View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8175_low_16 (Length: 504)
Name: NF8175_low_16
Description: NF8175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8175_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 475; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 7 - 489
Target Start/End: Complemental strand, 37303192 - 37302710
Alignment:
| Q |
7 |
tttggtgttgaaggtatggagataagtgcacgtttgacgatcgtagacgttgatttgattttccgtagctgcgtagaggaggttgttgtggagggcaagc |
106 |
Q |
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| T |
37303192 |
tttggtgttgaaggtatggagataagtgcacgtttgacgatcgtagacgttgatttgattttccgtagctgcgtagaggaggttgttgtggagggcaagc |
37303093 |
T |
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| Q |
107 |
gatgtgatagggcgggaagagtggggtgtgagagaggtgatgcagtggtaggagacggagaagttgttgaggttttgagaagagagtttttggagagatg |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37303092 |
gatgtgatagggcgggaagagtggggtgtgagagaggtgatgcagtggtaggagacggagaagttgttgaggttttgagaagagagtttttggagagatg |
37302993 |
T |
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| Q |
207 |
gaactgatggaagtgtttgtattgagtagttgctataaagagttgaggtgctgtcgtcggaggttagggttgaagaagaagaagtgcttgagtctgatgc |
306 |
Q |
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| T |
37302992 |
gaactgatggaagtgtttgtattgagtagttgctataaagagttgaggtgctgtcgtcggaggttagggttgaagaagaagaagtgcttgagtctgatgc |
37302893 |
T |
|
| Q |
307 |
atgttgttgtttcttggatggatgcagtgagatggttgagttgtgggtggccgtggcgcagttgttggtggaggagcatgtgtctaacaaccaccgtaac |
406 |
Q |
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| T |
37302892 |
atgttgttgtttcttggatggatgcagtgagatggttgagttgtgggtggccgtggcgcagttgttggcggaggagcatgtgtctaacaaccaccgtaac |
37302793 |
T |
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| Q |
407 |
ctcatgataaattagttgatagatagagatagtttgaatatggaaactatgttgtgaaggagagaaagtaacgcagaaaatat |
489 |
Q |
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| T |
37302792 |
ctcatgataaattagttgatagatagagatagtttgaatatggaaactatgttgtgaaggatagaaagtaacgcagaaaatat |
37302710 |
T |
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