View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8175_low_64 (Length: 260)

Name: NF8175_low_64
Description: NF8175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8175_low_64
NF8175_low_64
[»] chr5 (5 HSPs)
chr5 (15-241)||(12596491-12596717)
chr5 (15-227)||(15801743-15801948)
chr5 (75-160)||(30416745-30416830)
chr5 (75-170)||(20810919-20811014)
chr5 (75-170)||(20837274-20837369)
[»] chr8 (12 HSPs)
chr8 (18-227)||(3392699-3392901)
chr8 (20-243)||(3313614-3313830)
chr8 (18-227)||(3362982-3363184)
chr8 (75-204)||(3268362-3268491)
chr8 (97-170)||(7165837-7165910)
chr8 (84-204)||(3408456-3408576)
chr8 (91-217)||(3326106-3326232)
chr8 (75-170)||(3399790-3399885)
chr8 (84-170)||(31174672-31174758)
chr8 (91-204)||(13807725-13807838)
chr8 (84-170)||(3287625-3287711)
chr8 (99-170)||(3263698-3263769)
[»] chr3 (2 HSPs)
chr3 (75-170)||(6907020-6907115)
chr3 (82-157)||(32412146-32412221)
[»] scaffold0468 (1 HSPs)
scaffold0468 (75-170)||(7426-7521)
[»] chr2 (1 HSPs)
chr2 (84-218)||(14768039-14768173)
[»] chr7 (1 HSPs)
chr7 (75-211)||(8372859-8372995)
[»] scaffold0729 (1 HSPs)
scaffold0729 (103-151)||(5645-5693)
[»] chr4 (1 HSPs)
chr4 (103-151)||(6792936-6792984)


Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 15 - 241
Target Start/End: Original strand, 12596491 - 12596717
Alignment:
Q  15 cagagatactaaatggttgtggtcttcaagcggatattggaataacagtgctgatacctgatagagagaagcctcataaaagttgaaaagaataacaagc 114  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12596491 cagagatactaaatgggtgtgatcttcaagcggatattggaataacagtgctgatacctgatagagagaagcctcataaaagttgaaaagaataacaagc 12596590  T
Q  115 ttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttcacctgaggagcctgagaagtgtagtcgattgtggtgccatgaaga 214  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12596591 ttggaatgaatgctttgctacaagacatgggaagagaaattgttcgcgaaagttcacctgaggagcctgagaagtgtagtcgattgtggtgccatgaaga 12596690  T
Q  215 tgtagttgatgtattgaccgaccatac 241  Q
    |||||||||||||||||||||||||||    
T  12596691 tgtagttgatgtattgaccgaccatac 12596717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 15 - 227
Target Start/End: Original strand, 15801743 - 15801948
Alignment:
Q  15 cagagatactaaatggttgtggtcttcaagcggatattggaataacagtgctgatacctgatagagagaagcctcataaaagttgaaaagaataacaagc 114  Q
    |||||||||||||||| ||||| ||||| || ||||||||||||  ||||||||       |||||||||||||| ||||||||||||||||||||||||    
T  15801743 cagagatactaaatgggtgtggacttcatgctgatattggaatagaagtgctga-------tagagagaagcctcctaaaagttgaaaagaataacaagc 15801835  T
Q  115 ttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttcacctgaggagcctgagaagtgtagtcgattgtggtgccatgaaga 214  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||  ||| ||||||||||||   ||||||    
T  15801836 ttggaatgcatgctctgctacgagacatgggaagagaaattgttcgtgaaagttcacctgaggagcctgagaaacgtactcgattgtggtgttttgaaga 15801935  T
Q  215 tgtagttgatgta 227  Q
    |||||||||||||    
T  15801936 tgtagttgatgta 15801948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 30416745 - 30416830
Alignment:
Q  75 atagagagaagcctcataaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcg 160  Q
    |||||| | |||||| |||||||||||||||||||||||||||||||||||| |||  ||  |||| |||||||||||||||||||    
T  30416745 atagagcggagcctcttaaaagttgaaaagaataacaagcttggaatgcatgatttaataagagacatgggaagagaaattgttcg 30416830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 20810919 - 20811014
Alignment:
Q  75 atagagagaagcctcataaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttca 170  Q
    |||||| | |||||| ||||||| ||||||||||||| |||||||||||| | ||||||   |||| ||||||||  ||||| | | |||||||||    
T  20810919 atagagcgcagcctcgtaaaagtcgaaaagaataacacgcttggaatgcacgatttgctcagagacatgggaagatcaattgctggtgaaagttca 20811014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 20837274 - 20837369
Alignment:
Q  75 atagagagaagcctcataaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttca 170  Q
    |||||| | |||||| ||||||| ||||||||||||| |||||||||||| | ||||||   |||| ||||||||  ||||| | | |||||||||    
T  20837274 atagagcgcagcctcgtaaaagtcgaaaagaataacacgcttggaatgcacgatttgctcagagacatgggaagatcaattgctggtgaaagttca 20837369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 3392901 - 3392699
Alignment:
Q  18 agatactaaatggttgtggtcttcaagcggatattggaataacagtgctgatacctgatagagagaagcctcataaaagttgaaaagaataacaagcttg 117  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||| |||||       |||||||||||||||||||||||||||||||| |||||||    
T  3392901 agatactaaatggttgtggacttcatgctgatattggaataacagtgttgata-------gagagaagcctcataaaagttgaaaagaataaaaagcttg 3392809  T
Q  118 gaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttcacctgaggagcctgagaagtgtagtcgattgtggtgccatgaagatgt 217  Q
    ||||||||| |||||||| |||| ||||||| ||||||||||| ||||||||||| ||||||||||||||| |||  ||||||||||| ||||| || ||    
T  3392808 gaatgcatgatttgctacgagacatgggaagggaaattgttcgtgaaagttcaccggaggagcctgagaagcgtacccgattgtggtgtcatgaggacgt 3392709  T
Q  218 agttgatgta 227  Q
    |||| |||||    
T  3392708 agttaatgta 3392699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 20 - 243
Target Start/End: Original strand, 3313614 - 3313830
Alignment:
Q  20 atactaaatggttgtggtcttcaagcggatattggaataacagtgctgatacctgatagagagaagcctcataaaagttgaaaagaataacaagcttgga 119  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||||||        ||| ||||||| |||||| |||||||| ||||||||||||||    
T  3313614 atactaaatggttgtggacttcatgctgatattggaataacagtgctgatt-------gagcgaagcctaataaaaattgaaaagtataacaagcttgga 3313706  T
Q  120 atgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttcacctgaggagcctgagaagtgtagtcgattgtggtgccatgaagatgtag 219  Q
    ||||||| ||| || | |||| ||||| |||||||||| || ||||||||||||||||||||||| ||| |||||||||||||||  ||||| |||||||    
T  3313707 atgcatgatttactgcgagacatgggacgagaaattgtccgtgaaagttcacctgaggagcctgaaaagcgtagtcgattgtggtatcatgaggatgtag 3313806  T
Q  220 ttgatgtattgaccgaccatactg 243  Q
    |||||||| |||||||||||||||    
T  3313807 ttgatgtactgaccgaccatactg 3313830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 3362982 - 3363184
Alignment:
Q  18 agatactaaatggttgtggtcttcaagcggatattggaataacagtgctgatacctgatagagagaagcctcataaaagttgaaaagaataacaagcttg 117  Q
    ||||||||||||||||||| ||| | || |||||||||||||||||| ||||       ||||||||||||||||||||||||||||||||| |||||||    
T  3362982 agatactaaatggttgtggacttaatgctgatattggaataacagtgttgat-------agagagaagcctcataaaagttgaaaagaataaaaagcttg 3363074  T
Q  118 gaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttcacctgaggagcctgagaagtgtagtcgattgtggtgccatgaagatgt 217  Q
    |||||||||||||||||| |||| ||||||| ||||||||||| ||||||||||| ||||||||||| |||  ||  ||||||||||||||||| || ||    
T  3363075 gaatgcatgctttgctacgagacatgggaagggaaattgttcgtgaaagttcaccggaggagcctgaaaagcatacccgattgtggtgccatgaggacgt 3363174  T
Q  218 agttgatgta 227  Q
    |||| |||||    
T  3363175 agttaatgta 3363184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 204
Target Start/End: Complemental strand, 3268491 - 3268362
Alignment:
Q  75 atagagagaagcctcataaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttcacctg 174  Q
    ||||||||||||||| ||||| ||||||||| |||||| ||||||||||||  |||||||  |||| |||||||||| ||||||||  |||| |||        
T  3268491 atagagagaagcctcctaaaaattgaaaagagtaacaaacttggaatgcatagtttgctaagagacatgggaagagagattgttcgtaaaagatcaataa 3268392  T
Q  175 aggagcctgagaagtgtagtcgattgtggt 204  Q
    | ||||||| |||| |||||||||||||||    
T  3268391 aagagcctgggaagcgtagtcgattgtggt 3268362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 7165910 - 7165837
Alignment:
Q  97 ttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttca 170  Q
    |||||||||||||||||||||||||||||| ||||||   |||| |||||||||||||||||||| ||||||||    
T  7165910 ttgaaaagaataacaagcttggaatgcatgatttgcttagagacatgggaagagaaattgttcgccaaagttca 7165837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 3408576 - 3408456
Alignment:
Q  84 agcctcataaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttcacctgaggagcctg 183  Q
    |||||| |||||||||| ||||||||||||||||||||||||| |||  ||  |||| |||||||||||||||| || ||||||||| |    || ||||    
T  3408576 agcctcctaaaagttgagaagaataacaagcttggaatgcatgatttaataagagacatgggaagagaaattgtccgtgaaagttcagcaagagaacctg 3408477  T
Q  184 agaagtgtagtcgattgtggt 204  Q
     |||| |||||||||||||||    
T  3408476 ggaagcgtagtcgattgtggt 3408456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 217
Target Start/End: Complemental strand, 3326232 - 3326106
Alignment:
Q  91 taaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttcacctgaggagcctgagaagtg 190  Q
    ||||| |||||||||||||||||||||||||||||  |||| ||  |||| |||||||||||||| |||| ||||||||  |  | ||||||| |||| |    
T  3326232 taaaaattgaaaagaataacaagcttggaatgcattgtttgataagagacatgggaagagaaattattcgtgaaagttctgcaaaagagcctgggaagcg 3326133  T
Q  191 tagtcgattgtggtgccatgaagatgt 217  Q
    |||| |||||||||  ||||| |||||    
T  3326132 tagtagattgtggtttcatgaggatgt 3326106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 3399885 - 3399790
Alignment:
Q  75 atagagagaagcctcataaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttca 170  Q
    |||||| | |||||| ||||||| |||||||||||||||||||||||||||| ||||||   |||| ||||||||| ||||| | | |||||||||    
T  3399885 atagagcgcagcctcctaaaagtcgaaaagaataacaagcttggaatgcatgatttgctcagagacatgggaagagcaattgctggtgaaagttca 3399790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 31174672 - 31174758
Alignment:
Q  84 agcctcataaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttca 170  Q
    ||||||||||||||||| || ||||||||||||  |||||||| ||||||   |||| ||||||||| ||||||| |||||| ||||    
T  31174672 agcctcataaaagttgataaaaataacaagcttcaaatgcatgatttgctcagagacatgggaagagcaattgttggcgaaatttca 31174758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 13807725 - 13807838
Alignment:
Q  91 taaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttcacctgaggagcctgagaagtg 190  Q
    ||||||| ||||||||| | || ||||||||||||| ||| |||| |||| |||||||||| |||||| |  |||| |||   ||||||| || |||| |    
T  13807725 taaaagtcgaaaagaatgataaacttggaatgcatggtttactacgagacatgggaagagagattgtttgtaaaagatcagaagaggagcttgggaagcg 13807824  T
Q  191 tagtcgattgtggt 204  Q
    ||||||||||||||    
T  13807825 tagtcgattgtggt 13807838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 3287711 - 3287625
Alignment:
Q  84 agcctcataaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttca 170  Q
    |||||| |||||||||| ||  |||||||||||| |||||||| |||  ||  |||  ||||||||||||||||||| |||||||||    
T  3287711 agcctcctaaaagttgacaattataacaagcttgaaatgcatgatttaataagagatatgggaagagaaattgttcgtgaaagttca 3287625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 3263769 - 3263698
Alignment:
Q  99 gaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttca 170  Q
    ||||||||||||||  |||||||||||| |||  ||  |||| ||||||||||||||||| | |||||||||    
T  3263769 gaaaagaataacaaaattggaatgcatgatttaataagagacatgggaagagaaattgtttgtgaaagttca 3263698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 6907115 - 6907020
Alignment:
Q  75 atagagagaagcctcataaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttca 170  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||||||| |||  ||  |||| ||||||||||||||||||| | |||||||    
T  6907115 atagagaggagccttttaaaagttgaaaagaataacaagcttggaatgcatgatttaataagagacatgggaagagaaattgttcgtggaagttca 6907020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 32412221 - 32412146
Alignment:
Q  82 gaagcctcataaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgt 157  Q
    |||||||  ||||| |||||||||||||||| ||||||||||||| | |||||  |||| ||||||||||||||||    
T  32412221 gaagccttgtaaaaattgaaaagaataacaaacttggaatgcatgatctgctaagagacatgggaagagaaattgt 32412146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 7521 - 7426
Alignment:
Q  75 atagagagaagcctcataaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttca 170  Q
    |||||||| |||||  ||||||| |||||||||||||||||||||||||||| |||  ||  |||| ||||||||||||| ||||||| |||||||    
T  7521 atagagaggagccttctaaaagtcgaaaagaataacaagcttggaatgcatgatttaataagagacatgggaagagaaatagttcgcggaagttca 7426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 218
Target Start/End: Complemental strand, 14768173 - 14768039
Alignment:
Q  84 agcctcataaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttcacctgaggagcctg 183  Q
    |||||| ||||||||| ||||||||||||||||  |||||||| |||| ||   ||| |||||||||||||||| ||  ||||||||||  | |||||||    
T  14768173 agcctcttaaaagttgtaaagaataacaagcttcaaatgcatgatttgatatgggacatgggaagagaaattgtccgtcaaagttcaccaaaagagcctg 14768074  T
Q  184 agaagtgtagtcgattgtggtgccatgaagatgta 218  Q
      ||| |||||||||||| || ||| || ||||||    
T  14768073 gaaagcgtagtcgattgttgttccacgaggatgta 14768039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 8372995 - 8372859
Alignment:
Q  75 atagagagaagcctcataaaagttgaaaagaataacaagcttggaatgcatgctttgctacaagacgtgggaagagaaattgttcgcgaaagttcacctg 174  Q
    |||||| | ||||||||||||||||| |||||||||||| ||   ||||||| ||| ||||  ||| ||||||||| ||| ||  ||||||||||| |      
T  8372995 atagagcgtagcctcataaaagttgataagaataacaagtttcagatgcatgatttactacgcgacatgggaagagcaatcgtcagcgaaagttcagcaa 8372896  T
Q  175 aggagcctgagaagtgtagtcgattgtggtgccatga 211  Q
    | |||||||| |||  ||||||||||||||| |||||    
T  8372895 aagagcctgaaaagcatagtcgattgtggtgtcatga 8372859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 5693 - 5645
Alignment:
Q  103 agaataacaagcttggaatgcatgctttgctacaagacgtgggaagaga 151  Q
    |||||||||||||||||||||||| | ||||||||| | ||| ||||||    
T  5693 agaataacaagcttggaatgcatgttctgctacaagccatggcaagaga 5645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 6792936 - 6792984
Alignment:
Q  103 agaataacaagcttggaatgcatgctttgctacaagacgtgggaagaga 151  Q
    |||||||||||||||||||||||| | ||||||||| | ||| ||||||    
T  6792936 agaataacaagcttggaatgcatgttctgctacaagccatggcaagaga 6792984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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