View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8175_low_47 (Length: 317)
Name: NF8175_low_47
Description: NF8175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8175_low_47 |
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Alignment Details
Target: chr3 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 10465426 - 10465726
Alignment:
| Q |
1 |
attgagaaaacgtactggtaagggtggattgaaggcaagtaggtcactttggagaacgccaatgctaacggacagaatcacataattggcttcgtaaaca |
100 |
Q |
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| T |
10465426 |
attgagaaaacgtactggtaagggtggattgaaggcaagtaggtcactttggagaacgccaatgctaacggacagaatcacataattggcttcgtaaaca |
10465525 |
T |
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| Q |
101 |
caaccatcttccgtgatcaccgtaacaccatttcttgaatgttgcaattccctgacgacctgtataattccatgcaaaaaatcatagttcagctcaaaat |
200 |
Q |
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| T |
10465526 |
caaccatcttccgtgatcaccgtaacaccatttcttgaatgttgcaattccctgacgacctgtataattccatgcaaaaaatcatagttcagctcaaaat |
10465625 |
T |
|
| Q |
201 |
tctccagtgatgaagaagtttctactgcctagtaaaatgaactacgtgacgggacaaaaacaattgcagtcaaatggagaagagtaaaacaaagtccaaa |
300 |
Q |
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| T |
10465626 |
tctccagtgatgaagaagtttctactgcctagtaaaatgaactacgtgacgggacaaaaacaattgcagtcaaatggagaagagtaaaacaaagtccaaa |
10465725 |
T |
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| Q |
301 |
c |
301 |
Q |
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| T |
10465726 |
c |
10465726 |
T |
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