
Q  166 tactccttccgttttttaatataagcaaaatttattttta 205  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  4417905 tactccttccgtttttaaatataagcaaaaattattttta 4417866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 4162947 - 4162909
Alignment:
Q  166 tactccttccgttttttaatataagcaaaatttattttt 204  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  4162947 tactccttccgttttaaaatataagcaaaatttattttt 4162909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 9087651 - 9087601
Alignment:
Q  165 gtactccttccgttttttaatataagcaaaattta-tttttatgttcattt 214  Q
    ||||||||||||||||| ||||||||||||||| | |||||| ||||||||    
T  9087651 gtactccttccgtttttaaatataagcaaaattgactttttaggttcattt 9087601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 255
Target Start/End: Original strand, 22474004 - 22474034
Alignment:
Q  225 catattataaacaacatacatcattaaatga 255  Q
    |||||||||||||||||||||||||||||||    
T  22474004 catattataaacaacatacatcattaaatga 22474034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 34820621 - 34820659
Alignment:
Q  166 tactccttccgttttttaatataagcaaaatttattttt 204  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  34820621 tactccttccgtattttaatataagcaaaattaattttt 34820659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 5089538 - 5089497
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| |||||||| |||||||||||||    
T  5089538 tgtatgtggtccatattatgaacaacattcatcattaaatga 5089497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 5226074 - 5226115
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  5226074 tgtatgtggtccatattatgaaccacatacatcattaaatga 5226115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 6168764 - 6168723
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  6168764 tgtatgtggttcatattatggaccacatacatcattaaatga 6168723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 7336910 - 7336947
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  7336910 tgtatgtggtccatattataaaccacatacatcattaa 7336947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 8618452 - 8618493
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  8618452 tgtatgtggtccatattatgaaccacatacatcattaaatga 8618493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 8959840 - 8959881
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| ||||||||| |||||||||||    
T  8959840 tgtatgtggttcataatatagacaacatacctcattaaatga 8959881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 13359157 - 13359257
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcatt----------tgtatgtggttcatattataaacaacatacatcattaaatg 254  Q
    |||||| ||||||||||||||||||||||||| | |||||| |||||||          |||||||||| |||||||| ||| |||| ||||||||||||    
T  13359157 tactccctccgttttttaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggtccatattatgaaccacatgcatcattaaatg 13359256  T
Q  255 a 255  Q
    |    
T  13359257 a 13359257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 18003912 - 18003953
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  18003912 tgtatgtggttcataatatagaccacatacatcattaaatga 18003953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 21344504 - 21344545
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  21344504 tgtatgtggtccatattatgaaccacatacatcattaaatga 21344545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 26168243 - 26168280
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  26168243 tgtatgtggtccatattataaaccacatacatcattaa 26168280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 36346850 - 36346887
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  36346850 tgtatgtggtccatattataaaccacatacatcattaa 36346887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 38860855 - 38860892
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||||||||||||| || ||||||||||||||    
T  38860855 tgtatgtggttcatattatagaccacatacatcattaa 38860892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 40271360 - 40271323
Alignment:
Q  216 tatgtggttcatattataaacaacatacatcattaaat 253  Q
    |||||||||||||||||| || ||||||||||||||||    
T  40271360 tatgtggttcatattatataccacatacatcattaaat 40271323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 43585639 - 43585543
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcatt----------tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||| ||||||||| ||||||||||||||||| |||||| |||||||          ||||||||||||||| ||| ||| ||||||||||||||    
T  43585639 tactccatccgtttttaaatataagcaaaatttactttttaggttcattcaattaatgatgtatgtggttcataatatgaaccacatacatcattaa 43585543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 43585550 - 43585587
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  43585550 tgtatgtggttcatattatgaaccacatacatcattaa 43585587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 7164839 - 7164887
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattt-atttttatgttcatt 213  Q
    |||||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  7164839 tactccctccgttttttaatataagcaaattttgatttttaggttcatt 7164887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 384
Target Start/End: Complemental strand, 13224779 - 13224739
Alignment:
Q  344 aaattgattctagagatataaaattgattttaacatgtttg 384  Q
    ||||||||||||||||| || |||||||||| |||||||||    
T  13224779 aaattgattctagagatgtataattgattttgacatgtttg 13224739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 384
Target Start/End: Original strand, 14670942 - 14670982
Alignment:
Q  344 aaattgattctagagatataaaattgattttaacatgtttg 384  Q
    |||||||||| |||| |||| ||||||||||||||||||||    
T  14670942 aaattgattcaagaggtatagaattgattttaacatgtttg 14670982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 38860946 - 38860906
Alignment:
Q  164 agtactccttccgttttttaatataagcaaaatttattttt 204  Q
    |||||||| ||||||||| ||||||||||||||| ||||||    
T  38860946 agtactccctccgtttttaaatataagcaaaattgattttt 38860906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 47912719 - 47912616
Alignment:
Q  163 tagtactccttccgttttttaatataagcaaaattta-tttttatgttcatt----------tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    ||||||||||||||||||  ||||||||||||||||| |||||| |||||||          |||||||||| |||||||| ||| ||||||||||||||    
T  47912719 tagtactccttccgttttaaaatataagcaaaatttactttttaggttcattcatttaatgatgtatgtggtccatattattaaccacatacatcattaa 47912620  T
Q  252 atga 255  Q
    ||||    
T  47912619 atga 47912616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 435291 - 435250
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  435291 tgtatgtggtccatattataaaccacatacatcattaaatga 435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 9135573 - 9135614
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  9135573 tgtatgtggttcatattatgaaccacatacatcattaaatga 9135614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 13911282 - 13911374
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcatt--tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||| ||||||||  |||||||| |||||| | |||||| |||||||  ||||||||||||||| |||  || ||||||||||||||||||    
T  13911282 tactccctccgttttaaaatataagtaaaattgactttttaggttcattgatgtatgtggttcataatatggaccacatacatcattaaatga 13911374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 15311527 - 15311568
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  15311527 tgtatgtggtccatattataaactacatacatcattaaatga 15311568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 17387705 - 17387746
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  17387705 tgtatgtggtccatattataaaccacatacatcattaaatga 17387746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 22954857 - 22954816
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  22954857 tgtatgtggtccatattataaaccacatacatcattaaatga 22954816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 24015063 - 24015104
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  24015063 tgtatgtggttcatattatgaaccacatacatcattaaatga 24015104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 384
Target Start/End: Original strand, 8381908 - 8381948
Alignment:
Q  344 aaattgattctagagatataaaattgattttaacatgtttg 384  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  8381908 aaattgattctagaggtataaaattgattttgacatgtttg 8381948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 45748991 - 45749092
Alignment:
Q  164 agtactccttccgttttttaatataagcaaaatttattttt-atgttcatt----------tgtatgtggttcatattataaacaacatacatcattaaa 252  Q
    ||||||||| |||||||||||||||||||||||| |||||| | |||||||          ||||||||||||||| ||||||| ||||||||| |||||    
T  45748991 agtactcct-ccgttttttaatataagcaaaattgattttttaggttcattcatttaacgatgtatgtggttcataatataaaccacatacatcgttaaa 45749089  T
Q  253 tga 255  Q
    |||    
T  45749090 tga 45749092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 47882043 - 47882004
Alignment:
Q  158 aaaattagtactccttccgttttttaatataagcaaaatt 197  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  47882043 aaaattattactccttctgttttttaatataagcaaaatt 47882004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 9947750 - 9947788
Alignment:
Q  166 tactccttccgttttttaatataagcaaaatttattttt 204  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  9947750 tactccctccgttttttaatataagcaaaattgattttt 9947788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 47418273 - 47418223
Alignment:
Q  164 agtactccttccgttttttaatataagcaaaatt-tatttttatgttcatt 213  Q
    |||||||| ||||||||||||||||||||||||| | |||||| |||||||    
T  47418273 agtactccctccgttttttaatataagcaaaattgtttttttaggttcatt 47418223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 4682992 - 4683029
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||||||||||||| || ||||||||||||||    
T  4682992 tgtatgtggttcatattatagaccacatacatcattaa 4683029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 4974100 - 4974141
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  4974100 tgtatgtggtccatattatgaaccacatacatcattaaatga 4974141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 5852773 - 5852736
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  5852773 tgtatgtggtccatattataaaccacatacatcattaa 5852736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 24015093 - 24015052
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||    
T  24015093 tgtatgtggttcataatatgaaccacatacatcattaaatga 24015052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 26423509 - 26423472
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  26423509 tgtatgtggttcatattgtaaaccacatacatcattaa 26423472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 31919925 - 31919884
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  31919925 tgtatgtggtccatattatgaaccacatacatcattaaatga 31919884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 33738218 - 33738255
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  33738218 tgtatgtggtccatattataaaccacatacatcattaa 33738255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 34662490 - 34662449
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| ||||||  ||||||||||||||||||    
T  34662490 tgtatgtggttcataatataaatcacatacatcattaaatga 34662449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 35838803 - 35838762
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  35838803 tgtatgtggttcatattatggaccacatacatcattaaatga 35838762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 38149449 - 38149408
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||||||| | ||||||||||||||||    
T  38149449 tgtatgtggtccatattataaactatatacatcattaaatga 38149408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 38824287 - 38824383
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattta-tttttatgttcatt----------tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||| ||||||||| |||||||||||| |||| ||||||||||||||          ||||||||||||||| |||| || ||||||||||||||    
T  38824287 tactccatccgtttttaaatataagcaaattttattttttatgttcattcaattaatgatgtatgtggttcataatatagaccacatacatcattaa 38824383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 38847357 - 38847398
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||  ||||||||||| ||||||||||||||||||    
T  38847357 tgtatgtggtctatattataaaccacatacatcattaaatga 38847398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 42761288 - 42761329
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  42761288 tgtatgtggttcataatatagaccacatacatcattaaatga 42761329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 45925329 - 45925288
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  45925329 tgtatgtggttcataatatagaccacatacatcattaaatga 45925288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 46518000 - 46518037
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  46518000 tgtatgtggtccatattataaaccacatacatcattaa 46518037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 38190996 - 38190964
Alignment:
Q  162 ttagtactccttccgttttttaatataagcaaa 194  Q
    |||||||||| ||||||||||||||||||||||    
T  38190996 ttagtactccatccgttttttaatataagcaaa 38190964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 26492462 - 26492357
Alignment:
Q  157 caaaattagtactccttccgttttttaatataagcaaaattta-tttttatgttcatt----------tgtatgtggttcatattataaacaacatacat 245  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||| |||||| |||||||          |||||||||| |||||||| ||| ||||||||    
T  26492462 caaaattagtactccctccgtttttaaatataaacaaaatttactttttaggttcattgaattaatgatgtatgtggtccatattatgaaccacatacat 26492363  T
Q  246 cattaa 251  Q
    ||||||    
T  26492362 cattaa 26492357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 2827411 - 2827452
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  2827411 tgtatgtggttcataatataaaccacatacatcattaaatga 2827452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 41569556 - 41569597
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  41569556 tgtatgtggttcatattataaatcacatacatcattaaatga 41569597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 383
Target Start/End: Original strand, 32767302 - 32767346
Alignment:
Q  339 agccgaaattgattctagagatataaaattgattttaacatgttt 383  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||    
T  32767302 agccaaaattgattctagagatatagaattgattttgacatgttt 32767346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 15715084 - 15715119
Alignment:
Q  216 tatgtggttcatattataaacaacatacatcattaa 251  Q
    ||||||||||||||||||||| ||||||||||||||    
T  15715084 tatgtggttcatattataaaccacatacatcattaa 15715119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 36308569 - 36308608
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaat 253  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  36308569 tgtatgtggtccatattataaaccacatacatcattaaat 36308608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 1647036 - 1647074
Alignment:
Q  166 tactccttccgttttttaatataagcaaaatttattttt 204  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  1647036 tactccctccgtattttaatataagcaaaatttattttt 1647074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 2552883 - 2552842
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||||||| |||||||||||| |||||    
T  2552883 tgtatgtggtccatattataaaccacatacatcattgaatga 2552842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 2827441 - 2827400
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||    
T  2827441 tgtatgtggtttatattatgaaccacatacatcattaaatga 2827400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 3611824 - 3611861
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||||||||||||| || ||||||||||||||    
T  3611824 tgtatgtggttcatattatagaccacatacatcattaa 3611861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 5040123 - 5040160
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  5040123 tgtatgtggtccatattatgaacaacatacatcattaa 5040160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 5420272 - 5420231
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  5420272 tgtatgtggttcatattatagaccatatacatcattaaatga 5420231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 7011847 - 7011888
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  7011847 tgtatgtggttcataatatagaccacatacatcattaaatga 7011888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 8568905 - 8568868
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||||||||||||| || ||||||||||||||    
T  8568905 tgtatgtggttcatattatagaccacatacatcattaa 8568868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 27781939 - 27781976
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  27781939 tgtatgtggtccatattataaaccacatacatcattaa 27781976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 35063545 - 35063508
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||||||||||||| || ||||||||||||||    
T  35063545 tgtatgtggttcatattatagaccacatacatcattaa 35063508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 36314913 - 36314954
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  36314913 tgtatgtggttcataatatagaccacatacatcattaaatga 36314954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 40305067 - 40305108
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||  ||||||||||| ||||||||||||||||||    
T  40305067 tgtatgtggtgtatattataaaccacatacatcattaaatga 40305108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 40716801 - 40716838
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  40716801 tgtatgtggtacatattataaaccacatacatcattaa 40716838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 41614763 - 41614808
Alignment:
Q  339 agccgaaattgattctagagatataaaattgattttaacatgtttg 384  Q
    |||| ||||||||||||||| ||||||||||||||| || ||||||    
T  41614763 agccaaaattgattctagaggtataaaattgattttgacttgtttg 41614808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 42631864 - 42631827
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  42631864 tgtatgtggtccatattataaaccacatacatcattaa 42631827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 42666172 - 42666213
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  42666172 tgtatgtggttcataatatagaccacatacatcattaaatga 42666213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 45145687 - 45145646
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  45145687 tgtatgtggttcataatatagaccacatacatcattaaatga 45145646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 45441187 - 45441146
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  45441187 tgtatgtggttcataatatagaccacatacatcattaaatga 45441146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 384
Target Start/End: Original strand, 11038106 - 11038146
Alignment:
Q  344 aaattgattctagagatataaaattgattttaacatgtttg 384  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  11038106 aaattgattctagaggtatataattgattttgacatgtttg 11038146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 33934075 - 33934123
Alignment:
Q  166 tactccttccgttttttaatataagcaaaattt-atttttatgttcatt 213  Q
    |||||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  33934075 tactccctccgttttttaatataagcaaattttgatttttaggttcatt 33934123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 384
Target Start/End: Complemental strand, 39648306 - 39648266
Alignment:
Q  344 aaattgattctagagatataaaattgattttaacatgtttg 384  Q
    ||||||||||||||||| || |||||||||| |||||||||    
T  39648306 aaattgattctagagatgtataattgattttgacatgtttg 39648266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000005; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 25363733 - 25363771
Alignment:
Q  166 tactccttccgttttttaatataagcaaaatttattttt 204  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  25363733 tactccttccgtttttaaatataagcaaaattgattttt 25363771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 10118703 - 10118662
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  10118703 tgtatgtggttcatattatggaccacatacatcattaaatga 10118662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 12588851 - 12588810
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||| |||||||||| ||| ||||||||||||||||||    
T  12588851 tgtatgtgtttcatattatgaaccacatacatcattaaatga 12588810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 14897132 - 14897091
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  14897132 tgtatgtggtccatattatgaaccacatacatcattaaatga 14897091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 21478608 - 21478645
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaa 251  Q
    |||||||||||||||||||| || ||||||||||||||    
T  21478608 tgtatgtggttcatattatagaccacatacatcattaa 21478645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 25371089 - 25371048
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  25371089 tgtatgtggtccatattatgaaccacatacatcattaaatga 25371048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 26597250 - 26597209
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  26597250 tgtatgtggtccatattatgaaccacatacatcattaaatga 26597209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 28034100 - 28034059
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  28034100 tgtatgtggtccatattatgaaccacatacatcattaaatga 28034059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 29318133 - 29318092
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  29318133 tgtatgtggttcatattatggaccacatacatcattaaatga 29318092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 24914422 - 24914386
Alignment:
Q  217 atgtggttcatattataaacaacatacatcattaaat 253  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  24914422 atgtggtccatattataaaccacatacatcattaaat 24914386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 1688 - 1729
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  1688 tgtatgtggttcataatatagaccacatacatcattaaatga 1729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 22499 - 22540
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||||||||||| ||| | ||||||||||||||||    
T  22499 tgtatgtggttcatattattaaccatatacatcattaaatga 22540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 17489 - 17530
Alignment:
Q  214 tgtatgtggttcatattataaacaacatacatcattaaatga 255  Q
    ||||||||||  ||||||||||| ||||||||||||||||||    
T  17489 tgtatgtggtctatattataaaccacatacatcattaaatga 17530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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