View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8180A_high_9 (Length: 458)

Name: NF8180A_high_9
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8180A_high_9
NF8180A_high_9
[»] chr7 (83 HSPs)
chr7 (6-443)||(14627761-14628197)
chr7 (69-427)||(26492187-26492544)
chr7 (69-427)||(26583536-26583888)
chr7 (69-427)||(22927768-22928125)
chr7 (78-427)||(35496073-35496421)
chr7 (69-427)||(46821836-46822194)
chr7 (78-427)||(42311111-42311459)
chr7 (69-427)||(1448728-1449084)
chr7 (78-427)||(23085353-23085700)
chr7 (112-425)||(42066962-42067272)
chr7 (74-427)||(2843139-2843477)
chr7 (158-427)||(35667130-35667398)
chr7 (85-427)||(433589-433929)
chr7 (65-427)||(20116401-20116761)
chr7 (224-427)||(6558853-6559056)
chr7 (92-427)||(46338898-46339233)
chr7 (69-427)||(21266214-21266569)
chr7 (154-427)||(48207808-48208079)
chr7 (84-427)||(1485154-1485496)
chr7 (158-413)||(42408272-42408527)
chr7 (231-427)||(23786558-23786754)
chr7 (158-427)||(45198931-45199198)
chr7 (252-427)||(32684672-32684847)
chr7 (119-427)||(23425271-23425576)
chr7 (224-427)||(34773687-34773890)
chr7 (224-427)||(17222898-17223100)
chr7 (154-427)||(31235682-31235963)
chr7 (257-420)||(19560007-19560170)
chr7 (84-427)||(6001857-6002208)
chr7 (158-427)||(35261207-35261476)
chr7 (224-427)||(7640673-7640873)
chr7 (318-427)||(13592407-13592515)
chr7 (236-427)||(32521827-32522016)
chr7 (157-427)||(20083240-20083517)
chr7 (227-420)||(46818324-46818514)
chr7 (226-357)||(17611103-17611234)
chr7 (84-204)||(32684522-32684641)
chr7 (92-203)||(36143711-36143821)
chr7 (302-426)||(46244171-46244292)
chr7 (279-329)||(3266540-3266590)
chr7 (335-425)||(17499581-17499670)
chr7 (335-425)||(17553544-17553633)
chr7 (309-411)||(43369687-43369788)
chr7 (226-326)||(969478-969578)
chr7 (281-329)||(9785473-9785521)
chr7 (281-329)||(45457473-45457521)
chr7 (166-209)||(5546277-5546320)
chr7 (384-427)||(17611245-17611288)
chr7 (224-279)||(37837533-37837588)
chr7 (254-296)||(28476211-28476253)
chr7 (224-288)||(17499696-17499760)
chr7 (224-288)||(17553454-17553518)
chr7 (335-371)||(22743027-22743063)
chr7 (281-329)||(36579258-36579306)
chr7 (239-332)||(3267237-3267327)
chr7 (226-289)||(3394434-3394497)
chr7 (224-279)||(8001621-8001676)
chr7 (224-279)||(9450212-9450267)
chr7 (254-289)||(22742928-22742963)
chr7 (254-289)||(24350909-24350944)
chr7 (279-329)||(41288110-41288160)
chr7 (337-426)||(13796848-13796935)
chr7 (281-318)||(36253086-36253123)
chr7 (281-329)||(1281054-1281102)
chr7 (254-294)||(1749214-1749254)
chr7 (285-329)||(2622752-2622796)
chr7 (178-214)||(7640893-7640929)
chr7 (281-329)||(10094597-10094645)
chr7 (293-329)||(10574549-10574585)
chr7 (285-329)||(11833178-11833222)
chr7 (335-411)||(19404690-19404765)
chr7 (281-329)||(21603616-21603664)
chr7 (281-329)||(21990818-21990866)
chr7 (335-371)||(24350811-24350847)
chr7 (224-330)||(26623817-26623920)
chr7 (285-329)||(27050380-27050424)
chr7 (254-294)||(35132931-35132971)
chr7 (335-371)||(35133030-35133066)
chr7 (254-330)||(41553461-41553537)
chr7 (254-330)||(41553806-41553882)
chr7 (335-411)||(46700118-46700193)
chr7 (285-329)||(48304310-48304354)
chr7 (254-294)||(48930757-48930797)
[»] chr3 (66 HSPs)
chr3 (69-427)||(25162256-25162612)
chr3 (65-427)||(4178380-4178741)
chr3 (75-427)||(39917296-39917645)
chr3 (74-427)||(25631424-25631777)
chr3 (65-425)||(46934458-46934816)
chr3 (69-427)||(32607287-32607645)
chr3 (65-427)||(36905937-36906298)
chr3 (74-427)||(44907297-44907649)
chr3 (108-427)||(49552122-49552439)
chr3 (65-427)||(12115909-12116274)
chr3 (108-419)||(35499104-35499418)
chr3 (158-427)||(17237710-17237981)
chr3 (158-427)||(29503370-29503637)
chr3 (74-427)||(38854934-38855286)
chr3 (65-427)||(51202152-51202508)
chr3 (110-427)||(14464368-14464686)
chr3 (69-427)||(50611316-50611672)
chr3 (225-427)||(42719491-42719693)
chr3 (225-427)||(3848817-3849019)
chr3 (224-424)||(30648620-30648820)
chr3 (100-410)||(38440496-38440801)
chr3 (226-427)||(36734591-36734791)
chr3 (156-427)||(22802927-22803206)
chr3 (238-427)||(21488078-21488269)
chr3 (226-425)||(31794046-31794244)
chr3 (65-289)||(4172382-4172605)
chr3 (310-427)||(2342522-2342639)
chr3 (262-427)||(25849821-25849985)
chr3 (155-427)||(46178481-46178744)
chr3 (89-287)||(2342332-2342528)
chr3 (226-415)||(6910622-6910802)
chr3 (332-421)||(21916555-21916643)
chr3 (84-427)||(37169068-37169405)
chr3 (154-204)||(3850576-3850626)
chr3 (254-326)||(12947305-12947377)
chr3 (279-329)||(39610364-39610414)
chr3 (158-203)||(21488019-21488064)
chr3 (254-411)||(30293419-30293575)
chr3 (87-200)||(36735277-36735389)
chr3 (254-330)||(29249218-29249294)
chr3 (281-329)||(40013197-40013245)
chr3 (285-329)||(42167938-42167982)
chr3 (281-329)||(45047670-45047718)
chr3 (318-409)||(6902959-6903049)
chr3 (254-289)||(7546595-7546630)
chr3 (224-279)||(20465045-20465100)
chr3 (226-289)||(29239300-29239363)
chr3 (224-279)||(43488665-43488720)
chr3 (254-289)||(51487091-51487126)
chr3 (254-296)||(27706291-27706333)
chr3 (254-296)||(42460731-42460773)
chr3 (281-330)||(14585618-14585667)
chr3 (167-204)||(31793996-31794033)
chr3 (87-140)||(47980852-47980905)
chr3 (87-140)||(47990139-47990192)
chr3 (87-140)||(47999426-47999479)
chr3 (87-140)||(48008713-48008766)
chr3 (346-427)||(54149082-54149161)
chr3 (293-329)||(3457107-3457143)
chr3 (335-371)||(8914792-8914828)
chr3 (84-140)||(25849655-25849711)
chr3 (281-329)||(36624620-36624668)
chr3 (166-202)||(42719436-42719472)
chr3 (281-329)||(49628020-49628068)
chr3 (335-371)||(51303615-51303651)
chr3 (281-329)||(54706640-54706688)
[»] chr5 (76 HSPs)
chr5 (65-427)||(27266757-27267119)
chr5 (154-427)||(2057736-2058009)
chr5 (65-427)||(34881531-34881898)
chr5 (86-427)||(18677363-18677704)
chr5 (65-427)||(19280843-19281203)
chr5 (69-427)||(7246783-7247140)
chr5 (84-427)||(19259710-19260050)
chr5 (69-427)||(7241607-7241965)
chr5 (74-427)||(7150233-7150585)
chr5 (74-427)||(21060181-21060531)
chr5 (224-427)||(41184338-41184541)
chr5 (74-418)||(42579707-42580060)
chr5 (158-427)||(43261717-43261984)
chr5 (167-427)||(30298130-30298388)
chr5 (74-427)||(26578079-26578433)
chr5 (156-427)||(16981201-16981473)
chr5 (65-369)||(30371545-30371849)
chr5 (112-425)||(35475238-35475548)
chr5 (158-427)||(781302-781569)
chr5 (224-427)||(3271300-3271503)
chr5 (86-427)||(28235427-28235766)
chr5 (224-427)||(10649625-10649825)
chr5 (160-427)||(43148645-43148908)
chr5 (69-427)||(7886837-7887192)
chr5 (158-427)||(42886392-42886659)
chr5 (224-427)||(27751904-27752106)
chr5 (259-427)||(4954005-4954173)
chr5 (65-380)||(36344436-36344748)
chr5 (155-427)||(15570819-15571088)
chr5 (164-427)||(20257594-20257855)
chr5 (235-427)||(7612956-7613148)
chr5 (309-427)||(11768065-11768180)
chr5 (158-366)||(27576309-27576516)
chr5 (301-427)||(22978822-22978947)
chr5 (353-427)||(30298951-30299025)
chr5 (254-411)||(19100552-19100708)
chr5 (107-204)||(10649316-10649412)
chr5 (324-410)||(6445951-6446036)
chr5 (309-406)||(42432962-42433058)
chr5 (281-329)||(17687361-17687409)
chr5 (262-375)||(28097169-28097279)
chr5 (67-204)||(3271529-3271663)
chr5 (277-367)||(41214622-41214714)
chr5 (224-279)||(6012213-6012268)
chr5 (335-426)||(6216978-6217067)
chr5 (254-329)||(10332576-10332651)
chr5 (356-419)||(41418628-41418690)
chr5 (158-288)||(11767720-11767851)
chr5 (279-329)||(17096158-17096208)
chr5 (256-374)||(13468612-13468727)
chr5 (254-294)||(14211208-14211248)
chr5 (254-294)||(28540973-28541013)
chr5 (224-279)||(14082448-14082503)
chr5 (335-374)||(35920965-35921004)
chr5 (301-407)||(11192425-11192530)
chr5 (154-204)||(14211110-14211160)
chr5 (303-389)||(42432019-42432103)
chr5 (158-203)||(1582243-1582288)
chr5 (158-203)||(1602527-1602572)
chr5 (281-318)||(23428408-23428445)
chr5 (75-140)||(35676259-35676324)
chr5 (335-371)||(2979278-2979314)
chr5 (281-329)||(7771738-7771786)
chr5 (281-329)||(11734736-11734784)
chr5 (285-329)||(14535058-14535102)
chr5 (335-411)||(15571566-15571641)
chr5 (281-329)||(17331484-17331532)
chr5 (285-329)||(17732303-17732347)
chr5 (254-294)||(19103534-19103574)
chr5 (224-344)||(19983336-19983456)
chr5 (281-329)||(20483342-20483390)
chr5 (224-272)||(24229866-24229914)
chr5 (335-371)||(28540878-28540914)
chr5 (281-329)||(32347631-32347679)
chr5 (281-329)||(33164385-33164433)
chr5 (281-329)||(42609300-42609348)
[»] chr4 (99 HSPs)
chr4 (65-427)||(4643686-4644049)
chr4 (69-427)||(25273709-25274074)
chr4 (84-427)||(38706608-38706950)
chr4 (69-427)||(10389652-10390008)
chr4 (65-427)||(9528775-9529137)
chr4 (69-427)||(43444227-43444583)
chr4 (65-427)||(9283741-9284102)
chr4 (65-427)||(43153912-43154279)
chr4 (69-427)||(50766410-50766766)
chr4 (84-427)||(34024336-34024676)
chr4 (69-427)||(53616548-53616906)
chr4 (78-419)||(31381578-31381917)
chr4 (74-427)||(1531745-1532099)
chr4 (64-427)||(867986-868354)
chr4 (82-427)||(51317832-51318176)
chr4 (75-427)||(2115486-2115837)
chr4 (69-427)||(6972644-6973001)
chr4 (69-426)||(37188494-37188847)
chr4 (65-426)||(44947233-44947602)
chr4 (167-427)||(29965565-29965826)
chr4 (85-427)||(35964874-35965214)
chr4 (245-427)||(49410232-49410414)
chr4 (69-427)||(20569086-20569448)
chr4 (84-427)||(10359446-10359787)
chr4 (231-427)||(47417657-47417853)
chr4 (158-411)||(8009275-8009526)
chr4 (162-427)||(14183729-14183992)
chr4 (69-395)||(9645479-9645804)
chr4 (240-427)||(45227939-45228126)
chr4 (158-427)||(32952649-32952913)
chr4 (75-427)||(21089992-21090333)
chr4 (155-427)||(49680456-49680728)
chr4 (156-427)||(18138812-18139082)
chr4 (168-427)||(46991029-46991287)
chr4 (156-427)||(49126025-49126295)
chr4 (156-351)||(56194519-56194716)
chr4 (154-427)||(12265373-12265653)
chr4 (226-427)||(27593727-27593926)
chr4 (69-375)||(2624331-2624636)
chr4 (226-427)||(3336062-3336256)
chr4 (245-427)||(52097814-52097996)
chr4 (84-427)||(35261037-35261383)
chr4 (302-411)||(23100745-23100853)
chr4 (87-204)||(47416736-47416852)
chr4 (355-427)||(56199215-56199287)
chr4 (254-411)||(26123280-26123436)
chr4 (84-200)||(5333656-5333768)
chr4 (302-410)||(36184599-36184706)
chr4 (336-411)||(28834164-28834238)
chr4 (254-411)||(43353468-43353629)
chr4 (69-204)||(27593959-27594091)
chr4 (373-427)||(9645422-9645476)
chr4 (224-330)||(28857378-28857484)
chr4 (229-330)||(52933970-52934072)
chr4 (384-425)||(1931651-1931692)
chr4 (75-135)||(50179611-50179671)
chr4 (162-209)||(1008221-1008268)
chr4 (224-318)||(1931723-1931817)
chr4 (158-200)||(5333584-5333626)
chr4 (166-200)||(23100617-23100651)
chr4 (362-427)||(7273712-7273776)
chr4 (319-404)||(40068694-40068778)
chr4 (254-330)||(9643394-9643470)
chr4 (338-374)||(21662541-21662577)
chr4 (338-374)||(21671305-21671341)
chr4 (281-329)||(26742380-26742428)
chr4 (254-294)||(36194711-36194751)
chr4 (303-407)||(49072682-49072785)
chr4 (254-330)||(51888238-51888314)
chr4 (254-330)||(52944317-52944393)
chr4 (285-317)||(55600466-55600498)
chr4 (254-289)||(22300855-22300890)
chr4 (335-426)||(22611284-22611373)
chr4 (65-128)||(29965505-29965568)
chr4 (224-279)||(32766493-32766548)
chr4 (335-374)||(33921155-33921194)
chr4 (335-426)||(53811129-53811218)
chr4 (309-351)||(1008322-1008364)
chr4 (224-326)||(2069611-2069712)
chr4 (279-329)||(29922989-29923039)
chr4 (254-288)||(47320460-47320494)
chr4 (224-289)||(4142820-4142885)
chr4 (163-204)||(21405440-21405481)
chr4 (280-329)||(32616776-32616825)
chr4 (226-326)||(36204415-36204516)
chr4 (281-330)||(44756958-44757007)
chr4 (281-329)||(7861123-7861171)
chr4 (335-411)||(19853445-19853520)
chr4 (281-329)||(20399820-20399868)
chr4 (160-204)||(23329094-23329138)
chr4 (281-329)||(24789345-24789393)
chr4 (281-329)||(24818866-24818914)
chr4 (254-294)||(27651946-27651986)
chr4 (281-329)||(29268694-29268742)
chr4 (285-329)||(39523569-39523613)
chr4 (281-329)||(40198462-40198510)
chr4 (281-329)||(43493204-43493252)
chr4 (160-204)||(49072878-49072922)
chr4 (160-200)||(52098044-52098084)
[»] chr2 (90 HSPs)
chr2 (74-427)||(6173463-6173815)
chr2 (74-427)||(9986240-9986597)
chr2 (75-427)||(27249049-27249400)
chr2 (65-427)||(36233827-36234191)
chr2 (65-427)||(2808370-2808729)
chr2 (78-427)||(20046980-20047327)
chr2 (78-427)||(45128040-45128387)
chr2 (93-427)||(7015609-7015941)
chr2 (69-402)||(30420503-30420836)
chr2 (69-427)||(21570306-21570663)
chr2 (92-427)||(3725030-3725363)
chr2 (154-427)||(4192749-4193020)
chr2 (154-427)||(32913152-32913423)
chr2 (75-414)||(3270140-3270477)
chr2 (158-426)||(8805781-8806048)
chr2 (78-427)||(8971526-8971874)
chr2 (154-427)||(41430938-41431211)
chr2 (69-427)||(40659830-40660183)
chr2 (69-365)||(34598813-34599108)
chr2 (224-414)||(3269022-3269212)
chr2 (224-414)||(3269581-3269771)
chr2 (137-404)||(26025331-26025597)
chr2 (89-427)||(459173-459509)
chr2 (228-427)||(27949410-27949609)
chr2 (167-421)||(22421659-22421905)
chr2 (69-428)||(25086862-25087220)
chr2 (154-427)||(27477065-27477331)
chr2 (224-427)||(4228113-4228306)
chr2 (278-427)||(84079-84227)
chr2 (262-427)||(32679008-32679173)
chr2 (310-427)||(40625955-40626072)
chr2 (227-427)||(17319305-17319503)
chr2 (242-427)||(37614024-37614208)
chr2 (158-418)||(39641766-39642026)
chr2 (228-350)||(31580564-31580686)
chr2 (335-427)||(33229038-33229130)
chr2 (328-427)||(41712687-41712785)
chr2 (329-427)||(38575383-38575481)
chr2 (67-287)||(40626066-40626284)
chr2 (254-417)||(8308181-8308342)
chr2 (74-266)||(41712824-41713015)
chr2 (158-406)||(32197715-32197961)
chr2 (362-427)||(34600332-34600397)
chr2 (158-266)||(32680640-32680749)
chr2 (226-350)||(9374531-9374655)
chr2 (226-296)||(12647982-12648052)
chr2 (156-204)||(31581840-31581888)
chr2 (254-374)||(38293559-38293679)
chr2 (69-184)||(33229129-33229243)
chr2 (254-411)||(44881657-44881813)
chr2 (254-330)||(6358899-6358977)
chr2 (268-371)||(18113893-18113996)
chr2 (254-329)||(29574657-29574732)
chr2 (224-331)||(18763437-18763541)
chr2 (285-329)||(45694363-45694407)
chr2 (84-135)||(31581891-31581942)
chr2 (224-279)||(39310928-39310983)
chr2 (154-204)||(42949624-42949675)
chr2 (254-332)||(14423321-14423399)
chr2 (337-411)||(18695147-18695220)
chr2 (378-427)||(9374465-9374514)
chr2 (304-408)||(3240946-3241049)
chr2 (281-329)||(5754444-5754492)
chr2 (335-371)||(14955620-14955656)
chr2 (281-329)||(36868164-36868212)
chr2 (158-200)||(18694961-18695004)
chr2 (335-410)||(19028849-19028923)
chr2 (335-426)||(29279490-29279579)
chr2 (335-426)||(31128700-31128789)
chr2 (285-328)||(36080683-36080726)
chr2 (309-411)||(13141550-13141651)
chr2 (314-344)||(17261606-17261636)
chr2 (254-328)||(28533984-28534058)
chr2 (304-410)||(36323915-36324019)
chr2 (254-296)||(37416706-37416748)
chr2 (255-330)||(4264472-4264544)
chr2 (335-372)||(30400007-30400044)
chr2 (304-349)||(34124521-34124566)
chr2 (346-427)||(36943040-36943119)
chr2 (281-329)||(4426575-4426623)
chr2 (281-329)||(4732226-4732274)
chr2 (354-426)||(7646588-7646658)
chr2 (281-329)||(9978586-9978634)
chr2 (281-329)||(12891035-12891083)
chr2 (254-330)||(17249175-17249250)
chr2 (285-329)||(20561049-20561093)
chr2 (160-204)||(27949339-27949383)
chr2 (254-330)||(32448647-32448722)
chr2 (281-329)||(34962993-34963041)
chr2 (281-329)||(43474045-43474093)
[»] chr1 (80 HSPs)
chr1 (158-427)||(28035053-28035322)
chr1 (92-427)||(50272038-50272372)
chr1 (84-427)||(45425964-45426303)
chr1 (78-427)||(51868543-51868891)
chr1 (65-427)||(19715793-19716155)
chr1 (65-427)||(33291316-33291678)
chr1 (65-427)||(51871687-51872046)
chr1 (65-427)||(5324456-5324816)
chr1 (84-427)||(40880911-40881253)
chr1 (78-427)||(50165997-50166344)
chr1 (224-427)||(9687103-9687305)
chr1 (119-427)||(7997663-7997972)
chr1 (65-427)||(35584516-35584880)
chr1 (69-427)||(7342548-7342905)
chr1 (69-427)||(5701083-5701442)
chr1 (84-427)||(30818249-30818585)
chr1 (85-427)||(25406182-25406523)
chr1 (154-421)||(9919299-9919566)
chr1 (108-427)||(9172353-9172673)
chr1 (108-427)||(9180335-9180655)
chr1 (165-427)||(34519054-34519311)
chr1 (84-427)||(11453776-11454118)
chr1 (158-427)||(14545434-14545700)
chr1 (120-427)||(3871285-3871591)
chr1 (84-427)||(18569209-18569550)
chr1 (92-427)||(30878924-30879258)
chr1 (74-427)||(50148203-50148553)
chr1 (119-427)||(20266178-20266485)
chr1 (85-427)||(38520433-38520773)
chr1 (224-413)||(31836787-31836975)
chr1 (157-416)||(39987303-39987560)
chr1 (119-427)||(27872615-27872920)
chr1 (119-427)||(45805726-45806014)
chr1 (226-427)||(48365664-48365864)
chr1 (274-427)||(40646700-40646857)
chr1 (234-427)||(33817066-33817271)
chr1 (235-427)||(33876536-33876740)
chr1 (226-427)||(39927453-39927653)
chr1 (93-427)||(7312004-7312329)
chr1 (85-288)||(19723176-19723377)
chr1 (242-427)||(41081602-41081787)
chr1 (335-427)||(32677028-32677120)
chr1 (335-427)||(19723404-19723496)
chr1 (224-377)||(44637401-44637554)
chr1 (69-203)||(40646514-40646647)
chr1 (98-204)||(25728080-25728185)
chr1 (383-427)||(11709605-11709649)
chr1 (254-330)||(34528719-34528795)
chr1 (281-329)||(42491049-42491097)
chr1 (254-330)||(44543262-44543337)
chr1 (254-330)||(47132892-47132968)
chr1 (335-426)||(21947537-21947626)
chr1 (383-422)||(27915007-27915046)
chr1 (254-296)||(16161823-16161865)
chr1 (276-330)||(29184222-29184276)
chr1 (254-296)||(34413155-34413197)
chr1 (310-371)||(4397036-4397097)
chr1 (285-326)||(4870953-4870994)
chr1 (386-427)||(31130491-31130532)
chr1 (310-374)||(31317795-31317859)
chr1 (281-329)||(42276511-42276559)
chr1 (254-330)||(49626903-49626978)
chr1 (335-415)||(51916595-51916673)
chr1 (347-426)||(4413210-4413287)
chr1 (224-279)||(5983798-5983853)
chr1 (163-214)||(18649993-18650044)
chr1 (335-426)||(44915723-44915812)
chr1 (254-330)||(48750170-48750250)
chr1 (254-288)||(12635159-12635193)
chr1 (279-329)||(45193545-45193595)
chr1 (268-329)||(20411715-20411776)
chr1 (158-202)||(5155985-5156029)
chr1 (281-329)||(8937786-8937834)
chr1 (285-329)||(9298333-9298377)
chr1 (281-329)||(15391169-15391217)
chr1 (285-329)||(15791192-15791236)
chr1 (334-374)||(16262944-16262984)
chr1 (293-329)||(32878876-32878912)
chr1 (335-371)||(36775682-36775718)
chr1 (281-329)||(44517303-44517351)
[»] chr6 (55 HSPs)
chr6 (65-427)||(12652758-12653123)
chr6 (74-427)||(23947215-23947567)
chr6 (69-427)||(25064057-25064415)
chr6 (98-427)||(33740476-33740804)
chr6 (79-427)||(8028016-8028363)
chr6 (160-427)||(8196305-8196572)
chr6 (65-427)||(8496783-8497147)
chr6 (85-427)||(4088297-4088639)
chr6 (158-427)||(16419068-16419337)
chr6 (65-427)||(17237184-17237543)
chr6 (73-427)||(4984465-4984828)
chr6 (158-427)||(7881000-7881270)
chr6 (85-427)||(10228518-10228858)
chr6 (65-427)||(7875942-7876297)
chr6 (69-427)||(4468389-4468737)
chr6 (164-427)||(35001506-35001769)
chr6 (245-427)||(33110608-33110790)
chr6 (84-417)||(12165678-12166008)
chr6 (226-427)||(28635011-28635220)
chr6 (179-427)||(25337501-25337744)
chr6 (332-427)||(7027947-7028042)
chr6 (325-427)||(16892714-16892816)
chr6 (226-427)||(33543522-33543719)
chr6 (341-427)||(17334846-17334932)
chr6 (154-325)||(34489154-34489327)
chr6 (226-427)||(4351903-4352095)
chr6 (78-288)||(17334607-17334818)
chr6 (69-204)||(33109656-33109790)
chr6 (242-411)||(1704065-1704233)
chr6 (225-288)||(7027811-7027874)
chr6 (366-420)||(20619585-20619639)
chr6 (366-427)||(12059671-12059732)
chr6 (302-411)||(25398617-25398725)
chr6 (158-200)||(8266545-8266587)
chr6 (226-330)||(30493491-30493595)
chr6 (278-344)||(9426873-9426939)
chr6 (262-330)||(26588499-26588567)
chr6 (254-326)||(31296807-31296879)
chr6 (281-329)||(31705321-31705369)
chr6 (254-330)||(8102709-8102789)
chr6 (165-204)||(9508837-9508876)
chr6 (166-209)||(13436705-13436748)
chr6 (384-427)||(34489357-34489399)
chr6 (158-204)||(17346671-17346717)
chr6 (279-329)||(19402727-19402777)
chr6 (254-288)||(22571461-22571495)
chr6 (279-329)||(23638037-23638087)
chr6 (334-411)||(8266716-8266792)
chr6 (335-371)||(546113-546149)
chr6 (293-329)||(1915103-1915139)
chr6 (335-371)||(14801909-14801945)
chr6 (281-329)||(23654406-23654454)
chr6 (285-329)||(29284913-29284957)
chr6 (226-334)||(31575530-31575638)
chr6 (339-411)||(31852126-31852197)
[»] chr8 (67 HSPs)
chr8 (68-427)||(42447925-42448284)
chr8 (65-427)||(43890022-43890384)
chr8 (69-420)||(9619262-9619613)
chr8 (92-427)||(4808816-4809150)
chr8 (88-432)||(34611652-34611995)
chr8 (69-427)||(44099834-44100187)
chr8 (69-427)||(11725511-11725866)
chr8 (65-427)||(9498497-9498860)
chr8 (88-427)||(2655717-2656056)
chr8 (224-427)||(11464154-11464357)
chr8 (84-427)||(44577880-44578216)
chr8 (65-427)||(32724379-32724749)
chr8 (74-427)||(14906821-14907174)
chr8 (108-427)||(9072585-9072904)
chr8 (69-427)||(33895911-33896272)
chr8 (113-427)||(19876085-19876396)
chr8 (65-427)||(35580282-35580642)
chr8 (74-427)||(11196726-11197069)
chr8 (75-427)||(17949082-17949419)
chr8 (84-427)||(33342281-33342620)
chr8 (224-427)||(29777202-29777405)
chr8 (167-420)||(43192252-43192503)
chr8 (84-427)||(28239676-28240027)
chr8 (166-427)||(37565777-37566038)
chr8 (262-427)||(23851392-23851557)
chr8 (172-427)||(33298787-33299040)
chr8 (158-427)||(16794210-16794477)
chr8 (84-427)||(27747013-27747352)
chr8 (226-427)||(39153040-39153241)
chr8 (226-427)||(15046879-15047078)
chr8 (74-427)||(15597066-15597417)
chr8 (303-427)||(43135477-43135600)
chr8 (238-330)||(36532894-36532986)
chr8 (65-193)||(29777054-29777181)
chr8 (303-411)||(35812723-35812830)
chr8 (279-318)||(10148099-10148138)
chr8 (227-287)||(8443579-8443639)
chr8 (228-330)||(5333391-5333493)
chr8 (301-411)||(14913137-14913246)
chr8 (279-329)||(30026807-30026857)
chr8 (346-411)||(7677214-7677278)
chr8 (72-200)||(18733852-18733980)
chr8 (395-427)||(11267162-11267194)
chr8 (254-326)||(24099284-24099356)
chr8 (281-329)||(28297032-28297080)
chr8 (256-296)||(39657440-39657480)
chr8 (335-374)||(471133-471172)
chr8 (224-279)||(7883314-7883369)
chr8 (224-279)||(23230604-23230659)
chr8 (335-370)||(27110436-27110471)
chr8 (224-279)||(37971244-37971299)
chr8 (254-328)||(29617301-29617375)
chr8 (281-326)||(10334332-10334377)
chr8 (160-209)||(25241718-25241767)
chr8 (254-330)||(1236722-1236797)
chr8 (254-330)||(1239422-1239497)
chr8 (293-329)||(2025149-2025185)
chr8 (281-329)||(3204710-3204758)
chr8 (319-411)||(12184356-12184447)
chr8 (319-411)||(12428784-12428875)
chr8 (254-330)||(15344297-15344372)
chr8 (254-330)||(15433362-15433437)
chr8 (254-330)||(15524666-15524741)
chr8 (335-371)||(18890669-18890705)
chr8 (281-329)||(37612809-37612857)
chr8 (293-329)||(38546078-38546114)
chr8 (281-329)||(43937102-43937150)
[»] scaffold0146 (1 HSPs)
scaffold0146 (158-427)||(16218-16489)
[»] scaffold0495 (1 HSPs)
scaffold0495 (85-427)||(5237-5577)
[»] scaffold0014 (1 HSPs)
scaffold0014 (162-425)||(201273-201534)
[»] scaffold0003 (1 HSPs)
scaffold0003 (75-427)||(361697-362043)
[»] scaffold0022 (1 HSPs)
scaffold0022 (224-425)||(83338-83536)
[»] scaffold0426 (2 HSPs)
scaffold0426 (236-427)||(6293-6484)
scaffold0426 (69-204)||(6161-6294)
[»] scaffold0311 (2 HSPs)
scaffold0311 (302-427)||(8745-8870)
scaffold0311 (84-260)||(8557-8731)
[»] scaffold0113 (1 HSPs)
scaffold0113 (254-373)||(36639-36758)
[»] scaffold0136 (1 HSPs)
scaffold0136 (309-426)||(34681-34796)
[»] scaffold0264 (1 HSPs)
scaffold0264 (228-288)||(20433-20493)
[»] scaffold0002 (2 HSPs)
scaffold0002 (244-346)||(453928-454030)
scaffold0002 (391-427)||(454056-454092)
[»] scaffold0608 (1 HSPs)
scaffold0608 (75-135)||(70-130)
[»] scaffold0347 (1 HSPs)
scaffold0347 (254-326)||(6016-6088)
[»] scaffold0127 (1 HSPs)
scaffold0127 (224-279)||(15450-15505)
[»] scaffold0088 (1 HSPs)
scaffold0088 (335-426)||(50857-50946)
[»] scaffold0017 (1 HSPs)
scaffold0017 (224-279)||(32822-32877)
[»] scaffold0888 (1 HSPs)
scaffold0888 (254-296)||(1743-1785)
[»] scaffold0536 (1 HSPs)
scaffold0536 (279-329)||(3054-3104)
[»] scaffold1379 (1 HSPs)
scaffold1379 (281-329)||(131-179)
[»] scaffold0121 (1 HSPs)
scaffold0121 (335-411)||(31207-31282)
[»] scaffold0056 (1 HSPs)
scaffold0056 (285-329)||(74324-74368)


Alignment Details
Target: chr7 (Bit Score: 340; Significance: 0; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 6 - 443
Target Start/End: Complemental strand, 14628197 - 14627761
Alignment:
Q  6 attaagaaccggaggtaagaagtatacgaacgnnnnnnnactatgaatggtgttgttgaaagtcggctctagttttcactctctaggttttttcttacag 105  Q
    ||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  14628197 attaagaacaggaggtaagaagtatacgaac-tttttttactatgaatggtgttgttgaaagtcggccctagttttcgctctctaagttttttcttacag 14628099  T
Q  106 tgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaa 205  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||     
T  14628098 tgtcttcattgaagggtggttttgggtcaaatttttaccggaaattacctcctcttcatctttttttctctaattcaatctaaataagtgattttcacat 14627999  T
Q  206 aaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtg 305  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14627998 aaatataggtttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttagtacggtg 14627899  T
Q  306 tttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatttta 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  14627898 tttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagattcggaggccatgaatattccagtcactttaatttta 14627799  T
Q  406 tcatatatttttgtaggcattaacttggatactgtgat 443  Q
    |||||||||||||||||||||||||||||| |||||||    
T  14627798 tcatatatttttgtaggcattaacttggatgctgtgat 14627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 26492187 - 26492544
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||  |||||||| |||| ||||||||| |||||||||| ||||||||||||||||| | || | | ||||| ||||| |||||||||||    
T  26492187 cggccctagttttatctctctagattttgtcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaataacccc-tcttcatcttt 26492285  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    ||||||||| |||||| ||||||||||||||||||| | || |||        | |||||||||||||||||||||||||||||||||||| || ||| |    
T  26492286 ttctctctatttcaatttaaataagtgattttcacatagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtccgccgtct 26492385  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||||| ||||||||||||||| | |||| |  || |||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  26492386 tgtgctgcgttgtttgatttcccgtcttcgcgcgatgttcatttgattcatattgaaaggtcgattattcaatcaaagatttgggcgtcaacgttgcaga 26492485  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  26492486 tccggatgccttggatattccggtcactttaattttatcatatatttttgtaggcatta 26492544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 26583536 - 26583888
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| || |||||||||||||||||||| |||||||||| |||||||||| |||||| | || | | ||||| ||||| |||||||||||    
T  26583536 cggccctagttttctctttctaggttttttcttacagtttcttcattgaggggtggtttttggtcaattcttgacctgaaatcacccc-tcttcatcttt 26583634  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    || |||||| |||||||||||||||||||||||| | | || ||||       | |||||||||||||||||||||||||||||||||||||| |||| |    
T  26583635 ttatctctatttcaatctaaataagtgattttcatatatatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtct 26583734  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    |||||||||||||||||||||   |||| || |  |||| |||||||||||||||||||||||||||||||||||||||     ||||||||||||||||    
T  26583735 tgtgcggcgttgtttgatttccagtcttcgtgcaatgttcatttgattcatattgaaagatcgattattcaatcaaaga-----gcgtcaacgttgcaga 26583829  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583830 ttcggaggtcatgaatattccggtcactttaattttatcatatatttttgtaggcatta 26583888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 69 - 427
Target Start/End: Complemental strand, 22928125 - 22927768
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||| ||||| ||||||||||||| |||| | || ||||||||   ||||||||||||||||| | || | | ||||| ||||| | |||||||||    
T  22928125 cggccctaattttctctctctaggttttctcttcccgtttcttcattagggggtggttttgggtcaattcttgacctgaaatcacccctt-ttcatcttt 22928027  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    ||||||||| |||||||||||||||||| ||||||| | || |||        | ||||||||||||||||||||||||||||||||||||||||||| |    
T  22928026 ttctctctatttcaatctaaataagtgactttcacacagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 22927927  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    |||||||||||||||| |||| | ||||  | ||||||| |||| |||| |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  22927926 tgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcaga 22927827  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  22927826 tccggaggccatggatattccggtgactttaattttatcatatatttttgtaggcatta 22927768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 78 - 427
Target Start/End: Complemental strand, 35496421 - 35496073
Alignment:
Q  78 ttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctcta 177  Q
    ||||| |||| |||||||| |||||| || |||||||||| ||||||||||||||||| | || | |  |||| |||   ||||||||||||||||||||    
T  35496421 ttttctctctttaggttttctcttactgtttcttcattgaggggtggttttgggtcaattcttgacctaaaatcaccaa-tcttcatctttttctctcta 35496323  T
Q  178 attcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcg 277  Q
     |||||||||| ||||||||||||||| | || ||||       | |||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  35496322 tttcaatctaattaagtgattttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcg 35496223  T
Q  278 ttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 377  Q
    |||||| ||||| | || | || ||||||| |||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  35496222 ttgtttcatttcccgtcctcgtgcggtgttcatttgatttatattgaaagatcgattattcaatcgaagatttgggcgtcaacgttgcagatccggaggc 35496123  T
Q  378 catgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  35496122 catggatatttcggtcactttaatttcatcatatatttttgtaggcatta 35496073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 46821836 - 46822194
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| ||||||||||||| ||||| | | | |||||||| ||||||||||||||||| | || | | ||||| ||||| |||||||||||    
T  46821836 cggccctagttttctctctctaggttttctcttataattttttcattgaggggtggttttgggtcaattcttgacctgaaatcacccc-tcttcatcttt 46821934  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgta 267  Q
    |||||| || |||||||||||||||||||||||||| | || |||         ||| || |||||||||||||||| ||||| ||||||||||||| |     
T  46821935 ttctctttatttcaatctaaataagtgattttcacatagatctagattttttttctttgtaatttcatcatctaagtatggtgatttgttgttcgtcttc 46822034  T
Q  268 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcag 367  Q
    |||||||||||||||||||||| | |||| || ||||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||    
T  46822035 ttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcag 46822134  T
Q  368 atccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  46822135 atccggaggcaatgaatattccgatcactttaatttcatcatatatttttgtaggcatta 46822194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 78 - 427
Target Start/End: Original strand, 42311111 - 42311459
Alignment:
Q  78 ttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctcta 177  Q
    ||||| ||||||||||||| ||||| ||| |||||| ||| ||||||||||||||||| | || | | ||||| | ||| |||||||| |||||||||||    
T  42311111 ttttctctctctaggttttctcttagagtttcttcactgaggggtggttttgggtcaattcttgacctgaaatcatccc-tcttcatcattttctctcta 42311209  T
Q  178 attcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcg 277  Q
     ||||||||||||||||||| |||||| | || ||||       | ||||||||||||||| ||||||||| ||||||||||||||||| || ||| |||    
T  42311210 tttcaatctaaataagtgatattcacatagatctaggtttttttctttgtgatttcatcatttaagtgtggcggtttgttgttcgtcgtcttatgcagcg 42311309  T
Q  278 ttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 377  Q
    |||||||||||  | |||| || || |||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||     
T  42311310 ttgtttgattttccgtcttcgtgcgatgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtcaacgttgcagatccggaggt 42311409  T
Q  378 catgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  42311410 catggatattccggtcactttaattttatcatatatttttgtacgcatta 42311459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 69 - 427
Target Start/End: Complemental strand, 1449084 - 1448728
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| |||||||||||||||||| |||  ||||  |||| ||||||||||||||||| | || | | ||||| |||    |||||||| |    
T  1449084 cggccctagttttctctctctaggttttttcttccagattctttgttgaggggtggttttgggtcaattcttgacctgaaataaccaaa-cttcatctct 1448986  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    ||||||||| |||||||||||||||||||||||||| | || |||          |||||||||||||||||||||||||| ||||||||||||||||||    
T  1448985 ttctctctatttcaatctaaataagtgattttcacatagatctagattttttat-ttgtgatttcatcatctaagtgtggttgtttgttgttcgtcgtat 1448887  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||||||||||||||||||||||| ||||  | ||||||| |||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||    
T  1448886 tgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatccattattcaatcaaagatttggatgtcaacgttgcaga 1448787  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||  | ||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  1448786 tccggaccctatggatattccgatcactttaattttatcatatatttttgtaggcatta 1448728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 78 - 427
Target Start/End: Original strand, 23085353 - 23085700
Alignment:
Q  78 ttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctcta 177  Q
    ||||| ||||||||||||| |||| | || |||||||||  ||||||||||||||||| | || |   ||||| ||||||||||||||||||||| ||||    
T  23085353 ttttctctctctaggttttctcttcc-gtttcttcattgg-gggtggttttgggtcaattattgacttgaaatcaccccctcttcatctttttctttcta 23085450  T
Q  178 attcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcg 277  Q
     |||||||||||||| ||| ||||||| | || ||||       | ||||||||| |||||||||||||||||||||||||||||||||  ||||||||     
T  23085451 tttcaatctaaataattgactttcacatagatctaggtttttttctttgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcatgtgcggca 23085550  T
Q  278 ttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 377  Q
    ||||||| |||| | ||||  | ||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |    
T  23085551 ttgtttgctttcccgtcttcttgcggtgttcattttattcatattgaaagatcgattattcaatcaaagatttgaacgtcaacgttgcagatctggagac 23085650  T
Q  378 catgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  23085651 catggatattccggtgactttaattttatcatatatttttgtaggcatta 23085700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 112 - 425
Target Start/End: Complemental strand, 42067272 - 42066962
Alignment:
Q  112 cattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatat 211  Q
    |||||||||||| ||||||||||| | || | | ||||| ||| | |||||||||| || ||| || |||||||||||||||||||||||||| | ||||    
T  42067272 cattgaagggtgattttgggtcaattcttgacctgaaatcacctc-tcttcatcttgttatctatatttcaatctaaataagtgattttcacatagatat 42067174  T
Q  212 aggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatt 311  Q
    ||        | || ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| ||||  | ||||||| |||    
T  42067173 ag-attttttctttctgatttcatcatctaagtgtgttggtttgttgttcgtcgtcttgtgcggcgctgtttgatttctcgtcttcttgcggtgttcatt 42067075  T
Q  312 tgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42067074 tgattcatattgaa-gatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaagccatgaatattccggtcactttaattttatcatat 42066976  T
Q  412 atttttgtaggcat 425  Q
    ||||||||||||||    
T  42066975 atttttgtaggcat 42066962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 74 - 427
Target Start/End: Complemental strand, 2843477 - 2843139
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||||||||| | || | | ||||  ||||| ||||||||||||||||    
T  2843477 ctagttttctctctctaggttttctcttacaatttcttcattgaagggtggttttgggtcaattcttgacctgaaaacacccc-tcttcatctttttctc 2843379  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgc 273  Q
    | || |||||||||||||||||||||||||| | || ||||         |||| |||||||||||||||||||||| |||||||||||||||           
T  2843378 tttatttcaatctaaataagtgattttcacatagatctaggttttttt--ttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgt------- 2843288  T
Q  274 ggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgg 373  Q
         ||||||||||| | |||| || ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  2843287 -----tgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgagcgtcaatgttgcagatccgg 2843193  T
Q  374 aggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  2843192 aggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 2843139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 158 - 427
Target Start/End: Complemental strand, 35667398 - 35667130
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||| | || ||||       | || |||||||||||||||||||||||||||||||    
T  35667398 tcttcatatttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttt-ctttttgatttcatcatctaagtgtggtggtttgtt 35667300  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    ||||||||| |||||||||||| ||||||||  | ||||  | ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35667299 gttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaacgatttgagcgtc 35667200  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    || ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  35667199 aatgttgcagattcggaggccatggatattccggtcactttaattttatcatatatttttgtatgcatta 35667130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 85 - 427
Target Start/End: Complemental strand, 433929 - 433589
Alignment:
Q  85 tctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaat 184  Q
    |||||||||||| ||||   || |||||||||  ||||||||||||||||| |||| | | ||||| | ||| | |||||||||||||||||| ||||||    
T  433929 tctctaggttttctcttctggtttcttcattg--gggtggttttgggtcaatttttgacctgaaatcatccctt-ttcatctttttctctctatttcaat 433833  T
Q  185 ctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtgg-tggtttgttgttcgtcgtattgtgcggcgttgttt 283  Q
    |||||||| ||| ||||||| | || |||        | ||||||||||||||||||||||||| ||||||||||||||| || |||||| |||||||||    
T  433832 ctaaataaatgactttcacatagatctagatttttttctttgtgatttcatcatctaagtgtgggtggtttgttgttcgttgtcttgtgcagcgttgttt 433733  T
Q  284 gatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaa 383  Q
    | |||||| ||||  ||| ||||| |||| |||| |||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  433732 gctttctcgtcttcttacagtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgttaacgttgcagatccggaggccatgaa 433633  T
Q  384 tattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  433632 tattccggtgactttaattttatcatatatttttgtaggcatta 433589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 65 - 427
Target Start/End: Original strand, 20116401 - 20116761
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||| ||||||| ||||| ||||  ||| |||||| ||| |||| |||||||||||| |||| | | ||||| ||||  |||||||    
T  20116401 aagtcggccctagttttctctctctatgttttctcttcaagtttcttcaatgaggggtagttttgggtcaatttttgacctgaaatcaccct-tcttcat 20116499  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 264  Q
    |||||||| |||| |||||||||||||||||||||||||| | || ||||       | ||||||||||||||| ||  |||||| ||||||||||||||    
T  20116500 ctttttctatctatttcaatctaaataagtgattttcacatagatctaggtttttt-ctttgtgatttcatcatatacatgtggttgtttgttgttcgtc 20116598  T
Q  265 gtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttg 364  Q
    || ||||||| |||||||||||||  | ||||  | ||||||| |||||||||||||||||||||||||||||||||||||  |||| ||||||||||||    
T  20116599 gtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaaaactttgggcgtcaacgttg 20116698  T
Q  365 cagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| || |||| |||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  20116699 cagacccagaggtcatagatattccggtcactttaattttatcaaatatttttgtaggcatta 20116761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 224 - 427
Target Start/End: Original strand, 6558853 - 6559056
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |||||| | |||| || ||||||| ||||||||||| |||    
T  6558853 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtacgacgttgttcgatttcccgtcttcgtgcggtgttcatttgattcattttg 6558952  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 423  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  6558953 aaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgcaagc 6559052  T
Q  424 atta 427  Q
    ||||    
T  6559053 atta 6559056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 92 - 427
Target Start/End: Original strand, 46338898 - 46339233
Alignment:
Q  92 gttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaata 191  Q
    ||||| ||||||| | |||||||||| |||| |||||||||||| | || | | ||||||| ||| ||||||||||||||||| || |||||| ||||||    
T  46338898 gttttctcttacaatttcttcattgaggggtagttttgggtcaattcttgacctgaaattatccc-tcttcatctttttctctttatttcaatgtaaata 46338996  T
Q  192 agtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttct 290  Q
    ||||||||||||| | || |||         ||| || |||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||      
T  46338997 agtgattttcacatagatctagcttttttttctttgtaatttcatcatttaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttc 46339096  T
Q  291 catcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccg 390  Q
    | |||| |||||||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||| || |||| ||| ||||||||    
T  46339097 cgtcttcgtacggtgttcatttgattcatattgaaagatctattgttcaatcaaagatttgggcgtcaacgttgcagattcgaaggcaatggatattccg 46339196  T
Q  391 gtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| |||||||||||||| | ||||||    
T  46339197 gtcactttaatttcatcatatatttttgcatgcatta 46339233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 21266214 - 21266569
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| |||| || |||||||||| |||| |||| ||||| ||||||||||||||||| | || |   ||||| ||| | |||||||||||    
T  21266214 cggccctagttttctctctttaagttttttcttccagtttctttattgaggggtggttttgggtcaattattgacatgaaatcacctc-tcttcatcttt 21266312  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    |||||| || |||||||||||||||||||||||||| | || ||||       | || ||||||||||||||||||||||||||||||| |||||||| |    
T  21266313 ttctctttatttcaatctaaataagtgattttcacatagatctagggtttt--ctttttgatttcatcatctaagtgtggtggtttgttattcgtcgtct 21266410  T
Q  269 tgtgcggcgttgtttgatttctca-tcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcag 367  Q
    |||||| | || ||| | || ||  ||||  | ||||||| || |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  21266411 tgtgcgacatttttttaattttccgtcttcttgcggtgttcatctgattcatattgaa-gatcgattattcaatcaaagatttgagcatcaacgttgcag 21266509  T
Q  368 atccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||    
T  21266510 atccggaggccatgaatatttcggtgactttagttttatcatatatttttgtaggcatta 21266569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 154 - 427
Target Start/End: Original strand, 48207808 - 48208079
Alignment:
Q  154 cccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtt 253  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||||| | || || |       | ||||||||||||||||||||||||||| ||    
T  48207808 cccctcttcatctttttctcaatatttcaatctaaataagtgattttcacatagatctatgtttttt-ctttgtgatttcatcatctaagtgtggtgatt 48207906  T
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    ||||||||||||| |||||| ||| ||||||||||| | ||||  | ||||||| ||||||||||| ||||| |||| ||||| |||||||||||||| |    
T  48207907 tgttgttcgtcgtcttgtgctgcgctgtttgatttcccgtcttcttgcggtgttcatttgattcattttgaa-gatccattatacaatcaaagatttggg 48208005  T
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  48208006 cgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgttggcatta 48208079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 84 - 427
Target Start/End: Complemental strand, 1485496 - 1485154
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    ||||||||||||| |||| | || |||||||||  |||||||||||||| || | || | |  |||| ||||  |||||||||||||||||||| |||||    
T  1485496 ctctctaggttttctcttcccgtttcttcattggggggtggttttgggttaattcttgacctaaaatcacccg-tcttcatctttttctctctatttcaa 1485398  T
Q  184 tctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgttt 283  Q
    ||||||||||||| ||||||| | || |||        | ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  1485397 tctaaataagtgactttcacatagatctag-attttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgttt 1485299  T
Q  284 gatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaa 383  Q
    | |||| ||||||  | |||| || |||| ||||  ||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||||||||| |    
T  1485298 gttttcccatcttcttgcggtattcattttattccaattgaaaaatcgattattcaatcaaagatttggacgtcaacattgcagatccggaggccatgga 1485199  T
Q  384 tattccggtcactttaa-ttttatcatatatttttgtaggcatta 427  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  1485198 tattccggtgactttaatttttttcatatatttttgtaggcatta 1485154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 158 - 413
Target Start/End: Original strand, 42408272 - 42408527
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    ||||||||||||||||| || |||||||||||||| || ||||||||   || ||||       | ||||||||||||||| ||||||||||||||||||    
T  42408272 tcttcatctttttctctttatttcaatctaaataattgtttttcacatggatctaggtttttttctttgtgatttcatcatttaagtgtggtggtttgtt 42408371  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    ||||||||| |||||| ||||||||||||||  | |||| || |||| || ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42408372 gttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtattcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtc 42408471  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatat 413  Q
    ||||||||||||||| | |||||| |||||||| ||||||||||||||||||||||    
T  42408472 aacgttgcagatccgaatgccatggatattccgatcactttaattttatcatatat 42408527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 231 - 427
Target Start/End: Original strand, 23786558 - 23786754
Alignment:
Q  231 ttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||  | ||||||| ||||||||||||||||||||||    
T  23786558 ttcatcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 23786657  T
Q  331 gattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||| | |||||||||| ||||||| |||| |||| ||||||| |||||||||||||||||||||||||||||| ||||||    
T  23786658 gattattcaatcaaagatttaaacgtcaacgttccagatcccgaggtcatggatattcctgtcactttaattttatcatatatttttgtatgcatta 23786754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 158 - 427
Target Start/End: Complemental strand, 45199198 - 45198931
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    ||||||||||||||||| || || ||| ||||||||||||||||| | | || || |       | ||||||||||||||||||||||||||||||||||    
T  45199198 tcttcatctttttctctatattttaatttaaataagtgattttcatatagatctaag-ttttttctttgtgatttcatcatctaagtgtggtggtttgtt 45199100  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    ||||||||| |||||||||| ||||||||||| | ||||  | ||||||| || |||||||| ||| ||||||| ||||||||||||||||||| |||||    
T  45199099 gttcgtcgttttgtgcggcgctgtttgatttcccgtcttcttgcggtgttcatctgattcattttg-aagatcggttattcaatcaaagatttgggcgtc 45199001  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||    
T  45199000 aacgttgcagatccggaggccatggatattccggtcactttgattttatcatatatttttgtaggtatta 45198931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 252 - 427
Target Start/End: Original strand, 32684672 - 32684847
Alignment:
Q  252 tttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttg 351  Q
    ||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  32684672 tttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttg 32684771  T
Q  352 agcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
     ||||||||||| |||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  32684772 ggcgtcaacgttacagatctggaggccatggatattccggtcactttagttttatcatatatttttgtaggcatta 32684847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 119 - 427
Target Start/End: Complemental strand, 23425576 - 23425271
Alignment:
Q  119 gggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnn 218  Q
    ||||||||||||||||| | || | | ||||| ||||| ||||||||||||||||| || |||||||||||||||||||||| ||| | || ||||        
T  23425576 gggtggttttgggtcaattcttgacctgaaatcacccc-tcttcatctttttctctatatttcaatctaaataagtgatttttacatagatctaggtttt 23425478  T
Q  219 nnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattca 318  Q
       | ||||||||||||||| ||||||||||||||||||||||||||| |||||||| | ||||||||||| | ||||  | ||||||| || ||||| |    
T  23425477 tt-ctttgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtgcggtgctgtttgatttcccgtcttcttgcggtgttcatctgattta 23425379  T
Q  319 tattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttg 418  Q
    | ||||| ||||||||||| || |||||||||| || |||| ||||||||||||||||||||| ||||||  ||||||||| ||||||||||||||||||    
T  23425378 ttttgaa-gatcgattattaaaacaaagatttgggcatcaatgttgcagatccggaggccatggatattctagtcactttacttttatcatatatttttg 23425280  T
Q  419 taggcatta 427  Q
    |||||||||    
T  23425279 taggcatta 23425271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 224 - 427
Target Start/End: Original strand, 34773687 - 34773890
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    |||| |||| ||||||||||||||||| |||||| |||||||| || |||||||||||||||||||   ||||  | ||||||| |||||||||||||||    
T  34773687 ttgtaatttgatcatctaagtgtggtgatttgttattcgtcgtcttatgcggcgttgtttgatttcctgtcttcttgcggtgttcatttgattcatattg 34773786  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 423  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||    
T  34773787 aaagatcgatcgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccagtcactttaatttcatcatatatttttgtaggc 34773886  T
Q  424 atta 427  Q
    ||||    
T  34773887 atta 34773890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 224 - 427
Target Start/End: Complemental strand, 17223100 - 17222898
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||| |||||||||  | ||||  | || |||| |||||||||||||||    
T  17223100 ttgtgatttcatcatctaagtgtggtgatttgttgttcatcgtcttgtgcggcgtggtttgattttccttcttcatgcg-tgttcatttgattcatattg 17223002  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 423  Q
    ||||||||||||||||||||||||||||   |||||||||||||||  | |||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  17223001 aaagatcgattattcaatcaaagatttggatgtcaacgttgcagatttgaaggccatggatattctggtcactttaattttatcatatatttttgtaggc 17222902  T
Q  424 atta 427  Q
    ||||    
T  17222901 atta 17222898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 154 - 427
Target Start/End: Complemental strand, 31235963 - 31235682
Alignment:
Q  154 cccctcttcatctttttctctctaattcaatctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggt 252  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||| | || ||||       |   |||||||| |||||||||||||| |||    
T  31235963 cccctcttcatctttttctctctatttcaatctaaataagtgatttttcacatagatctaggttttct-ctacgtgatttcgtcatctaagtgtggcggt 31235865  T
Q  253 ttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttga 352  Q
    |||||||||||||| |||||| ||||||||||||||||| | |   | ||||||| |||||||||||||||||||||| ||||||||||||||  |||||    
T  31235864 ttgttgttcgtcgtcttgtgcagcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaatctttga 31235765  T
Q  353 gcgtcaacgttgcagatccggaggc--------catgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||| ||||||||||        ||||  ||||||| |||||||||||||||||| |||||||||||||||||    
T  31235764 gcgtcaacgttgcaaatccggaggcatggaagacatgggtattccgatcactttaattttatcatgtatttttgtaggcatta 31235682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 257 - 420
Target Start/End: Original strand, 19560007 - 19560170
Alignment:
Q  257 tgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgt 356  Q
    |||||||||| |||||||||||||||||||||||||| ||  |   ||||| ||||||||||||||||||||| |||||||||||||||||||||  |||    
T  19560007 tgttcgtcgtcttgtgcggcgttgtttgatttctcattttcttgatgtgttcatttgattcatattgaaagattgattattcaatcaaagatttggacgt 19560106  T
Q  357 caacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgta 420  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19560107 caaccttgcagatccggagaccatgaatattccggtcactttaattttatcatatatttttgta 19560170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 84 - 427
Target Start/End: Original strand, 6001857 - 6002208
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaaggg-tggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattca 182  Q
    |||| |||||||| |||| || | |||| ||||||||| || |||||| |||| |||| | | ||||| ||||  |||||||||||||||| ||| || |    
T  6001857 ctctttaggttttctcttccattttctttattgaaggggtgattttggatcaatttttgacctgaaatcaccca-tcttcatctttttctccctatttta 6001955  T
Q  183 atctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgt 281  Q
    |||||||||||||||||| |||| | || ||||       |   |||||||| |||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  6001956 atctaaataagtgatttttcacatagatttaggttttct-ctacgtgatttcgtcatctgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgt 6002054  T
Q  282 ttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatcc--------gg 373  Q
    |||||||||| | |     ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||        ||    
T  6002055 ttgatttctcgtatcgtcgcggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccgaaggtatgg 6002154  T
Q  374 aggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    | | ||||| |||||||||||| ||||||||||||| |||||||||||||||||    
T  6002155 aagacatgagtattccggtcaccttaattttatcatgtatttttgtaggcatta 6002208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 158 - 427
Target Start/End: Original strand, 35261207 - 35261476
Alignment:
Q  158 tcttcatctttttctc-tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttg 255  Q
    |||||||||||||||  || | ||||||| |||||||||||||||||| |||| |||         ||| |||||||| ||||| ||||||||| || ||    
T  35261207 tcttcatctttttctagtccatttcaatccaaataagtgattttcacataaatttagattttttttcttcgtgatttcgtcatccaagtgtggttgtgtg 35261306  T
Q  256 ttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcg 355  Q
    ||||||||||| |  ||| || || ||||||||  | |||| || | ||||| |||||||||||||| |||||||||||||||||||||||||||   ||    
T  35261307 ttgttcgtcgtctcctgcagcattatttgattttccgtctttgtgc-gtgttcatttgattcatattaaaagatcgattattcaatcaaagatttagacg 35261405  T
Q  356 tcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  35261406 tcaatgttgcagatccggagg-catgtgtattccggtcactttaattttatcatatatttttgtaggcatta 35261476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 427
Target Start/End: Complemental strand, 7640873 - 7640673
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatatt- 322  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||||| ||||||||||| |||| ||||||  | ||    | |||| ||||| |||     
T  7640873 ttgtgatttcatcatctaagtgtggtggtttgttgctcgtcgccttgtgaggcgttgtttgctttcccatcttcttgcg----tcattttattcacattt 7640778  T
Q  323 gaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtagg 422  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||| ||| ||| | |||| |||||| |||||||||||||| ||||||||||||| ||||    
T  7640777 gaaagatcgattattcaatcaaatatttgggcgtcaacattgcaaatctggatgtcatggatattctggtcactttaatttcatcatatatttttatagg 7640678  T
Q  423 catta 427  Q
    |||||    
T  7640677 catta 7640673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 318 - 427
Target Start/End: Complemental strand, 13592515 - 13592407
Alignment:
Q  318 atattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatattttt 417  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  ||||| ||||||||||||||||||||||||||||    
T  13592515 atattggaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggatg-catgggtattctggtcactttaattttatcatatattttt 13592417  T
Q  418 gtaggcatta 427  Q
    ||||||||||    
T  13592416 gtaggcatta 13592407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 236 - 427
Target Start/End: Complemental strand, 32522016 - 32521827
Alignment:
Q  236 catctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgatta 335  Q
    ||||| |||||||| || ||||||||||| | |||||||||||||||||||||  | | ||  |  |||||| |||||||||||||||||||||| ||||    
T  32522016 catctgagtgtggttgtgtgttgttcgtcatcttgtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaaagatcaatta 32521917  T
Q  336 ttcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||  || |||| ||||| | ||||  || ||||| |||||| | |||||| ||||||||||||||||||||||||||||    
T  32521916 ttcaatcaaagatttaggcatcaatgttgctgttccg--gggcatgagtattccagacacttttattttatcatatatttttgtaggcatta 32521827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 427
Target Start/End: Original strand, 20083240 - 20083517
Alignment:
Q  157 ctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatat--aggnnnnnnnccttgtgatttcatcatctaagtgtggtggttt 254  Q
    |||||||||||||||| |||| |||||||||||||||  ||||||||| | ||||  |||       | |  |||||||  |||||||||||| |||| |    
T  20083240 ctcttcatctttttctttctatttcaatctaaataagcaattttcacatatatatctaggtttttttcttcatgatttcgacatctaagtgtgatggtgt 20083339  T
Q  255 gttg-----ttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatt 349  Q
    ||||     || ||||| ||||| | |||||||||||||| | ||||  | ||||||| | ||| || || |||||||||||||| ||||||||||||||    
T  20083340 gttggttaatttgtcgtcttgtgagacgttgtttgatttcccgtcttgttgcggtgttcagttgttttattttgaaagatcgatt-ttcaatcaaagatt 20083438  T
Q  350 tgagcgtcaacgttgcagatccggaggcca-tgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    || |||||||||||||| |||||||| |   ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  20083439 tgggcgtcaacgttgcatatccggagacatgtgagtattccggtcactttagttttatcatatatttttgtaggcatta 20083517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 227 - 420
Target Start/End: Complemental strand, 46818514 - 46818324
Alignment:
Q  227 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 326  Q
    ||||||| |||||  ||||||| |||  ||||||||   | |||||||||||||||||||||||| | ||  | ||||||| |||| ||||||||| |||    
T  46818514 tgatttcgtcatccgagtgtggcggtgcgttgttcgaaatcttgtgcggcgttgtttgatttctcgtattgttgcggtgttcatttaattcatattaaaa 46818415  T
Q  327 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgta 420  Q
    |||||||| |||| ||||||| ||| ||| ||||||||||||||| || | ||||  ||||||| |||||||||||||||||||||||||||||    
T  46818414 gatcgattgttcagtcaaagaattg-gcg-caacgttgcagatccaga-gtcatgtgtattccgttcactttaattttatcatatatttttgta 46818324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 226 - 357
Target Start/End: Original strand, 17611103 - 17611234
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    |||||||| |||||  ||||||||||| |||| |||||||| |||||||| ||||||||||||    ||||  | | ||||| |||||||||||||||||    
T  17611103 gtgatttcgtcatccgagtgtggtggtgtgttattcgtcgtcttgtgcggagttgtttgattttctgtcttgttgcagtgttcatttgattcatattgaa 17611202  T
Q  326 agatcgattattcaatcaaagatttgagcgtc 357  Q
    |||| |||||||||||||||||||||||||||    
T  17611203 agattgattattcaatcaaagatttgagcgtc 17611234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 84 - 204
Target Start/End: Original strand, 32684522 - 32684641
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    ||||||||||||| |||||| || |||||||||| ||||||||||||||||| | || | | ||||| ||    |||||||| ||||||||||| |||||    
T  32684522 ctctctaggttttctcttacggtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacatg-tcttcatcgttttctctctatttcaa 32684620  T
Q  184 tctaaataagtgattttcaca 204  Q
    |||||||||||||||||||||    
T  32684621 tctaaataagtgattttcaca 32684641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 36143711 - 36143821
Alignment:
Q  92 gttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaata 191  Q
    |||||||||| | || | |||||||| |||| ||||||| ||||||||| |   ||||||| ||  ||||||||||||||||||||||||||||||||||    
T  36143711 gttttttctttccgttttttcattgaggggttgttttggatcaaattttaacgtgaaattatcca-tcttcatctttttctctctaattcaatctaaata 36143809  T
Q  192 agtgattttcac 203  Q
    |||| |||||||    
T  36143810 agtgtttttcac 36143821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 426
Target Start/End: Complemental strand, 46244292 - 46244171
Alignment:
Q  302 ggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaat 401  Q
    |||||| ||||| ||| |||||||| |||| ||||||| |||| |||||||||||||||||||||| | | || | |||  |||||  ||||||||||||    
T  46244292 ggtgttcatttggttcctattgaaaaatcggttattca-tcaatgatttgagcgtcaacgttgcaggttc-gaagacattgatattttggtcactttaat 46244195  T
Q  402 tttatcatatatttttgtaggcatt 426  Q
    |||||||||| | ||||||||||||    
T  46244194 tttatcatat-tatttgtaggcatt 46244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 3266540 - 3266590
Alignment:
Q  279 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  3266540 tgtttgatttctcgtcttagtacggtgtttatttgattcaggttgaaagat 3266590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 425
Target Start/End: Complemental strand, 17499670 - 17499581
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 425  Q
    ||||||||||||||||| || ||||||||| |||||   ||   | || |||||| |||||||||||||||||||||||||||||||||||    
T  17499670 attcaatcaaagatttgggcatcaacgttggagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcat 17499581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 425
Target Start/End: Original strand, 17553544 - 17553633
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 425  Q
    ||||||||||||||||| || ||||||||| |||||   ||   | || |||||| |||||||||||||||||||||||||||||||||||    
T  17553544 attcaatcaaagatttgggcatcaacgttggagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcat 17553633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 309 - 411
Target Start/End: Complemental strand, 43369788 - 43369687
Alignment:
Q  309 atttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatca 408  Q
    ||||| ||| |||||||||||||  ||||||||||| | |||   | ||||||||||||||||||| || |||| |||||  ||||||||||||||||||    
T  43369788 atttggttcctattgaaagatcggctattcaatcaatggttttgtcatcaacgttgcagatccggatgc-atgagtattctagtcactttaattttatca 43369690  T
Q  409 tat 411  Q
    |||    
T  43369689 tat 43369687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 326
Target Start/End: Complemental strand, 969578 - 969478
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    ||||||||||| | | | ||||| | | ||||||||||||| || ||||||||||||||||||  | ||||| | |||||||| |||| |||||||||||    
T  969578 gtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttattgcggtgtttgtttggttcatattgaa 969479  T
Q  326 a 326  Q
    |    
T  969478 a 969478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 9785473 - 9785521
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  9785473 tttgatttctcatcttagtgcggtgtttatttgattcaggttgaaagat 9785521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 45457521 - 45457473
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  45457521 tttgatttctcgtcttagtacggtgtttatttgattcaggttgaaagat 45457473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 5546277 - 5546320
Alignment:
Q  166 tttttctctctaattcaatctaaataagtgattttcacaaaaat 209  Q
    |||||||||||| |||||||||||||||||||||||||| ||||    
T  5546277 tttttctctctatttcaatctaaataagtgattttcacataaat 5546320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 427
Target Start/End: Original strand, 17611245 - 17611288
Alignment:
Q  384 tattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| |||||| ||||||||||||||||||||||||||||||||    
T  17611245 tatttcggtcattttaattttatcatatatttttgtaggcatta 17611288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 37837588 - 37837533
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    |||||||||||||||||||||| || | | ||||||||||||| ||||||||||||    
T  37837588 ttgtgatttcatcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 37837533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 296
Target Start/End: Original strand, 28476211 - 28476253
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 296  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  28476211 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatctt 28476253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 17499760 - 17499696
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgattt 288  Q
    ||||||||||||||||||||||| ||||| | ||||||  ||| ||||||| | |||||||||||    
T  17499760 ttgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgtttgattt 17499696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 288
Target Start/End: Original strand, 17553454 - 17553518
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgattt 288  Q
    ||||||||||||||||||||||| ||||| | ||||||  ||| ||||||| | |||||||||||    
T  17553454 ttgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgtttgattt 17553518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 22743027 - 22743063
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    |||||||||| ||||||||||||||||||||||||||    
T  22743027 attcaatcaatgatttgagcgtcaacgttgcagatcc 22743063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 36579306 - 36579258
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| |||||||||||||||||| ||||||||||    
T  36579306 tttgatttcccgtcttagtgcggtgtttatttgattcagattgaaagat 36579258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 332
Target Start/End: Complemental strand, 3267327 - 3267237
Alignment:
Q  239 ctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcga 332  Q
    ||||||| || | ||||||||||||||| ||||||| ||||   ||||||| | |||||  ||||||||  ||| |||||||||||||||||||    
T  3267327 ctaagtgcggcgttttgttgttcgtcgtcttgtgcgacgtt---tgatttcgcgtcttatcacggtgttcgtttaattcatattgaaagatcga 3267237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 3394434 - 3394497
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttc 289  Q
    ||||||||||| ||| |||| |||| | ||||||||||||| ||||| || |||||||||||||    
T  3394434 gtgatttcatcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgtggtgttgtttgatttc 3394497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 8001676 - 8001621
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    |||||||||| || |||||||| || | ||||||||||||||| ||||||||||||    
T  8001676 ttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 8001621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 9450267 - 9450212
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    |||||||||| || ||||||||||| | | ||||||||||||| ||||||||||||    
T  9450267 ttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtt 9450212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 289
Target Start/End: Original strand, 22742928 - 22742963
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttc 289  Q
    ||||||||||||| ||||||||||||||||||||||    
T  22742928 tgttgttcgtcgtcttgtgcggcgttgtttgatttc 22742963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 289
Target Start/End: Complemental strand, 24350944 - 24350909
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttc 289  Q
    ||||||||||||| ||||||||||||||||||||||    
T  24350944 tgttgttcgtcgtcttgtgcggcgttgtttgatttc 24350909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 41288110 - 41288160
Alignment:
Q  279 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||  | ||||||||||||||||||||||||||  |||||||||    
T  41288110 tgtttgattttccgtcttagtacggtgtttatttgattcaggttgaaagat 41288160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 426
Target Start/End: Complemental strand, 13796935 - 13796848
Alignment:
Q  337 tcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    |||| ||| ||||||| ||||||||||||||||||||| | ||||| ||||  ||| |||| | ||||||||||| | ||||||||||||    
T  13796935 tcaaccaatgatttgaccgtcaacgttgcagatccggaag-catgagtatttaggtgacttaagttttatcatat-tatttgtaggcatt 13796848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 318
Target Start/End: Original strand, 36253086 - 36253123
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattca 318  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  36253086 tttgatttcccatcttaggacggtgtttatttgattca 36253123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 1281102 - 1281054
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  1281102 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 1281054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 1749254 - 1749214
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 294  Q
    ||||||||||||| ||||||||| |||||||||||| ||||    
T  1749254 tgttgttcgtcgtcttgtgcggcattgtttgatttcgcatc 1749214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 2622752 - 2622796
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||| |||||| || |||||||||||||||||| ||||||||||    
T  2622752 atttcccatctttgtgcggtgtttatttgattcaaattgaaagat 2622796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 7640929 - 7640893
Alignment:
Q  178 attcaatctaaataagtgattttcacaaaaatatagg 214  Q
    ||||||||||||||||||||||||||| | |||||||    
T  7640929 attcaatctaaataagtgattttcacatagatatagg 7640893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 10094597 - 10094645
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  10094597 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 10094645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 10574549 - 10574585
Alignment:
Q  293 tcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  10574549 tcttagttcggtgtttatttgattcatgttgaaagat 10574585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 11833178 - 11833222
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||||    
T  11833178 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 11833222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 411
Target Start/End: Complemental strand, 19404765 - 19404690
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    |||||||||| |||||| ||||||| |||||||||||||| | ||||| |||| | || ||||  ||||||||||||    
T  19404765 attcaatcaatgatttgggcgtcaatgttgcagatccggaag-catgagtatttcagtgacttagattttatcatat 19404690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 21603616 - 21603664
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  21603616 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 21603664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 21990818 - 21990866
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  21990818 tttgatttcccgtcttagtgcggtgtttatttgattcagcttgaaagat 21990866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 24350847 - 24350811
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    |||||||||| |||||| |||||||||||||||||||    
T  24350847 attcaatcaatgatttgggcgtcaacgttgcagatcc 24350811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 330
Target Start/End: Complemental strand, 26623920 - 26623817
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    ||||||||||||| ||| |||| || | | ||||||||||||| |||| ||||   |||||||||  ||||||  | |||||||| |||| ||| |||||    
T  26623920 ttgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtacggc---gtttgattttgcatcttgttgcggtgtttgtttggttcctattg 26623824  T
Q  324 aaagatc 330  Q
    |||||||    
T  26623823 aaagatc 26623817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 27050424 - 27050380
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||| ||||||| ||||||||||||||||||| | |||||||    
T  27050424 atttctcgtcttagtgcggtgtttatttgattcatgtcgaaagat 27050380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 35132931 - 35132971
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 294  Q
    ||||||||||||| |||| ||||||||||||||||| ||||    
T  35132931 tgttgttcgtcgtcttgttcggcgttgtttgatttcacatc 35132971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 35133030 - 35133066
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    |||||||||| |||||| |||||||||||||||||||    
T  35133030 attcaatcaatgatttgggcgtcaacgttgcagatcc 35133066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 41553537 - 41553461
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| ||||| | |||| ||||||||| | ||||  || ||||||  |||| ||||||||||||||||    
T  41553537 tgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatc 41553461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 41553882 - 41553806
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| ||||| | |||| ||||||||| | ||||  || ||||||  |||| ||||||||||||||||    
T  41553882 tgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatc 41553806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 46700118 - 46700193
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    |||||||||| |||||| || ||| ||||||||||||||| | |||| ||||| |||| ||||  ||||||||||||    
T  46700118 attcaatcaatgatttgggcatcagcgttgcagatccggaag-catggatatttcggtgacttagattttatcatat 46700193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 48304354 - 48304310
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||||    
T  48304354 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 48304310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 48930757 - 48930797
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 294  Q
    |||| |||||||| |||||||||||||||||||||| ||||    
T  48930757 tgttattcgtcgtcttgtgcggcgttgtttgatttcgcatc 48930797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 206; Significance: 1e-112; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 25162256 - 25162612
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||| ||| ||||||||||| ||||| | || ||  ||||| ||||  |||||||||||    
T  25162256 cggctctagttttctctctctaggttttctcttacagtttcttcactgaggggtggttttgtgtcaattcttgatttgaaatcaccca-tcttcatcttt 25162354  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    ||||||||| ||||||||||||||||||||| |||| | || ||||       | |||||||||||||||||||||||||| |||||||||||||||| |    
T  25162355 ttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtagtttgttgttcgtcgtct 25162453  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||||||||||||||||||||| |||||| || ||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25162454 tgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttgtttcatattgaaagatcgattattcaatcaaagatttgaccgtcaacgttgcaga 25162553  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25162554 tccggaggtaatggatattccggtcactttaattttatcatatatttttgtaggcatta 25162612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 65 - 427
Target Start/End: Original strand, 4178380 - 4178741
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||| |||||||||||||||||||| || |||||||||| ||||||||||||||||| | || | |  |||| ||||  |||||||    
T  4178380 aagtcggccctagttttctctctctaggttttttcttactgtttcttcattgaggggtggttttgggtcaattcttgacctaaaatcaccca-tcttcat 4178478  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 264  Q
    ||||||||||||| |||||||||||||||||||||||| | |||| |||        | |||||||||||||||||||||||||||||||||| ||| ||    
T  4178479 ctttttctctctatttcaatctaaataagtgattttcagataaatctagctttttttctttgtgatttcatcatctaagtgtggtggtttgtttttcatc 4178578  T
Q  265 gtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttg 364  Q
    || |||||||||||||||| ||||| | |||| || ||||||| |||||||| ||||||||||||| ||||||||| |||||||||| |||||||| |||    
T  4178579 gtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaaagatccattattcaaacaaagatttgggcgtcaacattg 4178678  T
Q  365 cagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  4178679 cagatccggaggccatggatattccggtcactttaattttatcatatatttttctaggcatta 4178741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 75 - 427
Target Start/End: Complemental strand, 39917645 - 39917296
Alignment:
Q  75 tagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctct 174  Q
    |||||||| |||||||||||||  |||||||| |||||| ||| | ||||||||||||||| | || | | ||||| | ||  ||||||| |||||||||    
T  39917645 tagttttctctctctaggttttcccttacagtttcttcactgaggagtggttttgggtcaattcttgacctgaaatcatcca-tcttcatatttttctct 39917547  T
Q  175 ctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcg 274  Q
    |||||||||||||||||||||||||||||| | || ||||       |||||||||||||||||||||||||||||||||||||||||| || |||| ||    
T  39917546 ctaattcaatctaaataagtgattttcacatagatctaggtttttt-ccttgtgatttcatcatctaagtgtggtggtttgttgttcgttgtcttgtacg 39917448  T
Q  275 gcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgga 374  Q
     ||||||||||||| || |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39917447 acgttgtttgattt-tcgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgaccgtcaacgttgcagatccgga 39917349  T
Q  375 ggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    || |||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  39917348 ggtcatggatattccagtcactttaattttatcatatatttttgtaggcatta 39917296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 74 - 427
Target Start/End: Complemental strand, 25631777 - 25631424
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||| ||||||||||||| ||||||  | |||||||||| ||||||||||||||||| |||| | |  |||| | ||| ||| ||||||||||||    
T  25631777 ctagttttctctctctaggttttctcttactatttcttcattgaggggtggttttgggtcaatttttgacctaaaatcatccc-tctccatctttttctc 25631679  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtg 272  Q
    |||| |||||||||||||||||||||||||| | || ||||        ||| ||||||||||||||||||||||||||||||||||||  ||| |||||    
T  25631678 tctatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttctccgtcttgtg 25631579  T
Q  273 cggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccg 372  Q
    ||||||||||| ||||| | |||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  25631578 cggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgtagatccg 25631479  T
Q  373 gaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    || |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25631478 gatgccatggatattccggtcactttaattttatcatatatttttgtaggcatta 25631424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 65 - 425
Target Start/End: Original strand, 46934458 - 46934816
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||| ||||| ||||||||||||| ||||  | | |||||||||| |||||||||| |||||| |||| | | ||||| ||||| |||||||    
T  46934458 aagtcggccctaattttctctctctaggttttctcttctactttcttcattgaggggtggtttttggtcaatttttgacctgaaatcacccc-tcttcat 46934556  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgt-gatttcatcatctaagtgtggtggtttgttgttcgt 263  Q
    |||| |||||||| |||||||||||||||||||||||||| | ||  |||        ||||| ||||||||||||||||||||||||||||||||||||    
T  46934557 ctttctctctctatttcaatctaaataagtgattttcacatagatccaggtttttt--cttgttgatttcatcatctaagtgtggtggtttgttgttcgt 46934654  T
Q  264 cgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgtt 363  Q
    ||| |||||||| ||||||||||||| | ||||  | ||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||| ||    
T  46934655 cgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaacgatttgggcgtcaacatt 46934754  T
Q  364 gcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 425  Q
    ||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||    
T  46934755 gcagatccggagttcatggatattccggtcactttaattttatcatatatttttgtaggcat 46934816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 32607287 - 32607645
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaaggg-tggttttgggtcaaatttttatcggaaattaccccctcttcatctt 167  Q
    |||| ||||||||| |||||||| |||| ||||||| | |||||||||| ||| |||||||||||||| | || | | |||||   |||||||||||| |    
T  32607287 cggccctagttttctctctctagattttctcttacaatttcttcattgagggggtggttttgggtcaattcttgacctgaaata--cccctcttcatcat 32607384  T
Q  168 tttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 266  Q
    ||||||| || |||||||||||||||||||||||||| | || ||||        ||| || |||||||||||||||||||||| |||||||||||||||    
T  32607385 tttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgt 32607484  T
Q  267 attgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgca 366  Q
     ||||| |||||||||||||||| | |||| || ||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  32607485 cttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagattgattgttcaatcaaagatttgggcgtcaacgttgca 32607584  T
Q  367 gatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  32607585 gatccggaggcaatgaatattccgatcactttaatttcatcatatatttttgtaggcatta 32607645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 65 - 427
Target Start/End: Original strand, 36905937 - 36906298
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||| ||||| ||||||||||||| ||||||| | |||||||||| || |||||||||||||| | || | | ||||| ||||  |||||||    
T  36905937 aagtcggccctaattttctctctctaggttttctcttacaatttcttcattgatggatggttttgggtcaattcttgacctgaaatcaccct-tcttcat 36906035  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 264  Q
    |||||||||| || |||||| ||||||||||||||||||| | || ||||       | |||| |||||||||||||||||||||| |||||||||||||    
T  36906036 ctttttctctttatttcaatataaataagtgattttcacatagatttaggtttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtc 36906135  T
Q  265 gtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttg 364  Q
    || |||||||||||||||||||||| | |||| ||   ||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||    
T  36906136 gtcttgtgcggcgttgtttgatttcccgtcttcgtgtagtgttcatttgattcatattgaaagatcaattgttcaatcaaagatttgggcgtcaacgttg 36906235  T
Q  365 cagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||| ||||||||| ||  ||||||| ||||||||||||| |||||||||||||||||||||||    
T  36906236 cagttccggaggcaatagatattccagtcactttaatttcatcatatatttttgtaggcatta 36906298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 74 - 427
Target Start/End: Complemental strand, 44907649 - 44907297
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||| ||||||||||||| || |||| | ||||| |||| ||||||||||||||||| | || | | ||||| ||||| ||||||||||||||||    
T  44907649 ctagttttctctctctaggttttctcctacaatttcttctttgaggggtggttttgggtcaattcttgacctgaaatcacccc-tcttcatctttttctc 44907551  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtg 272  Q
    | || ||||||||||| |||||||||||||| | || ||||        ||| || |||||||||||||||||||||| ||||||||||||||| |||||    
T  44907550 tttatttcaatctaaacaagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtg 44907451  T
Q  273 cggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccg 372  Q
    || ||||||||||||||  ||||| || ||||||| |||| ||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  44907450 cg-cgttgtttgatttcctatcttcgtgcggtgttcatttaattcatattgaaagatcgattgttcaatcaaatatttgggcgtcaacgttgcagatccg 44907352  T
Q  373 gaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||| | ||||||||||||||||||||||| |||||||||||||||||||||||    
T  44907351 gaggcaacgaatattccggtcactttaatttcatcatatatttttgtaggcatta 44907297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 108 - 427
Target Start/End: Complemental strand, 49552439 - 49552122
Alignment:
Q  108 tcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaa 207  Q
    |||||||||| ||||||||||||||||| | || | | ||||| ||||| |||||||| |||| |||||| |||||||||||||||||| |||||||  |    
T  49552439 tcttcattgatgggtggttttgggtcaattcttgacctgaaatcacccc-tcttcatcattttttctctatttcaatctaaataagtgaatttcacatta 49552341  T
Q  208 atataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtt 307  Q
    || ||||       | ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | ||  | |||||||    
T  49552340 atctaggtttttt-ctttgtgatttcatcatctaaatgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttctcgttttcttgcggtgtt 49552242  T
Q  308 tatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatc 407  Q
     |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||| |||||||    
T  49552241 cattttattcacattgaaagatcgattattcaatcaaagatttgagcatcaacgttgcagatccggaggccatggatattccggtgactttagttttatc 49552142  T
Q  408 atatatttttgtaggcatta 427  Q
    ||||||||||||||||||||    
T  49552141 atatatttttgtaggcatta 49552122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 65 - 427
Target Start/End: Original strand, 12115909 - 12116274
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||||||||||||| ||||||||||||| | ||||| | |||||||||| ||||||||||| ||||| | || | | ||||| | | | |||||||    
T  12115909 aagtcggctctagttttctctctctaggttttcttttacaatttcttcattgaggggtggttttgagtcaattcttgacctgaaatcatctc-tcttcat 12116007  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn---ccttgtgatttcatcatctaagtgtggtggttt-gttgtt 260  Q
    ||||| |||| || |||||||||||||||||||||||||||| || ||||          | |||| ||||||| |||||||||||||| ||| ||||||    
T  12116008 cttttcctctttatttcaatctaaataagtgattttcacaaagatctaggttttttttttctttgtaatttcattatctaagtgtggtgattttgttgtt 12116107  T
Q  261 cgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaac 360  Q
    ||| || |||||||||||||||||||||| | |||| || ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12116108 cgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgagcgtcaac 12116207  T
Q  361 gttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||| ||| ||||||  ||||||||||||| |||||||||||||||||||||||    
T  12116208 gttgcagatccggaggcaatggatattctagtcactttaatttcatcatatatttttgtaggcatta 12116274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 108 - 419
Target Start/End: Complemental strand, 35499418 - 35499104
Alignment:
Q  108 tcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaa 207  Q
    |||||||||| |||||||||| |||||| |||||| | ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||| |     
T  35499418 tcttcattgaggggtggtttttggtcaattttttacctgaaatcaccccctcttcatctttttctctttatttcaatctaaataagtgattttcacatag 35499319  T
Q  208 atataggnnnnnnn---ccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggt 304  Q
    || ||||          | |||| ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||| || ||||    
T  35499318 atctaggttttttttttctttgtaatttcattatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggt 35499219  T
Q  305 gtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatttt 404  Q
    ||| |||||||||||||||||||||||||| |||||||||||||||| |||| ||| ||||| |||||||| | ||| |||||||| ||||||||||||     
T  35499218 gttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgttaacattgcaaatccggagacaatggatattccgatcactttaatttc 35499119  T
Q  405 atcatatatttttgt 419  Q
    |||||||||||||||    
T  35499118 atcatatatttttgt 35499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 158 - 427
Target Start/End: Original strand, 17237710 - 17237981
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn--ccttgtgatttcatcatctaagtgtggtggtttg 255  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||| | || ||||         | ||||||||||||||||||||||||||||||||    
T  17237710 tcttcatctgtttctctctatttcaatctaaataagtgattttcacatagatttaggtttttttttctttgtgatttcatcatctaagtgtggtggtttg 17237809  T
Q  256 ttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcg 355  Q
    ||||| ||||| ||||||||||||||||||| |||  | || |  ||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||    
T  17237810 ttgtttgtcgtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattcatattaaaatatcgattattcaatcaaagatttgggcg 17237909  T
Q  356 tcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  17237910 tcaacgttgcagatccggaggctatggatattccggtcactttaattttattatatatttttgtaggcatta 17237981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 158 - 427
Target Start/End: Original strand, 29503370 - 29503637
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    ||||||| ||||||||| || |||||||||||||| ||||||||||| | || ||||       | ||||||||||||||||||||||||||||||||||    
T  29503370 tcttcatatttttctctatatttcaatctaaataattgattttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgtt 29503468  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    ||||||||| |||||||||| ||||||||||  | ||||  | ||||||| || |||||||| ||||| ||||||||||||||||||||||||| |||||    
T  29503469 gttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgttcatctgattcattttgaa-gatcgattattcaatcaaagatttgggcgtc 29503567  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29503568 aacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggcatta 29503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 74 - 427
Target Start/End: Complemental strand, 38855286 - 38854934
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||| ||||||||||||| ||||||  | |||||||||| ||||||||||||||||  || ||  | |||| |  ||||||||||||||||||||    
T  38855286 ctagttttctctctctaggttttctcttactatttcttcattgaggggtggttttgggtca--ttcttgaccgaaaatcacccctcttcatctttttctc 38855189  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtg 272  Q
    ||||  ||||||||||||||||||||||||| | || |||         ||| |||||||||||||||||||||| ||||||||||||||| || |||||    
T  38855188 tctatatcaatctaaataagtgattttcacatagatctagattttttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgttgtcttgtg 38855089  T
Q  273 cggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccg 372  Q
     |||||||||| || || | || | || ||||||| |||||||| ||||||||||||||||||||||||| || ||||| |||||||||||||| |||||    
T  38855088 tggcgttgtttcatctcccgtcctcgtgcggtgttcatttgatttatattgaaagatcgattattcaatcgaatatttgggcgtcaacgttgcaaatccg 38854989  T
Q  373 gaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||||| |||||    
T  38854988 gaggccattgatattccgggcactttaattttatcatatatttttgtagtcatta 38854934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 51202508 - 51202152
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    ||||||||  |||||||  |||| |||||||| ||||||||| |||| ||||| ||||| ||||||||||| | || | | ||||| ||||  |||||||    
T  51202508 aagtcggccttagttttttctctttaggttttctcttacagtttctttattgaggggtgattttgggtcaattcttgacctgaaatcaccca-tcttcat 51202410  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn--ccttgtgatttcatcatctaagtgtggtggtttgttgttcg 262  Q
     |||||||||||| ||||||||||||       ||||||| | || ||||         | ||||||||||||||||||||||||||||||||||||| |    
T  51202409 atttttctctctatttcaatctaaat-------tttcacatagatctaggtttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttg 51202317  T
Q  263 tcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgt 362  Q
    |||| |||||||||||||||||||||| |||| | || ||||||| ||||||||||||||||||||||  | ||||||||||||||||| ||||||||||    
T  51202316 tcgtcttgtgcggcgttgtttgatttcccatcgtcgtgcggtgttcatttgattcatattgaaagatcagtaattcaatcaaagatttgggcgtcaacgt 51202217  T
Q  363 tgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  51202216 tgcaaatccggaggcgatgaatatcccggtcactttaattttatcatatatttttgtaggcatta 51202152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 110 - 427
Target Start/End: Original strand, 14464368 - 14464686
Alignment:
Q  110 ttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaat 209  Q
    |||||||||||||||||||||||||| | || | | ||||| ||||| | ||||||||||||||| || |||||||||||||||||||||||||| | ||    
T  14464368 ttcattgaagggtggttttgggtcaattcttgacctgaaatcacccc-tattcatctttttctctttatttcaatctaaataagtgattttcacatagat 14464466  T
Q  210 ataggnnnnnnn--ccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtt 307  Q
     || |         | ||||||||||||| ||||||||||||| |||||  ||| |||| | |||||||||||||| ||||| | |||| || |||||||    
T  14464467 ctaagtttttttttctttgtgatttcatcttctaagtgtggtgatttgtcattcatcgtttcgtgcggcgttgtttaatttcccgtcttcgtgcggtgtt 14464566  T
Q  308 tatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatc 407  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || |||| |||||||||||||| ||    
T  14464567 catttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatgttccagtcactttaattttgtc 14464666  T
Q  408 atatatttttgtaggcatta 427  Q
    ||||||||||||||||||||    
T  14464667 atatatttttgtaggcatta 14464686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 69 - 427
Target Start/End: Complemental strand, 50611672 - 50611316
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||||||||||||  |||| || ||||| |||||  || ||||||||||  | |||||||||||||| | || | |  |||| ||||| |||||||||||    
T  50611672 cggctctagttttttctctttaagttttctcttattgtttcttcattgagagatggttttgggtcaattattgacctaaaatcacccc-tcttcatcttt 50611574  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    |||||| || |||||||||||||||||||||||| | | || ||||       | |||||||||||||||||||||||| |||||| ||||||||||| |    
T  50611573 ttctctatatttcaatctaaataagtgattttcatatagatctaggtttttttctttgtgatttcatcatctaagtgtgatggtttattgttcgtcgtct 50611474  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    | |||||||| |||| ||||  | || | || ||||||| |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  50611473 tatgcggcgt-gtttcattttccgtcctcgtgcggtgttcatttgatttatattgaaagatcgattattcaatcgaagatttgggcgtcaacgttgcaga 50611375  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| |||||| |||||||| ||||||||||||| |||||||||||||||    
T  50611374 tccggaggccatggatattcgggtcacttaaattttatcatatgtttttgtaggcatta 50611316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 225 - 427
Target Start/End: Original strand, 42719491 - 42719693
Alignment:
Q  225 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 324  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | |||| || ||||||| ||||||||||||||||    
T  42719491 tgtgagttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattga 42719590  T
Q  325 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 424  Q
    ||||||||||||||||||||||||| |   ||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  42719591 aagatcgattattcaatcaaagattcggaggtcaacgttgcagattcggaggtcgtgaatattccggtcactttaattttatcatatatttttgtaggca 42719690  T
Q  425 tta 427  Q
    |||    
T  42719691 tta 42719693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 225 - 427
Target Start/End: Complemental strand, 3849019 - 3848817
Alignment:
Q  225 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 324  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||  | ||||||| |||| |||| ||||||    
T  3849019 tgtgatttcatcatgtaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccatcttcttgcggtgttcattttattcctattga 3848920  T
Q  325 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 424  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||| ||||||||||    
T  3848919 aagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatagatattccggtgactttaattttatcatatatatttgtaggca 3848820  T
Q  425 tta 427  Q
    |||    
T  3848819 tta 3848817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 224 - 424
Target Start/End: Complemental strand, 30648820 - 30648620
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||  | ||||||| |||| ||||||||||    
T  30648820 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgctttcccatcttcttgcggtgttcattttattcatattg 30648721  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 423  Q
    ||||||||||||||||||||||||||||  ||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  30648720 aaagatcgattattcaatcaaagatttggacgtcaacgttgcaaatccggcggccatgaatatttcggtaactttaattttatcatatatttttataggc 30648621  T
Q  424 a 424  Q
    |    
T  30648620 a 30648620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 100 - 410
Target Start/End: Complemental strand, 38440801 - 38440496
Alignment:
Q  100 ttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattt 199  Q
    ||||||| ||||||||||| |||||||||| ||||| | || | | ||||| || || |||| ||||||||||||||| |||||||||||||||||||||    
T  38440801 ttacagtttcttcattgaatggtggttttgagtcaattcttgacctgaaatcactcc-tctttatctttttctctctatttcaatctaaataagtgattt 38440703  T
Q  200 tcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagt 299  Q
    ||||| | || ||||       | || ||||||||| ||| |||||||||||||||||||||||||| || |  ||||||   |||||| || |||| ||    
T  38440702 tcacatagatctaggtttttt-ctttttgatttcatgatcaaagtgtggtggtttgttgttcgtcgtcttatatggcgtt---tgatttttcgtcttcgt 38440607  T
Q  300 acggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcacttta 399  Q
     |  |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  38440606 gcaatgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacattgcagatctggaggccatgaatattccgatcacttta 38440507  T
Q  400 attttatcata 410  Q
    ||||| |||||    
T  38440506 attttgtcata 38440496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 226 - 427
Target Start/End: Complemental strand, 36734791 - 36734591
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    |||||||| ||||| || |||| |||| ||||||||||||| |||||||||||||||||||||  | ||||| | ||||||| |||||||||||| ||||    
T  36734791 gtgatttcgtcatccaaatgtgatggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgattcataatgaa 36734692  T
Q  326 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 425  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||| |||| |||| ||||||||||||||||||||||||||||||||    
T  36734691 agatcgattattgaatcaaagatttgggcgtcaacgttgcagatctggagg-catgagtatttcggttactttaattttatcatatatttttgtaggcat 36734593  T
Q  426 ta 427  Q
    ||    
T  36734592 ta 36734591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 156 - 427
Target Start/End: Original strand, 22802927 - 22803206
Alignment:
Q  156 cctcttcatctttttctctctaattcaatctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggttt 254  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||  | || ||||       |  |||| |||| |||| | ||||||| |||||    
T  22802927 cctcttcatctttttctctctatttcaatctaaataagtgatttttcacgtagatctaggttttct-ctatgtgctttcgtcatttgagtgtggcggttt 22803025  T
Q  255 gttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagc 354  Q
    |||||||||||| || ||||||||||||||||||||| | |   | ||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  22803026 gttgttcgtcgtcttatgcggcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgagc 22803125  T
Q  355 gtcaacgttgcagatccggaggc--------catgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||||||        ||||  ||||||| |||||||||||||||||| |||||||||||||||||    
T  22803126 gtcaacgttgcagatccggaggcatggaagacatgggtattccgatcactttaattttatcatgtatttttgtaggcatta 22803206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 238 - 427
Target Start/End: Original strand, 21488078 - 21488269
Alignment:
Q  238 tctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattatt 337  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||||| | ||||  | |||||||||||||||||||||||||| ||||||||||    
T  21488078 tctaagtgtggtggtatgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgtttatttgattcatattgaaaaatcgattatt 21488177  T
Q  338 caatcaaagatttgagcgtcaacgttgcagatccggag--gccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||| |||||||||||| ||||| ||||  | |||||  ||||  |||||||||||||||||||||||||||||||||||||    
T  21488178 caatcaaagatttgggcgtcaacgttgtagatctggaggaggcatgagcattctagtcactttaattttatcatatatttttgtaggcatta 21488269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 226 - 425
Target Start/End: Original strand, 31794046 - 31794244
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    |||||||  |||||| ||||| ||||| ||||||||||||| |||||||||||||||||||||   |||||  | ||||||| |||||||||||||||||    
T  31794046 gtgattttgtcatctgagtgtagtggtgtgttgttcgtcgttttgtgcggcgttgtttgattttctatcttgttgcggtgttcatttgattcatattgaa 31794145  T
Q  326 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 425  Q
    |||||||||||||||||||||||||| || |||||||||||||| |||||| ||||| ||||||||||| ||||||||||||||||| | ||||||||||    
T  31794146 agatcgattattcaatcaaagatttgggcatcaacgttgcagattcggagg-catgagtattccggtcagtttaattttatcatatactgttgtaggcat 31794244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 65 - 289
Target Start/End: Original strand, 4172382 - 4172605
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||| |||||||| ||||||||||| || |||||||||| ||||||||||||||||| || ||| |  ||| |   || |||||||    
T  4172382 aagtcggccctagttttctctctctagattttttcttactgtttcttcattgaggggtggttttgggtcaa-ttcttaacataaaatcatccatcttcat 4172480  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 264  Q
    ||||||||||||| |||||||||||||||||||||||||| | || ||||       | |||||||||||||||||||||||||||||||||| ||||||    
T  4172481 ctttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgtttttcgtc 4172580  T
Q  265 gtattgtgcggcgttgtttgatttc 289  Q
    || |||||||| ||||||| |||||    
T  4172581 gtcttgtgcggtgttgtttcatttc 4172605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 310 - 427
Target Start/End: Original strand, 2342522 - 2342639
Alignment:
Q  310 tttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcat 409  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||  ||| |||||||||||||||||||||||||||    
T  2342522 tttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgcaaattcggaggatatggatattccggtcactttaattttatcat 2342621  T
Q  410 atatttttgtaggcatta 427  Q
    ||||||||||||||||||    
T  2342622 atatttttgtaggcatta 2342639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 262 - 427
Target Start/End: Original strand, 25849821 - 25849985
Alignment:
Q  262 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 361  Q
    ||||| |||||| ||||||||| ||||| | ||||  | ||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  25849821 gtcgtcttgtgcagcgttgttttatttcccgtcttcttgcggtgttcatttgattcatattgaaaaatcgattattcaattaaagattttagcgtcaacg 25849920  T
Q  362 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| | |||||||||||| |||||||||| |||||  |||||||||||| ||||||    
T  25849921 ttgcagatccgga-gacatgaatattccagtcactttaactttattgtatatttttgtaagcatta 25849985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 155 - 427
Target Start/End: Original strand, 46178481 - 46178744
Alignment:
Q  155 ccctcttcatctttttctctctaattcaatctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtt 253  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||| | || ||||       | | |||||||| || ||  |||||||||||     
T  46178481 ccctcttcatctttttctctctaattcaatctaaataagtgctttttcacatagatctaggtttttt-cttcgtgatttcgtcttccgagtgtggtggtg 46178579  T
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    | ||||||||| | |||||| | ||||||||  || |        | | ||||| |||||||||||||||||| || ||||||||||||||||| ||| |    
T  46178580 tattgttcgtcatcttgtgcagtgttgtttgtattgt--------tgcagtgttcatttgattcatattgaaatattgattattcaatcaaagaattggg 46178671  T
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||||||| ||||||    
T  46178672 cgtcaacgttgcagatccggagg-catgggtattccggtcacttttattttatcatatatttttgtaagcatta 46178744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 89 - 287
Target Start/End: Original strand, 2342332 - 2342528
Alignment:
Q  89 taggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaa 188  Q
    |||||||| ||||||||| ||||| |||| ||||||||||||||||| | |  | | |||   ||||  |||||||||||||||||||| ||||||||||    
T  2342332 taggttttctcttacagtttcttcgttgaggggtggttttgggtcaattctaaacctgaatcaaccc--tcttcatctttttctctctatttcaatctaa 2342429  T
Q  189 ataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatt 287  Q
    |||||||||||||||| | || ||         | |||||||||||||||||||||||||||||||||| ||||| || | ||||||||||||||||||    
T  2342430 ataagtgattttcacatatatctatatttttttctttgtgatttcatcatctaagtgtggtggtttgttattcgttgtctagtgcggcgttgtttgatt 2342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 226 - 415
Target Start/End: Complemental strand, 6910802 - 6910622
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    ||||||||||||||||||||||||||| | || |||||||| |||||||  ||||||||||||  | |  |      ||||| |||||||||||||||||    
T  6910802 gtgatttcatcatctaagtgtggtggtatattattcgtcgttttgtgcgatgttgtttgattttccgttat------gtgttcatttgattcatattgaa 6910709  T
Q  326 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatattt 415  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||  ||| | ||||  |||||| |||| ||||||||||||||||||||    
T  6910708 agatcgattattcaatcatagatttgagcgtcaatgttgtagatatgga-gacatg--tattccagtcaatttaattttatcatatattt 6910622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 332 - 421
Target Start/End: Original strand, 21916555 - 21916643
Alignment:
Q  332 attattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtag 421  Q
    |||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||| |||||||||||||||||||||||||||||||||    
T  21916555 attattcaatcaaa-atttgagcgtcaacgttgcagatccggaaaccatggatatttcggtcactttaattttatcatatatttttgtag 21916643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 84 - 427
Target Start/End: Original strand, 37169068 - 37169405
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    ||||||||||||||||    ||| |||||||||| ||||| |||||| |||| |||||| | ||||| ||| | |||||| |||||||||||||||||||    
T  37169068 ctctctaggttttttca---agtttcttcattgaggggtgattttggatcaattttttacctgaaatcacctc-tcttcacctttttctctctaattcaa 37169163  T
Q  184 tctaaataagtga-ttttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtt 282  Q
    | ||||||||||| |||||||| | || || |       | |  ||||||| ||| |  |||||| |||| |||||| |||||| |||||| ||||||||    
T  37169164 tataaataagtgatttttcacatagatcta-gattttttcttcttgatttcgtcacccgagtgtgatggtctgttgtccgtcgtcttgtgcagcgttgtt 37169262  T
Q  283 tgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatga 382  Q
    ||||||  | | ||  | ||||| | ||||||||||||| | |||||| |||||||||| ||||| ||   ||||||||||||||||||||| |  |||     
T  37169263 tgattttccgtattgttgcggtgctcatttgattcatatcg-aagatcaattattcaattaaagaattagacgtcaacgttgcagatccgga-gatatgt 37169360  T
Q  383 atattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
     ||||||  ||| |||||||| |||||||||||||||||||||||    
T  37169361 gtattccaatcattttaatttgatcatatatttttgtaggcatta 37169405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 3850626 - 3850576
Alignment:
Q  154 cccctcttcatctttttctctctaattcaatctaaataagtgattttcaca 204  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  3850626 cccctcttcatctttttctctctatttcaatctaaataagtgactttcaca 3850576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 12947377 - 12947305
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 326  Q
    ||||||||||||| |||||||||||||||||||||| ||||||  |  ||||||  |||| ||||||||||||    
T  12947377 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttggttcatattgaaa 12947305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 39610364 - 39610414
Alignment:
Q  279 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||||| |||||||||| ||||||||||||| | ||||||||||    
T  39610364 tgtttgatttctcgtcttagtacgttgtttatttgatttagattgaaagat 39610414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 21488019 - 21488064
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcac 203  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||    
T  21488019 tcttcatctttttctctccatttcaatctaaataagtgactttcac 21488064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 411
Target Start/End: Complemental strand, 30293575 - 30293419
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    ||||||||||||| ||| |||  ||||||||||||  ||||||  |   || || ||||||||| || |||||||   | ||||||||||| ||||||||    
T  30293575 tgttgttcgtcgtcttgcgcgatgttgtttgattttccatcttgttgtagtattcatttgattcctactgaaagacaaactattcaatcaatgatttgag 30293476  T
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
     ||||| |||||| || |||| | ||||| |||| ||||||| |||| ||||||||||    
T  30293475 agtcaatgttgcaaattcggatg-catgagtatttcggtcacattaactttatcatat 30293419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 36735389 - 36735277
Alignment:
Q  87 tctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatct 186  Q
    |||| ||||| ||||  ||| ||||||||||  ||||||||| |||||| |||||| | ||||| | ||| ||||||| ||| ||||| || |||||| |    
T  36735389 tctaagttttctcttctagtttcttcattgagaggtggtttttggtcaattttttacctgaaatcatccc-tcttcatttttctctctatatttcaattt 36735291  T
Q  187 aaataagtgatttt 200  Q
    ||||||||||||||    
T  36735290 aaataagtgatttt 36735277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 29249218 - 29249294
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    |||||||| |||| |||||| ||||| |||||||||  |||||| |  |||||| ||||||||||| ||||||||||    
T  29249218 tgttgttcatcgttttgtgcagcgttctttgatttcgaatcttattgtggtgttcatttgattcatcttgaaagatc 29249294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 40013245 - 40013197
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||||||    
T  40013245 tttgatttcccatcttagtgcggtgtttatttgattcaggttgaaagat 40013197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 42167982 - 42167938
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||    
T  42167982 atttctcatcttagtgtggtgtttatttgattcagattgaaagat 42167938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 45047670 - 45047718
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||||| ||||| |||||||||||| ||||| ||||||||||    
T  45047670 tttgatttctcattttagtgcggtgtttattttattcagattgaaagat 45047718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 409
Target Start/End: Original strand, 6902959 - 6903049
Alignment:
Q  318 atattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcat 409  Q
    ||||||||||||| | ||||||||||| ||||||| || |||| ||| ||||||  ||| |||||||||| | |||| ||||| ||||||||    
T  6902959 atattgaaagatcaaatattcaatcaatgatttgaacgacaacattgtagatccaaagg-catgaatatttccgtcattttaagtttatcat 6903049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 289
Target Start/End: Original strand, 7546595 - 7546630
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttc 289  Q
    ||||||||||||| ||||||||||||||||||||||    
T  7546595 tgttgttcgtcgtcttgtgcggcgttgtttgatttc 7546630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 20465100 - 20465045
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    ||||||||||||| |||||||| |||| | ||||||||||||| |||| |||||||    
T  20465100 ttgtgatttcatcgtctaagtgaggtgttgtgttgttcgtcgtcttgtacggcgtt 20465045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 29239300 - 29239363
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttc 289  Q
    ||||||||||| ||| |||| || | | ||||||||||||| |||||||||| |||||||||||    
T  29239300 gtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttc 29239363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 43488720 - 43488665
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    |||||||||| || ||||||||||| | | ||||||||||||| ||||||||||||    
T  43488720 ttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtt 43488665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 289
Target Start/End: Original strand, 51487091 - 51487126
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttc 289  Q
    ||||||||||||| ||||||||||||||||||||||    
T  51487091 tgttgttcgtcgtcttgtgcggcgttgtttgatttc 51487126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 296
Target Start/End: Complemental strand, 27706333 - 27706291
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 296  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||    
T  27706333 tgttgttcgtcgtcttgtgcggcgttgtttaatttcgcatctt 27706291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 296
Target Start/End: Original strand, 42460731 - 42460773
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 296  Q
    |||||||| |||| |||||||||||||||||||||| ||||||    
T  42460731 tgttgttcatcgtcttgtgcggcgttgtttgatttcacatctt 42460773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 14585618 - 14585667
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||| | ||||||| ||||||||||||||||||  ||||||||||    
T  14585618 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagatc 14585667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 31793996 - 31794033
Alignment:
Q  167 ttttctctctaattcaatctaaataagtgattttcaca 204  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  31793996 ttttttctctatttcaatctaaataagtgattttcaca 31794033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 47980905 - 47980852
Alignment:
Q  87 tctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttt 140  Q
    |||||||||| |||| |||| ||||||||||  |||||||||||||||| ||||    
T  47980905 tctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaattttt 47980852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 47990192 - 47990139
Alignment:
Q  87 tctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttt 140  Q
    |||||||||| |||| |||| ||||||||||  |||||||||||||||| ||||    
T  47990192 tctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaattttt 47990139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 47999479 - 47999426
Alignment:
Q  87 tctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttt 140  Q
    |||||||||| |||| |||| ||||||||||  |||||||||||||||| ||||    
T  47999479 tctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaattttt 47999426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 48008766 - 48008713
Alignment:
Q  87 tctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttt 140  Q
    |||||||||| |||| |||| ||||||||||  |||||||||||||||| ||||    
T  48008766 tctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaattttt 48008713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 427
Target Start/End: Original strand, 54149082 - 54149161
Alignment:
Q  346 gatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||| |||||||||||||||||||||| | ||||  |||| |||| ||||  |||||||||||| | |||||||||||||    
T  54149082 gatttgggcgtcaacgttgcagatccggaag-catggctatttcggtgacttggattttatcatat-tatttgtaggcatta 54149161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 3457107 - 3457143
Alignment:
Q  293 tcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||||||||||||||||||  |||||||||    
T  3457107 tcttagtacggtgtttatttgattcaagttgaaagat 3457143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 8914792 - 8914828
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    |||||||||| |||||| |||||||||||||||||||    
T  8914792 attcaatcaatgatttgggcgtcaacgttgcagatcc 8914828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 25849655 - 25849711
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttt 140  Q
    |||||||||||||||||| |||  |||| ||||| ||||||||||| ||||| ||||    
T  25849655 ctctctaggttttttcttccagcttcttaattgaggggtggttttgagtcaattttt 25849711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 36624668 - 36624620
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  36624668 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 36624620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 42719436 - 42719472
Alignment:
Q  166 tttttctctctaattcaatctaaataagtgattttca 202  Q
    |||||||||||| |||||| |||||||||||||||||    
T  42719436 tttttctctctatttcaatttaaataagtgattttca 42719472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 49628068 - 49628020
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  49628068 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 49628020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 51303651 - 51303615
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    |||||||||| |||||| |||||||||||||||||||    
T  51303651 attcaatcaatgatttgggcgtcaacgttgcagatcc 51303615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 54706688 - 54706640
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  54706688 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 54706640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 76)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 27267119 - 27266757
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||| ||||||||||||| |||| | || ||||||  |||||||||||||||||||| | || | | ||||| ||||| |||||||    
T  27267119 aagtcggccctagttttctctctctaggttttctcttcccgtttcttcaccgaagggtggttttgggtcaattcttgacctgaaatcacccc-tcttcat 27267021  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgt 263  Q
     |||||||||||| |||||||||||||||||||||||||| | || ||||        ||| ||||||||||||||||||||||||||||||||||||||    
T  27267020 atttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 27266921  T
Q  264 cgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgtt 363  Q
    ||| |||||||||  ||||||||||| | |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27266920 cgtcttgtgcggcactgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgaccgtcaacgtt 27266821  T
Q  364 gcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27266820 gcagatccggaggtcatggatattccggtcactttaattttatcatatatttttgtaggcatta 27266757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 154 - 427
Target Start/End: Complemental strand, 2058009 - 2057736
Alignment:
Q  154 cccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtt 253  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||| | || ||||       | || |||||||||||||||||||||||||||    
T  2058009 cccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtttttttctttatgatttcatcatctaagtgtggtggtt 2057910  T
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    ||||||||||||| ||| |||||||||||||||||| | |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2057909 tgttgttcgtcgtcttgcgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgag 2057810  T
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  2057809 cgtcaacgttgcagatccagatgccatggatattccggtcactataattttatcatatatttttgtaggcatta 2057736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 65 - 427
Target Start/End: Original strand, 34881531 - 34881898
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||| ||||| ||||||| ||||||||| ||| |||||| |||||||| |||||||| | || | | ||||| ||| | |||||||    
T  34881531 aagtcggccctagttttctctctccaggttttctcttacagtttctccattgaggggtggttctgggtcaattcttgacctgaaatcacctc-tcttcat 34881629  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn--------ccttgtgatttcatcatctaagtgtggtggtttgt 256  Q
    ||||| ||||||| |||||||||||||||||||||||||| | || |||                | |||||||||||||||||||||||||||||||||    
T  34881630 ctttt-ctctctatttcaatctaaataagtgattttcacatagatctagtttttttcttttttttctttgtgatttcatcatctaagtgtggtggtttgt 34881728  T
Q  257 tgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgt 356  Q
    |||||||||| |||||||||||||||||||||| | |||| || ||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  34881729 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgggcgt 34881828  T
Q  357 caacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  34881829 caacgttgcagatccggaggccatggatattcc-gtcactttaattatatcatatatttttgtaggcatta 34881898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 86 - 427
Target Start/End: Complemental strand, 18677704 - 18677363
Alignment:
Q  86 ctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatc 185  Q
    ||||||||||| | |||| || |||||||||| ||||||||||||||||| | || ||| ||||| | ||| |||||||||||||||||||| || ||||    
T  18677704 ctctaggttttcttttaccgtttcttcattgaggggtggttttgggtcaattattgatctgaaatcatccc-tcttcatctttttctctctattttaatc 18677606  T
Q  186 taaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttg 284  Q
    ||||||||||||||||||| | || ||||        ||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  18677605 taaataagtgattttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgggacgttgtttg 18677506  T
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaat 384  Q
    ||||  | |||| |||||||||| ||||||||||||||||||||||||||||| ||||||| | ||  |||||||| |||||||||||||| ||||| ||    
T  18677505 attttccgtcttcgtacggtgttcatttgattcatattgaaagatcgattatttaatcaaataatttggcgtcaacattgcagatccggagaccatggat 18677406  T
Q  385 attccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  18677405 attccggtcactttaattttatcatatatttttgtaagcatta 18677363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 19281203 - 19280843
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||| ||||| ||||||||||||| || | | || |||||||||  |||||||||||||| || |||| | ||||||| ||||  |||||||    
T  19281203 aagtcggccctaattttctctctctaggttttctcatcccgtttcttcattggggggtggttttgggtaaatttttgaccggaaatcaccca-tcttcat 19281105  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 264  Q
    ||||||||||||| |||||||||||||||||| ||||||| | || ||||       | |||||||||||||||||||||||||||||||||||||||||    
T  19281104 ctttttctctctatttcaatctaaataagtgactttcacacatatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 19281006  T
Q  265 gtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttg 364  Q
    || |||||| |||||||||| |||  ||||||  | | ||||| |||| |||| |||||||||||||||||||||||||||||||||  |||||||||||    
T  19281005 gtcttgtgcagcgttgtttgcttttccatcttcttgcagtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttg 19280906  T
Q  365 cagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| ||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  19280905 cagatccggaggctatggatattccggtgactttaatattatcatatatttttgtaggcatta 19280843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 7246783 - 7247140
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||| ||||| ||||||||||||| |||| | || |||||||||  ||||||||||||||||| | || | | ||||  ||||| |||||||||||    
T  7246783 cggccctaattttctctctctaggttttctcttcccgtttcttcattggggggtggttttgggtcaattcttaacctgaaaccacccc-tcttcatcttt 7246881  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    ||||||||| |||||||||||||||||| ||||||| | || ||||       | ||||||||||||||||||||||||||| ||||||||||||||| |    
T  7246882 ttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtct 7246981  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||||||||||| |||  ||||   ||||  | ||||||| |||| |||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  7246982 tgtgcggcgttattttttttcctgtcttcttgcggtgttcattttattcctattgatagatcgattatacaatcaaagatttgaacgtcaacgttgcaga 7247081  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  7247082 tccggaggccatggatattccggtgactttaattttatcatatatttttgtaggcatta 7247140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 84 - 427
Target Start/End: Complemental strand, 19260050 - 19259710
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    ||||||||||||| |||||| || ||||| |||| ||||||||||||||||| | || | | ||||| |||||   |    ||||||||||||| |||||    
T  19260050 ctctctaggttttctcttacggtttcttcgttgaggggtggttttgggtcaattcttgacctgaaatcaccccaatt----ctttttctctctatttcaa 19259955  T
Q  184 tctaaataagtgatttt-cacaaaaatataggnnnnnnncct-tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgt 281  Q
    ||||||||||||||||| |||| | || || |        || |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  19259954 tctaaataagtgatttttcacatagatctaagttttttttctctgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgt 19259855  T
Q  282 ttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatg 381  Q
    |||||| | | |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  19259854 ttgattcc-cgtcttcgtgcggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccaaaggccatg 19259756  T
Q  382 aatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  19259755 gatattccggtcactttaattttatcatatatttttgtaggcatta 19259710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 7241607 - 7241965
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||| ||||| ||||||||||||| |||| | || |||||||||  ||||||||||||||||| | || | | ||||  ||||| |||||||||||    
T  7241607 cggccctaattttctctctctaggttttctcttcccgtttcttcattggggggtggttttgggtcaattcttaacctgaaaccacccc-tcttcatcttt 7241705  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    ||||||||| |||||||||||||||||| ||||||| | || ||||       | ||||||||||||||||||| ||||||| ||||||||||||||| |    
T  7241706 ttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaattgtggtgatttgttgttcgtcgtct 7241805  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||||||||||| |||  ||||   ||||  | ||||||| |||| |||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  7241806 tgtgcggcgttattttctttcctgtcttcttgcggtgttcattttattcctattgatagatcgattatacaatcaaagatttgaacgtcaacgttgcaga 7241905  T
Q  369 tccggaggccatgaatattccgg-tcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||    
T  7241906 tccggaggccatggatattccggttgactttaattttatcatatatttttgtaggcatta 7241965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 74 - 427
Target Start/End: Complemental strand, 7150585 - 7150233
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||| ||||||||||||| |||| | || ||||||||   || ||||||||| | || |||| | | ||||| ||||| ||||||||||||||||    
T  7150585 ctagttttctctctctaggttttctcttcccgtttcttcattcggggatggttttggattaatttttgacctgaaatcacccc-tcttcatctttttctc 7150487  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgc 273  Q
    |||| |||||||||||||||||| ||||||| | || || |       | ||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  7150486 tctatttcaatctaaataagtgactttcacatagatctaagtttttttctttgtgctttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 7150387  T
Q  274 ggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgg 373  Q
    ||||||||||| |||| | ||||  | ||||||| |||| ||||  ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  7150386 ggcgttgtttgctttcccgtcttcttgcggtgttcattttattcccattgaaagatcaattattcaatcaaagatttggacgtcaacgttgcagatccgg 7150287  T
Q  374 aggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    || ||||| ||||| |||| |||||||||||||||||||||||||||| |||||    
T  7150286 agaccatggatatttcggtgactttaattttatcatatatttttgtagtcatta 7150233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 74 - 427
Target Start/End: Complemental strand, 21060531 - 21060181
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||| ||||||||||||| ||||  ||  | ||||| ||  |||||||||||||||| | || ||| ||||| ||| | ||||||||||||||||    
T  21060531 ctagttttctctctctaggttttctcttctagatttttcatcgagtggtggttttgggtcaattcttgatctgaaatcaccac-tcttcatctttttctc 21060433  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgc 273  Q
    | || |||||||||||||||||||||||||| | || ||||       | | ||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  21060432 tatatttcaatctaaataagtgattttcacatagatgtaggtttttt-cttcgtgatgtcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 21060334  T
Q  274 ggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgg 373  Q
    |||  | ||||||||| | ||||  | | ||||| || | |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  21060333 ggcactttttgatttcccgtcttcttgcagtgttcatctaattcattttgaa-gatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgg 21060235  T
Q  374 aggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21060234 aggccatggatattccggtcactttaattttatcatatatttttgtaggcatta 21060181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 224 - 427
Target Start/End: Complemental strand, 41184541 - 41184338
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| ||  ||||||  ||||||||||||||    
T  41184541 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcgtttgattcatattg 41184442  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 423  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  |||    
T  41184441 aaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccagtcactttaattttatcatatatttttgccggc 41184342  T
Q  424 atta 427  Q
    ||||    
T  41184341 atta 41184338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 74 - 418
Target Start/End: Original strand, 42579707 - 42580060
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttttt--- 170  Q
    ||||||||| ||||||||||||| ||||||||| ||| |||||| ||||||||||||||||| | || |   ||||| ||||| | ||||| |||||       
T  42579707 ctagttttctctctctaggttttctcttacagtttctccattgaggggtggttttgggtcaattattgacatgaaatcacccctt-ttcatttttttttt 42579805  T
Q  171 ctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn-------ccttgtgatttcatcatctaagtgtggtggtttgttgttcgt 263  Q
    || |||| |||||||||||||||||||||||||| | || ||||              | ||||||||||||||||||||||||||| ||||||||||||    
T  42579806 ctttctatttcaatctaaataagtgattttcacatagatttaggtttttttgttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgt 42579905  T
Q  264 cgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgtt 363  Q
    ||| ||||||| |||||||||||||    |||| || | ||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  42579906 cgtcttgtgcgacgttgtttgattttctgtcttcgtgcagtgttcattttattcatatttaaagatcgattattcaatcaaagatttgggcgtcaacgtt 42580005  T
Q  364 gcagatccggaggccatgaatattccggtcactttaattttatcatatatttttg 418  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42580006 gcagatccggaggccatgaatattccggtcactttaattttatcatatatttttg 42580060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 158 - 427
Target Start/End: Complemental strand, 43261984 - 43261717
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| | || ||||       | ||||||||| ||||||||||||||||||||||||    
T  43261984 tcttcatctttttatctctatttcaatctaaataagtgattttcacatagatctaggttttc--ctttgtgattttatcatctaagtgtggtggtttgtt 43261887  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    ||||||||| || ||||| ||||||||||||  | ||||  | |||||||||||||||||||||||||| |||||||||||||||||||||||| | |||    
T  43261886 gttcgtcgtcttatgcggtgttgtttgattttccgtcttcttgcggtgtttatttgattcatattgaaaaatcgattattcaatcaaagatttgggagtc 43261787  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    || |||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  43261786 aaagttgcagatccgaaggtcatggatattccggtcactttaatgttatcatatatttttgtaggcatta 43261717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 167 - 427
Target Start/End: Original strand, 30298130 - 30298388
Alignment:
Q  167 ttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 266  Q
    |||||||| || |||||||||||||||||||||||||| | || ||||       | || ||||||||||||||||||||||||||||||||||||||||    
T  30298130 ttttctctatatttcaatctaaataagtgattttcacatagatctaggtttttt-ctttatgatttcatcatctaagtgtggtggtttgttgttcgtcgt 30298228  T
Q  267 attgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgca 366  Q
     |||||||||| ||||||||||  | ||||  | ||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  30298229 cttgtgcggcgctgtttgattttccgtcttcttgcggtgtttatttgattcatattgaa-gattgattattcaatcaaagatttgggcgtcaacgttgca 30298327  T
Q  367 gatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  30298328 gatctggaggccatggatattccggccactttaattttatcatatatttttgtaggcatta 30298388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 74 - 427
Target Start/End: Original strand, 26578079 - 26578433
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||| ||||| || |||| ||||||| | |||| ||||| || ||||||| |||||| | || | | ||||| || |  ||||||||||||||||    
T  26578079 ctagttttctctctccagattttctcttacaatttctttattgatggatggtttttggtcaattcttgacctgaaatcactca-tcttcatctttttctc 26578177  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn--ccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgt 271  Q
    | || |||||||||||||||||||||||||| | || ||||         | |||| |||||||||||||| ||| ||| ||||||||||||||| ||||    
T  26578178 tttatttcaatctaaataagtgattttcacatagatctaggtttttttttctttgtaatttcatcatctaaatgtagtgatttgttgttcgtcgtcttgt 26578277  T
Q  272 gcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    ||| |||||||||||||| | |||| || | ||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||    
T  26578278 gcgacgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaatgttgcagatcc 26578377  T
Q  372 ggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  26578378 ggaagcaatgaatatttcggtcactttaatttcatcatatatttttgtaggcatta 26578433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 156 - 427
Target Start/End: Original strand, 16981201 - 16981473
Alignment:
Q  156 cctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttg 255  Q
    ||||||||| |||||||||||| ||||||||||||||||||||| |||| | || ||||       | |||||||||||||||||||||| |||||||||    
T  16981201 cctcttcatatttttctctctatttcaatctaaataagtgatttacacatatatctaggtttttt-ctttgtgatttcatcatctaagtgcggtggtttg 16981299  T
Q  256 ttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcg 355  Q
    ||||||||||| ||||||||| |||||| ||||  | ||||  | |||||||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  16981300 ttgttcgtcgtcttgtgcggcattgtttaattttccgtcttcttgcggtgttcctttgattcatattgaaagatcgattattcaatcaaagatttgggcg 16981399  T
Q  356 tcaacgttgcagatccggaggccatgaatattccggtcactttaattttatc--atatatttttgtaggcatta 427  Q
    ||| ||||||||||||||||| |||| |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  16981400 tcatcgttgcagatccggaggtcatggatattccggtgactttaattttatcatatatatttttgtaggcatta 16981473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 65 - 369
Target Start/End: Original strand, 30371545 - 30371849
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||| || |||||||||| ||||||| | |||||||||| |||||||||||||||||  ||| | | ||||| ||||| |||||||    
T  30371545 aagtcggccctagttttctctatctaggttttctcttacaatttcttcattgaggggtggttttgggtcaatatttgacctgaaatcacccc-tcttcat 30371643  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgt 263  Q
    |||||||||| || |||||||||||||||||||||||||| | || ||||        ||| || |||||||||||||||||||||| ||||||||||||    
T  30371644 ctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgt 30371743  T
Q  264 cgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgtt 363  Q
    | | |||||||||||||||||||||| |||||| || ||||||| |||| ||||||||||||||||||||| ||||||||||||||||  ||||||| ||    
T  30371744 catcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttaattcatattgaaagatcgattgttcaatcaaagatttggacgtcaacatt 30371843  T
Q  364 gcagat 369  Q
    ||||||    
T  30371844 gcagat 30371849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 112 - 425
Target Start/End: Complemental strand, 35475548 - 35475238
Alignment:
Q  112 cattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatat 211  Q
    |||||| ||||| |||||||| || | || ||| ||||| ||| | |||||||||| || ||| || |||||||||||||||||||||||||| | || |    
T  35475548 cattgaggggtgattttgggttaattcttgatctgaaatcacctc-tcttcatcttgttatctatatttcaatctaaataagtgattttcacatagatct 35475450  T
Q  212 aggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatt 311  Q
    ||        | ||||||||||||||| || |||||||||||||||||||||||| || ||||||| ||||||||||||| ||||  | ||||||| |||    
T  35475449 ag-attttttctttgtgatttcatcatttacgtgtggtggtttgttgttcgtcgttttatgcggcgctgtttgatttctcgtcttcttgcggtgttcatt 35475351  T
Q  312 tgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | || |||||| ||||||| |||||||||||||||||||||    
T  35475350 tgattcatatt-aaagatcgattattcaatcaaagatttgggcgtcaacgttgcagattcagaagccatggatattccagtcactttaattttatcatat 35475252  T
Q  412 atttttgtaggcat 425  Q
    ||||||||||||||    
T  35475251 atttttgtaggcat 35475238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 158 - 427
Target Start/End: Original strand, 781302 - 781569
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    ||||||||||||||||| || |||||||||||||||||||||||| | | || ||||       | ||||||||||||||||||||| ||||||||||||    
T  781302 tcttcatctttttctctatatttcaatctaaataagtgattttcagatagatctagggttttt-ctttgtgatttcatcatctaagtatggtggtttgtt 781400  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    |||||||||  ||||||||  ||||||||||| | ||||  | ||||||| || |||||||| ||||| |||| |||||||||||||| |||||||||||    
T  781401 gttcgtcgtcatgtgcggcactgtttgatttcccgtcttcttgcggtgttcatctgattcattttgaa-gatcaattattcaatcaaaaatttgagcgtc 781499  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  781500 aacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatttttgtagacatta 781569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 224 - 427
Target Start/End: Complemental strand, 3271503 - 3271300
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||  | |||| || ||||||| |||||||||||||||    
T  3271503 ttgtgatttcatcatctaagtgtggtggtttgttattcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattg 3271404  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 423  Q
    ||||||| |||||| |||||||||||||  ||||||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||||||| ||    
T  3271403 aaagatccattatttaatcaaagatttggacgtcaacgttgcagatcaggagaccatggatattccgatcactttaattttatcatatatttttgtaagc 3271304  T
Q  424 atta 427  Q
    ||||    
T  3271303 atta 3271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 86 - 427
Target Start/End: Original strand, 28235427 - 28235766
Alignment:
Q  86 ctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatc 185  Q
    |||||| |||| |||| |||| |||| ||||| |||||||||||||||||   || | | ||||| ||||| ||||||||||||||| |||| ||| |||    
T  28235427 ctctagattttctcttccagtttctttattgaggggtggttttgggtcaatcattgacctgaaatcacccc-tcttcatctttttctttctatttcgatc 28235525  T
Q  186 taaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttga 285  Q
    ||||||||||||||||||| | || |||        | |||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||||||||    
T  28235526 taaataagtgattttcacatagatctag-attttttctttgtgatttcatcatctaagtgtgatggtttgttgtctgtcgtcttgtgcggcgttgtttga 28235624  T
Q  286 tttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaata 385  Q
    |||  ||||||  | ||||||| |||| |||| |||||||||||| | ||||||||||||||||   ||||||| | || ||||| |||||||||| |||    
T  28235625 ttttccatcttcttgcggtgttcattttattcttattgaaagatcaagtattcaatcaaagattcaggcgtcaaagatgtagatctggaggccatggata 28235724  T
Q  386 ttccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    || || ||||||||||||||||||||||||||||||||||||    
T  28235725 tttcgatcactttaattttatcatatatttttgtaggcatta 28235766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 224 - 427
Target Start/End: Original strand, 10649625 - 10649825
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    |||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||||||||  | |||| || ||||||| ||||||||| ||  |    
T  10649625 ttgtgatttcatcatctaagtgtgg---tttgttgttcgtcgtcttgtgcggcgttgtttgatttaccgtcttcgtgcggtgttcatttgattcttacag 10649721  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 423  Q
    ||| ||  |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  10649722 aaaaatttattattcaatcaaatatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatgtttttgtaggc 10649821  T
Q  424 atta 427  Q
    ||||    
T  10649822 atta 10649825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 160 - 427
Target Start/End: Original strand, 43148645 - 43148908
Alignment:
Q  160 ttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgt 259  Q
    |||||| ||||||||||| ||| |||||||||||||| ||||||| | || |||        | ||||||||||||||||||||||||||||||||||||    
T  43148645 ttcatccttttctctctatttcgatctaaataagtgactttcacatatatttagatttttttctttgtgatttcatcatctaagtgtggtggtttgttgt 43148744  T
Q  260 tcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaa 359  Q
    ||||||| |||||||| |||||||| |||| | ||||  | || |||| |||| |||| ||||||||||||||||||    |||||||||||  | ||||    
T  43148745 tcgtcgtcttgtgcggtgttgtttgctttcccgtcttcttgcgttgttcattttattcctattgaaagatcgattat----tcaaagatttggacctcaa 43148840  T
Q  360 cgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  43148841 cgttgcagatctggaggccatggatattccggtgactttaattttatcatatatttttgtaggcatta 43148908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 69 - 427
Target Start/End: Complemental strand, 7887192 - 7886837
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| || ||||  |||| |||| |||| ||||||| || ||||||||||||||| | | || | | ||||| | ||| ||||| |||||    
T  7887192 cggccctagttttctctttctaacttttctcttccagtttcttcatcgaggggtggttttgggtccattcttgacctgaaatcatccc-tcttcgtcttt 7887094  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    | ||||||| || ||||||||||||||||||||||| |||| || |       | || |||||||||||||||||||||||||||||||||||||||| |    
T  7887093 tcctctctattttaatctaaataagtgattttcacataaatctatgtttttt-ctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 7886995  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||| |  | |||||||||||  | ||||  | |||||||| | ||||||||||| |||||||||||||||||||||||||||  || | |||||||||||    
T  7886994 tgtacaacattgtttgattttccgtcttcttgcggtgtttgtctgattcatattaaaagatcgattattcaatcaaagattttggcattaacgttgcaga 7886895  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||| |||| |||||||||||||| || ||||||||||| |||||||||||||||    
T  7886894 tccggaggtcatggatattccggtcactatagttttatcatat-tttttgtaggcatta 7886837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 158 - 427
Target Start/End: Original strand, 42886392 - 42886659
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    |||||||| ||||||||||| ||||||| ||||||||| |||||||| | || ||||       | | ||||||||||||||| ||||||||||| ||||    
T  42886392 tcttcatccttttctctctatttcaatcaaaataagtgcttttcacatagatttaggttttt--cttcgtgatttcatcatctgagtgtggtggtgtgtt 42886489  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    ||||||||| |||||||||||||||||||||| |  |||  | | ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  42886490 gttcgtcgtcttgtgcggcgttgtttgatttcccgccttgttgcagtgttcatttgattcatattaaaagatcgattattcaatcaaagatttga-cgtc 42886588  T
Q  358 aacgttgcagatccg--gaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||  || | ||||  ||||||||||| ||||||||||| ||||||||||||||||||||    
T  42886589 aacgttgcagatccgaagacggcatg-gtattccggtcaatttaattttataatatatttttgtaggcatta 42886659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 224 - 427
Target Start/End: Original strand, 27751904 - 27752106
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    ||||||||||||||||||||||||||||||||||||||||||  || || |||| | ||||||||| | ||||  | ||||||| |||||||||||||||    
T  27751904 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgccttttggggcgctatttgatttcccgtcttcttgcggtgttcatttgattcatattg 27752003  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 423  Q
    ||  || |||||||| ||||||||| || | |||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  27752004 aat-attgattattcgatcaaagatatgggtgtcaacgttgcagatctggaggccatagatattccggtcactttaattttatcatatatttttgtaggc 27752102  T
Q  424 atta 427  Q
    ||||    
T  27752103 atta 27752106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 259 - 427
Target Start/End: Original strand, 4954005 - 4954173
Alignment:
Q  259 ttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtca 358  Q
    |||||||| ||||||||||||||||  |||| | ||||  | ||||||| |||| |||| |||||||||||||||||||||||||||||||||  |||||    
T  4954005 ttcgtcgtcttgtgcggcgttgttttctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtca 4954104  T
Q  359 acgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4954105 acgttgcagattcggaggccatgaatattccggtgactttaattttatcatatatttttgtaggcatta 4954173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 65 - 380
Target Start/End: Complemental strand, 36344748 - 36344436
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||| ||||  |||||||| |||| |||| || | |||||||||| ||||||||||| ||| | | || | |  |||| ||||| |||||||    
T  36344748 aagtcggccctaattttttctctctagattttctcttccaatttcttcattgaggggtggttttgagtcgattcttgacctaaaatcacccc-tcttcat 36344650  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 264  Q
    |||||||||| || |||||||||||||||| |||||||||   || || |       | ||||||||| |||||||||||||||||||||||||||||||    
T  36344649 ctttttctctatatttcaatctaaataagttattttcacatggatctaagtttttt-ctttgtgattt-atcatctaagtgtggtggtttgttgttcgtc 36344552  T
Q  265 gtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttg 364  Q
    || |||||||||||||||||||||  | | ||  | ||||||| |||||||||||||||||||||  ||| |||||||||||| ||| |||| ||| |||    
T  36344551 gtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttgattcatattgaaagattaatttttcaatcaaagagttgggcgtgaacattg 36344452  T
Q  365 cagatccggaggccat 380  Q
    ||||||||||||||||    
T  36344451 cagatccggaggccat 36344436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 155 - 427
Target Start/End: Original strand, 15570819 - 15571088
Alignment:
Q  155 ccctcttcatctttttctctctaattcaatctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtt 253  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||| |||| | || ||||       | |||||||||| ||| |  |||||||||||     
T  15570819 ccctcttcatctttttctctataattcaatctaaatatttgatttttcacatagatgtaggtttttt-ctttgtgatttcgtcacccgagtgtggtggtg 15570917  T
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    ||||||||||||| || ||||| ||||||||||| | ||| ||  |  |||||| ||||||||||||||||| |||| |||||||||||||| | |||      
T  15570918 tgttgttcgtcgtcttatgcggtgttgtttgattcc-catattgttgtggtgttcatttgattcatattgaa-gatctattattcaatcaaataattgga 15571015  T
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||| ||||||||| |||||||| | |||  |||||| |||||||||||||||||||||||||||||||||||||    
T  15571016 cgttaacgttgcacatccggagtc-atgtgtattccagtcactttaattttatcatatatttttgtaggcatta 15571088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 164 - 427
Target Start/End: Complemental strand, 20257855 - 20257594
Alignment:
Q  164 tctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgt 263  Q
    |||||||||||||| |||||||||||||||||||||||||| | || ||||       | |  | ||||   ||||| |||||||  |  ||||||||||    
T  20257855 tctttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttttcttcattattttgccatctgagtgtggcagcgtgttgttcgt 20257756  T
Q  264 cgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgtt 363  Q
    ||| ||||||| | || || |||||  | ||||  | ||||||| |||||||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  20257755 cgtcttgtgcgacattatt-gattttccgtcttgttgcggtgttcatttgattcatattgaagtatcgattattcaatcaaagatttgcgcgtcaacgtt 20257657  T
Q  364 gcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    | |||||||||   | ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  20257656 gtagatccgga-aacgtgggtattccggtcactttaattttatcatatatttttgtaggcatta 20257594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 235 - 427
Target Start/End: Complemental strand, 7613148 - 7612956
Alignment:
Q  235 tcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgatt 334  Q
    |||||| ||||||||||| ||||||||||||| ||||||   ||||||||||||||| ||||  | ||||||| ||||||||||||||||||||||||||    
T  7613148 tcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatattgaaagatcgatt 7613049  T
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaata-ttccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||  |||||| | | |||||| ||||||||||| ||| ||||| || ||  || ||  |||||||||||||||||||||||||||||||    
T  7613048 attcaatttaagattggggtgtcaacattgcagatccgaagg-catgagtatttttggccaagttaattttatcatatatttttgtaggcatta 7612956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 309 - 427
Target Start/End: Original strand, 11768065 - 11768180
Alignment:
Q  309 atttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatca 408  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||  ||||  |||||||||||||||||||    
T  11768065 atttaattcatattgaaagatcgattattcaatcaaagatttgagcgtcaatgttgcaaatctggagg-catg--tattatggtcactttaattttatca 11768161  T
Q  409 tatatttttgtaggcatta 427  Q
    ||||||||||||| |||||    
T  11768162 tatatttttgtagccatta 11768180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 158 - 366
Target Start/End: Complemental strand, 27576516 - 27576309
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    |||||||| ||||||||||| |||||| |||||||||||| |||||| | || |||        | |||||||||| |||| | ||||||||||| ||||    
T  27576516 tcttcatccttttctctctatttcaatgtaaataagtgatattcacatagatctag-attttttctttgtgatttcgtcatatgagtgtggtggtatgtt 27576418  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    |||| ||   ||||||| |||||||||||||| | ||||  | ||||||| ||||  || |||||||||||||||||||||||||||||||||| || ||    
T  27576417 gttcttctacttgtgcgacgttgtttgatttcccgtcttgttgcggtgttcatttattttatattgaaagatcgattattcaatcaaagatttgggcatc 27576318  T
Q  358 aacgttgca 366  Q
    |||||||||    
T  27576317 aacgttgca 27576309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 427
Target Start/End: Complemental strand, 22978947 - 22978822
Alignment:
Q  301 cggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaa 400  Q
    ||||||| ||||||||||||||||||||   |||||| ||||||||||||| |||||||| |||||||| | |||| ||||  |||| |||||||||| |    
T  22978947 cggtgttcatttgattcatattgaaagaaaaattattaaatcaaagatttgggcgtcaacattgcagattctgagg-catgggtatttcggtcactttca 22978849  T
Q  401 ttttatcatatatttttgtaggcatta 427  Q
    |||||| | |||||||||||| |||||    
T  22978848 ttttataaaatatttttgtagccatta 22978822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 353 - 427
Target Start/End: Original strand, 30298951 - 30299025
Alignment:
Q  353 gcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||| ||||||||| ||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  30298951 gcgtcaacattgcagatctggatgccatggatattctggtcactttaattttatcatatatttttgtaggcatta 30299025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 254 - 411
Target Start/End: Complemental strand, 19100708 - 19100552
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    |||| ||||| || ||||||| ||||||| | |||||  |||| |||||||||| ||||||||| ||||||||||  | |||||||||||| |||||||     
T  19100708 tgttattcgttgtcttgtgcgacgttgttcggtttcttgtcttggtacggtgttcatttgattcctattgaaagagtggttattcaatcaatgatttgaa 19100609  T
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    | |||||||| ||||| |  | | ||||| |||||| |||||||||||||||||||||    
T  19100608 catcaacgttccagat-cttaagacatgagtattccagtcactttaattttatcatat 19100552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 204
Target Start/End: Original strand, 10649316 - 10649412
Alignment:
Q  107 gtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcaca 204  Q
    ||||||||||| ||||| ||||||||||| | || | | ||||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||    
T  10649316 gtcttcattgaggggtgattttgggtcaattcttgacctgaaatcacccc-tcttcatctttttctctttatttcaatctaaataagtgattttcaca 10649412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 410
Target Start/End: Original strand, 6445951 - 6446036
Alignment:
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcata 410  Q
    ||||||||||||||||||||||| |||   |||||||||||||| | || || | ||| ||||||||||||||||||||||||||||    
T  6445951 aaagatcgattattcaatcaaaggtttagacgtcaacgttgcagtttcgaagac-atggatattccggtcactttaattttatcata 6446036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 406
Target Start/End: Original strand, 42432962 - 42433058
Alignment:
Q  309 atttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtca-ctttaattttat 406  Q
    ||||||||| ||||||| |||| ||||||||||||| |||  || |||||||||||||||||| || |||||||||||| |||||| ||||||||||||    
T  42432962 atttgattcttattgaa-gatcaattattcaatcaatgatccgaacgtcaacgttgcagatcc-gaagccatgaatatttcggtcatctttaattttat 42433058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 17687361 - 17687409
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  17687361 tttgatttcccatcttagtacggtgtttatttgattcagattgaaagat 17687409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 28097169 - 28097279
Alignment:
Q  262 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 361  Q
    ||||| |||||||| ||||||||||||||| ||||  || |||||| ||||| ||||  |||||||||||    ||||||||| ||||||| |||||||     
T  28097169 gtcgttttgtgcggtgttgtttgatttctcgtcttcctatggtgttcatttggttcacgttgaaagatcg---gttcaatcaatgatttgaacgtcaaca 28097265  T
Q  362 ttgcagatccggag 375  Q
    | ||||||||||||    
T  28097266 tagcagatccggag 28097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 3271663 - 3271529
Alignment:
Q  67 gtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatct 166  Q
    |||||| ||| ||||| |||||||  |||||||||| ||| |||||||||| ||||| |||| |||||| | || |   ||||| || || |||||||||    
T  3271663 gtcggccctaattttctctctctaaattttttcttatagtttcttcattga-gggtgattttaggtcaattcttgacatgaaatcactcc-tcttcatct 3271566  T
Q  167 ttttctctctaattcaatctaaataagtgattttcaca 204  Q
    ||| ||||||  ||||||||||||||||||||||||||    
T  3271565 ttt-ctctctgtttcaatctaaataagtgattttcaca 3271529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 367
Target Start/End: Complemental strand, 41214714 - 41214622
Alignment:
Q  277 gttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcga--ttattcaatcaaagatttgagcgtcaacgttgcag 367  Q
    ||||||||||||| | ||||| | | |||||| ||||||| |||||||||||||    ||| |||||||||||||||| ||||||||||||||    
T  41214714 gttgtttgatttcgcgtcttatttccgtgtttctttgatttatattgaaagatcagctttaatcaatcaaagatttgaacgtcaacgttgcag 41214622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 6012268 - 6012213
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    ||||||||||||| |||||||| |||| | ||||||||||||| ||||||||||||    
T  6012268 ttgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 6012213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 6216978 - 6217067
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    |||||||||| |||||| ||||||||||||||||| |||| | ||||  |||| |||| |||| ||||||||||||| | ||||||||||||    
T  6216978 attcaatcaatgatttgggcgtcaacgttgcagattcggaag-catgtgtatttcggtgacttaaattttatcatat-tatttgtaggcatt 6217067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 10332651 - 10332576
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||| ||||| ||||||||| |||||||||||| | ||||  | | |||||| ||||||||||||||||||||    
T  10332651 tgttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaaagat 10332576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 41418690 - 41418628
Alignment:
Q  356 tcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgt 419  Q
    ||||| ||| |||||||||| | ||| |||||||| ||||||||||||||||||||||||||||    
T  41418690 tcaacattgtagatccggagac-atggatattccgctcactttaattttatcatatatttttgt 41418628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 288
Target Start/End: Original strand, 11767720 - 11767851
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgt 256  Q
    ||||||||||||||||| || |||||||||||||||||||||| |||  | ||||| |       | | ||||| ||  ||||| ||||||||||| |||    
T  11767720 tcttcatctttttctctatatttcaatctaaataagtgatttttcacgtagatatatgtttttttcttcgtgatgtcgccatctgagtgtggtggtgtgt 11767819  T
Q  257 tgttcgtcgtattgtgcggcgttgtttgattt 288  Q
    |||||||||| |||| ||  ||||||||||||    
T  11767820 tgttcgtcgtcttgtacgaagttgtttgattt 11767851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 329
Target Start/End: Complemental strand, 17096208 - 17096158
Alignment:
Q  279 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| | ||||||||||||||||||||||||||  |||||||||    
T  17096208 tgtttgatttcccgtcttagtacggtgtttatttgattcaggttgaaagat 17096158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 374
Target Start/End: Original strand, 13468612 - 13468727
Alignment:
Q  256 ttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcg 355  Q
    |||||| |||| ||||| | ||||| |||||||||  ||||  | ||||||| ||||| ||| |||   ||||||| |||||||||||| |||| ||| |    
T  13468612 ttgttcatcgtcttgtgtgacgttgcttgatttctagtcttgtttcggtgttcatttggttcttat---aagatcggttattcaatcaatgattcgagtg 13468708  T
Q  356 tcaacgttgcagatccgga 374  Q
    |||||||||||||| ||||    
T  13468709 tcaacgttgcagattcgga 13468727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 14211208 - 14211248
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 294  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  14211208 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatc 14211248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 28541013 - 28540973
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 294  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  28541013 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatc 28540973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 14082503 - 14082448
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    ||||||||||||| ||||||||||| | | ||||||||||||| |||| |||||||    
T  14082503 ttgtgatttcatcgtctaagtgtggcgttgtgttgttcgtcgtcttgtacggcgtt 14082448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 35921004 - 35920965
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccgga 374  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  35921004 attcaatcaatgatttgaacgtcaacgttgcagatccgga 35920965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 407
Target Start/End: Original strand, 11192425 - 11192530
Alignment:
Q  301 cggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaa 400  Q
    |||||| | |||| |||||||||||||| |  ||||||||| || |||||| | |||||||||| |||||||||   ||||| |||| || |||||||||    
T  11192425 cggtgtctgtttggttcatattgaaagaccagttattcaataaatgatttgggtgtcaacgttgtagatccgga-aacatgagtatttcgatcactttaa 11192523  T
Q  401 ttttatc 407  Q
     ||||||    
T  11192524 atttatc 11192530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 14211110 - 14211160
Alignment:
Q  154 cccctcttcatctttttctctctaattcaatctaaataagtgattttcaca 204  Q
    ||||||| |||||||||| || |  ||||||||||||||||||||||||||    
T  14211110 cccctctgcatctttttccctttctttcaatctaaataagtgattttcaca 14211160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 389
Target Start/End: Complemental strand, 42432103 - 42432019
Alignment:
Q  303 gtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattcc 389  Q
    ||||| ||||||||| || | ||||||  |||||| |||||| ||| | | ||||||||||||||||||||| ||||||||||||||    
T  42432103 gtgttcatttgattcctact-aaagattaattatttaatcaatgatctaaacgtcaacgttgcagatccgga-gccatgaatattcc 42432019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 1582288 - 1582243
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcac 203  Q
    ||||||| |||||||||| | || ||||||||||||||||||||||    
T  1582288 tcttcatatttttctctccattttaatctaaataagtgattttcac 1582243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 1602527 - 1602572
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcac 203  Q
    ||||||| |||||||||| | || ||||||||||||||||||||||    
T  1602527 tcttcatatttttctctccattttaatctaaataagtgattttcac 1602572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 318
Target Start/End: Original strand, 23428408 - 23428445
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattca 318  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  23428408 tttgatttctcgtcttagtgcggtgtttatttgattca 23428445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 35676324 - 35676259
Alignment:
Q  75 tagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttt 140  Q
    |||||||| ||||||   |||| |||||| || ||||||||||||||||||||||| |||| ||||    
T  35676324 tagttttctctctctgaattttctcttactgtttcttcattgaagggtggttttggatcaattttt 35676259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 2979314 - 2979278
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    |||||||||| |||||| |||||||||||||||||||    
T  2979314 attcaatcaatgatttgggcgtcaacgttgcagatcc 2979278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 7771786 - 7771738
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||  ||||||||| ||||||||||||||||||  |||||||||    
T  7771786 tttgattttccatcttagtgcggtgtttatttgattcaagttgaaagat 7771738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 11734784 - 11734736
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| || ||||||||||||||| ||||||||||    
T  11734784 tttgatttcccgtcttagtgcgatgtttatttgattcagattgaaagat 11734736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 14535058 - 14535102
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||||| | |||||||||||||||||  ||||||||||    
T  14535058 atttctcatcttaatgcggtgtttatttgattcggattgaaagat 14535102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 15571566 - 15571641
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    |||||||||| |||||| | |||||||||||||||||||| | ||||| || | | || |||| |||||||||||||    
T  15571566 attcaatcaatgatttgggtgtcaacgttgcagatccggaag-catgagtagttcagtgacttaaattttatcatat 15571641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 17331484 - 17331532
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  17331484 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 17331532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 17732347 - 17732303
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||| ||||||||| ||||||||||||||||||  |||||||||    
T  17732347 atttcccatcttagtgcggtgtttatttgattcaagttgaaagat 17732303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 19103574 - 19103534
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 294  Q
    ||||||| ||||| |||||||||||||||||||||| ||||    
T  19103574 tgttgttagtcgtcttgtgcggcgttgtttgatttcacatc 19103534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 19983456 - 19983336
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    |||||||||| |||| | ||||||| | | ||||||||||||  ||||||||||||||| | ||| || ||||  |  |||||| ||||| ||||| |||    
T  19983456 ttgtgatttcgtcatatgagtgtggcgctgtgttgttcgtcgccttgtgcggcgttgttagttttttcgtcttgttgtggtgttcatttgcttcatgttg 19983357  T
Q  324 aaagatcgattattcaatcaa 344  Q
      |||| | ||||||||||||    
T  19983356 ggagattggttattcaatcaa 19983336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 20483342 - 20483390
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | |||||||||||||||||||||| |||  |||||||||    
T  20483342 tttgatttcccgtcttagtacggtgtttatttgactcaagttgaaagat 20483390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 24229914 - 24229866
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtg 272  Q
    |||||||||| ||||||||||| || | ||||||||||||||| |||||    
T  24229914 ttgtgatttcgtcatctaagtgcggcgttttgttgttcgtcgtcttgtg 24229866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 28540914 - 28540878
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    |||||||||| |||||| |||||||||||||||||||    
T  28540914 attcaatcaatgatttgggcgtcaacgttgcagatcc 28540878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 32347679 - 32347631
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | |||||||||||||||||||| |||||  |||||||||    
T  32347679 tttgatttcccgtcttagtacggtgtttatttaattcaagttgaaagat 32347631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 33164433 - 33164385
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  33164433 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 33164385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 42609300 - 42609348
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | |||||||| | |||||||||||||||| |||||||||    
T  42609300 tttgatttcacgtcttagtatgatgtttatttgattcatgttgaaagat 42609348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 99)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 65 - 427
Target Start/End: Original strand, 4643686 - 4644049
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccc-tcttca 163  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |||||||||| |||||||||| ||| || |||| | | ||||| |||||| ||||||    
T  4643686 aagtcggccctagttttctctttctaggttttctcttacagtctcttcattgaggggtggttttaggtgaatttttgacctgaaatcacccccctcttca 4643785  T
Q  164 tctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcg 262  Q
    |||||||||||||| ||||||||||||||||||||| |||| | || |||         ||| |||||||||||||||||||||||||||||||||||||    
T  4643786 tctttttctctctatttcaatctaaataagtgattt-cacatagatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 4643884  T
Q  263 tcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgt 362  Q
    |||| |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  4643885 tcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaaagt 4643984  T
Q  363 tgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  4643985 tgcagatccggaggtcatgaatattccggtcaatttaattttatcatatattattgtaggcatta 4644049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 25273709 - 25274074
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctt- 167  Q
    |||| ||||||||| |||||||| |||| ||||||||| ||| |||||| |||||||||||| |||| | || | | ||||| ||||| ||||||||||     
T  25273709 cggccctagttttctctctctagattttctcttacagtttctccattgaggggtggttttggatcaattcttgacctgaaatcacccc-tcttcatcttc 25273807  T
Q  168 ----tttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn---ccttgtgatttcatcatctaagtgtggtggtttgttgtt 260  Q
        |||||||||| |||||||||||||||||||||||||| | || ||||          | |||||||||||||||||||||||||||||||||||||    
T  25273808 atcttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 25273907  T
Q  261 cgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaac 360  Q
    |||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  25273908 cgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaaaatttgggcgtcaac 25274007  T
Q  361 gttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25274008 gttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggcatta 25274074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 84 - 427
Target Start/End: Complemental strand, 38706950 - 38706608
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    |||||||||||||||||||| || |||||||||| ||||||||||||||||| | || |||  |||| ||||  |||||||||||||||||||| |||||    
T  38706950 ctctctaggttttttcttactgtttcttcattgaggggtggttttgggtcaattcttgatctaaaatcaccct-tcttcatctttttctctctatttcaa 38706852  T
Q  184 tctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgttt 283  Q
    ||||||||||||||||||||| | || ||||       | ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  38706851 tctaaataagtgattttcacatagatttaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgttt 38706752  T
Q  284 gatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaa 383  Q
     ||||| | |||| || ||||||| |||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||| |||||||||||||| |    
T  38706751 catttcccgtcttcgtgcggtgttaatttgatttatattgaaagatcgattattcaatcgaagatttgggcatcaacgttgcaaatccggaggccatgga 38706652  T
Q  384 tattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| ||||||||||||||||||||||||||||||||| |||||    
T  38706651 tatttcggtcactttaattttatcatatatttttgtagacatta 38706608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 69 - 427
Target Start/End: Complemental strand, 10390008 - 10389652
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| || |||||||||| ||||| ||| |||||||||| ||||||||||||||||| | || | | ||||| || |  |||||||||||    
T  10390008 cggccctagttttctctttctaggttttctcttatagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcactca-tcttcatcttt 10389910  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    ||||||||| |||||||||||||||||| ||||||| | || ||||       |||| |||||||||||||||||||||||||||||||||||||||| |    
T  10389909 ttctctctatttcaatctaaataagtgactttcacatagatctaggtttttt-ccttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 10389811  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||||||||||||||||||||  | ||||  | ||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  10389810 tgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaaatatcgattattcaatcaacgatttgagcgtcaacgttgcaga 10389711  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||    
T  10389710 tccggaggccatggatattccgatcactttaattttatcatatatttttgtagacatta 10389652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 9529137 - 9528775
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||  |||| |||||||| ||||||||| |||||| ||| ||||||||||||||||| | || | | ||||| ||||| |||| ||    
T  9529137 aagtcggccctagttttatctctttaggttttctcttacagtttcttcactgaggggtggttttgggtcaattcttgacctgaaatcacccc-tctttat 9529039  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgt 263  Q
    |||||||||| || |||||||||||||||||||||||||| | || || |        ||| |||||||||||||||||||||| |||||||||||||||    
T  9529038 ctttttctctttatttcaatctaaataagtgattttcacatagatttatgttttttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgt 9528939  T
Q  264 cgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgtt 363  Q
    ||| |||||||||||||||||||||| | |||| || || |||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  9528938 cgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtcaacgtt 9528839  T
Q  364 gcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9528838 gcagatctggaggtcatggatattccggtcactttaattttatcatatatttttgtaggcatta 9528775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 43444227 - 43444583
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| ||||||||||||| ||||||| |  ||||||||| |||| |||||||||||| |||| ||| ||||| ||||  |||||||||||    
T  43444227 cggccctagttttctctctctaggttttctcttacaattccttcattgaggggtagttttgggtcaatttttgatctgaaatcaccca-tcttcatcttt 43444325  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    |||||| || |||||||||||||||||||||||||| | || ||||       | |||| |||||||||||||||||||||| ||||||||||||||| |    
T  43444326 ttctctttatttcaatctaaataagtgattttcacatatatctaggtttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtct 43444425  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||||||||||||||||||||  | |||  || ||||||| |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||    
T  43444426 tgtgcggcgttgtttgattttccgtctacgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatatgggcgtcaacgttgcaga 43444525  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||| ||| | ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43444526 tcc-gagacaatgaatattccggtcactttaatttcatcatatatttttgtaggcatta 43444583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 65 - 427
Target Start/End: Original strand, 9283741 - 9284102
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||| ||||||||||| | ||||||| | |||||||||| |||||||||||||||||   || | | ||||| ||||| |||||||    
T  9283741 aagtcggccctagttttctctctctaggttatctcttacaatttcttcattgaggggtggttttgggtcaatacttaacctgaaatcacccc-tcttcat 9283839  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 264  Q
    | |||||||| || |||||||||||||||||||||| ||| | || ||||         |||| |||||||||||||||||||||| ||||||||| |||    
T  9283840 cgttttctctttatttcaatctaaataagtgatttttacatagatctaggtttttttatttgtaatttcatcatctaagtgtggtgatttgttgtttgtc 9283939  T
Q  265 gtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttg 364  Q
    || ||||| |||||||||||||||| | |||| || ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  9283940 gtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacgttg 9284039  T
Q  365 cagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||| |||||| ||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  9284040 cagatctggaggcaatgaatatttcagtcactttaatttcatcatatatttttgtaggcatta 9284102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 43154279 - 43153912
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||| ||| ||||||||| |||| |||||||| ||||||| | | | ||||||  |||||||||||||||| | || |   ||||| ||||| |||||||    
T  43154279 aagttggccctagttttctctctttaggttttatcttacaatttatccattgagaggtggttttgggtcaattcttgacttgaaatcacccc-tcttcat 43154181  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn-------ccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    ||||| ||||||| |||||||||||||||||||||||||| | || ||||              | ||||||||| ||||| ||||||||||||||||||    
T  43154180 ctttt-ctctctatttcaatctaaataagtgattttcacatagatctaggtttttttgttttttctttgtgattttatcatttaagtgtggtggtttgtt 43154082  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    ||||||||| ||||| |||||||||||||||| | |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43154081 gttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 43153982  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43153981 aacgttacagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggcatta 43153912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 69 - 427
Target Start/End: Complemental strand, 50766766 - 50766410
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtct--tcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatct 166  Q
    |||| ||||||||  ||||||||||||| ||||||| | |||  |||||||  |||||||||||||||| | || ||| ||||| | ||| |||||||||    
T  50766766 cggccctagttttttctctctaggttttctcttacaatttctcttcattgagaggtggttttgggtcaattcttgatctgaaatcatccc-tcttcatct 50766668  T
Q  167 ttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 266  Q
    |||||||| || |||||||||||||| ||||||||||| | || || |       | |||| |||||||||||||||||||||| |||||||||||||      
T  50766667 ttttctctttatttcaatctaaataaatgattttcacatagatctaagtttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtc-- 50766570  T
Q  267 attgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgca 366  Q
     |||||||||||||||||||||| | |||| || ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  50766569 -ttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatctattgttcaatcaaagatttgagcgtcaacgttgca 50766471  T
Q  367 gatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  50766470 gatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 50766410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 84 - 427
Target Start/End: Complemental strand, 34024676 - 34024336
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    |||||||| |||||||||  ||| |||||||||| |||||||||||| |||| | || | | ||||| ||||| |||||||||||||||||||| |||||    
T  34024676 ctctctagattttttcttttagtttcttcattgaggggtggttttggatcaattcttgacctgaaatcacccc-tcttcatctttttctctctatttcaa 34024578  T
Q  184 tctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgttt 283  Q
    ||||||||||| ||||||||| | || ||||       | || |||||||||||||||||||||||||||||||||||||||| ||||  | ||||||||    
T  34024577 tctaaataagttattttcacatagatctaggtttttt-ctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtatgacgttgttt 34024479  T
Q  284 gatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaa 383  Q
    |||||  ||||||  | |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  34024478 gattttccatcttcttgcggtgttc-tttgattcatattgaaagatcgattattcaatcaacgatttgagcgtcaacgttgcagatccggaggccatgga 34024380  T
Q  384 tattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||    
T  34024379 tattccggtcattttaattttatcatatatttttgtaagcatta 34024336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 69 - 427
Target Start/End: Complemental strand, 53616906 - 53616548
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||| ||||| ||||||||||||| ||||||| | ||||| |||| |||||  |||||||||| | || | | ||||| ||| | |||||||| ||    
T  53616906 cggccctaattttctctctctaggttttctcttacaatttcttcgttgaggggtgactttgggtcaattcttgacctgaaatcaccac-tcttcatcgtt 53616808  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgta 267  Q
    |||||| || |||||||||||||||||||||||||| | || ||||        ||| || |||||||||||||||||||||| |||||||||||||||     
T  53616807 ttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtc 53616708  T
Q  268 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcag 367  Q
    |||||||||||||||||||||| | |||| || ||||||| |||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||    
T  53616707 ttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcaattgttcaatcaaagatttgggcgtcaacgttgcag 53616608  T
Q  368 atccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||| ||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  53616607 atccggaggcaatggatattccggtcactttaatttcattatatatttttgtaggcatta 53616548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 78 - 419
Target Start/End: Complemental strand, 31381917 - 31381578
Alignment:
Q  78 ttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctcta 177  Q
    ||||| |||||||| |||| |||||| || ||||| |||| ||||||||||||||||| | || | | ||||| ||||| ||| |||||||||||||||     
T  31381917 ttttctctctctagattttctcttacggtttcttcgttgatgggtggttttgggtcaattcttgacctgaaatcaccccttct-catctttttctctctt 31381819  T
Q  178 attcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcg 277  Q
     |||||| ||||||||||||||||||| | || || |       | ||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  31381818 tttcaatttaaataagtgattttcacatagatctaagtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcg 31381720  T
Q  278 ttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 377  Q
    |||||||||||  | |||| || ||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| || ||||||     
T  31381719 ttgtttgattttccgtcttcgtgcggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgggcgtcaacattgcaaattcggaggt 31381620  T
Q  378 catgaatattccggtcactttaattttatcatatatttttgt 419  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  31381619 catgaatactccggtcactttaattttatcatatatttttgt 31381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 74 - 427
Target Start/End: Original strand, 1531745 - 1532099
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttt-tct 172  Q
    ||||||||| || |||||||||| ||||||||| |||||||||| ||||||| ||||||||| | || | | ||||| ||||| |||| ||||||| |||    
T  1531745 ctagttttctctttctaggttttctcttacagtttcttcattgaggggtggtattgggtcaattcttgacctgaaatcacccc-tctttatcttttctct 1531843  T
Q  173 ctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgt 271  Q
    ||||| |||||||||||||||||||||||||| | || |||         ||| ||||||||||||||||||||||||||||||||||  ||||| ||||    
T  1531844 ctctatttcaatctaaataagtgattttcacatagatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgtctgtcgtcttgt 1531943  T
Q  272 gcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    | ||||||||||||||||   |||| || ||||||||||||||||||| |||||||||| |||||||||||||| ||||| |||||||||||||||| ||    
T  1531944 gtggcgttgtttgatttcctgtcttcgtgcggtgtttatttgattcatgttgaaagatcaattattcaatcaaaaatttgggcgtcaacgttgcagaacc 1532043  T
Q  372 ggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||| |||| |||||| || ||||||||||||||||||||||||||||| |||||    
T  1532044 ggaggtcatggatattctggacactttaattttatcatatatttttgtagacatta 1532099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 64 - 427
Target Start/End: Original strand, 867986 - 868354
Alignment:
Q  64 aaagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttca 163  Q
    |||| |||| ||||||||| ||||||||||||| |||| |||| |||||||||| |||||||||| |||| | | || |   ||||| ||||| ||||||    
T  867986 aaagccggccctagttttctctctctaggttttctcttccagtttcttcattgaggggtggttttaggtcgattcttgacatgaaatcacccc-tcttca 868084  T
Q  164 tctttttctctctaattcaa-------tctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgt 256  Q
    |||||||||||||| |||||       ||||||||||| ||||||||| | || |||        | |||||||||||||||||||||||||||||||||    
T  868085 tctttttctctctatttcaaatttcaatctaaataagttattttcacatagatctag--atttttctttgtgatttcatcatctaagtgtggtggtttgt 868182  T
Q  257 tgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgt 356  Q
    |||||||||| |||||||||||||||||||||| | ||||  | ||||||| |||||||||||||||||||||| ||||||||||||||||||||   ||    
T  868183 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttggatgt 868282  T
Q  357 caacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatattttt-gtaggcatta 427  Q
     ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  868283 gaacgttgtagatccggaggccatggatattccggtcactttaattttatcatatatttttggtaggcatta 868354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 82 - 427
Target Start/End: Original strand, 51317832 - 51318176
Alignment:
Q  82 cactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaattttt-atcggaaattaccccctcttcatctttttctctctaatt 180  Q
    |||||||||| || | ||||  ||| |||||||||| ||||| ||||||||||| | ||| | | ||||| || |  |||||||||||||||||||| ||    
T  51317832 cactctctagattgtctcttctagtttcttcattgaggggtgattttgggtcaattctttgacctgaaatcactca-tcttcatctttttctctctattt 51317930  T
Q  181 caatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttg 280  Q
    |||||||||||||||||||||||| | || ||||       | || |||||||||||||||||||||||| ||||||||||||||| ||||||||| |||    
T  51317931 caatctaaataagtgattttcacatagatctaggtttttt-ctttttgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcattg 51318029  T
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccat 380  Q
    ||||||||| | ||||  | ||||||| ||||||||||||||||||||| |||| |||||||||  ||||| |||||||||||||||||||||||| |||    
T  51318030 tttgatttcccgtcttcttgcggtgttaatttgattcatattgaaagattgattgttcaatcaacaatttgggcgtcaacgttgcagatccggaggtcat 51318129  T
Q  381 gaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    | |||||||||||||||||||||||||||||||||||||||||||||    
T  51318130 ggatattccggtcactttaattttatcatatatttttgtaggcatta 51318176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 75 - 427
Target Start/End: Complemental strand, 2115837 - 2115486
Alignment:
Q  75 tagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctct 174  Q
    |||||||| |||||||| |||||||||||| | | |||||||| ||||||||||||||||| | || | | ||||| ||    |||||||||||||||||    
T  2115837 tagttttctctctctagattttttcttacaatttattcattgaggggtggttttgggtcaattattgacctgaaatcacttt-tcttcatctttttctct 2115739  T
Q  175 ctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgc 273  Q
     || |||||||||||||||||||||||||| | || ||||        ||| || |||||||||||||||||||||| ||||||||| ||||| ||||||    
T  2115738 ttatttcaatctaaataagtgattttcacatagatttaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgtttgtcgtcttgtgc 2115639  T
Q  274 ggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgg 373  Q
    |  |||||||||||||||||||| || || | || |||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||    
T  2115638 gt-gttgtttgatttctcatcttcgtgcgatattcatttaattcatattgaaagatcgattgttcaatcaaaaatttgggcgtcaacgttgcagatccgg 2115540  T
Q  374 aggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  2115539 aggcaatggatattccagtcactttaatttcatcatatatttttgtaggcatta 2115486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 6972644 - 6973001
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||| ||||| |||||||||||||||||| | || |||||||||  ||||||||||||||||| | || ||| ||||| ||| | |||||||||||    
T  6972644 cggccctaattttctctctctaggttttttcttccggtttcttcattgg-gggtggttttgggtcaattcttgatctgaaatcacctc-tcttcatcttt 6972741  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgta 267  Q
    || ||| || |||||||||||||||||| ||| ||| | ||  | |        ||| |||||||||||||||||||||||||||||||||||||||||     
T  6972742 ttatctgtatttcaatctaaataagtgacttttacatagatccatgttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 6972841  T
Q  268 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcag 367  Q
    ||||||||||||||||| ||||   ||||  | | ||||| |||| |||| |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  6972842 ttgtgcggcgttgtttgctttcctgtcttcttgcagtgttcattttattcctattgaaagatcgattattcaatcaaaggtttgggcgtcaacgttgcag 6972941  T
Q  368 atccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  6972942 atccggaggccatggatattccggtgactttaattttatcatatatttttgtaggtatta 6973001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 69 - 426
Target Start/End: Complemental strand, 37188847 - 37188494
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| ||||||||||||| ||||  ||  | ||||| || | ||||||||||||||| | || | | ||||| || |  |||||||||||    
T  37188847 cggccctagttttctctctctaggttttctcttctagatttttcatcgaggagtggttttgggtcaattattgacctgaaatcactca-tcttcatcttt 37188749  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    |||||| || |||||||||||||||||||||||||| | || |||        | ||||||||||||||| ||||||||||||||||||||||||||| |    
T  37188748 ttctctatatttcaatctaaataagtgattttcacatatatctag--ttttttctttgtgatttcatcatttaagtgtggtggtttgttgttcgtcgttt 37188651  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||||||||| ||||||||||| |  |||  | ||||||| || |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  37188650 tgtgcggcgctgtttgatttcccgcctttttgcggtgttcatctgattcattttgaa-gatcgattattcaatcaaagatttgggcgtcaacgttgcaga 37188552  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    ||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||    
T  37188551 tccggaggccatggatattcctgtcactttaattttatcatataattttgtaggcatt 37188494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 65 - 426
Target Start/End: Original strand, 44947233 - 44947602
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattacccc-----ctc 159  Q
    |||||||  ||||||||| ||||||| ||||| ||||||||| |||||||||| ||||||||||||||||| | || | | ||||| ||| |     |||    
T  44947233 aagtcggtcctagttttctctctctaagttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacctctctctctc 44947332  T
Q  160 ttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn---ccttgtgatttcatcatctaagtgtggtggtttgt 256  Q
    |   ||| | |||||||   |||||||||||||||||||||| || | || ||||          | |||||||||||| ||||||||||||||||||||    
T  44947333 tctctctctctctctctctctcaatctaaataagtgattttcgcatagatctaggttttttttttctttgtgatttcattatctaagtgtggtggtttgt 44947432  T
Q  257 tgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgt 356  Q
    || | || || |||||||||||||||||||||| | |||| ||  |||||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  44947433 tggttgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcatttgattaatattgaaagatcgattattcaatcaaagatttgggcgt 44947532  T
Q  357 caacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44947533 caacgttgcagatccgaaggccatggatattccggtcactttaattttatcatatatttttgtaggcatt 44947602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 167 - 427
Target Start/End: Original strand, 29965565 - 29965826
Alignment:
Q  167 ttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcg 265  Q
    |||||||| || |||||||||||||||||||||||||| | || ||||        ||| || |||||||||||||||||||||| ||||||||||||||    
T  29965565 ttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcg 29965664  T
Q  266 tattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgc 365  Q
    | |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  29965665 tcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagattgattgttcaatcaaagatttgggcatcaacgttgc 29965764  T
Q  366 agatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  29965765 agatccggaggtaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 29965826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 85 - 427
Target Start/End: Complemental strand, 35965214 - 35964874
Alignment:
Q  85 tctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaat 184  Q
    |||||||||||| |||| |||  |||||||||| ||||||||||||||||| |||||| | ||||| ||| | |||||||||||||||||||| ||||||    
T  35965214 tctctaggttttctcttccagattcttcattgaggggtggttttgggtcaattttttacctgaaatcacctc-tcttcatctttttctctctatttcaat 35965116  T
Q  185 ctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgttt 283  Q
    || ||||||||||||| |||| | || ||||         | |||||||| |||||  ||||||||||| |||||||||||||  |||| ||||||||||    
T  35965115 ctgaataagtgatttttcacatagatctaggtttttttt-tcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcctgtgtggcgttgttt 35965017  T
Q  284 gatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaa 383  Q
    |||||| | ||||| |  |||||| |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||     
T  35965016 gatttcccgtcttattgtggtgttcatttgattcatattaaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggagg-catgag 35964918  T
Q  384 tattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| | |||||||||||||||||||||||||||||||| ||||    
T  35964917 tatttcagtcactttaattttatcatatatttttgtaggaatta 35964874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 245 - 427
Target Start/End: Original strand, 49410232 - 49410414
Alignment:
Q  245 gtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaa 344  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| | |||| || ||||||| ||||||||||||||||||||||||||||||||||||    
T  49410232 gtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaa 49410331  T
Q  345 agatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  49410332 agatttgggcgtcaacgttgcagatccggaggccgtgaatattcctgtcactttaattttatcatatatttttgtaggcatta 49410414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 20569086 - 20569448
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||||||||||||| | |||||||||||||| || | | |||||||||| ||||||||||||||||| | || | | ||||| ||||| ||||||| |||    
T  20569086 cggctctagttttctccctctaggttttttcgtataatttcttcattgatgggtggttttgggtcaattcttaacctgaaatcacccc-tcttcattttt 20569184  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn---ccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcg 265  Q
    |||||| || |||||||||||||| ||||||||||| | || ||||          | || | |||||||||||||||||||||| ||||||||||||||    
T  20569185 ttctctttatttcaatctaaataaatgattttcacatagatctaggttttttttttctttataatttcatcatctaagtgtggtgatttgttgttcgtcg 20569284  T
Q  266 tattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgc 365  Q
    | || ||||| ||||||||||||  | |||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  20569285 tcttctgcggggttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagattttggtgtcaacgttgc 20569384  T
Q  366 agatccggaggccatgaatattccggtcactttaattttatc--atatatttttgtaggcatta 427  Q
    | ||||  |||| ||| ||||||||||||||||||||| |||  ||||||||||||||||||||    
T  20569385 aaatccaaaggcaatggatattccggtcactttaatttcatcatatatatttttgtaggcatta 20569448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 84 - 427
Target Start/End: Complemental strand, 10359787 - 10359446
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaaggg-tggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattca 182  Q
    |||||||| |||| |||| |||| |||||||||| ||| |||||||||||||| |||| | | ||||| ||||   ||||||||||||||||||| |||     
T  10359787 ctctctagattttctctttcagtttcttcattgagggggtggttttgggtcaatttttgacctgaaatcacccaa-cttcatctttttctctctatttcg 10359689  T
Q  183 atctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtt 282  Q
    |||||||||||||||||| ||| | || ||||       | | ||||||||||||||||||||||||||||||||||||| ||| || ||||| ||||||    
T  10359688 atctaaataagtgattttaacatatatctaggtttttt-cttcgtgatttcatcatctaagtgtggtggtttgttgttcgccgtcttttgcggtgttgtt 10359590  T
Q  283 tgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatga 382  Q
    ||||||| | ||||  |  |||||| ||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||  |||| ||||     
T  10359589 tgatttcccgtcttcttgtggtgttcatttgattcatattgaaagatcgattattcaataaaagatttgggcatcaacgttgcagatcttgagg-catgg 10359491  T
Q  383 atattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||    
T  10359490 atattccagtcactttatttttatcatatatttttgtaggcatta 10359446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 231 - 427
Target Start/End: Original strand, 47417657 - 47417853
Alignment:
Q  231 ttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    |||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||||||||    
T  47417657 ttcatcatctaaatgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 47417756  T
Q  331 gattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||  |||||||||||| |||||||||||||||||||||||    
T  47417757 gattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccattcactttaatttcatcatatatttttgtaggcatta 47417853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 158 - 411
Target Start/End: Complemental strand, 8009526 - 8009275
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| | || |||        | ||||||||||||||||||||||||||||||||||    
T  8009526 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctag--ttttttctttgtgatttcatcatctaagtgtggtggtttgtt 8009429  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    ||||||||| |||||||||||||||||||||| | ||||  ||||||||| ||||||||| ||  ||||||| ||||||||||||||| ||||| |||||    
T  8009428 gttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcatacggtgttcatttgattcttacagaaagattgattattcaatcaaaaatttgggcgtc 8009329  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    ||||||| | ||||| || ||||| |||||||| ||||||||||||||||||||    
T  8009328 aacgttgtatatccgaagaccatggatattccgatcactttaattttatcatat 8009275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 162 - 427
Target Start/End: Original strand, 14183729 - 14183992
Alignment:
Q  162 catctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttc 261  Q
    |||||||||||||||| |||||||||||||||||||||||||||  || || |       | ||||||||||| ||||||||||||||||||||||||||    
T  14183729 catctttttctctctatttcaatctaaataagtgattttcacaaggatctaagtttttttctttgtgatttcaccatctaagtgtggtggtttgttgttc 14183828  T
Q  262 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 361  Q
    || || |||||||  ||||||||||||    ||||  | ||||||| |||||||||||||||||||||||| |||||||||||||||||  |||||||||    
T  14183829 gtagtcttgtgcgt-gttgtttgattttctgtcttcatgcggtgttcatttgattcatattgaaagatcgactattcaatcaaagattttggcgtcaacg 14183927  T
Q  362 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||| |||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  14183928 ttgcagaaccggagaccatggatattccggtcactttaattttatcaaat-tttttgtaggcatta 14183992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 69 - 395
Target Start/End: Complemental strand, 9645804 - 9645479
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| |||||||||  |||||||| ||| ||||||||| |||||||||| |||| |||||||||||| | || | | || || ||||| |||||||||||    
T  9645804 cggccctagttttctttctctaggctttatcttacagtttcttcattgaggggtcgttttgggtcaattcttgacctgatatcacccc-tcttcatcttt 9645706  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    || |||||| |||||||||||||||||| ||||||| | || ||||       | ||| ||||||||||||||||||||||||| ||||||||||||| |    
T  9645705 ttgtctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgcgatttcatcatctaagtgtggtggtgtgttgttcgtcgtct 9645606  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||||||||||||||||||||  | || | || || |||| |||||||||||||||| ||||   | ||||||| ||||||||| |||||||| |||||||    
T  9645605 tgtgcggcgttgtttgattttccgtcgtcgtgcgctgttcatttgattcatattgagagataagtaattcaataaaagatttgggcgtcaacattgcaga 9645506  T
Q  369 tccggaggccatgaatattccggtcac 395  Q
    ||||||||| ||| |||||||||||||    
T  9645505 tccggaggcgatggatattccggtcac 9645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 240 - 427
Target Start/End: Complemental strand, 45228126 - 45227939
Alignment:
Q  240 taagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattca 339  Q
    ||||||||||||||||||||||| ||| ||||||||  |||||| ||||| | |||| ||||| | || |||||||| | ||||||||||||||||||||    
T  45228126 taagtgtggtggtttgttgttcgccgtcttgtgcggtattgtttaatttcccgtcttcgtacgatattcatttgatttacattgaaagatcgattattca 45228027  T
Q  340 atcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45228026 atcaaagatttgggcgtcaacgttgcagattcggagaccatgaatattccggtcactttaattttatcatatatttttgtgggcatta 45227939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 158 - 427
Target Start/End: Complemental strand, 32952913 - 32952649
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    |||||||||||||||||||| |||||  |||||||||| |||||||| | || |||        | |||||||||| ||||||||||||| |||| ||||    
T  32952913 tcttcatctttttctctctatttcaaattaaataagtgtttttcacatagatctag--ttttttctttgtgatttcgtcatctaagtgtgttggtgtgtt 32952816  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    ||| ||||| || ||||| |||||||||||| |||||||  ||||||||| |||| |||||||||||||   ||||||||||||||||||||||||||||    
T  32952815 gtttgtcgtcttatgcgg-gttgtttgattt-tcatcttgttacggtgttcatttaattcatattgaaaatacgattattcaatcaaagatttgagcgtc 32952718  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    || ||||||| |||||| | |||| |||||||||||| |||||||||||| |||||||||||||||||||    
T  32952717 aatgttgcaggtccgga-gtcatggatattccggtcaatttaattttatcttatatttttgtaggcatta 32952649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 75 - 427
Target Start/End: Original strand, 21089992 - 21090333
Alignment:
Q  75 tagttttcactctctaggttttttcttacagtgtcttcattgaaggg-tggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    |||||||| ||||||||||||| ||||  ||| |||||||||| ||| ||||||||||||||  ||| ||| ||||| || |  ||||||||||||||||    
T  21089992 tagttttctctctctaggttttctcttctagtttcttcattgagggggtggttttgggtcaatctttgatctgaaatcactca-tcttcatctttttctc 21090090  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgc 273  Q
    |||| |||||| ||||||||||||||||||| | || ||||       | | ||||||||||||||||| | ||||||||||||||||||||| |||| |    
T  21090091 tctatttcaatataaataagtgattttcacatagatttaggtttttt-cttcgtgatttcatcatctaaatatggtggtttgttgttcgtcgtcttgtac 21090189  T
Q  274 ggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgat--tattcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    | ||||||||||||| || | ||  | ||||||| ||||||||||||||||| |||  ||  ||||||||||||||||||            ||||||||    
T  21090190 gacgttgtttgatttttcgtttttttgcggtgttcatttgattcatattgaaggataaattatattcaatcaaagatttg-----------ggcagatcc 21090278  T
Q  372 ggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||| | |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  21090279 ggaag-catgaatattccggtcactttaattttatcatctacttttgtaggcatta 21090333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 155 - 427
Target Start/End: Original strand, 49680456 - 49680728
Alignment:
Q  155 ccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn----ccttgtgatttcatcatctaagtgtggtg 250  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||||   || ||||           | |||| ||||||||||||||||||||||    
T  49680456 ccctcttcatctttttctctttatttcaatccaaataagtgattttcacatggatctaggtttttttttttctttgtaatttcatcatctaagtgtggtg 49680555  T
Q  251 gtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagattt 350  Q
     |||||| |||||||| |||||  | ||||||||||||| | |||| || |||     ||||||||||||||||||||| |||| |||||||||| ||||    
T  49680556 atttgttattcgtcgtcttgtgttgtgttgtttgatttcacgtcttcgtgcggac---atttgattcatattgaaagatagattgttcaatcaaatattt 49680652  T
Q  351 gagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    | |||||||||||||||||||||| || ||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  49680653 gggcgtcaacgttgcagatccggatgcaatg-atatttcggtcactttaatttcatcatatatttttgtaggcatta 49680728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 156 - 427
Target Start/End: Complemental strand, 18139082 - 18138812
Alignment:
Q  156 cctcttcatctttttctctctaattcaatctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggttt 254  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| |||| | || ||||       | |  ||||||| ||| || ||||||||||| |    
T  18139082 cctcttcatcattttctctctatttcaatctaaataagtgatttttcacatacatctaggtttttt-cttaatgatttcgtcacctgagtgtggtggtgt 18138984  T
Q  255 gttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagc 354  Q
    |||||||||||| |||||||||||||||||||||  ||||||  | | ||||| ||||||||  ||||||||||||||||||||||||| | ||||| ||    
T  18138983 gttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatcgattattcaatcacatatttgggc 18138884  T
Q  355 gtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||| || || |||   ||||||| |||||| ||||||||||||||||||||||| |||||    
T  18138883 gtcaacgttgcagatctgg-gggcattggtattccgatcacttaaattttatcatatatttttgtagtcatta 18138812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 168 - 427
Target Start/End: Complemental strand, 46991287 - 46991029
Alignment:
Q  168 tttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgta 267  Q
    |||||||||| |||||||||||| ||||||||||||| | || |||        | |  ||||||  |||||| ||||||||||| ||||||| |||||     
T  46991287 tttctctctatttcaatctaaatgagtgattttcacatagatctagatttttttcttcatgattttgtcatctgagtgtggtggtgtgttgtttgtcgtc 46991188  T
Q  268 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcag 367  Q
    || || |||||||||||||||| ||||||  | ||||||| |||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  46991187 ttctgtggcgttgtttgatttcccatcttgttgcggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggtgtcaacgttgcag 46991088  T
Q  368 atccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||  || | |||   ||| ||| ||||||||||||||||||||||||||||||||||||    
T  46991087 atctaga-gacatatgtatcccgatcactttaattttatcatatatttttgtaggcatta 46991029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 156 - 427
Target Start/End: Complemental strand, 49126295 - 49126025
Alignment:
Q  156 cctcttcatctttttctctctaattcaatctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggttt 254  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| |||| | || ||||       | |  ||||||| ||| || ||||||||||| |    
T  49126295 cctcttcatcattttctctctatttcaatctaaataagtgatttttcacatacatctaggtttttt-cttaatgatttcgtcacctgagtgtggtggtgt 49126197  T
Q  255 gttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagc 354  Q
    |||||||||||| |||||||||||||||||||||  ||||||  | | ||||| ||||||||  ||||||||||||||||||||||||| | ||||| ||    
T  49126196 gttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatcgattattcaatcacatatttgggc 49126097  T
Q  355 gtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||| || || |||   ||||||| |||||| ||||||||||||||||||||||| |||||    
T  49126096 gtcaacgttgcagatctgg-gggcattggtattccgatcacttaaattttatcatatatttttgtagtcatta 49126025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 156 - 351
Target Start/End: Original strand, 56194519 - 56194716
Alignment:
Q  156 cctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn--ccttgtgatttcatcatctaagtgtggtggtt 253  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||| | || ||||         | ||||||||||||||||||||||||||||||    
T  56194519 cctcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttttctttgtgatttcatcatctaagtgtggtggtt 56194618  T
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttg 351  Q
    ||||||||||||| ||||||||||||||||| |||| | ||||  | ||||||| |||| |||| ||||||||||||||||||| |||||||||||||    
T  56194619 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattatttaatcaaagatttg 56194716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 154 - 427
Target Start/End: Original strand, 12265373 - 12265653
Alignment:
Q  154 cccctcttcatctttttctctctaattcaatctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggt 252  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||| |||| | || ||||       |   |||||||  |||||| ||||||| |||    
T  12265373 cccctcttcatctttttatccctatttcaatctaaataagtgatttttcacatagatctaggttttct-ctacgtgattttgtcatctgagtgtggcggt 12265471  T
Q  253 ttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttga 352  Q
    |||||||||||||| | |||||||||||||||||||||| | |   |  |||||| | |||||||||||||||||||| |||||||||||||||||||||    
T  12265472 ttgttgttcgtcgtct-gtgcggcgttgtttgatttctcgtatcgttgtggtgttcacttgattcatattgaaagatcaattattcaatcaaagatttga 12265570  T
Q  353 gcgtcaacgttgcagatccggaggc--------catgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||||||||        ||||  ||||||  |||||||||||||||||||||||||| |||||||||    
T  12265571 gcgtcaacgttgcagatccggaggcatggaagacatgggtattccaatcactttaattttatcatatatttttttaggcatta 12265653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 226 - 427
Target Start/End: Complemental strand, 27593926 - 27593727
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    |||||||| | |||| ||||||||||| ||||||||||| | ||||||| | || ||||||||| | ||||  | || ||||||||| ||||||||||||    
T  27593926 gtgatttcgttatctgagtgtggtggtgtgttgttcgtcatcttgtgcgactttttttgatttcccgtctttttgcgatgtttatttaattcatattgaa 27593827  T
Q  326 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 425  Q
    |||||||||||||||| ||||||||| | |||||| ||||||||| ||| ||||||| |||||| |||||||||||||||||||||||||||||||| ||    
T  27593826 agatcgattattcaataaaagatttg-gagtcaacattgcagatctgga-gccatgagtattcctgtcactttaattttatcatatatttttgtaggaat 27593729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 69 - 375
Target Start/End: Original strand, 2624331 - 2624636
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||  ||||||||||||| ||||  ||| |||| ||||| ||||| ||||||||  | |||| | | ||||| || |  || ||||||||    
T  2624331 cggccctagttttttctctctaggttttctcttctagtttctttattgaggggtgattttgggttgatttttgacctgaaataactca-tcatcatcttt 2624429  T
Q  169 ttctc-tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgta 267  Q
    || |  |||| |||||||||||||||||||||||||| | || ||||       | | |||||||| ||||   ||||||||||| |||||||||||||     
T  2624430 ttatagtctatttcaatctaaataagtgattttcacatagatctaggtttttttcttcgtgatttcgtcatg--agtgtggtggtgtgttgttcgtcgtc 2624527  T
Q  268 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga-tcgattattcaatcaaagatttgagcgtcaacgttgca 366  Q
    ||||||||||| |||||||||| | ||||  | |||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  2624528 ttgtgcggcgtagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaaagattcgattattcaatcaaagaattgggcgtcaacgttgca 2624627  T
Q  367 gatccggag 375  Q
    |||| ||||    
T  2624628 gatctggag 2624636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 226 - 427
Target Start/End: Complemental strand, 3336256 - 3336062
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcgg-cgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 324  Q
    |||||||  |||||| ||||||||||| |||||||||||||  ||||||| |||||||||||||  ||||||  | ||||||| ||||||||||||||||    
T  3336256 gtgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcctgtgcggacgttgtttgattttccatcttgttgcggtgttcatttgattcatattga 3336157  T
Q  325 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 424  Q
    ||||| ||||||||||||||||||||| |||||| | ||||||||||||||       | |||||| ||| |||||||||||||||||| ||||||||||    
T  3336156 aagattgattattcaatcaaagatttg-gcgtcagcattgcagatccggag-------acattccgatcattttaattttatcatatatatttgtaggca 3336065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 245 - 427
Target Start/End: Complemental strand, 52097996 - 52097814
Alignment:
Q  245 gtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaa 344  Q
    |||||||| ||||||| || || |||||| | ||||||||||||| | | ||  |   ||||| |||||||||||||||||||||| |||||||||||||    
T  52097996 gtggtggtgtgttgtttgttgtcttgtgcagagttgtttgatttcccctattcttgtagtgttcatttgattcatattgaaagatcaattattcaatcaa 52097897  T
Q  345 agatttgagc-gtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||| || |||||||||||||||| ||| || ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  52097896 agatttgggccgtcaacgttgcagatctggatgc-atggatattccggtcactttaattttatcatatatctttgtaggcatta 52097814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 84 - 427
Target Start/End: Original strand, 35261037 - 35261383
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattacc---ccctcttcatctttttc-tctctaat 179  Q
    ||||||||||||| ||||   || |||||||||| ||||| ||||||||||| |||| | | ||||| | |   ||||||||||||||||| ||| || |    
T  35261037 ctctctaggttttctcttctcgtttcttcattga-gggtgattttgggtcaatttttgacctgaaataatcatcccctcttcatctttttcctctttatt 35261135  T
Q  180 tcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
     |||||||||||||||||||||||| | || ||||       | | ||||||| ||||||||||||||||||| ||||||| ||||| || |||||||||    
T  35261136 gcaatctaaataagtgattttcacatagatttaggtttttt-cttcgtgatttgatcatctaagtgtggtggtgtgttgtttgtcgtcttctgcggcgtt 35261234  T
Q  280 gtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcga----ttattcaatcaaagatttgagcgtcaacgttgcagatccggag 375  Q
    |||||||||  | ||||  | ||||||| |||||||||||||| ||||||| |    | ||||||||||||| ||| |  |||||||||||||||||||     
T  35261235 gtttgattttccgtcttcttgcggtgttcatttgattcatattaaaagatcaactattcattcaatcaaagaattg-gtttcaacgttgcagatccgga- 35261332  T
Q  376 gccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    | ||||  |||| |||||| ||||||||||||| |||| ||||||| |||||    
T  35261333 gacatg-gtatttcggtcattttaattttatcagatatgtttgtagacatta 35261383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 411
Target Start/End: Original strand, 23100745 - 23100853
Alignment:
Q  302 ggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaat 401  Q
    |||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||||||||| || | ||||  |||| |||||| ||||||    
T  23100745 ggtgttcatttgattcatattgaaagatcaattattcaatcaatgatttgagtgtcaaagttgcagatcc-gatgtcatgggtatttcggtcaatttaat 23100843  T
Q  402 tttatcatat 411  Q
    | ||||||||    
T  23100844 tgtatcatat 23100853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 47416736 - 47416852
Alignment:
Q  87 tctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatct 186  Q
    |||||||||| ||||||| | |||||||||| ||||| ||||||||||| | || |   ||||| | ||||||||||||||||||||| || ||||||||    
T  47416736 tctaggttttctcttacaatttcttcattgaggggtgattttgggtcaattattgacttgaaatca-cccctcttcatctttttctctttatttcaatct 47416834  T
Q  187 aaataagtgattttcaca 204  Q
    ||||||||||||||||||    
T  47416835 aaataagtgattttcaca 47416852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 427
Target Start/End: Original strand, 56199215 - 56199287
Alignment:
Q  355 gtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||||||||| |||||    
T  56199215 gtcaacgttgcagatccgaaagccatgaatattccgatgactttaattttatcatatatttttgtagacatta 56199287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 411
Target Start/End: Original strand, 26123280 - 26123436
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    ||||||||||||| |||||||| ||||||| |||| |||||||  |   ||||| ||||| ||| |||||||||||||  | |||||| || || ||| |    
T  26123280 tgttgttcgtcgttttgtgcggtgttgtttaatttttcatcttgttgtagtgttcatttggttcttattgaaagatcggctcttcaatgaatgacttgtg 26123379  T
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    |||||| |||||| ||||||||| ||||| ||||   |||||||||||||||||||||    
T  26123380 cgtcaatgttgcaaatccggagg-catgagtattattgtcactttaattttatcatat 26123436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 5333768 - 5333656
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    ||||||||||||| |||| | || |||||||||  ||||||||||||||||| |||| |   |||||  | ||||||||||||||||||||||| |||||    
T  5333768 ctctctaggttttctcttcccgtttcttcattg--gggtggttttgggtcaatttttgacatgaaat--caccctcttcatctttttctctctatttcaa 5333673  T
Q  184 tctaaataagtgatttt 200  Q
    | |||||||||||||||    
T  5333672 tataaataagtgatttt 5333656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 410
Target Start/End: Original strand, 36184599 - 36184706
Alignment:
Q  302 ggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaat 401  Q
    |||||| ||||||||  ||||||||||||| |||||||||||| |||||  | |||||||||| ||||| ||||| ||| ||||||  ||||||||| ||    
T  36184599 ggtgttcatttgatttctattgaaagatcggttattcaatcaatgattttggtgtcaacgttgtagatcaggagg-cataaatattatggtcactttgat 36184697  T
Q  402 tttatcata 410  Q
    |||||||||    
T  36184698 tttatcata 36184706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 336 - 411
Target Start/End: Complemental strand, 28834238 - 28834164
Alignment:
Q  336 ttcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    ||||||||| ||||| || |||||||||| |||||||||| | |||| ||||||||||||||||||||||||||||    
T  28834238 ttcaatcaacgattttagtgtcaacgttgtagatccggagac-atgactattccggtcactttaattttatcatat 28834164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 411
Target Start/End: Complemental strand, 43353629 - 43353468
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga-----tcgattattcaatcaaagat 348  Q
    ||||||||||||| ||||| | ||||||||||||| | |||||  ||||  ||| ||||||||| |||||||| |     ||| |||||||||||| |||    
T  43353629 tgttgttcgtcgtcttgtgtgtcgttgtttgattttttatcttgttacgtcgttcatttgattcctattgaaataaaatatcggttattcaatcaatgat 43353530  T
Q  349 ttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    |||||||||||||||||| || |||| |  || | |||| |  ||||||||||||||||||||    
T  43353529 ttgagcgtcaacgttgcaaattcggatg-aataagtatttcaatcactttaattttatcatat 43353468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 27594091 - 27593959
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||  ||||||||||||| |||| || | |||||||||| ||||| |||| |||||| |||| |   |||||  | ||||||||||||||    
T  27594091 cggccctagtttttcctctctaggttttctcttccact-tcttcattgatgggtgattttaggtcaatttttgacatgaaat--caccctcttcatcttt 27593995  T
Q  169 ttctctctaattcaatctaaataagtgattttcaca 204  Q
    |||||| || ||||||||||||||| || |||||||    
T  27593994 ttctctatatttcaatctaaataagcgagtttcaca 27593959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 9645476 - 9645422
Alignment:
Q  373 gaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  9645476 gaggcgatggatattccggtcactttaattttatcatatacttttgtaggtatta 9645422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 330
Target Start/End: Original strand, 28857378 - 28857484
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    ||||||||||||| |||||||| || | | |||||||||| || |||||||||||||||||||| | | |||   | |||||||  |||| |||||||||    
T  28857378 ttgtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgattccgcgtctagttgcggtgttcgtttgtttcatattg 28857477  T
Q  324 aaagatc 330  Q
    |||||||    
T  28857478 aaagatc 28857484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 229 - 330
Target Start/End: Complemental strand, 52934072 - 52933970
Alignment:
Q  229 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgttta-tttgattcatattgaaag 327  Q
    |||||||| ||| |||| || | | ||||||||||| | |||||| ||||||||||||||| ||||||  | ||||| ||| ||||||||||||||||||    
T  52934072 atttcatcgtctgagtgcggcgttgtgttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgttgcggtgcttattttgattcatattgaaag 52933973  T
Q  328 atc 330  Q
    |||    
T  52933972 atc 52933970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 425
Target Start/End: Complemental strand, 1931692 - 1931651
Alignment:
Q  384 tattccggtcactttaattttatcatatatttttgtaggcat 425  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  1931692 tattccagtcactttaattttatcatatatttttgtaggcat 1931651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 50179611 - 50179671
Alignment:
Q  75 tagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaa 135  Q
    |||||||| |||||||| |||| ||||||||| ||| |||||| |||||||||||||||||    
T  50179611 tagttttctctctctagcttttctcttacagtttctccattgaggggtggttttgggtcaa 50179671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 1008221 - 1008268
Alignment:
Q  162 catctttttctctctaattcaatctaaataagtgattttcacaaaaat 209  Q
    |||||||||||||||| || ||||||||||||||||||||||| ||||    
T  1008221 catctttttctctctattttaatctaaataagtgattttcacataaat 1008268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 1931817 - 1931723
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattca 318  Q
    ||||||||||||||||||||||| ||||| ||||||||  ||| |||| || | |||||| ||||| | ||||  | ||||||| ||||||||||    
T  1931817 ttgtgatttcatcatctaagtgtagtggtgtgttgttcaccgtcttgtccgacattgtttcatttcccgtcttgttgcggtgttcatttgattca 1931723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 5333626 - 5333584
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgatttt 200  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  5333626 tcttcatctttttctctctatttcaatataaataagtgatttt 5333584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Original strand, 23100617 - 23100651
Alignment:
Q  166 tttttctctctaattcaatctaaataagtgatttt 200  Q
    |||||||||||||||||||||||||||||||||||    
T  23100617 tttttctctctaattcaatctaaataagtgatttt 23100651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 7273776 - 7273712
Alignment:
Q  362 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| || |||| |||| | || | ||||||||||||||||||||||||||||||||    
T  7273776 ttgcagatccggaagc-atgagtatttcagttattttaattttatcatatatttttgtaggcatta 7273712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 404
Target Start/End: Original strand, 40068694 - 40068778
Alignment:
Q  319 tattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatttt 404  Q
    ||||||||||| |  |||||||| || | || || |||||||||||||||||| ||| | |||||||||||| |||||||||||||    
T  40068694 tattgaaagattggctattcaattaatgtttcgaccgtcaacgttgcagatccagagac-atgaatattccgatcactttaatttt 40068778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 9643394 - 9643470
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||  | | |||||  |||| |||||||| |||||||    
T  9643394 tgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatattaaaagatc 9643470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 21662541 - 21662577
Alignment:
Q  338 caatcaaagatttgagcgtcaacgttgcagatccgga 374  Q
    ||||||| |||||||||||||||||||||||||||||    
T  21662541 caatcaatgatttgagcgtcaacgttgcagatccgga 21662577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 21671305 - 21671341
Alignment:
Q  338 caatcaaagatttgagcgtcaacgttgcagatccgga 374  Q
    ||||||| |||||||||||||||||||||||||||||    
T  21671305 caatcaatgatttgagcgtcaacgttgcagatccgga 21671341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 26742428 - 26742380
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| |||||||||||||||||| ||||||||||    
T  26742428 tttgatttcccgtcttagtgcggtgtttatttgattcagattgaaagat 26742380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 36194711 - 36194751
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 294  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  36194711 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatc 36194751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 407
Target Start/End: Complemental strand, 49072785 - 49072682
Alignment:
Q  303 gtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatt 402  Q
    ||||| ||||| |||||||||||||||| | |||||||| || |||||  | |||||||||||| |||| || | ||| ||||||||  ||||||| |||    
T  49072785 gtgttcatttggttcatattgaaagatcaactattcaattaatgatttaggtgtcaacgttgcatatcctga-gacataaatattccaatcactttcatt 49072687  T
Q  403 ttatc 407  Q
    |||||    
T  49072686 ttatc 49072682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 51888314 - 51888238
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    |||||||| |||| || |||| |||||||||||||| ||||||  | |||||||  |||| ||||||||||||||||    
T  51888314 tgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggttcatattgaaagatc 51888238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 52944317 - 52944393
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| |||||||||||||||| ||||  | ||||  | |||||||  |||| ||||||||||||||||    
T  52944317 tgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatattgaaagatc 52944393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 317
Target Start/End: Complemental strand, 55600498 - 55600466
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattc 317  Q
    |||||||||||||||||||||||||||||||||    
T  55600498 atttctcatcttagtacggtgtttatttgattc 55600466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 289
Target Start/End: Original strand, 22300855 - 22300890
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttc 289  Q
    ||||||||||||| ||||||||||||||||||||||    
T  22300855 tgttgttcgtcgtcttgtgcggcgttgtttgatttc 22300890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 22611284 - 22611373
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    |||||| ||| ||||||  ||||||||||||||||||||| | ||||| |||| |||| |||| | ||||||||||| | ||||||||||||    
T  22611284 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catgagtatttcggtgacttaagttttatcatat-tatttgtaggcatt 22611373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 29965505 - 29965568
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggtttt 128  Q
    |||||||| ||| ||||| ||||||||||||| ||||||| | | |||||||| ||||||||||    
T  29965505 aagtcggccctaattttctctctctaggttttctcttacaattttttcattgaggggtggtttt 29965568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 32766493 - 32766548
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    |||||||||| || |||||||| |||| | ||||||||||||| ||||||||||||    
T  32766493 ttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 32766548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 374
Target Start/End: Original strand, 33921155 - 33921194
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccgga 374  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  33921155 attcaatcaataatttgagcgtcaacgttgcagatccgga 33921194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 53811129 - 53811218
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    |||||| ||| ||||||  ||||||||||||||||||||| | ||||| |||| |||| |||| | ||||||||||| | ||||||||||||    
T  53811129 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catgagtatttcggtgacttaagttttatcatat-tatttgtaggcatt 53811218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 351
Target Start/End: Original strand, 1008322 - 1008364
Alignment:
Q  309 atttgattcatattgaaagatcgattattcaatcaaagatttg 351  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||    
T  1008322 atttgattcatattaaaatatcgattattcaatcaatgatttg 1008364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 326
Target Start/End: Complemental strand, 2069712 - 2069611
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    |||||||||| | |||||||||||| | | ||| ||||||| |  |||||| |||||||||||||| ||||||  | |||| || ||||| |||||||||    
T  2069712 ttgtgatttctttatctaagtgtggcgttatgt-gttcgtcatcctgtgcgacgttgtttgatttcgcatcttgttgcggtattcatttggttcatattg 2069614  T
Q  324 aaa 326  Q
    |||    
T  2069613 aaa 2069611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 29922989 - 29923039
Alignment:
Q  279 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||  | ||||||||||||||||||||||||||  |||||||||    
T  29922989 tgtttgattttccgtcttagtacggtgtttatttgattcaggttgaaagat 29923039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 288
Target Start/End: Complemental strand, 47320494 - 47320460
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgattt 288  Q
    ||||||||||||| |||||||||||||||||||||    
T  47320494 tgttgttcgtcgtcttgtgcggcgttgtttgattt 47320460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 4142885 - 4142820
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttc 289  Q
    |||||||||| || |||||||| || | | ||||||||||||| ||||||||||  ||||||||||    
T  4142885 ttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcggcgtttgatttc 4142820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 21405440 - 21405481
Alignment:
Q  163 atctttttctctctaattcaatctaaataagtgattttcaca 204  Q
    ||||||| ||||||| |||||||||| |||||||||||||||    
T  21405440 atcttttcctctctatttcaatctaattaagtgattttcaca 21405481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 32616825 - 32616776
Alignment:
Q  280 gtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    |||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  32616825 gtttgatttcccgtcttagtgcggtgtttatttgattcaagttgaaagat 32616776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 326
Target Start/End: Complemental strand, 36204516 - 36204415
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcgg-cgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 324  Q
    |||||||| || |||||||| || | | |||||||||||||  ||| ||| |||||||||||||| ||| ||  | ||||||| ||||| ||||||||||    
T  36204516 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttcatttggttcatattga 36204417  T
Q  325 aa 326  Q
    ||    
T  36204416 aa 36204415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 44757007 - 44756958
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||  ||||||||| ||||||||||||||||||  ||||||||||    
T  44757007 tttgattttccatcttagtgcggtgtttatttgattcaggttgaaagatc 44756958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 7861171 - 7861123
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  7861171 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 7861123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 411
Target Start/End: Complemental strand, 19853520 - 19853445
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    |||||| ||| ||||||  ||||||||||||||||||||| | |||| ||||| |||| |||| | |||||||||||    
T  19853520 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catggatatttcggtgacttaagttttatcatat 19853445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 20399868 - 20399820
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  20399868 tttgatttcccgtcttagtgcggtgtttatttgattcagtttgaaagat 20399820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 23329094 - 23329138
Alignment:
Q  160 ttcatctttttctctctaattcaatctaaataagtgattttcaca 204  Q
    ||||||||||| |||||| ||||| |||||||| |||||||||||    
T  23329094 ttcatctttttatctctatttcaacctaaataactgattttcaca 23329138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 24789345 - 24789393
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| ||||||| | ||||||||||||||||  |||||||||    
T  24789345 tttgatttctcgtcttagtgcagtgtttatttgattcaggttgaaagat 24789393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 24818914 - 24818866
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| ||||||| | ||||||||||||||||  |||||||||    
T  24818914 tttgatttctcgtcttagtgcagtgtttatttgattcaggttgaaagat 24818866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 27651946 - 27651986
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 294  Q
    ||||||||||||| |||||||| ||||||||||||| ||||    
T  27651946 tgttgttcgtcgtcttgtgcggtgttgtttgatttcgcatc 27651986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 29268742 - 29268694
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  29268742 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 29268694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 39523569 - 39523613
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||||    
T  39523569 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 39523613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 40198510 - 40198462
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| |||||||  |||||||||||||||||  |||||||||    
T  40198510 tttgatttctcgtcttagtgtggtgtttatttgattcaggttgaaagat 40198462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 43493252 - 43493204
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| ||||||||| | ||||||||||||||||  |||||||||    
T  43493252 tttgatttcccatcttagtgctgtgtttatttgattcaggttgaaagat 43493204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 49072922 - 49072878
Alignment:
Q  160 ttcatctttttctctctaattcaatctaaataagtgattttcaca 204  Q
    ||||| ||||||||| || ||||||||| ||||||||||||||||    
T  49072922 ttcatatttttctctttatttcaatctatataagtgattttcaca 49072878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 52098084 - 52098044
Alignment:
Q  160 ttcatctttttctctctaattcaatctaaataagtgatttt 200  Q
    |||||| ||||||| ||| ||||||||||||||||||||||    
T  52098084 ttcatccttttctccctatttcaatctaaataagtgatttt 52098044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 90)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 74 - 427
Target Start/End: Original strand, 6173463 - 6173815
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||| ||||||||||||| | |||| || |||||||||| |||||||||| |||| | | || | | ||||| ||||| ||||||||||||||||    
T  6173463 ctagttttctctctctaggttttcttttacggtttcttcattgaggggtggttttcggtctattcttgacctgaaatcacccc-tcttcatctttttctc 6173561  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgc 273  Q
    |||| |||||||||||||||||||||||||| | || ||||       | |||||||||||||||| ||||||||||||||||||||||| || |||||     
T  6173562 tctatttcaatctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatcgaagtgtggtggtttgttgttcgttgtcttgtgt 6173661  T
Q  274 ggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgg 373  Q
    |||||||||||||||  |||||| || ||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  6173662 ggcgttgtttgattttccatctttgtgcggtgttcatttgattcatattgaaagatcgatcattcaatcaaagatttgggcgtcaacgttgcagatccgg 6173761  T
Q  374 aggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  6173762 aggccatggatattccggtgactttaattttatcatatatttttgtaggcatta 6173815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 74 - 427
Target Start/End: Complemental strand, 9986597 - 9986240
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttca--tctttttc 171  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||| ||||||||||||||||| | || | | ||||| | ||| ||||||  | |||||     
T  9986597 ctagttttctctctctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcatccc-tcttcaatttttttta 9986499  T
Q  172 tctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn---ccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    ||||||||||||||||||||||||||||||||| | || ||||          | ||||||||||||||||||||||||||||||||||||||||||| |    
T  9986498 tctctaattcaatctaaataagtgattttcacatagatctaggtttattttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 9986399  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||||||||||||||||||||  | |||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  9986398 tgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaattaaagatttgggcgtcaacgttgcaga 9986299  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    | |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  9986298 ttcggaggccatgggtattccggtcactttaattttatcatatatttttgtaggcatta 9986240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 75 - 427
Target Start/End: Complemental strand, 27249400 - 27249049
Alignment:
Q  75 tagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctct 174  Q
    |||||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||||||   || | | ||||| ||||| |||||||||||||||||    
T  27249400 tagttttctctctctaggttttctcttacaatttcttcattgaagggtggttttgggtcaatacttgacctgaaatcacccc-tcttcatctttttctct 27249302  T
Q  175 ctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcg 274  Q
     || |||||||||||||||||||||||||| | || ||||       | |||| ||||||  |||||||||||||| ||||||||||||||| |||||||    
T  27249301 ttatttcaatctaaataagtgattttcacatagatctaggtttttttctttgtaatttcaagatctaagtgtggtgatttgttgttcgtcgtcttgtgcg 27249202  T
Q  275 gcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgga 374  Q
    ||||||||||||||| | |||| || ||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||| ||    
T  27249201 gcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcagcgttgcagatcctga 27249102  T
Q  375 ggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||| ||| ||||||||||||||||||||| |||||||||||||||| ||||||    
T  27249101 ggcaatggatattccggtcactttaatttcatcatatatttttgtacgcatta 27249049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 65 - 427
Target Start/End: Original strand, 36233827 - 36234191
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||| |||||||| |||| |||| || | |||||||||| ||||||||||||||||| |  | | | ||||| ||||| |||||||    
T  36233827 aagtcggccctagttttctctctctagattttctcttgcaatttcttcattgaggggtggttttgggtcaattcatgacctgaaatcacccc-tcttcat 36233925  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn---ccttgtgatttcatcatctaagtgtggtggtttgttgttc 261  Q
    |||||||||| || |||||||||||||||||||||||||| | || |||           | |||| |||||||||||||||||||||| ||| ||||||    
T  36233926 ctttttctctttatttcaatctaaataagtgattttcacatagatctagattttttttttctttgtaatttcatcatctaagtgtggtgattttttgttc 36234025  T
Q  262 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 361  Q
    ||||| |||||||||||||||||||||| | |||| || ||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  36234026 gtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacg 36234125  T
Q  362 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  36234126 ttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 36234191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 2808729 - 2808370
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||| |||||  | ||||||||||||||| || | |||||||||| ||||||||||||||||| | || | | ||||| ||||| |||||||    
T  2808729 aagtcggccctaattttctttttctaggttttttctttcattttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccc-tcttcat 2808631  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 264  Q
    || |||||||||| |||| ||||||||||||||||||||| | || ||||       | |||||||||||||||||||||||||||||||||||||||||    
T  2808630 ctatttctctctatttcagtctaaataagtgattttcacatagatctaggttttt--ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 2808533  T
Q  265 gtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttg 364  Q
    || |||||||||||||||||||||  | | ||  | || |||| || |||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  2808532 gtcttgtgcggcgttgtttgattttccgtattcttgcgatgttcatctgattcatattgaaagatcgattattcaatcaaagattttggcgtcaacgttg 2808433  T
Q  365 cagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  2808432 cagatccggaagccatggatattccgatcactttaattttatcatatatttttgtaggcatta 2808370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 78 - 427
Target Start/End: Complemental strand, 20047327 - 20046980
Alignment:
Q  78 ttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctcta 177  Q
    ||||| ||||||||||||| |||||| || |||||||||  |||| ||||||| |||| | || | | ||||| ||||  | |||||||||||||||||     
T  20047327 ttttctctctctaggttttctcttaccgtttcttcattggggggtagttttggatcaattcttgacctgaaatcaccc--tattcatctttttctctctt 20047230  T
Q  178 attcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcg 277  Q
     |||||||||||||||||| ||| ||| | || ||||       | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20047229 tttcaatctaaataagtgacttttacatagatttaggtttttttcattgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 20047130  T
Q  278 ttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 377  Q
    ||||||||||||   ||||  ||||||||| |||| |||| |||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  20047129 ttgtttgatttcatgtcttcttacggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacatcaacgttgcagatccggaggc 20047030  T
Q  378 catgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20047029 catgaatattccggtgactttaattttatcatatatttttgtaggcatta 20046980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 78 - 427
Target Start/End: Original strand, 45128040 - 45128387
Alignment:
Q  78 ttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctcta 177  Q
    ||||| ||||||||||||| |||| |  | |||||||||| ||||||||||||||||| | || | | ||||| ||||| ||||||||||||||||| ||    
T  45128040 ttttctctctctaggttttctcttcccatttcttcattga-gggtggttttgggtcaattcttgacctgaaatcacccc-tcttcatctttttctcttta 45128137  T
Q  178 attcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcg 277  Q
     |||||||||||||||||| ||||||| | || ||||       | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45128138 tttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 45128237  T
Q  278 ttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 377  Q
    ||||||| |||||||||||  | ||||||| |||| |||| |||||||| ||| ||||||||||||||||||||  ||| ||||||||||||||||| ||    
T  45128238 ttgtttgctttctcatcttcttgcggtgttcattttattcctattgaaatatcaattattcaatcaaagatttggacgttaacgttgcagatccggaagc 45128337  T
Q  378 catgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| |||||||||| |||||||||||||||||||||||||||| |||||    
T  45128338 catggatattccggtgactttaattttatcatatatttttgtagacatta 45128387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 93 - 427
Target Start/End: Complemental strand, 7015941 - 7015609
Alignment:
Q  93 ttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataa 192  Q
    |||| ||||||| | |||||||||  || |||||||||||||| | || | | ||||| ||||| || | |||||||||||| || ||||||||||||||    
T  7015941 ttttctcttacaatttcttcattgggggttggttttgggtcaattcttgacctgaaatcacccc-tcctaatctttttctctttatttcaatctaaataa 7015843  T
Q  193 gtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctca 292  Q
     ||||||||||| | || ||||       ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |     
T  7015842 ttgattttcacatagatttaggtttttt-ccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccg 7015744  T
Q  293 tcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggt 392  Q
    |||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| | |||||| ||||||| ||    
T  7015743 tcttcgtgcggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaatgccatggatattcccgt 7015644  T
Q  393 cactttaattttatcatatatttttgtaggcatta 427  Q
    | |||||||||||||||||||||||||||||||||    
T  7015643 cgctttaattttatcatatatttttgtaggcatta 7015609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 69 - 402
Target Start/End: Original strand, 30420503 - 30420836
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||| ||| ||||||||||||||| ||||| | |||||||||| |||||||||||| |||| |||| | | ||||| ||||| |||||||||||    
T  30420503 cggccctagtcttctctctctaggtttttttttacaatttcttcattgaggggtggttttggatcaatttttgacctgaaatcacccc-tcttcatcttt 30420601  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgta 267  Q
    |||||| || |||||||||||||||||||||||||| | || ||||        ||| || |||||||||||||||||||||| |||||||||||||||     
T  30420602 ttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtc 30420701  T
Q  268 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcag 367  Q
    |||||||||||||||||||||  | |||| || ||||||| ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  30420702 ttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatagattgttcaatcaaagatttgggcgtcaacgttgcag 30420801  T
Q  368 atccggaggccatgaatattccggtcactttaatt 402  Q
    |||||||||| ||| ||||||| ||||||||||||    
T  30420802 atccggaggcaatggatattccagtcactttaatt 30420836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 69 - 427
Target Start/End: Complemental strand, 21570663 - 21570306
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| |||||||||  |||||||||||| |||| |||  | ||||||||  |||||||||||||||| | || | | ||||| ||||| |||||||||||    
T  21570663 cggccctagttttctgtctctaggttttctcttccagatttttcattgagtggtggttttgggtcaattcttgacctgaaatcacccc-tcttcatcttt 21570565  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgta 267  Q
    |||||| || |||||||||||||||||||||||||| | || |||          || |||||||||||||||||||||||||||||||||||||||||     
T  21570564 ttctctatatttcaatctaaataagtgattttcacatagatctagattttttttttttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 21570465  T
Q  268 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcag 367  Q
    ||||| | ||||||||  |||| | ||||    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||    
T  21570464 ttgtgtgacgttgtttagtttcccgtcttctcgcggtgttcatttgattcatattgaa-gatcgattattcaatcaaagatttgggcgtcaatgttgcag 21570366  T
Q  368 atccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21570365 atccggaggccatgaatattccgttcactttaattttatcatatatttttgtaggcatta 21570306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 92 - 427
Target Start/End: Original strand, 3725030 - 3725363
Alignment:
Q  92 gttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaata 191  Q
    ||||| ||||||| | |||| ||||| ||||||||||||||||| |||| | |  |||| |  || |||||||||||||||||||| |||||| ||||||    
T  3725030 gttttctcttacaatttctttattgaggggtggttttgggtcaatttttgacctaaaatcattcc-tcttcatctttttctctctatttcaatataaata 3725128  T
Q  192 agtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctc 291  Q
    ||||||||||||| | || | |        | ||||||||||||| |||||||||||||||||||||||||| || |||| |||||||||||||||||||    
T  3725129 agtgattttcacatagatcttg-attttttctttgtgatttcatcgtctaagtgtggtggtttgttgttcgttgtcttgtacggcgttgtttgatttctc 3725227  T
Q  292 atcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccgg 391  Q
     |||| ||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||     
T  3725228 gtctttgtgtggtgttcgtttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgtagatccagaggccatagatattccga 3725327  T
Q  392 tcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| ||||||||||||||||||||||    
T  3725328 tcactttaattttttcatatatttttgtaggcatta 3725363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 154 - 427
Target Start/End: Original strand, 4192749 - 4193020
Alignment:
Q  154 cccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtt 253  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||| | || ||||       | ||||||||||||||||||||||||||||||    
T  4192749 cccctcttcatctttttctctatatttcaatctaaataagtgattttcacatatatttaggtttttt-ctttgtgatttcatcatctaagtgtggtggtt 4192847  T
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    ||||||||||||| ||||| || ||||||||||||| | ||||  | | ||||| || |||||||| ||||| ||||||||||||  |||||||||||||    
T  4192848 tgttgttcgtcgtcttgtgtggtgttgtttgatttcccgtcttcttgcagtgttcatctgattcattttgaa-gatcgattattccgtcaaagatttgag 4192946  T
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  4192947 cgtcaacgttgcagatccggaggccatagatattccggtcactttaattttatcatatatttttgtaggcatta 4193020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 154 - 427
Target Start/End: Original strand, 32913152 - 32913423
Alignment:
Q  154 cccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtt 253  Q
    |||||||| ||| |||||||| || |||||| ||||||||||||||||||| | || ||||       | ||||||||||||||||||||||||||||||    
T  32913152 cccctcttgatccttttctctatatttcaatttaaataagtgattttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtt 32913250  T
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    ||||||||||||| |||||||||| ||||||||||  | ||||  ||||||||| || |||||||||||||| ||||||||||||||||||||||||| |    
T  32913251 tgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttacggtgttcatctgattcatattgaa-gatcgattattcaatcaaagatttggg 32913349  T
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||    
T  32913350 cgtcaacgttgcagatccggaggccatggatattacggtcactttaattttatcatatatttttgtatgcatta 32913423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 75 - 414
Target Start/End: Complemental strand, 3270477 - 3270140
Alignment:
Q  75 tagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctct 174  Q
    |||||||  ||||||| ||||| ||||||  | |||||||||| ||||||||||||||||| | || | | ||||| || |  | ||||||||||||| |    
T  3270477 tagttttttctctctaagttttctcttacgatttcttcattgaggggtggttttgggtcaattcttgacctgaaatcactcatt-ttcatctttttcttt 3270379  T
Q  175 ctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcg 274  Q
     || |||||||||||||||||||||||||| | || ||||         |||||||||||||||||||||||||||| |||||||||||||| ||||| |    
T  3270378 ttatttcaatctaaataagtgattttcacatagatctaggtttttttt-ttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggg 3270280  T
Q  275 gcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgga 374  Q
    ||||||||||||||  | |||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3270279 gcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgga 3270180  T
Q  375 ggccatgaatattccggtcactttaattttatcatatatt 414  Q
    || |||| |||||||||||||||||||||||  |||||||    
T  3270179 ggtcatggatattccggtcactttaattttactatatatt 3270140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 158 - 426
Target Start/End: Original strand, 8805781 - 8806048
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    ||||||| ||||||||| || |||||| |||||||||||||||||||   || ||||       | ||||||||||||||||| ||||||||||||||||    
T  8805781 tcttcatatttttctctttatttcaatttaaataagtgattttcacatggatctaggtttttt-ctttgtgatttcatcatctgagtgtggtggtttgtt 8805879  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    ||||||||| ||||||| |||||||||||||| | |||| ||  |||||| ||||||||||||||||||||||||||||||||||||||||||  |||||    
T  8805880 gttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttcatttgattcatattgaaagatcgattattcaatcaaagattttggcgtc 8805979  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    |||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8805980 aacgttgcagattcggaggtcatggatattccggtcactttaattttatcatatatttttgtaggcatt 8806048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 78 - 427
Target Start/End: Complemental strand, 8971874 - 8971526
Alignment:
Q  78 ttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctct- 176  Q
    ||||| |||| |||||||||||||||||| |||||||||| ||||||||||||||||| | || | | ||||| | ||| |||||||||||||||||||     
T  8971874 ttttctctctttaggttttttcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcatccc-tcttcatctttttctctctt 8971776  T
Q  177 -aattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcgg 275  Q
     | || ||||||||||||||||||||||| | || ||||       | ||||||||||||||||||||| ||||||||||||||||||||| |||||| |    
T  8971775 tattttaatctaaataagtgattttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtatggtggtttgttgttcgtcgtcttgtgcag 8971677  T
Q  276 cgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggag 375  Q
    |||||||||||||| |||||| || || |||| |||||||||||| ||||||||| |||| ||||| |||||||||   ||||||||||||||||| ||     
T  8971676 cgttgtttgatttcccatcttcgtgcgatgttcatttgattcataatgaaagatcaatta-tcaattaaagatttggatgtcaacgttgcagatccagat 8971578  T
Q  376 gccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    | |||  ||||||||||||||||||||||||||||||||||||||| |||||    
T  8971577 gtcattgatattccggtcactttaattttatcatatatttttgtagacatta 8971526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 154 - 427
Target Start/End: Original strand, 41430938 - 41431211
Alignment:
Q  154 cccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtt 253  Q
    ||||||||||||||||||||| || |||||||||||||||| | ||| ||| | || ||||       | ||||||||||||||||||||||||||||||    
T  41430938 cccctcttcatctttttctctatatttcaatctaaataagtcacttttacatagatctaggtgtttttctttgtgatttcatcatctaagtgtggtggtt 41431037  T
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    ||||||||||||| ||||||||||||||||| |||| | ||||  | ||||||| |||| ||||  ||||||||||||||||||||||||||||||||      
T  41431038 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattccaattgaaagatcgattattcaatcaaagatttgga 41431137  T
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
     ||||||||||||||||| ||| ||||| |||||||| | ||||||||||||||||||||||||||||||||||    
T  41431138 tgtcaacgttgcagatccagagaccatggatattccgatgactttaattttatcatatatttttgtaggcatta 41431211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 69 - 427
Target Start/End: Complemental strand, 40660183 - 40659830
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| || | ||| |||| ||||| ||| |||||||||| ||||||||||| ||||| | || | | ||||| || |  |||||||||||    
T  40660183 cggccctagttttctctttttagattttctcttagagtttcttcattga-gggtggttttgagtcaattcttgacctgaaatcacaca-tcttcatcttt 40660086  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    |||||| |  |||||||||||||||||||||||||| | || |||        | ||||||||||||||||||||||||||| ||||||||||||||| |    
T  40660085 ttctctat--ttcaatctaaataagtgattttcacatagatctag-attttttctttgtgatttcatcatctaagtgtggtgctttgttgttcgtcgtct 40659989  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||||||||||||||||||||| | |||| || || || | ||||||||| || |||||||||||||||||||||||||||||| |||||||||||| |||    
T  40659988 tgtgcggcgttgtttgatttcccgtcttcgtccgatgctcatttgattcttactgaaagatcgattattcaatcaaagatttgggcgtcaacgttggaga 40659889  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| ||||||||||||||||||||| || || ||||| ||||| |||||    
T  40659888 tccggaggccatggatattccggtcactttaatttcataatttatttctgtagccatta 40659830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 69 - 365
Target Start/End: Original strand, 34598813 - 34599108
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||| ||||| ||||||||||||| |||||| || ||||| |||| |||||||||||| |||| | || | |  |||| | | | |||||||||||    
T  34598813 cggccctaattttctctctctaggttttctcttaccgtttcttcgttgaggggtggttttggatcaattcttgacctcaaatcaactcatcttcatcttt 34598912  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    ||||||||| |||||||||||||||||||||||||| | || |||          |||||||||||||||||||||||||||||||||||||| |||| |    
T  34598913 ttctctctatttcaatctaaataagtgattttcacatagatctagttttttttt-ttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtct 34599011  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgc 365  Q
    ||||||||||||||||||||  |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34599012 tgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgc 34599108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 224 - 414
Target Start/End: Complemental strand, 3269212 - 3269022
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||  | |||| || ||||||| |||||||||||||||    
T  3269212 ttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattg 3269113  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatt 414  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||    
T  3269112 aaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttactatatatt 3269022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 224 - 414
Target Start/End: Complemental strand, 3269771 - 3269581
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||  | |||| || ||||||| |||||||||||||||    
T  3269771 ttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattg 3269672  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatt 414  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||    
T  3269671 aaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttactatatatt 3269581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 137 - 404
Target Start/End: Complemental strand, 26025597 - 26025331
Alignment:
Q  137 tttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatc 236  Q
    |||| ||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||| | || ||||       | |||||||||||||    
T  26025597 ttttgatctgaaatcaccccatcttcatctttttctctctatttcaatctaaataagtggttttcacatagatctaggtttttt-ctttgtgatttcatc 26025499  T
Q  237 atctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattat 336  Q
    || |||||||||| |||||||| ||||||| ||||||||||||||||||||| || ||||  | ||||||| ||||||||||| ||||||||||| ||||    
T  26025498 atgtaagtgtggtagtttgttggtcgtcgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttgaaagatcggttat 26025399  T
Q  337 tcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatttt 404  Q
    ||||||||| ||||| | ||||| ||||||||||||||||| ||||||||||| ||||||||||||||    
T  26025398 tcaatcaaaaatttgggtgtcaatgttgcagatccggaggcgatgaatattccagtcactttaatttt 26025331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 89 - 427
Target Start/End: Complemental strand, 459509 - 459173
Alignment:
Q  89 taggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaa 188  Q
    |||||||| |||| |||| |||||||||| ||||||||||||||||| |||| | | ||||| ||||| |||||||| ||||||||||| |||| | |||    
T  459509 taggttttctcttccagtttcttcattgaggggtggttttgggtcaatttttgacctgaaatcacccc-tcttcatccttttctctctatttcattttaa 459411  T
Q  189 ataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgattt 288  Q
    ||||| |||||||||| | |||||||       | | |||||||| |||||| ||||| ||||| || |||||||||| |||| || |||||||||||||    
T  459410 ataagcgattttcacatagatataggtttttttcttcgtgatttcgtcatctgagtgtcgtggtgtgctgttcgtcgtcttgtacgacgttgtttgattt 459311  T
Q  289 ctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattc 388  Q
      | ||||  | ||||||| ||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||| | |||   ||||     
T  459310 tccgtcttgttgcggtgttcatttgattcatattgaaagatcgattatttaatcaaagatttaggcgtcaacgttgcagatccggatg-cataggtattt 459212  T
Q  389 cggtcactttaattttatcatatatttttgtaggcatta 427  Q
    | |||| |||||||||||||||||||||||||| |||||    
T  459211 cagtcattttaattttatcatatatttttgtagacatta 459173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 228 - 427
Target Start/End: Original strand, 27949410 - 27949609
Alignment:
Q  228 gatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaag 327  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||| | ||||  | || |||| ||||||||||||| |||||    
T  27949410 gatttcatcatctaagtgtggtggtttattgttcgtcgtcttgtacggcgttgtttgatttcccgtcttcttgcgatgttcatttgattcatatcgaaag 27949509  T
Q  328 atcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||| |||||||||||||||||||| |||||||||||||||||||  |||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||    
T  27949510 atcaattattcaatcaaagatttgggcgtcaacgttgcagatccaaaggccatggatattccagtcactttaattttatcatatatttttatagacatta 27949609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 167 - 421
Target Start/End: Original strand, 22421659 - 22421905
Alignment:
Q  167 ttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 266  Q
    ||||||||||| |||||||||||||||||| ||||||| | || ||||       | ||||||||||||||||||||||||||||||||||||||||| |    
T  22421659 ttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcat 22421757  T
Q  267 attgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgca 366  Q
     ||| |||| ||||||||||||| ||||||  | ||||||| ||||||||| |||||||||||||||||||||||||| |||||| ||||||||||| ||    
T  22421758 cttgcgcggtgttgtttgatttcccatcttcttgcggtgttcatttgattcgtattgaaagatcgattattcaatcaatgatttgggcgtcaacgttaca 22421857  T
Q  367 gatccggaggccatgaatattccggtcactttaattttatcatatatttttgtag 421  Q
    |||||||||       ||||||||||||||||| |||||||||||||||||||||    
T  22421858 gatccggag-------atattccggtcactttagttttatcatatatttttgtag 22421905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 69 - 428
Target Start/End: Original strand, 25086862 - 25087220
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    ||||||||||||||  |||||||||||| |||| | || |||||||| | ||||||||||||||||| | || | | ||||| ||||| |||||||||||    
T  25086862 cggctctagttttc--tctctaggttttctcttccggtttcttcatttaggggtggttttgggtcaattattgacctgaaatcacccc-tcttcatcttt 25086958  T
Q  169 ttctctctaattcaatctaaataagtga----ttttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 264  Q
    |||  |||| || |||||| ||||||||    |||||||| | || ||||         || ||||||||||||||||||||||||||||||||||||||    
T  25086959 ttccatctatttgaatctatataagtgagtgattttcacatagatctaggttttttatttt-tgatttcatcatctaagtgtggtggtttgttgttcgtc 25087057  T
Q  265 gtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttg 364  Q
    || ||||||| ||||||||| |||| | ||||  | | ||||| | || ||||||||| ||||||||||||||||||||| ||||||  |||||||||||    
T  25087058 gtcttgtgcgacgttgtttgctttcccttcttcttgcagtgttcaatttattcatattaaaagatcgattattcaatcaatgatttggacgtcaacgttg 25087157  T
Q  365 cagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcattaa 428  Q
    ||||| | || |||||| ||||||| ||||||||||| |||||||||| |||||||||||||||    
T  25087158 cagattcagaagccatggatattccagtcactttaatcttatcatata-ttttgtaggcattaa 25087220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 154 - 427
Target Start/End: Original strand, 27477065 - 27477331
Alignment:
Q  154 cccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtt 253  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||||||| | || |||        | |||||||||||||||||      |||||||    
T  27477065 cccctcttcatctttttctctatatttcaatctaaataagtaattttcacatagatctag-attttttctttgtgatttcatcatct------ggtggtt 27477157  T
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagta-cggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttga 352  Q
    ||||||| || || |||||||||| ||||||||||  | ||||  |  ||||||| ||||||||||||||||| |||||||||||||||||||||||||     
T  27477158 tgttgtttgtagtcttgtgcggcgctgtttgattttccgtcttctttgcggtgttcatttgattcatattgaa-gatcgattattcaatcaaagatttgg 27477256  T
Q  353 gcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    || ||||||||||||||| | || ||||  ||||| |||||||||||||||||||||||||||||||||||||||    
T  27477257 gcatcaacgttgcagatcggaagaccatagatatttcggtcactttaattttatcatatatttttgtaggcatta 27477331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 224 - 427
Target Start/End: Original strand, 4228113 - 4228306
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||  | |||| || ||||||| |||||||||          
T  4228113 ttgtgatttcatcatctaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattc------ 4228206  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaa-ttttatcatatatttttgtagg 422  Q
      |||||||||||||||||||||||||    | |||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||||||||    
T  4228207 --agatcgattattcaatcaaagattt---aggcaacgttgcagatccggaggtcatggatattccgatcactttaatttttatcatatatttttgtagg 4228301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 278 - 427
Target Start/End: Complemental strand, 84227 - 84079
Alignment:
Q  278 ttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 377  Q
    |||||||||||| | |||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |     
T  84227 ttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa-atcgattattcaatcaaagatttggacgtcaacgttgcagatccggatgt 84129  T
Q  378 catgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| ||||||||| |||||||||||||||||||||||| ||||||||||    
T  84128 catggatattccggccactttaattttatcatatattttcgtaggcatta 84079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 262 - 427
Target Start/End: Complemental strand, 32679173 - 32679008
Alignment:
Q  262 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 361  Q
    ||||| ||||| ||||||||||| ||||   ||||  | || |||| |||| |||| |||||||||||||||||||||||||||||||||  ||||||||    
T  32679173 gtcgtcttgtgtggcgttgtttgctttcctgtcttcttgcgatgttcattttattcttattgaaagatcgattattcaatcaaagatttggacgtcaacg 32679074  T
Q  362 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  32679073 ttgcagatccggaggccatagatattccggtgactttaattttatcatatatttttgtaggcatta 32679008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 40626072 - 40625955
Alignment:
Q  310 tttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcat 409  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||  |    
T  40626072 tttgattcatattgaaagatcgattattcaatcaaagatttgatcgtcaacgttgcagatccggcggccatggatattccggtcactttaattttatgtt 40625973  T
Q  410 atatttttgtaggcatta 427  Q
    || |||||||||||||||    
T  40625972 atgtttttgtaggcatta 40625955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 227 - 427
Target Start/End: Original strand, 17319305 - 17319503
Alignment:
Q  227 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 326  Q
    ||||||| |||||| ||||||||||| |||||||| |||| |||||| |||||||| |||||  | ||||  | ||||||| |||||| ||||||||||     
T  17319305 tgatttcgtcatctgagtgtggtggtgtgttgttcttcgtcttgtgcagcgttgtt-gattttccgtcttgttgcggtgttcatttgactcatattgaa- 17319402  T
Q  327 gatcgattattcaatcaaa-gatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 425  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | || |||  |||||||||||||||||||||||||||||||| | |||||||    
T  17319403 gatcgattattcaatcaaaagatttgagcgtcaacgttgcagatccgaaagc-atgggtattccggtcactttaattttatcatatatttgtataggcat 17319501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 242 - 427
Target Start/End: Complemental strand, 37614208 - 37614024
Alignment:
Q  242 agtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaat 341  Q
    ||||||||| | |||||||| |||| ||||||| |||||||||||||  | ||||  | ||||||| ||||||||||||||||||||| |||||||||||    
T  37614208 agtgtggtgatgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagattgattattcaat 37614109  T
Q  342 caaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||| ||||  | |||||||||||||||| ||| | ||||| ||||||  ||||||||||||||||||||||||||||| ||||||    
T  37614108 caaatatttttgtgtcaacgttgcagatcggga-gacatgagtattccaatcactttaattttatcatatatttttgtatgcatta 37614024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 158 - 418
Target Start/End: Complemental strand, 39642026 - 39641766
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgt 256  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||||| | || ||||        ||| ||||||||||||||| | ||| |||||   |    
T  39642026 tcttcatctttttctctctatttcaatttaaataaatgattttcacatagatctaggttttttttcttcgtgatttcatcatctgaatgttgtggtagtt 39641927  T
Q  257 tgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgt 356  Q
    |||||||| | ||||||| | |||||||||||| | ||||  | |||| || |||| ||||||||||||||||| ||||||||||| || ||||| || |    
T  39641926 tgttcgtcatcttgtgcgtcattgtttgatttcccgtcttgttgcggtattcatttaattcatattgaaagatcaattattcaatccaaaatttgggcat 39641827  T
Q  357 caacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttg 418  Q
    |||||||||||||||||||| || || |||| | |||||||| |||||||||||||||||||    
T  39641826 caacgttgcagatccggagg-cacgagtatttcagtcacttttattttatcatatatttttg 39641766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 228 - 350
Target Start/End: Complemental strand, 31580686 - 31580564
Alignment:
Q  228 gatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaag 327  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | | || || ||||||| |||||||| ||||||||||    
T  31580686 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttttatttcccgtattcgtgcggtgttcatttgatttatattgaaag 31580587  T
Q  328 atcgattattcaatcaaagattt 350  Q
    |||||||||| ||||||||||||    
T  31580586 atcgattattaaatcaaagattt 31580564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 33229130 - 33229038
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  33229130 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccagtcactttaattttatcatatatttttgtaggcatta 33229038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 41712785 - 41712687
Alignment:
Q  328 atcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  41712785 atcgattattca-tcaaagatttgagcgtcaacgttgcagatacggaggccatgaatattccggtcattttaattttatcatatatttttgtaggtatta 41712687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 329 - 427
Target Start/End: Complemental strand, 38575481 - 38575383
Alignment:
Q  329 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  38575481 tcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 38575383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 67 - 287
Target Start/End: Complemental strand, 40626284 - 40626066
Alignment:
Q  67 gtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatct 166  Q
    |||||| ||||||||| |||| |||||||| |||| || | |||| ||||| ||||| ||||||||| | | || | | ||||| ||||| ||||| |||    
T  40626284 gtcggccctagttttctctctttaggttttctcttccattttcttaattgaggggtgattttgggtctattcttgacctgaaatcacccc-tcttcgtct 40626186  T
Q  167 ttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 266  Q
    ||||||||||| ||||||||||||||| |||||||||| | || || |       | |||||||||||||||||||||||||||||||||||||||||||    
T  40626185 ttttctctctatttcaatctaaataagggattttcacatagatctacgtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 40626087  T
Q  267 attgtgcggcgttgtttgatt 287  Q
     |||||||| |||||||||||    
T  40626086 cttgtgcggtgttgtttgatt 40626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 254 - 417
Target Start/End: Original strand, 8308181 - 8308342
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    ||||||||||||| |||||| ||||||||||||||||  | ||  | | || || ||||||||||||||||||||||||||||||||||||||| |||      
T  8308181 tgttgttcgtcgtcttgtgcagcgttgtttgatttctg-tattgttgcagttttcatttgattcatattgaaagatcgattattcaatcaaagaattgga 8308279  T
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatattttt 417  Q
    ||||||||||||||||||||| | ||| | ||||||  ||||||||| ||||||||||||||||    
T  8308280 cgtcaacgttgcagatccggatg-cataactattccaatcactttaactttatcatatattttt 8308342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 74 - 266
Target Start/End: Complemental strand, 41713015 - 41712824
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||| || |||||||||| ||||||| | |||||||||| |||||||||||||| || | || |   ||||| ||||  | |||||| |||||||    
T  41713015 ctagttttctctatctaggttttctcttacaatttcttcattgaggggtggttttgggttaattcttgacgtgaaatcacccatt-ttcatcattttctc 41712917  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 266  Q
    |||| || ||||||||||||||||||||||| | || ||||       |  ||||||||| ||||||||||||||||||||||||||||||||    
T  41712916 tctattttaatctaaataagtgattttcacatagatttaggtttttttctctgtgatttcctcatctaagtgtggtggtttgttgttcgtcgt 41712824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 158 - 406
Target Start/End: Complemental strand, 32197961 - 32197715
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    ||||||||||||||||| || |||||| ||||||| |||||||  || |||| ||||       | |||||||||| ||||||||||||||| || ||||    
T  32197961 tcttcatctttttctctttatttcaatataaataaatgatttttgcataaatttaggtttttt-ctttgtgatttcgtcatctaagtgtggtagtgtgtt 32197863  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    |  | |||| ||| ||||| ||||||||||||   ||||  | ||||||| |||||||||||||| ||| || || |||| ||||||| ||||| |||||    
T  32197862 gcccatcgtcttgcgcggcattgtttgatttcctgtcttgttgcggtgttcatttgattcatattaaaatattgactatttaatcaaatatttgggcgtc 32197763  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttat 406  Q
    || |||||||||||||| | ||||  ||||| ||||||| |||||||||    
T  32197762 aatgttgcagatccggatg-catggttattctggtcactctaattttat 32197715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 34600332 - 34600397
Alignment:
Q  362 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34600332 ttgcagattcggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 34600397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 266
Target Start/End: Complemental strand, 32680749 - 32680640
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgt 256  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| | || ||||        ||| |||||||||||||||||||||||||||||||    
T  32680749 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgt 32680650  T
Q  257 tgttcgtcgt 266  Q
    ||||||||||    
T  32680649 tgttcgtcgt 32680640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 350
Target Start/End: Complemental strand, 9374655 - 9374531
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    |||||||| |||||| | ||||||||| ||||||||||| | ||||||| | ||||||| |||  | ||||  |  |||||| ||||||||||| |||||    
T  9374655 gtgatttcgtcatcttattgtggtggtgtgttgttcgtcatcttgtgcgtcattgtttgtttttccgtcttgttgtggtgttcatttgattcattttgaa 9374556  T
Q  326 agatcgattattcaatcaaagattt 350  Q
    ||| |||||||||||||||||||||    
T  9374555 agaacgattattcaatcaaagattt 9374531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 12648052 - 12647982
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 296  Q
    ||||||||||| |||||||| |||| | ||||||||||||| |||||||||||||||||||||||| ||||    
T  12648052 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtctt 12647982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 31581888 - 31581840
Alignment:
Q  156 cctcttcatctttttctctctaattcaatctaaataagtgattttcaca 204  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31581888 cctcttcatctttttctctctatttcaatctaaataagtgattttcaca 31581840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 38293559 - 38293679
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    ||||||||||||| ||||| | ||||||||||| || | ||||| | |  |||| ||||| || ||||| |||||| |||| ||||||||| |||| |||    
T  38293559 tgttgttcgtcgtcttgtgtgacgttgtttgatatcccgtcttattgcaatgttcatttggtttatattaaaagattgattgttcaatcaatgattcgag 38293658  T
Q  354 cgtcaacgttgcagatccgga 374  Q
    ||||||||||| |||||||||    
T  38293659 cgtcaacgttgtagatccgga 38293679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 33229243 - 33229129
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||| | ||||||||||||| |||||| || |||||||||||||||||||||||||||| | || | |  |||| | || ||||||||||||    
T  33229243 cggccctagtttcctctctctaggttttctcttactgtttcttcattgaagggtggttttgggtcaattattgagctaaaatca-cctctcttcatcttt 33229145  T
Q  169 ttctctctaattcaat 184  Q
    || |||||| ||||||    
T  33229144 ttttctctatttcaat 33229129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 411
Target Start/End: Complemental strand, 44881813 - 44881657
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    ||||||||||| | ||||||||| || ||| |||| |  ||||  |||  |||| |||||||||||||| ||||||   ||||||||||||  |||||      
T  44881813 tgttgttcgtcatcttgtgcggcattattttattttttgtcttcttacaatgttcatttgattcatattaaaagattagttattcaatcaataatttgca 44881714  T
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    | | ||| |||||||||||||| | |||| |||| |||||||||||||||||||||||    
T  44881713 cattaacattgcagatccggagac-atgagtatttcggtcactttaattttatcatat 44881657  T

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Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 6358977 - 6358899
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatct--tagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| |||||| ||||||||||||||| |||||  | ||||||||||| |||| ||| ||||||||||||    
T  6358977 tgttgttcgtcgtcttgtgcagcgttgtttgatttcgcatcttgttgtacggtgtttgtttggttcttattgaaagatc 6358899  T

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Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 371
Target Start/End: Original strand, 18113893 - 18113996
Alignment:
Q  268 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcag 367  Q
    |||||||||||||||||||||  | ||||| | ||||||| || || |||||||||||| |||  ||||||||| || ||||||   |||||||||||||    
T  18113893 ttgtgcggcgttgtttgattttccgtcttattgcggtgttaatatggttcatattgaaatatcagttattcaataaatgatttggatgtcaacgttgcag 18113992  T
Q  368 atcc 371  Q
    ||||    
T  18113993 atcc 18113996  T

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Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 29574732 - 29574657
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||||| ||||||||| |||||||||||| ||| ||  | | |||||| ||||||||||||||||||||    
T  29574732 tgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatattgaaagat 29574657  T

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Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 331
Target Start/End: Original strand, 18763437 - 18763541
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    ||||||||||||| |||||||| |||| | ||||||||||||| |||||||||   |||||||||| | |||||  ||||||||  |||  ||| |||||    
T  18763437 ttgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttatcacggtgttcgtttagttcctattg 18763533  T
Q  324 aaagatcg 331  Q
    ||||||||    
T  18763534 aaagatcg 18763541  T

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Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 45694407 - 45694363
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    |||||||||||||||||||||||||||||| |||| |||||||||    
T  45694407 atttctcatcttagtacggtgtttatttgactcatgttgaaagat 45694363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 31581942 - 31581891
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaa 135  Q
    ||||||||||||| |||||| || |||||||||| |||||||||||||||||    
T  31581942 ctctctaggttttctcttactgtttcttcattgaggggtggttttgggtcaa 31581891  T

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Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 39310983 - 39310928
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    ||||||||||||||||||||||||||| | |||||||| |||| |||||| |||||    
T  39310983 ttgtgatttcatcatctaagtgtggtgttgtgttgttcttcgtcttgtgcagcgtt 39310928  T

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Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 42949624 - 42949675
Alignment:
Q  154 cccctcttcatcttttt-ctctctaattcaatctaaataagtgattttcaca 204  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  42949624 cccctcttcatcttttttctctttatttcaatctaaataagtgattttcaca 42949675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 14423321 - 14423399
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcga 332  Q
    |||| |||||||| ||||||  |||||||||||||| ||| ||| | |||||||| |||| ||| ||||||||||||||    
T  14423321 tgttattcgtcgtcttgtgcatcgttgtttgatttcacattttattgcggtgtttgtttggttcttattgaaagatcga 14423399  T

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Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 411
Target Start/End: Original strand, 18695147 - 18695220
Alignment:
Q  337 tcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    |||||||| ||||||  |||||||||||||||||  ||| ||||||||||| ||  |||||||||||||||||||    
T  18695147 tcaatcaatgatttggtcgtcaacgttgcagatctagag-ccatgaatatttcgaccactttaattttatcatat 18695220  T

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Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 427
Target Start/End: Complemental strand, 9374514 - 9374465
Alignment:
Q  378 catgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||| |||||| | ||||||||||||||||| |||||||||||||||||    
T  9374514 catgagtattccagacactttaattttatcatgtatttttgtaggcatta 9374465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 408
Target Start/End: Original strand, 3240946 - 3241049
Alignment:
Q  304 tgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattt 403  Q
    |||| ||||| ||||| |||||| | |  |||||||||||| ||||||  |||||| |||||||||  || ||| ||||||||||  |||||||||||||    
T  3240946 tgttcatttggttcatgttgaaataccagttattcaatcaatgatttggacgtcaatgttgcagattagg-ggcaatgaatattcttgtcactttaattt 3241044  T
Q  404 tatca 408  Q
    |||||    
T  3241045 tatca 3241049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 5754444 - 5754492
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| ||||||| ||||||||||||||||||  |||||||||    
T  5754444 tttgatttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 5754492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 14955620 - 14955656
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    |||||||||| ||||||||||||||||||||||||||    
T  14955620 attcaatcaatgatttgagcgtcaacgttgcagatcc 14955656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 36868164 - 36868212
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| ||||||| ||||||||||||||||||  |||||||||    
T  36868164 tttgatttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 36868212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 200
Target Start/End: Original strand, 18694961 - 18695004
Alignment:
Q  158 tcttcatctttt-tctctctaattcaatctaaataagtgatttt 200  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  18694961 tcttcatcttttttctctctatttcaatctaaataagtgatttt 18695004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 410
Target Start/End: Complemental strand, 19028923 - 19028849
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcata 410  Q
    |||||||||| ||||||||||||||||||||| |||| || | |||| ||||| |||| ||||  |||||||||||    
T  19028923 attcaatcaatgatttgagcgtcaacgttgcaaatccagaag-catggatatttcggtaacttagattttatcata 19028849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 29279579 - 29279490
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    |||||||||| |||||| ||||||| ||||||||||||||   ||||| | || |||| |||| ||||||||||||| | ||||||||||||    
T  29279579 attcaatcaatgatttgtgcgtcaatgttgcagatccgga-aacatgagtttttcggtgacttaaattttatcatat-tatttgtaggcatt 29279490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 31128789 - 31128700
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    |||||||||| |||||  |||||||||||||||||||||| | ||||| |||| | || ||||  |||||||||||| | ||||||||||||    
T  31128789 attcaatcaatgatttaggcgtcaacgttgcagatccggaag-catgagtatttcagtgacttatattttatcatat-tatttgtaggcatt 31128700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 328
Target Start/End: Original strand, 36080683 - 36080726
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaaga 328  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||    
T  36080683 atttctcgtcttaatacggtgtttatttgattcaaattgaaaga 36080726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 411
Target Start/End: Original strand, 13141550 - 13141651
Alignment:
Q  309 atttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatca 408  Q
    ||||| ||| |||| ||||||||| ||||| ||||| ||||||  ||||||||||| |||| | || | |||||||||||| | |||||| | |||||||    
T  13141550 atttggttcctatttaaagatcgactattcgatcaatgatttggacgtcaacgttgtagattctgaag-catgaatattccagccacttttagtttatca 13141648  T
Q  409 tat 411  Q
    |||    
T  13141649 tat 13141651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 344
Target Start/End: Original strand, 17261606 - 17261636
Alignment:
Q  314 attcatattgaaagatcgattattcaatcaa 344  Q
    |||||||||||||||||||||||||||||||    
T  17261606 attcatattgaaagatcgattattcaatcaa 17261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 28534058 - 28533984
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 328  Q
    ||||||||| ||| ||||||| ||||||||||||||  |||||  | |||||||  |||||||| ||||||||||    
T  28534058 tgttgttcgccgtcttgtgcgacgttgtttgatttcaaatcttgttgcggtgttcgtttgattcctattgaaaga 28533984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 410
Target Start/End: Original strand, 36323915 - 36324019
Alignment:
Q  304 tgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattt 403  Q
    |||| ||||| ||| ||||||||||||  |||||||||||| | ||||  ||||||||||||||||| | |||  |||| |||||| | || ||||||||    
T  36323915 tgttcatttggttcctattgaaagatctgttattcaatcaatggtttggacgtcaacgttgcagatctg-agga-atgagtattccagacattttaattt 36324012  T
Q  404 tatcata 410  Q
    |||||||    
T  36324013 tatcata 36324019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 296
Target Start/End: Original strand, 37416706 - 37416748
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 296  Q
    ||||||||||||| ||||||| |||||||||||||| ||||||    
T  37416706 tgttgttcgtcgtcttgtgcgacgttgtttgatttcacatctt 37416748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 4264472 - 4264544
Alignment:
Q  255 gttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    |||||||||||| ||||||||   ||||||||||| | ||||| | ||||||| ||||| ||| ||||||||||||    
T  4264472 gttgttcgtcgtcttgtgcgg---tgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaagatc 4264544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 372
Target Start/End: Complemental strand, 30400044 - 30400007
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccg 372  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  30400044 attcaatcaatgatttgggcgtcaacgttgcagatccg 30400007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 34124521 - 34124566
Alignment:
Q  304 tgtttatttgattcatattgaaagatcgattattcaatcaaagatt 349  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||    
T  34124521 tgttaatttgattcatatgaaaagatcgattattcaatcaatgatt 34124566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 427
Target Start/End: Complemental strand, 36943119 - 36943040
Alignment:
Q  346 gatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||| ||||||||||||||||||||||   ||||  |||| |||| |||| ||||||||||||| | |||||||||||||    
T  36943119 gatttgggcgtcaacgttgcagatccgga-aacatgggtatttcggtgacttgaattttatcatat-tatttgtaggcatta 36943040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 4426623 - 4426575
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  4426623 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 4426575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 4732226 - 4732274
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  4732226 tttgatttcccgtcttagtgcggtgtttatttgattcaagttgaaagat 4732274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 426
Target Start/End: Original strand, 7646588 - 7646658
Alignment:
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    ||||||||||||||||||||| | ||||| |||| |||| |||| | ||||||||||| | ||||||||||||    
T  7646588 cgtcaacgttgcagatccggaag-catgagtatttcggtgacttaagttttatcatat-tatttgtaggcatt 7646658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 9978634 - 9978586
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  9978634 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 9978586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 12891083 - 12891035
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| || |||| ||||||||||||||||||  |||||||||    
T  12891083 tttgatttctcgtcctagtgcggtgtttatttgattcaggttgaaagat 12891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 17249250 - 17249175
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| ||||||||||| |||| ||||  ||||||  | ||||||||  ||| ||||||||||||||||    
T  17249250 tgttgttcgtcgtcttgtgcggcgtagttttatttggcatcttgttgcggtgttt-gttggttcatattgaaagatc 17249175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 20561093 - 20561049
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||| ||||||||| ||||||||||||||||||  |||||||||    
T  20561093 atttcccatcttagtgcggtgtttatttgattcaggttgaaagat 20561049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 27949339 - 27949383
Alignment:
Q  160 ttcatctttttctctctaattcaatctaaataagtgattttcaca 204  Q
    |||||| ||||| ||||  ||||||||||||||||||||||||||    
T  27949339 ttcatccttttcgctctgtttcaatctaaataagtgattttcaca 27949383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 32448722 - 32448647
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| ||||||| |||||||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  32448722 tgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatc 32448647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 34963041 - 34962993
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  34963041 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 34962993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 43474093 - 43474045
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  43474093 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 43474045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 158 - 427
Target Start/End: Original strand, 28035053 - 28035322
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| | || ||||       | ||||||||||||||||||||||||||||||||||    
T  28035053 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgtt 28035152  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    ||||||||| |||||||||||||||||||||| | |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28035153 gttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtc 28035252  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28035253 aacattgcagatccggaggccatgaatattccggtcactttaattttatcataaatttttgtaggcatta 28035322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 92 - 427
Target Start/End: Complemental strand, 50272372 - 50272038
Alignment:
Q  92 gttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaata 191  Q
    ||||| ||||||| | |||||||||||||||||||||||||||| | || | | ||||| ||||| | ||||||||||||||| || |||||||||||||    
T  50272372 gttttctcttacaatttcttcattgaagggtggttttgggtcaattcttgacctgaaatcacccc-tattcatctttttctctttatttcaatctaaata 50272274  T
Q  192 agtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctc 291  Q
    ||| ||||||||| | || || |       | ||||||||||||| ||||||| ||||| ||||||||||||||| |||||||||||||||||||||| |    
T  50272273 agtaattttcacatagatctaagtttttttctttgtgatttcatcttctaagtttggtgatttgttgttcgtcgttttgtgcggcgttgtttgatttccc 50272174  T
Q  292 atcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccgg 391  Q
     |||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |    
T  50272173 gtcttcgtgcggtgttcatttgattcatattgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccag 50272074  T
Q  392 tcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| ||||||||||||||||||||||    
T  50272073 tcactttaattttgtcatatatttttgtaggcatta 50272038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 84 - 427
Target Start/End: Complemental strand, 45426303 - 45425964
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaaggg-tggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattca 182  Q
    ||||||||||||| | || |||| |||||||||| ||| |||||||||||||| | || ||  ||||| |||   | |||||||||||||||||| || |    
T  45426303 ctctctaggttttcttttccagtttcttcattgagggggtggttttgggtcaattcttgatttgaaatcacctatt-ttcatctttttctctctatttaa 45426205  T
Q  183 atctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtt 282  Q
    |||||||||||||||||||||| | || || |         ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45426204 atctaaataagtgattttcacatagatctaagttttt----ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtt 45426109  T
Q  283 tgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatga 382  Q
    ||||||| |||| | || ||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  45426108 tgatttcccatcatcgtgcggtgttcatttgattcatatcgaaagatcgattattcaatcaaaaatttgagcgtcaacgttgcagatccgaaggccatga 45426009  T
Q  383 atattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  45426008 atatttcggtcactttaattttatcatatatttttgtaggcatta 45425964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 78 - 427
Target Start/End: Complemental strand, 51868891 - 51868543
Alignment:
Q  78 ttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctcta 177  Q
    ||||| |||| |||||||| |||| | || |||||||||  |||||||||||||| || | || | | ||||| ||||| ||||||||||||||||||||    
T  51868891 ttttctctctttaggttttctcttcccgtttcttcattggggggtggttttgggttaattcttgacctgaaatcacccc-tcttcatctttttctctcta 51868793  T
Q  178 attcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcg 277  Q
     |||||||||||||||||| ||||||| | || ||||       | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51868792 tttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 51868693  T
Q  278 ttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 377  Q
    ||||||| |||||| ||||  | ||||||| |||| |||| |||||||||||||||||||||||||||||||||  ||||||||||||||||| |||| |    
T  51868692 ttgtttgctttctcgtcttcttgcggtgttcattttattcttattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatctggagac 51868593  T
Q  378 catgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  51868592 catgaatattccgatgactttaattttatcatatatttttgtaggcatta 51868543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 19716155 - 19715793
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||| |||| |||||||||||||||| | ||||||||||  |||||||||||||||| | || ||| ||||| ||||  |||||||    
T  19716155 aagtcggccctagttttctctctttaggttttttcttacaatttcttcattgagaggtggttttgggtcaattcttgatctgaaatcaccc--tcttcat 19716058  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn---ccttgtgatttcatcatctaagtgtggtggtttgttgttc 261  Q
    |||||||||| || |||||||||||||||||||||||||| | || ||||          | |||| |||||||||||||||||||||| || |||||||    
T  19716057 ctttttctctttatttcaatctaaataagtgattttcacatagatttaggttttttttttcattgtaatttcatcatctaagtgtggtgatt-gttgttc 19715959  T
Q  262 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 361  Q
    ||||| |||||| ||||||||||||||| | |||| || ||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||||||    
T  19715958 gtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttaaatcaaagatttgggcgtcaacg 19715859  T
Q  362 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||  ||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  19715858 ttgcagatctagaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 19715793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 33291678 - 33291316
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| |||||||||  ||||||| |||||||||| ||| | |||||||| ||||||||||||||||| | || | | ||||| ||||| |||||||    
T  33291678 aagtcggccctagttttctttctctagattttttcttatagttttttcattgaggggtggttttgggtcaattcttgacctgaaatcacccc-tcttcat 33291580  T
Q  165 cttttt-ctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgt 263  Q
     ||||| || |||| |||||| ||||||||||||||||||| |||| || |       | ||||||||||||||||||||||||||||||||||||||||    
T  33291579 tttttttctttctatttcaatataaataagtgattttcacataaatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 33291480  T
Q  264 cgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgtt 363  Q
    ||| |||||||| ||||||||||||  | || | || ||||||| |||||||||||||||||||||   | ||||||||||||||||| |||||||||||    
T  33291479 cgtcttgtgcggtgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaaagataagtaattcaatcaaagatttgggcgtcaacgtt 33291380  T
Q  364 gcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33291379 gcagattcggaggcgatggatattccggtcactttaattttatcatatatttttgtaggcatta 33291316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 65 - 427
Target Start/End: Original strand, 51871687 - 51872046
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||| ||||| ||||||||||||| ||||   || |||||||||  ||||||||||||||||| | || | |  |||| ||||| |||||||    
T  51871687 aagtcggccctaattttctctctctaggttttctcttctcgtttcttcattgg-gggtggttttgggtcaattcttgacctaaaatcacccc-tcttcat 51871784  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 264  Q
    ||||||||||||| |||||||||||||||||| ||||||| | || |||        | |||||||||||||||||||||||||||||||||||||||||    
T  51871785 ctttttctctctatttcaatctaaataagtgactttcacatagatctag-cttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 51871883  T
Q  265 gtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttg 364  Q
    || ||||||| ||||||||| |||  | ||||  | ||||||| |||| |||| ||||||||||||||||||||||||||| |||||| |||||||||||    
T  51871884 gtcttgtgcgacgttgtttgcttttccgtcttcttgcggtgttcattttattcttattgaaagatcgattattcaatcaaatatttgaacgtcaacgttg 51871983  T
Q  365 cagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  51871984 cagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggcatta 51872046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 5324816 - 5324456
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    ||||| || ||| ||||| |||||||| |||| ||||  ||| |||||||||| || || ||||||||||| | || | | | ||| ||| | |||||||    
T  5324816 aagtcagccctaattttctctctctagattttctcttcaagtttcttcattgagggatgattttgggtcaattcttgacctggaatcacctc-tcttcat 5324718  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 264  Q
    ||||||||||||| |||||||||||||||||||||||||  |||| || |       | ||||||||||||||||||||||||||||||||||||||| |    
T  5324717 ctttttctctctatttcaatctaaataagtgattttcacgtaaatttaagtttttc-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgcc 5324619  T
Q  265 gtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttg 364  Q
    || ||||||||  |||||||||||| | ||||  | ||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  5324618 gtcttgtgcggtattgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaaaatcgattattcaatcaaagatttgggcgtcaacgttg 5324519  T
Q  365 cagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  5324518 cagatccgggggccatggatatttcggtcactttaattttatcatatatttttgtaggcatta 5324456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 84 - 427
Target Start/End: Complemental strand, 40881253 - 40880911
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    ||||||||||||| |||||| || |||||||||| || |||||||||||||| | || | |  |||| || |  |||||||||||||||||||| |||||    
T  40881253 ctctctaggttttctcttaccgtttcttcattgagggatggttttgggtcaattcttgacctaaaatcactca-tcttcatctttttctctctatttcaa 40881155  T
Q  184 tctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtt 282  Q
    ||||||| ||||||||||||  | || ||||         || | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40881154 tctaaatgagtgattttcacttagatctaggttttttttttttgagatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtt 40881055  T
Q  283 tgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatga 382  Q
    ||||||| | |||| || ||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||     
T  40881054 tgatttcccgtcttcgtgcggtgttcatttgattcatattaaaa-atcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaaggccatgg 40880956  T
Q  383 atattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  40880955 atattctggtcactttaattttatcatatatttttgtaggcatta 40880911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 78 - 427
Target Start/End: Complemental strand, 50166344 - 50165997
Alignment:
Q  78 ttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctcta 177  Q
    ||||| ||||||||||||| |||| | || |||||||||  ||||||||||||||||| | || | | |||||| |||| |||| |||||||||| ||||    
T  50166344 ttttctctctctaggttttctcttcccgtttcttcattgg-gggtggttttgggtcaattattgacctgaaattgcccc-tctttatctttttctatcta 50166247  T
Q  178 attcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcg 277  Q
     |||||||||||||||||| ||||||| | || ||||       |  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50166246 tttcaatctaaataagtgaatttcacatagatttaggtttttttctatgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 50166147  T
Q  278 ttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 377  Q
    || |||| |||||| ||||  | ||||||| |||| |||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  50166146 ttatttgctttctcgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgtagatccggaggc 50166047  T
Q  378 catgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||  ||||| ||| ||||||||||||||||||||||||||||||||||    
T  50166046 catgggtattctggtgactttaattttatcatatatttttgtaggcatta 50165997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 224 - 427
Target Start/End: Complemental strand, 9687305 - 9687103
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||  | ||||||| |||||||||||||||    
T  9687305 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttcatttgattcatattg 9687206  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 423  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9687205 aaagatcgattattcaatcaaagatttgggcgtcaa-gttgcagatccagaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 9687107  T
Q  424 atta 427  Q
    ||||    
T  9687106 atta 9687103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 119 - 427
Target Start/End: Original strand, 7997663 - 7997972
Alignment:
Q  119 gggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnn 218  Q
    |||||||||||||| || |||| ||| ||||| ||||  ||||||||||||||||| || |||||| ||||||||||||||||||| | || ||||        
T  7997663 gggtggttttgggttaatttttgatctgaaatcaccct-tcttcatctttttctctttatttcaatataaataagtgattttcacatagatctaggtttt 7997761  T
Q  219 nnn--ccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgatt 316  Q
         | |||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||| || | ||||| ||||||||    
T  7997762 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcagtgttcatttgatt 7997861  T
Q  317 catattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttt 416  Q
    |||||||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  7997862 catattgaaatatcgattgttcaaccaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccggtcactttaatttcatcatatatttt 7997961  T
Q  417 tgtaggcatta 427  Q
    |||||||||||    
T  7997962 tgtaggcatta 7997972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 35584880 - 35584516
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    ||||| || |||||||||  |||||||||||| ||||||| | |||||||||| ||||| ||||||||||| | || | | ||||| || |  |||||||    
T  35584880 aagtccgccctagttttctttctctaggttttctcttacaatttcttcattgaggggtgattttgggtcaattcttaacctgaaatcactca-tcttcat 35584782  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn---ccttgtgatttcatcatctaagtgtggtggtttgttgttc 261  Q
    |||||||||| || |||||||||||||||||||||||||| | || ||||          | |||| |||| || |||||||||||||| ||||||||||    
T  35584781 ctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttttctttgtaattttataatctaagtgtggtgatttgttgttc 35584682  T
Q  262 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 361  Q
    ||||| |||||||||||||||||||||  | |||| || ||||||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||    
T  35584681 gtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaatatttgggcgtcaacg 35584582  T
Q  362 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  35584581 ttgcagatccggagccaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 35584516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 7342548 - 7342905
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||| ||||| ||||||||||||| |||| | || |||||||||  ||||||||||||||||| |||| | | ||||| ||||| ||||||| |||    
T  7342548 cggccctaattttctctctctaggttttctcttcccgtttcttcattggggggtggttttgggtcaatttttgacctgaaatcacccc-tcttcatattt 7342646  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    || | |||| |||||||||||||||||| ||| ||  | || || |       | ||||||||||||||||||||||||||||||||||||||||||| |    
T  7342647 ttttatctatttcaatctaaataagtgacttttacgtagatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 7342746  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    |||||||||||||||| |||| | ||||  | || |||| |||| |||| |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  7342747 tgtgcggcgttgtttgttttcccgtcttcttgcgttgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcaga 7342846  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  7342847 tccggagaccatggatattccggtgactttaattttatcatatatttttataggcatta 7342905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 5701083 - 5701442
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| ||||||| ||||| ||||||| | |||| ||||| |||||  ||||||||||   || | | ||||| ||||| |||||||||||    
T  5701083 cggccctagttttctctctctaagttttctcttacaatttctttattgaggggtgactttgggtcaatacttgacctgaaatcacccc-tcttcatcttt 5701181  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn--ccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 266  Q
    |||||| || |||||| ||||||||||||||||||| | || ||||         | |||| |||||||||||||||||||||| |||||||||||||||    
T  5701182 ttctctttatttcaatttaaataagtgattttcacatagatctaggtttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgt 5701281  T
Q  267 attgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgca 366  Q
     |||||||||||||||||||||| | |||| || ||||||| |||||||||||||||||| ||||||| |||||||||||||||| || |||||||||||    
T  5701282 cttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaatatcgattgttcaatcaaagatttgggcatcaacgttgca 5701381  T
Q  367 gatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||| | ||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  5701382 gatccggagacaatggatattccggtcactttaatttcatcatatatttgtgtaggcatta 5701442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 84 - 427
Target Start/End: Complemental strand, 30818585 - 30818249
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    ||||||| ||||| | ||||||| |||||||||| |||| |||||||||||| | || | | ||||| ||||  |||||||||||||||||||| |||||    
T  30818585 ctctctaagttttcttttacagtttcttcattgaggggtagttttgggtcaattattgacctgaaatcaccca-tcttcatctttttctctctatttcaa 30818487  T
Q  184 tctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgttt 283  Q
    ||||||||||||||||||||| |||| |||          ||||||||||||||||||||||||||||||||||||||||||| |||||     ||||||    
T  30818486 tctaaataagtgattttcacataaatctagttttttttt-ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtg-----ttgttt 30818393  T
Q  284 gatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaa 383  Q
    ||| || | || | || ||||||| ||||||||| ||| ||||||||||||||||||||||||||||  |||| ||||||| |||||||| |||||||||    
T  30818392 gatctcccgtcattgtgcggtgttcatttgattcttatcgaaagatcgattattcaatcaaagatttaggcgttaacgttgtagatccggtggccatgaa 30818293  T
Q  384 tattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30818292 tattccggtcactttaattttatcatatatttttgtaggcatta 30818249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 85 - 427
Target Start/End: Complemental strand, 25406523 - 25406182
Alignment:
Q  85 tctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaat 184  Q
    |||||| |||||||||| | || |||||||||  ||||| ||||||||||| | || | | ||||| || || |||||||||||||||||||| ||||||    
T  25406523 tctctaagttttttcttcccgtttcttcattggggggtgattttgggtcaattcttgacctgaaatcacacc-tcttcatctttttctctctatttcaat 25406425  T
Q  185 ctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttg 284  Q
    |||||||||||| ||||||| | || ||||       | |||||||||| |||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  25406424 ctaaataagtgactttcacatagatctaggtttttttctttgtgatttcgtcatctaagtgtggtggtttattgttcgtcgtcttgtgtggcgttgtttg 25406325  T
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaat 384  Q
     |||| | ||||  | ||||||| |||| |||| ||||||||||||||||||||||||||||||||   |||||||||||||||||| |||| |||| ||    
T  25406324 ctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttcgacgtcaacgttgcagatccagaggtcatggat 25406225  T
Q  385 attccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  25406224 attccggtgactttaattttatcatatatttttgtaggcatta 25406182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 154 - 421
Target Start/End: Original strand, 9919299 - 9919566
Alignment:
Q  154 cccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtt 253  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||| | || || |       | ||||||||||| ||||||||||||||||||    
T  9919299 cccctcttcatctttttctctctatttcaatctaaataagtgatttttacatagatctatgtttttttctttgtgatttcaccatctaagtgtggtggtt 9919398  T
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    ||||||||||||| |||| |||||||||||| |||| | ||||  | ||||||| |||| |||| ||||||||||||||||||||||||||||||||||     
T  9919399 tgttgttcgtcgtcttgtacggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttgaa 9919498  T
Q  354 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtag 421  Q
    |||||| |||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  9919499 cgtcaatgttgcaaatccggaggccatgaatattccggtgactttaatttgatcatatatttttgtag 9919566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 108 - 427
Target Start/End: Original strand, 9172353 - 9172673
Alignment:
Q  108 tcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaa 207  Q
    |||||||||  ||||||||||||||||| | || | | ||||| ||||| ||||||| ||||| |||||| |||||||||||||||||| ||||||| |     
T  9172353 tcttcattggggggtggttttgggtcaattcttgacctgaaatcacccc-tcttcatatttttttctctatttcaatctaaataagtgactttcacatag 9172451  T
Q  208 atataggnnnnnnnccttgtg--atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtg 305  Q
    || ||||       | |||||  |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||  | |||||    
T  9172452 atctaggtttttttctttgtgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtg 9172551  T
Q  306 tttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatttta 405  Q
    || |||| |||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  9172552 ttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatagatattccggtgactttaatttta 9172651  T
Q  406 tcatatatttttgtaggcatta 427  Q
    |||||||||||| |||||||||    
T  9172652 tcatatatttttataggcatta 9172673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 108 - 427
Target Start/End: Original strand, 9180335 - 9180655
Alignment:
Q  108 tcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaa 207  Q
    |||||||||  ||||||||||||||||| | || | | ||||| ||||| ||||||| ||||| |||||| |||||||||||||||||| ||||||| |     
T  9180335 tcttcattggggggtggttttgggtcaattcttgacctgaaatcacccc-tcttcatatttttttctctatttcaatctaaataagtgactttcacatag 9180433  T
Q  208 atataggnnnnnnnccttgtg--atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtg 305  Q
    || ||||       | |||||  |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||  | |||||    
T  9180434 atctaggtttttttctttgtgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtg 9180533  T
Q  306 tttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatttta 405  Q
    || |||| |||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  9180534 ttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatagatattccggtgactttaatttta 9180633  T
Q  406 tcatatatttttgtaggcatta 427  Q
    |||||||||||| |||||||||    
T  9180634 tcatatatttttataggcatta 9180655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 165 - 427
Target Start/End: Original strand, 34519054 - 34519311
Alignment:
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 264  Q
    ||||||||||||| |||||||||||||||||||||||||| | || ||||       | || ||||||||||||||||||||||||||||||||||||||    
T  34519054 ctttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttt-ctttttgatttcatcatctaagtgtggtggtttgttgttcgtc 34519152  T
Q  265 gtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttg 364  Q
    || |||||||||||||||||||||||| ||||  |  |||||| |||||||||||||||||||||||||||||||||||| ||||||  |    ||||||    
T  34519153 gttttgtgcggcgttgtttgatttctcgtcttcttgtggtgttcatttgattcatattgaaagatcgattattcaatcaacgatttggac----acgttg 34519248  T
Q  365 cagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  34519249 cagatccggaggccatggatattccggtcactttaattttatcatatatttttgtatgcatta 34519311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 84 - 427
Target Start/End: Original strand, 11453776 - 11454118
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctct--aattc 181  Q
    ||||||||||||| |||| |||| |||||||||| || ||||||  |||||| |||| |   ||||| || |  |||||||||||||||||||  | |||    
T  11453776 ctctctaggttttctctttcagtttcttcattgagggatggtttctggtcaatttttgacttgaaatcactc--tcttcatctttttctctctctatttc 11453873  T
Q  182 aatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgt 281  Q
    |||||||||||||| |||||||| | || ||||       | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||    
T  11453874 aatctaaataagtggttttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgctgt 11453972  T
Q  282 ttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatg 381  Q
    |||||||| | ||||  | |||| || ||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||     
T  11453973 ttgatttcccgtctttttgcggtattcatttgattcatcttgaaagagcgattattcaatcaaagatttgagcgtcaacattgcagatccggaggtcata 11454072  T
Q  382 aatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
     |||||| |||||||||||||||||||||||||| |||||||||||    
T  11454073 gatattctggtcactttaattttatcatatatttatgtaggcatta 11454118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 158 - 427
Target Start/End: Original strand, 14545434 - 14545700
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    ||||||||||||||||| || |||||||||||||||||||||||||| | || ||||       | ||||||||||||||||||||||||||||||||||    
T  14545434 tcttcatctttttctctatatttcaatctaaataagtgattttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgtt 14545532  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    ||||||||| ||||||| || ||||||||| | | ||||  | ||||||| || ||||| || ||||| ||||||||||||||||||||||||| |||||    
T  14545533 gttcgtcgtcttgtgcgacgctgtttgattcc-cgtcttcttgcggtgttcatctgatttattttgaa-gatcgattattcaatcaaagatttgggcgtc 14545630  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  14545631 aacgttgcagatccggaggccatgagtattccgatcattttaattttatcatatatttttgtaggcatta 14545700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 120 - 427
Target Start/End: Original strand, 3871285 - 3871591
Alignment:
Q  120 ggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnn 219  Q
    ||||||||||||| || | || ||| ||||| ||||||| ||||||||| |||||| | |||||||||||||||||||||||||| | || || |         
T  3871285 ggtggttttgggttaattcttgatctgaaatcacccccttttcatctttctctctcaatttcaatctaaataagtgattttcacatagatctaagttttt 3871384  T
Q  220 nnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcat 319  Q
      | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||  | |||||||  ||||||| ||    
T  3871385 t-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcttgcggtgttc-tttgatttat 3871482  T
Q  320 att-gaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttg 418  Q
    ||| ||||||||||||||||||||||||||||| | ||||||||||||||||| |||| |||| ||||| |||||||| |||||||| ||||||||||||    
T  3871483 atttgaaagatcgattattcaatcaaagatttgggtgtcaacgttgcagatccagaggtcatgtatatttcggtcactataattttaacatatatttttg 3871582  T
Q  419 taggcatta 427  Q
    |||||||||    
T  3871583 taggcatta 3871591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 84 - 427
Target Start/End: Complemental strand, 18569550 - 18569209
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    ||||||||||||| |||| |||| |||||||||| ||||||||||||||||| |||| |   ||||| |||   |||||||||||||||||||| |||||    
T  18569550 ctctctaggttttctcttccagtttcttcattgaggggtggttttgggtcaatttttgacaagaaatcacctg-tcttcatctttttctctctatttcaa 18569452  T
Q  184 tctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgttt 283  Q
    ||||||||||||||||||||| | || ||||       | | |||||||| |||| | ||||||||||| ||||||||||| | |||| ||| ||||||     
T  18569451 tctaaataagtgattttcacatagatctaggttttcttcttcgtgatttcgtcatttgagtgtggtggtgtgttgttcgtcatcttgtccggtgttgtta 18569352  T
Q  284 gatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaa 383  Q
    |||||| | ||||  | ||||||| |||| ||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||| |||| ||||      
T  18569351 gatttcccgtcttgttgcggtgttcatttaattcatattgaaagatcgattattcaattgaagatttgggtgtcaacgttgcagatccagagg-catggg 18569253  T
Q  384 tattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  18569252 tattccggtcactttaattttatcatatacttttgtaggcatta 18569209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 92 - 427
Target Start/End: Original strand, 30878924 - 30879258
Alignment:
Q  92 gttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaata 191  Q
    ||||| ||||||| | |||||||||| ||||||||||||||||| |||| | | || || | | | ||||||||||||||||| || || ||||||||||    
T  30878924 gttttctcttacaatttcttcattgaggggtggttttgggtcaatttttgacctgagatcatctc-tcttcatctttttctctttattttaatctaaata 30879022  T
Q  192 agtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttct 290  Q
    ||||||||||||| | || || |        ||| || |||||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||      
T  30879023 agtgattttcacatagatctatgttttttttctttgtaatttcatcatttaagtgtggtgatttgttgttcgtcgtcttgtgcg-cgttgtttgattttc 30879121  T
Q  291 catcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccg 390  Q
    | |||| || ||||||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||| ||||||| ||| ||||||||    
T  30879122 cgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaatatttgggcgtcaacgttgcagattcggaggcaatggatattccg 30879221  T
Q  391 gtcactttaattttatcatatatttttgtaggcatta 427  Q
     |||||||||||| ||||||||||||||||| |||||    
T  30879222 atcactttaatttcatcatatatttttgtagacatta 30879258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 74 - 427
Target Start/End: Original strand, 50148203 - 50148553
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||| |||||||| |||| ||||| | | |||||||||| ||||||||||||||||| | |  ||| ||||| | ||  |||||||| |||||||    
T  50148203 ctagttttctctctctagattttctcttataatttcttcattgaggggtggttttgggtcaattctagatctgaaatcatcca-tcttcatccttttctc 50148301  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn--ccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgt 271  Q
    | || || ||||||||||||||||||||||| | || ||||         | |||| |||||||| ||||||||||||| ||||||||    ||| ||||    
T  50148302 tttattttaatctaaataagtgattttcacatagatctaggtttttttttctttgtaatttcatcttctaagtgtggtgatttgttgt----cgtcttgt 50148397  T
Q  272 gcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    ||| | |||||||||||| | |||| || ||||||| |||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||    
T  50148398 gcgacattgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatgtgggcgtcaacgttgcagatcc 50148497  T
Q  372 ggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||| || ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  50148498 ggaagcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 50148553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 119 - 427
Target Start/End: Original strand, 20266178 - 20266485
Alignment:
Q  119 gggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnn 218  Q
    ||||||||||||||||| | || |||  |||| ||||  ||||||||||||||||| || |||||||||||||||||||||||||| | || |||         
T  20266178 gggtggttttgggtcaattcttgatctaaaatcaccca-tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagctttt 20266276  T
Q  219 nnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattca 318  Q
       | |||| |||||||||||||||||||||| ||||||||||||||| ||||| ||  |||||||||||| | |||| || |||||   ||||||||||    
T  20266277 tttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgtggaattgtttgatttcccgtcttcgtgcggtggacatttgattca 20266376  T
Q  319 tattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttg 418  Q
    |||||||||||||||| |||||||||||||||| || |||||||||||||| ||||||| ||| || |||| ||||||||||||| |||||||| |||||    
T  20266377 tattgaaagatcgattgttcaatcaaagatttgggcatcaacgttgcagattcggaggcaatggatgttccagtcactttaatttcatcatatacttttg 20266476  T
Q  419 taggcatta 427  Q
    ||| |||||    
T  20266477 tagacatta 20266485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 85 - 427
Target Start/End: Complemental strand, 38520773 - 38520433
Alignment:
Q  85 tctctaggttttttcttacagtgtcttcattgaaggg-tggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    |||||||||||| |||| |||| |||||||| | ||| ||||||||| |||| |||||| | ||||| || |  |||||||||||||||||||| ||| |    
T  38520773 tctctaggttttctctttcagtttcttcattaagggggtggttttggatcaattttttacctgaaatcactca-tcttcatctttttctctctatttcga 38520675  T
Q  184 tctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgta---ttgtgcggcgttg 280  Q
    ||||||||||||||||||||| | || || |       | | |||||||||||||||||| ||||||||||||||||||||||    ||||| |||||||    
T  38520674 tctaaataagtgattttcacatagatctatgtttttt-cttcgtgatttcatcatctaagagtggtggtttgttgttcgtcgtcgtcttgtgtggcgttg 38520576  T
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccat 380  Q
    ||||||||| | | ||  ||||||||| || |||||||||||||||||||||||||| |||||||   ||| ||||||||||||||||| |||||| |||    
T  38520575 tttgatttcccgtattcttacggtgttcatctgattcatattgaaagatcgattattaaatcaaa---ttgtgcgtcaacgttgcagattcggagg-cat 38520480  T
Q  381 gaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    | ||||||| ||||||||||||||||| |||||||||||||||||||    
T  38520479 ggatattccagtcactttaattttatcgtatatttttgtaggcatta 38520433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 224 - 413
Target Start/End: Original strand, 31836787 - 31836975
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||| | |||| || ||||||| |||||||||||||||    
T  31836787 ttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattg 31836886  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatat 413  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||| ||||| || ||| ||||||||||||||||||||| |||||||||    
T  31836887 aaaaatcgattgttcaatcaaagatttgagcgtcaacgttgcagaaccgga-gcaatggatattccggtcactttaatttcatcatatat 31836975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 157 - 416
Target Start/End: Original strand, 39987303 - 39987560
Alignment:
Q  157 ctcttcatctttttctctctaattcaatctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttg 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||| || | | || |||        | | ||||||||| ||||  ||||||||||| |     
T  39987303 ctcttcatctttttctctctgattcaatctaaataagtgatttttcatatagatctag--ttttttcttcgtgatttcaccatccgagtgtggtggtgta 39987400  T
Q  256 ttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcg 355  Q
    ||||||||||| |||||||||||||||||||||  | | ||  | ||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||    
T  39987401 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagaattgggcg 39987500  T
Q  356 tcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttt 416  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  39987501 tcaacgttgcagatccggagg-catgggtattccggtcactttaattttatcatatatttt 39987560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 119 - 427
Target Start/End: Original strand, 27872615 - 27872920
Alignment:
Q  119 gggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnn 218  Q
    ||||||||||||||||| |||| |   ||||| ||||  |||||||||||||| ||||| |||||||||||||||||||||||||| | || || |        
T  27872615 gggtggttttgggtcaatttttgacatgaaatcaccca-tcttcatctttttcgctctatttcaatctaaataagtgattttcacatagatctaagtttt 27872713  T
Q  219 nnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattca 318  Q
       | | |||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||||||| |  ||||  | ||||||| |||| |||||    
T  27872714 tt-cttcgtgattgcatcatctaagtgtggtggtttgttgttcgtcgtcttgttcgacgttgtttgattttttgtcttcttgcggtgttcatttaattca 27872812  T
Q  319 tattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttg 418  Q
     |||||| ||||||||||||||| |||||||||||||||||||||| |||| |||| | | ||||||||||  ||| |||||||||||||||||||||||    
T  27872813 aattgaaggatcgattattcaattaaagatttgagcgtcaacgttgtagat-cggaaggcgtgaatattccaatcattttaattttatcatatatttttg 27872911  T
Q  419 taggcatta 427  Q
    || ||||||    
T  27872912 taagcatta 27872920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 119 - 427
Target Start/End: Complemental strand, 45806014 - 45805726
Alignment:
Q  119 gggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnn 218  Q
    ||||||||||||||||| |||| ||| ||||| |||   ||||| |||||||||||||| |||||||||||||||||| ||||||| |||| ||          
T  45806014 gggtggttttgggtcaatttttgatctgaaatcacctt-tcttcctctttttctctctatttcaatctaaataagtgactttcacataaatctaaataa- 45805917  T
Q  219 nnnccttgtga-tttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattc 317  Q
           |||| |||||||||||||||||||||||||||||||||||||            |||||| |||| | ||||  | ||||||| |||| ||||    
T  45805916 -------gtgactttcatcatctaagtgtggtggtttgttgttcgtcgt------------tgtttgctttcccgtcttcttgcggtgttcatttcattc 45805836  T
Q  318 atattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatattttt 417  Q
      ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  45805835 cgattgaaagatcgattattcaatcaaagatttgaacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatattttt 45805736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 226 - 427
Target Start/End: Complemental strand, 48365864 - 48365664
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagta-cggtgtttatttgattcatattga 324  Q
    |||||||| |||||| ||||||||||| ||||||||||| | ||||||  ||||||||||||| |  |||| ||| ||||||| ||||||||||||||||    
T  48365864 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcatcttgtgcaacgttgtttgattttttgtctt-gtagcggtgttcatttgattcatattga 48365766  T
Q  325 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 424  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||| |  ||| | ||||||| | ||||||||||||||||||||||||||||| |    
T  48365765 aggatcgattattcaatcaaagatttgaacgtcaacgttgcagatccgg-gagcataagtattccgattactttaattttatcatatatttttgtaggaa 48365667  T
Q  425 tta 427  Q
    |||    
T  48365666 tta 48365664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 274 - 427
Target Start/End: Original strand, 40646700 - 40646857
Alignment:
Q  274 ggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgat----tattcaatcaaagatttgagcgtcaacgttgcagat 369  Q
    |||||||||||||||| | |||| || |||||||||||||||||||||||||||||||||    | |||||||||||||||| |||||||||||||||||    
T  40646700 ggcgttgtttgatttcccgtcttcgtgcggtgtttatttgattcatattgaaagatcgatcgattgttcaatcaaagatttgggcgtcaacgttgcagat 40646799  T
Q  370 ccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||| ||| |||||| ||||||| |||||| |||||||||||||||||||||||    
T  40646800 ccggaggcaatggatattctggtcactataatttcatcatatatttttgtaggcatta 40646857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 234 - 427
Target Start/End: Complemental strand, 33817271 - 33817066
Alignment:
Q  234 atcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgat 333  Q
    ||||| ||||||||||||||| ||||| ||||| || ||| ||||||||||||||||| ||||  | ||||||| |||||||||||||||||||||||||    
T  33817271 atcatttaagtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtcttttt-cggtgttcatttgattcatattgaaagatcgat 33817173  T
Q  334 tattcaatcaaa-------------gatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgta 420  Q
    ||||||||||||             ||||||    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33817172 tattcaatcaaattattcaatcaaagatttggatatcaacgttgcagatccggaggccatgaatattccggtcactttaattttctcatatatttttgta 33817073  T
Q  421 ggcatta 427  Q
    |||||||    
T  33817072 ggcatta 33817066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 235 - 427
Target Start/End: Complemental strand, 33876740 - 33876536
Alignment:
Q  235 tcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgatt 334  Q
    |||| ||||||||||||||| ||||| ||||| || ||| ||||||||||||||||| ||||  | ||||||| ||||||||||||||||||||||||||    
T  33876740 tcatttaagtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtcttttt-cggtgttcatttgattcatattgaaagatcgatt 33876642  T
Q  335 attcaatcaaa-------------gatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtag 421  Q
    |||||||||||             ||||||    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33876641 attcaatcaaattattcaatcaaagatttggatatcaacgttgcagatccggaggccatgaatattccggtcactttaattttctcatatatttttgtag 33876542  T
Q  422 gcatta 427  Q
    ||||||    
T  33876541 gcatta 33876536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 226 - 427
Target Start/End: Complemental strand, 39927653 - 39927453
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    |||||||| |||||  ||||||||||| ||||||||||||| ||||| |||||||||||||||| | ||||  | ||||||| ||||| |||||||||||    
T  39927653 gtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttgcggtgttcatttgtttcatattgaa 39927554  T
Q  326 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 425  Q
    |||||| |||| |||| ||| |||||   ||||||||||||||||| || | ||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  39927553 agatcggttatccaataaaaaatttggatgtcaacgttgcagatcc-gaagacatgagtattccaatcactttaattttatcatatatttttgtaggcat 39927455  T
Q  426 ta 427  Q
    ||    
T  39927454 ta 39927453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 93 - 427
Target Start/End: Complemental strand, 7312329 - 7312004
Alignment:
Q  93 ttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataa 192  Q
    |||||| || |||| |||||||||| |||| |||||||||||| |||| | |  |||||||  | |||||||||||||||||||| |||||  |||||||    
T  7312329 tttttttttccagtttcttcattgaggggtagttttgggtcaatttttgacctaaaattacttc-tcttcatctttttctctctatttcaaattaaataa 7312231  T
Q  193 gtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctca 292  Q
     ||||||||||  | || ||||       | | |||||||| | |||||||||||||||| |||||||| | || |||||     |||||||||||  |     
T  7312230 atgattttcacgtagatctaggtttttt-cttcgtgatttcgt-atctaagtgtggtggtgtgttgttcattgtcttgtg-----ttgtttgattttccg 7312138  T
Q  293 tcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggt 392  Q
    ||||  | ||||||| ||||||||||||||||||||||||| |||||| ||||||||||  ||||||| ||||||||||||  | ||||| |||| ||||    
T  7312137 tcttgttgcggtgttcatttgattcatattgaaagatcgataattcaaacaaagatttggacgtcaacattgcagatccggttg-catgagtatttcggt 7312039  T
Q  393 cactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||| |||||||||||||||||||||||||||    
T  7312038 cactttagttttatcatatatttttgtaggcatta 7312004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 85 - 288
Target Start/End: Original strand, 19723176 - 19723377
Alignment:
Q  85 tctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttttt-ctctctaattcaa 183  Q
    |||||||||||| ||||| ||| |||||||||| ||||||||||||||||| | || |   ||||| ||| | ||||||| ||||| ||||||| |||||    
T  19723176 tctctaggttttctcttatagtttcttcattga-gggtggttttgggtcaattattgacttgaaatcacctc-tcttcatattttttctctcta-ttcaa 19723272  T
Q  184 tctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgttt 283  Q
    ||||||||||||||||||||| | || ||||       | ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  19723273 tctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgttgttt 19723372  T
Q  284 gattt 288  Q
    |||||    
T  19723373 gattt 19723377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 242 - 427
Target Start/End: Complemental strand, 41081787 - 41081602
Alignment:
Q  242 agtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa-gatcgattattcaa 340  Q
    ||||||||||| |||||||| |||  |||||||||||||||| |||||    |||  | | ||||| || ||||||||||||||| ||||||||||||||    
T  41081787 agtgtggtggtgtgttgttcatcggcttgtgcggcgttgtttaatttcatgccttgttgcagtgttcatatgattcatattgaaaagatcgattattcaa 41081688  T
Q  341 tcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||| || ||||| |||| |||||||||||||||| ||||  ||||| ||||| ||||||||||||||||||||||||||||||||    
T  41081687 tcaaaaatctgagcatcaatgttgcagatccggagg-catgtgtattctggtcattttaattttatcatatatttttgtaggcatta 41081602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 32677120 - 32677028
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  32677120 attcaatcaaagatttgggcgtcaacgttgcagattcggaggcgatggatattccagtcactttaattttatcatatatttttgtaggcatta 32677028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 19723404 - 19723496
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||| |||||||||| |||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  19723404 attcaatcaaagatttgggcgtcaacgtagcagatccggaggcgatggatatttcggttactttaattttatcatatatttttgtaggcatta 19723496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 377
Target Start/End: Original strand, 44637401 - 44637554
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    |||||||||| |||||||| ||||||| | |||||||||| || ||||||| ||||||||| |||| | ||||  ||||||||| |||||||||||||||    
T  44637401 ttgtgatttcgtcatctaaatgtggtgatgtgttgttcgtagtcttgtgcgacgttgtttggtttcccgtcttgttacggtgttcatttgattcatattg 44637500  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 377  Q
    ||||||| | ||||  |||||||||||  |||||||| ||| ||||| ||||||    
T  44637501 aaagatcaaatattacatcaaagatttaggcgtcaacattgaagatctggaggc 44637554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 40646514 - 40646647
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| ||||||||||||| ||||||| | |||||||||| ||||||||||||||||| | || | |  |||| | | | |||||||||||    
T  40646514 cggccctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctaaaatca-ctcatcttcatcttt 40646612  T
Q  169 ttctctctaattcaatctaaataagtgattttcac 203  Q
    |||| | || |||||||||||||||||||||||||    
T  40646613 ttctatttatttcaatctaaataagtgattttcac 40646647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 25728185 - 25728080
Alignment:
Q  98 tcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgat 197  Q
    ||||||| | |||||| ||| ||||||||||||||||| | || | | ||||| | | ||||||||||||||||||| || |||||||||||||||||||    
T  25728185 tcttacaatttcttcaatgacgggtggttttgggtcaattcttgacctgaaatca-ctcctcttcatctttttctctttatttcaatctaaataagtgat 25728087  T
Q  198 tttcaca 204  Q
    |||||||    
T  25728086 tttcaca 25728080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 11709649 - 11709605
Alignment:
Q  383 atattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11709649 atattccggtcactttaattttatcatatatttttgtaggcatta 11709605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 34528719 - 34528795
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| ||| |||| ||||||||||||| ||||||  | |||||||| |||| || |||||||||||||    
T  34528719 tgttgttcgtcgtcttgcgcggtgttgtttgatttcgcatcttgtttcggtgtttctttggtttatattgaaagatc 34528795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 42491049 - 42491097
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  42491049 tttgatttctcgtcttagtgcggtgtttatttgattcagattgaaagat 42491097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 44543262 - 44543337
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    |||||||||||||||| ||||||||||||||||||  ||||||| | ||||| ||  ||| ||||||||||||||||    
T  44543262 tgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattgcggtg-ttcgttggttcatattgaaagatc 44543337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 47132892 - 47132968
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| |||||||||||||||| ||||| | ||||  | |||||||  |||| ||||||||||||||||    
T  47132892 tgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaaagatc 47132968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 21947626 - 21947537
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    |||||| ||| ||||||  ||||||||||||||||||||| | |||||||||| |||| |||| | ||||||||||| | ||||||||||||    
T  21947626 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catgaatatttcggtgacttaagttttatcatat-tatttgtaggcatt 21947537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 27915046 - 27915007
Alignment:
Q  383 atattccggtcactttaattttatcatatatttttgtagg 422  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  27915046 atattccggtcactttaatttcatcatatatttttgtagg 27915007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 296
Target Start/End: Original strand, 16161823 - 16161865
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 296  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  16161823 tgttgttcgtcgtcttgtgcggcgttgtttgatttcacatctt 16161865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 29184222 - 29184276
Alignment:
Q  276 cgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    |||||||||||||| | ||||| || ||||||| |||||||||||||||||||||    
T  29184222 cgttgtttgatttcacgtcttattatggtgtttctttgattcatattgaaagatc 29184276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 296
Target Start/End: Complemental strand, 34413197 - 34413155
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 296  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  34413197 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatctt 34413155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 371
Target Start/End: Original strand, 4397036 - 4397097
Alignment:
Q  310 tttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    |||||||| |||||||| |||||| ||||||| || |||||| |||| ||||||||||||||    
T  4397036 tttgattcttattgaaaaatcgatcattcaatgaatgatttgggcgtgaacgttgcagatcc 4397097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 326
Target Start/End: Complemental strand, 4870994 - 4870953
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaa 326  Q
    ||||||||||||||| |||||||||||||||||| |||||||    
T  4870994 atttctcatcttagtgcggtgtttatttgattcagattgaaa 4870953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 427
Target Start/End: Complemental strand, 31130532 - 31130491
Alignment:
Q  386 ttccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  31130532 ttccggtcactttaattttattatgtatttttgtaggcatta 31130491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 374
Target Start/End: Original strand, 31317795 - 31317859
Alignment:
Q  310 tttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgga 374  Q
    |||||||| |||||||||||| | | ||||||||| |||||| ||||||||||| |||| |||||    
T  31317795 tttgattcctattgaaagatcaacttttcaatcaatgatttgggcgtcaacgttacagacccgga 31317859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 42276511 - 42276559
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||||||    
T  42276511 tttgatttcccatcttagtgcggtgtttatttgattcaggttgaaagat 42276559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 49626903 - 49626978
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| |||||||||||||||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  49626903 tgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatc 49626978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 415
Target Start/End: Complemental strand, 51916673 - 51916595
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatattt 415  Q
    |||||||||| |||||||||||||||||||||||| |||| | ||||| |||| | || ||||  ||||||||||||||||    
T  51916673 attcaatcaatgatttgagcgtcaacgttgcagatacggaag-catgagtatttc-gtgacttagattttatcatatattt 51916595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 426
Target Start/End: Original strand, 4413210 - 4413287
Alignment:
Q  347 atttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    ||||| |||||||||||||||||||||| | |||||||||| |||| ||||   ||||||||||| | ||||||||||||    
T  4413210 atttgggcgtcaacgttgcagatccggaag-catgaatatttcggtgacttaggttttatcatat-tatttgtaggcatt 4413287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 5983798 - 5983853
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    |||||||||| || |||||||| || | ||||||||||||||| ||||||||||||    
T  5983798 ttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 5983853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 18650044 - 18649993
Alignment:
Q  163 atctttttctctctaattcaatctaaataagtgattttcacaaaaatatagg 214  Q
    ||||||| ||||||| ||| |||||||||||| ||||||||| |||||||||    
T  18650044 atcttttcctctctatttcgatctaaataagtaattttcacataaatatagg 18649993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 44915723 - 44915812
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    |||||||||| |||||| ||||||| |||||||||||||| | ||||| |||| ||||  |||  |||||||||||| | ||||||||||||    
T  44915723 attcaatcaatgatttgggcgtcaatgttgcagatccggaag-catgagtatttcggtttcttagattttatcatat-tatttgtaggcatt 44915812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 48750170 - 48750250
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatct----tagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| ||||||| |||||||||||||| |||||    | || |||||||  |||||||| ||||||||||||    
T  48750170 tgttgttcgtcgtcttgtgcgacgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgattcgtattgaaagatc 48750250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 288
Target Start/End: Original strand, 12635159 - 12635193
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgattt 288  Q
    ||||||||||||| |||||||||||||||||||||    
T  12635159 tgttgttcgtcgtcttgtgcggcgttgtttgattt 12635193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 329
Target Start/End: Complemental strand, 45193595 - 45193545
Alignment:
Q  279 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| | |||||||||||||||||||||| |||  |||||||||    
T  45193595 tgtttgatttcccgtcttagtacggtgtttatttgaatcaggttgaaagat 45193545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 20411715 - 20411776
Alignment:
Q  268 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    |||||||| ||  ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  20411715 ttgtgcggtgtgttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 20411776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 5155985 - 5156029
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttca 202  Q
    |||||||||| |||||||| ||| ||| |||||||||||||||||    
T  5155985 tcttcatcttcttctctctcatttaatgtaaataagtgattttca 5156029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 8937786 - 8937834
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||  ||||| | |||||||||||||||||| ||||||||||    
T  8937786 tttgatttcttgtcttaatgcggtgtttatttgattcaaattgaaagat 8937834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 9298377 - 9298333
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||| ||||||||| ||||||||||||||||||  |||||||||    
T  9298377 atttcccatcttagtgcggtgtttatttgattcaggttgaaagat 9298333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 15391217 - 15391169
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  15391217 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 15391169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 15791236 - 15791192
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    |||||||| |||||| ||||||||||||||||||  |||||||||    
T  15791236 atttctcaccttagtgcggtgtttatttgattcaggttgaaagat 15791192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 16262944 - 16262984
Alignment:
Q  334 tattcaatcaaagatttgagcgtcaacgttgcagatccgga 374  Q
    ||||||||||| |||||| || |||||||||||||||||||    
T  16262944 tattcaatcaatgatttgtgcatcaacgttgcagatccgga 16262984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 32878876 - 32878912
Alignment:
Q  293 tcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||||||||||||||||||  |||||||||    
T  32878876 tcttagtacggtgtttatttgattcaggttgaaagat 32878912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 36775718 - 36775682
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    |||||||||| |||||| |||||||||||||||||||    
T  36775718 attcaatcaatgatttgggcgtcaacgttgcagatcc 36775682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 44517303 - 44517351
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  44517303 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 44517351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 65 - 427
Target Start/End: Original strand, 12652758 - 12653123
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||| ||||||||||||| ||| ||||| |||||||||| ||||||||||||||||| | || | | ||||| ||||| |||||||    
T  12652758 aagtcggccctagttttctctctctaggttttctctcacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccc-tcttcat 12652856  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn----ccttgtgatttcatcatctaagtgtggtggtttgttgtt 260  Q
    ||||||||||||| |||||||||||||||||||||||||| | || |||            | |||||||||||||||||||||||||||||||||||||    
T  12652857 ctttttctctctatttcaatctaaataagtgattttcacatagatctagattttttttttcctttgtgatttcatcatctaagtgtggtggtttgttgtt 12652956  T
Q  261 cgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaac 360  Q
    | |||| |||||||||||||||||||||  |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  12652957 catcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtcaac 12653056  T
Q  361 gttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  12653057 gttgcagatctggaggtcatggatattccggtcgctttaattttatcatatatttttgtacgcatta 12653123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 74 - 427
Target Start/End: Complemental strand, 23947567 - 23947215
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||| ||||||||||||||||||  ||| |||||||||| ||||||||||||||||| | || | | ||||| ||||  |||||||| |||||||    
T  23947567 ctagttttctctctctaggttttttcttctagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcaccca-tcttcatcgttttctc 23947469  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgc 273  Q
    |||| |||||||||||||||||||||||||| | || ||||       | || |||||||||||||||||||||||||||||||||||||||| ||||||    
T  23947468 tctatttcaatctaaataagtgattttcacatagatctaggtttttt-ctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 23947370  T
Q  274 ggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgg 373  Q
    |||||||||||||||| ||||||  | ||||||| ||||||||||||||||||||||||| || ||||||| |||||| ||||||| |||||||||||||    
T  23947369 ggcgttgtttgatttcccatctttttgcggtgttcatttgattcatattgaaagatcgataatccaatcaacgatttgggcgtcaatgttgcagatccgg 23947270  T
Q  374 aggccatgaatattccggtcacttt-aattttatcatatatttttgtaggcatta 427  Q
    |||||||| |||||| ||||||||| |||||||||||||||||||||||||||||    
T  23947269 aggccatggatattctggtcactttaaattttatcatatatttttgtaggcatta 23947215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 25064057 - 25064415
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| ||||||||||||| ||||||| | |||||||||| ||||||||||||||||| | || | | ||||| ||| | |||||||||||    
T  25064057 cggccctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacctc-tcttcatcttt 25064155  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgta 267  Q
    |||||| || |||||||||||||||||||||||||| | || ||||        ||| || |||||||||||||||||||||| |||||||||||||||     
T  25064156 ttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtc 25064255  T
Q  268 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcag 367  Q
    |||||||||||||||||||||| | | || || ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25064256 ttgtgcggcgttgtttgatttcccgttttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgagcgtcaacgttgcag 25064355  T
Q  368 atccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||| ||| |||| || | ||||||||||| |||||||||||||||||||||||    
T  25064356 atccggaggcaatggatatgcccggcactttaatttcatcatatatttttgtaggcatta 25064415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 98 - 427
Target Start/End: Complemental strand, 33740804 - 33740476
Alignment:
Q  98 tcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgat 197  Q
    |||||| || |||||||||| |||||||||| |||||| | || | |  |||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  33740804 tcttactgtttcttcattgaggggtggtttttggtcaattcttgacctaaaatcacccc-tcttcatctttttctctctatttcaatctaaataagtgat 33740706  T
Q  198 tttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatctta 297  Q
    ||||||| | || ||||       | ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||  | || |     
T  33740705 tttcacatagatttaggtttttttctttgtgatttcatcatctaagtgtggcggtttgttgttcgtcgttttgtgcggcgttgtttcatttaccgtcctc 33740606  T
Q  298 gtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactt 397  Q
    || ||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  33740605 gtgcggtgttcatttgatttatattgaaagatcgattattcaatcgaagatttgagcgtcaacgttgcagatccggaggccatggatatttcggtcactt 33740506  T
Q  398 taattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||| |||||||||    
T  33740505 taattttatcatatatttttataggcatta 33740476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 79 - 427
Target Start/End: Complemental strand, 8028363 - 8028016
Alignment:
Q  79 tttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaa 178  Q
    |||| |||| |||||||| |  |||||| ||||||||||  |||| ||||||||||| | || ||| | ||| |||||  ||||||||||||||||||      
T  8028363 tttctctctttaggttttctagtacagtttcttcattgagaggtgattttgggtcaattattgatctggaatcacccca-cttcatctttttctctctgt 8028265  T
Q  179 ttcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgt 278  Q
    |||||||||||||||||||||||||| | || || |       | || |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8028264 ttcaatctaaataagtgattttcacatagatctaagtttttttctttatgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 8028165  T
Q  279 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggcc 378  Q
    ||||||||||| | || | |||||||||| |||||||||||||| |||||||| ||||||||||||||||||| |||| ||| ||||||||||| ||| |    
T  8028164 tgtttgatttcccgtcatcgtacggtgttcatttgattcatattaaaagatcggttattcaatcaaagatttgggcgttaacattgcagatccgaaggtc 8028065  T
Q  379 atgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  8028064 atggatattccagtcactttaattttatcatatatttttgtaggcatta 8028016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 160 - 427
Target Start/End: Complemental strand, 8196572 - 8196305
Alignment:
Q  160 ttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgt 259  Q
    |||||||||||||||||| |||||||||||||||||||||||||| | || ||||       | ||||||||||||||| ||||||||||||||||||||    
T  8196572 ttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatataagtgtggtggtttgttgt 8196473  T
Q  260 tcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaa 359  Q
    ||||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||| ||  |||||||||||||||||||||| |||||| |||||||    
T  8196472 tcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcttacagaaagatcgattattcaatcaacgatttgggcgtcaa 8196373  T
Q  360 cgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  8196372 cgttgtagatccggaggccatgtatattccggtcactttaattttatcgcatatttttgtaggcatta 8196305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 65 - 427
Target Start/End: Original strand, 8496783 - 8497147
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||  ||||||||| ||||||||||||| ||||||| | |||||||||| ||||||||||| ||||| | || | | ||||| ||||| |||||||    
T  8496783 aagtcggtcctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgagtcaattcttgacctgaaatcacccc-tcttcat 8496881  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn--ccttgtgatttcatcatctaagtgtggtggtttgttgttcg 262  Q
    |||||||||| || |||||||||||||||||||||||||| | || ||||         | ||||  ||||||||| |||||| |||| |||||||||||    
T  8496882 ctttttctctttatttcaatctaaataagtgattttcacatagatctaggtttttttttctttgtagtttcatcatttaagtgcggtgatttgttgttcg 8496981  T
Q  263 tcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgt 362  Q
    || | |||||||||||||||||||||||| |||| || ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  8496982 tcatcttgtgcggcgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattgaaagatcgattcttcaatcaaagatttgggcggcaacgt 8497081  T
Q  363 tgcagatccggaggccatgaatattccggtcactttaattttatcatata-tttttgtaggcatta 427  Q
    ||||||||| || || ||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  8497082 tgcagatcctgatgcaatggatattccggtcactttaatttcatcatatattttttgtaggcatta 8497147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 85 - 427
Target Start/End: Original strand, 4088297 - 4088639
Alignment:
Q  85 tctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttc-tctctaattcaa 183  Q
    |||||||||||| | ||||||  |||| ||||| ||||||||||||||||| | || | | ||||| ||||  ||||||| |||||  |||||| | |||    
T  4088297 tctctaggttttcttttacaggttctttattgaggggtggttttgggtcaattcttgacctgaaatcaccca-tcttcattttttttatctctattacaa 4088395  T
Q  184 tctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgttt 283  Q
    ||||||||||||||||||||| | || |||        | || ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  4088396 tctaaataagtgattttcacatagatctagttttttttctttttgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgttt 4088495  T
Q  284 gatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaa 383  Q
    |||||| | |||| || || |||| ||||||||| ||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |    
T  4088496 gatttcccgtcttcgtgcgatgttcatttgattcttacagaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgga 4088595  T
Q  384 tattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  4088596 tattccggtcactttaattttatcatatatttttgtaggcatta 4088639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 158 - 427
Target Start/End: Original strand, 16419068 - 16419337
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgtt 257  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| | || |  |       | ||||||||||||||||||||||||||||||||||    
T  16419068 tcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctttgtttttttctttgtgatttcatcatctaagtgtggtggtttgtt 16419167  T
Q  258 gttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtc 357  Q
    ||||||||| ||||||||||||||||| |||| | ||||  | ||||||| |||| ||||||||||||| ||||||||||||||||||||||||  ||||    
T  16419168 gttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcatattgaaaaatcgattattcaatcaaagatttggacgtc 16419267  T
Q  358 aacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  16419268 aacgttgcagatccggaggcaatggatattccggtgactttaattttatcatatatttttgtaggcatta 16419337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 17237543 - 17237184
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||| ||||||| ||||| | ||  ||  | | |||||| ||||||||||||||||| | || |   ||||| ||||| |||||||    
T  17237543 aagtcggccctagttttctctctctatgttttcttttctagattttccattgaggggtggttttgggtcaattcttgacatgaaatcacccc-tcttcat 17237445  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 264  Q
    |||||||||| || |||||||||||||||| ||||||||| | || ||||       | ||||||||||| |||||||||||||||||||||||||||||    
T  17237444 ctttttctctatatttcaatctaaataagttattttcacatagatctaggtttttt-ctttgtgatttcagcatctaagtgtggtggtttgttgttcgtc 17237346  T
Q  265 gtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttg 364  Q
    || |||||||||| |||| |||||| | ||||  | ||||||| || |||||||| ||||| ||||||||||||||||||||||||| | ||||||||||    
T  17237345 gtcttgtgcggcgctgttggatttcccgtcttcttgcggtgttcatctgattcattttgaa-gatcgattattcaatcaaagatttgggtgtcaacgttg 17237247  T
Q  365 cagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17237246 cagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggcatta 17237184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 73 - 427
Target Start/End: Complemental strand, 4984828 - 4984465
Alignment:
Q  73 tctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttct 172  Q
    |||||||||  |||| |||||||| ||||||||| ||| |||||| ||||||||||||||||| | || | | ||||| || |  |||||||||||| ||    
T  4984828 tctagttttatctctttaggttttctcttacagtttctccattgaggggtggttttgggtcaattcttgacctgaaatcactca-tcttcatctttt-ct 4984731  T
Q  173 ctctaattcaatctaaataagtgattttcacaaaaata----taggnnnnnnn-------ccttgtgatttcatcatctaagtgtggtggtttgttgttc 261  Q
    ||||| |||||||||||||||||||||||||| | |||    ||||              | ||||||||||||||||||||||||||||||||||||||    
T  4984730 ctctatttcaatctaaataagtgattttcacatatatagatctaggtttttttgtttttcctttgtgatttcatcatctaagtgtggtggtttgttgttc 4984631  T
Q  262 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 361  Q
    ||||| |||||||| ||||||||||||| | |||| ||  |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  4984630 gtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgaggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcatcaacg 4984531  T
Q  362 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  4984530 ttgcagattcggaggtcatggatattccgatcactttaattttatcatatatttttgtaggcatta 4984465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 158 - 427
Target Start/End: Complemental strand, 7881270 - 7881000
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgt 256  Q
    ||||||||||||||||| || |||||||||||||||||||||||||| | || |||         ||| |  |||||||||||||||||||||| |||||    
T  7881270 tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattttttttctttgcaatttcatcatctaagtgtggtgatttgt 7881171  T
Q  257 tgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgt 356  Q
    |||||||||| |||||||||||||||||||||  ||||||  | ||||||| | |||||||||||||||||||||||| |||||||||||||||| ||||    
T  7881170 tgttcgtcgtcttgtgcggcgttgtttgattttccatcttcatgcggtgttcaattgattcatattgaaagatcgattgttcaatcaaagatttgggcgt 7881071  T
Q  357 caacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  7881070 caacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 7881000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 85 - 427
Target Start/End: Original strand, 10228518 - 10228858
Alignment:
Q  85 tctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaat 184  Q
    |||||||||||| |||| | || |||||||||  ||||||||||||||||| | || | | ||||| ||||| ||||||||||| |||||||| ||||||    
T  10228518 tctctaggttttctcttcccgtttcttcattgg-gggtggttttgggtcaattcttgacctgaaatcacccc-tcttcatctttctctctctacttcaat 10228615  T
Q  185 ctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttg 284  Q
    |||||||||||| ||| ||| | || || |       | ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||    
T  10228616 ctaaataagtgacttttacatatatctatgtttttttctttgtgatttcatcatttaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttg 10228715  T
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaat 384  Q
     |||| | ||||  |  |||||| |||| |||  ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||| ||    
T  10228716 ctttcccgtcttcttgtggtgttcattttatttctattgaaagattgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatggat 10228815  T
Q  385 attccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  10228816 attccggtgactttaattttatcatatatttttgtaggcatta 10228858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 7876297 - 7875942
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    ||||| |||||||||||| |||||||||||||        || |||||||||| |||||||||||| |||| | || | |  |||| ||||  |||||||    
T  7876297 aagtcagctctagttttctctctctaggttttc-------gtttcttcattgaggggtggttttggatcaattattgacctaaaatcaccca-tcttcat 7876206  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgt 263  Q
    |||||||||| || |||||||||||||||||||||||||| | || |||         ||| |  |||||||||||||||||||||| ||||||||||||    
T  7876205 ctttttctctttatttcaatctaaataagtgattttcacatagatctagattttttttctttgcaatttcatcatctaagtgtggtgatttgttgttcgt 7876106  T
Q  264 cgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgtt 363  Q
    ||| ||||||| |||||||||||||  |||||| || ||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||    
T  7876105 cgtcttgtgcgacgttgtttgattttccatcttcgtgcggtgttcaattgattcatattaaaagatcgattgttcaatcaaagatttgggcgtcaacgtt 7876006  T
Q  364 gcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||| ||| |||||||| |||||||||||| |||||||||||||||||||||||    
T  7876005 gcagatccggaggcaatggatattccgatcactttaatttcatcatatatttttgtaggcatta 7875942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 4468389 - 4468737
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||||||||||||||||||||||||||||||||||||| ||||||         | ||||||||||| | || |   ||| | ||||| ||||||||||     
T  4468389 cggctctagttttcactctctaggttttttcttacagtttcttcac--------gattttgggtcaattcttgacatgaagtcacccc-tcttcatcttg 4468479  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    ||||||||| |||||||||||||||||||||||| | | || ||||       | ||||||||||||||| |||||||||||||||||| |||||||| |    
T  4468480 ttctctctatttcaatctaaataagtgattttcatatagatctaggtttttt-ctttgtgatttcatcatataagtgtggtggtttgttattcgtcgtct 4468578  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||||| ||||||||||||||  | ||||  | | ||||| |||||||| |||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  4468579 tgtgcagcgttgtttgattttccgtcttcatgcagtgttcatttgatttatattgaaggatcgattattcaatcaaagatttggccgtcaacgttgcaga 4468678  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||| |||| |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  4468679 tccagaggtcatggatattccggccactttaattttatcatatatttttgtaggcatta 4468737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 164 - 427
Target Start/End: Original strand, 35001506 - 35001769
Alignment:
Q  164 tctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgt 263  Q
    |||||||||||||| || ||||||||||||||| ||| ||| | || || |       | ||||||||||||||||||||||||||||||||||||||||    
T  35001506 tctttttctctctattttaatctaaataagtgacttttacatagatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 35001605  T
Q  264 cgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgtt 363  Q
    ||| ||||||||||||||||| |||| | ||||  | ||||||| |||| |||| |||||||||||| ||||||||||||||||||||  ||||||||||    
T  35001606 cgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcaattattcaatcaaagatttggacgtcaacgtt 35001705  T
Q  364 gcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35001706 gcagatccgaaggtcatgaatattccggtgactttaattttatcatatatttttgtaggcatta 35001769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 245 - 427
Target Start/End: Original strand, 33110608 - 33110790
Alignment:
Q  245 gtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaa 344  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||||| |||| || ||||||| |||||||||||||| |||||||||||||||||||||    
T  33110608 gtggtggtttgttgttcatcgtcttgtgcggtgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattaaaagatcgattattcaatcaa 33110707  T
Q  345 agatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||  |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33110708 agattttggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttatcatatatttttgtaggcatta 33110790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 84 - 417
Target Start/End: Original strand, 12165678 - 12166008
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    |||||| |||||| |||| |||| |||||||||| | ||  ||||||||||| | || | | ||||| || || ||||||||||||| |  ||| |||||    
T  12165678 ctctctcggttttctcttccagtttcttcattgaggagttattttgggtcaattattgacctgaaatcactcc-tcttcatctttttatgcctatttcaa 12165776  T
Q  184 tctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgttt 283  Q
    ||||||||||||||||||||| | || ||||       | ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||     
T  12165777 tctaaataagtgattttcacatagatttaggtttttt-ctttgtggttttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttc 12165875  T
Q  284 gatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaa 383  Q
    |||||| | | ||  | ||||||| |||| |||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||| || ||| |    
T  12165876 gatttcacgt-ttcttgcggtgttcatttaattcatattgaaagattgattattcaatcgaagatttgggcgtcaacgttgcagatccggatgctatgga 12165974  T
Q  384 tattccggtcactttaattttatcatatattttt 417  Q
    ||||||||||||||||||||||||||||||||||    
T  12165975 tattccggtcactttaattttatcatatattttt 12166008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 226 - 427
Target Start/End: Complemental strand, 28635220 - 28635011
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    |||||||| |||| | ||||||| ||||||||||||||||| |||| ||| ||||||||||||||| | |   | ||||||| |||||||||||||||||    
T  28635220 gtgatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtacggtgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaa 28635121  T
Q  326 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc--------catgaatattccggtcactttaattttatcatatattttt 417  Q
    ||||  |||||||||||||||||||||||||||| |||||||||||||||||        |||| ||| ||||||||||||||||||||||| |||||||    
T  28635120 agattaattattcaatcaaagatttgagcgtcaatgttgcagatccggaggcatggaagacatggatactccggtcactttaattttatcatgtattttt 28635021  T
Q  418 gtaggcatta 427  Q
    ||||||||||    
T  28635020 gtaggcatta 28635011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 179 - 427
Target Start/End: Original strand, 25337501 - 25337744
Alignment:
Q  179 ttcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgt 278  Q
    |||||||||||||| ||||||||||| |||| ||||       | | |||||||| |||||  ||||||||||| ||||||||||||| ||| |||| ||    
T  25337501 ttcaatctaaataaatgattttcacataaatctaggtttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgcgcggtgt 25337600  T
Q  279 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggcc 378  Q
    |||||||||| || ||||  | ||||||| ||||||||||||||||||||||||||||    | |||||||||||| |||| |||||| |||| |||| |    
T  25337601 tgtttgatttttcgtcttgttgcggtgttcatttgattcatattgaaagatcgattat----tgaaagatttgagcatcaaggttgcaaatccagagg-c 25337695  T
Q  379 atgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||   |||||| ||||| |||||||||||||||||||||||||||||||    
T  25337696 attggtattccagtcaccttaattttatcatatatttttgtaggcatta 25337744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 332 - 427
Target Start/End: Original strand, 7027947 - 7028042
Alignment:
Q  332 attattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  7027947 attattcaatcaaagatttgagcgtcaaccttgtagatccggaggccatagatattccggtcactttaattttatcatatatttttgtaggcatta 7028042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 325 - 427
Target Start/End: Complemental strand, 16892816 - 16892714
Alignment:
Q  325 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 424  Q
    |||||| ||| |||||| ||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  16892816 aagatcaattgttcaattaaagatttaggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggca 16892717  T
Q  425 tta 427  Q
    |||    
T  16892716 tta 16892714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 226 - 427
Target Start/End: Complemental strand, 33543719 - 33543522
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    |||||||| |||||| | | ||||||| ||||||||||||| |||||||||||||||||||||    ||||  | ||||||| |||  ||||||||||||    
T  33543719 gtgatttcgtcatctgattatggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttctgtcttgttgcggtgttcatt--attcatattgaa 33543622  T
Q  326 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 425  Q
    ||||||| |||||||||||| ||||| | ||||| |||||||||||||| | ||||  |||||||  || ||||||||||| |||||||||||||| |||    
T  33543621 agatcgactattcaatcaaaaatttgggtgtcaatgttgcagatccggaag-catgggtattccgacca-tttaattttattatatatttttgtagacat 33543524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 17334846 - 17334932
Alignment:
Q  341 tcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||| | ||||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  17334846 tcaaagatttgggtgtcaacgttgcagatccggaggcaatggatattccagtcactttaatttcatcatatatttttgtaggcatta 17334932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 325
Target Start/End: Original strand, 34489154 - 34489327
Alignment:
Q  154 cccctcttcatctttttctctctaattcaatcta--aataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtg 250  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||| |||| | || ||||       | | ||||||||||||||  |||||||||    
T  34489154 cccctcttcatctttttctctctaattcaatatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtg 34489252  T
Q  251 gtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    || ||||||||||||| ||||||| |||||||||||||| ||| ||  |  |||||| |||||||||||||||||    
T  34489253 gtgtgttgttcgtcgtcttgtgcgacgttgtttgatttcccatattgttgtggtgttcatttgattcatattgaa 34489327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 427
Target Start/End: Complemental strand, 4352095 - 4351903
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    |||||||| |||||  ||||||||| | ||||||||||||| || || |||||| ||||||||| | || | || |||| || |||| ||||||||||||    
T  4352095 gtgatttcgtcatccgagtgtggtgatgtgttgttcgtcgtcttatgtggcgttatttgatttcccgtcatggtgcggtattcatttaattcatattgaa 4351996  T
Q  326 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 425  Q
    |||||||||||| |||||||||||||  |||||||        |||||| | ||||  |||| | ||| ||||||| |||||||||||||||||||||||    
T  4351995 agatcgattatttaatcaaagatttggacgtcaac--------tccggaag-catgggtatttcagtcgctttaatgttatcatatatttttgtaggcat 4351905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 78 - 288
Target Start/End: Original strand, 17334607 - 17334818
Alignment:
Q  78 ttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctcta 177  Q
    ||||| |||||||| |||| ||||||| | |||||||||| |||||||||||| || | | || ||| ||||| |||   ||||||||||||||| | ||    
T  17334607 ttttctctctctagattttctcttacaatttcttcattga-gggtggttttggatcgattcttgatctgaaatcaccaa-tcttcatctttttctgttta 17334704  T
Q  178 attcaatctaaataagtgattttcacaaaaatataggnnnnnnn---ccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcg 274  Q
     |||||||||||||||||||||||||| | || || |          | |||| ||||||| |||||||||||||| |||||||| |||||| |||||||    
T  17334705 tttcaatctaaataagtgattttcacatagatctaagttttttttttctttgtaatttcataatctaagtgtggtgatttgttgtacgtcgtcttgtgcg 17334804  T
Q  275 gcgttgtttgattt 288  Q
    ||||||||||||||    
T  17334805 gcgttgtttgattt 17334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 33109656 - 33109790
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| || | |||||||| |||| |||| |||||||||| ||||||||||||||||| |||| | |  ||||   ||  |||||||||||    
T  33109656 cggccctagttttctctttttaggttttctcttccagtttcttcattgacgggtggttttgggtcaatttttgacctaaaatcgtcca-tcttcatcttt 33109754  T
Q  169 ttctctctaattcaatctaaataagtgattttcaca 204  Q
    |||||| || ||||||||||||||||||||||||||    
T  33109755 ttctctttatttcaatctaaataagtgattttcaca 33109790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 411
Target Start/End: Complemental strand, 1704233 - 1704065
Alignment:
Q  242 agtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaat 341  Q
    ||||||||| | ||||||||||  | ||||||  | || ||| ||||||| ||||  | ||||||| ||||| |||  || |||| ||||||||||||||    
T  1704233 agtgtggtgttgtgttgttcgtgatcttgtgcaacattatttaatttctcgtcttgttgcggtgttcatttggttctaatcgaaatatcgattattcaat 1704134  T
Q  342 caaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
     || ||||||| | ||||||||| ||||||||| | |||||||||||| |||||||||||| ||||||||    
T  1704133 aaatgatttgaacatcaacgttgtagatccggatg-catgaatattccagtcactttaattgtatcatat 1704065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 7027811 - 7027874
Alignment:
Q  225 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgattt 288  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  7027811 tgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtacggagttgtttgattt 7027874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 420
Target Start/End: Original strand, 20619585 - 20619639
Alignment:
Q  366 agatccggaggccatgaatattccggtcactttaattttatcatatatttttgta 420  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  20619585 agatccggagaccatggatattccggtcactttaattttatcatatatttttgta 20619639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 12059732 - 12059671
Alignment:
Q  366 agatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| ||||    
T  12059732 agatccggagaccatggatattccggtcactttaattttatcatatttttttgtaggaatta 12059671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 411
Target Start/End: Original strand, 25398617 - 25398725
Alignment:
Q  302 ggtgtttatttgattcat-attgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaa 400  Q
    |||||||||||| ||| | ||||||| || |||||||||||||| |||||| ||||||||||||| |||||||| | ||| | | ||||| |||||||||    
T  25398617 ggtgtttatttggttctttattgaaa-attgattattcaatcaatgatttgggcgtcaacgttgctgatccgga-gacataagttttccgatcactttaa 25398714  T
Q  401 ttttatcatat 411  Q
    |||||||||||    
T  25398715 ttttatcatat 25398725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 200
Target Start/End: Original strand, 8266545 - 8266587
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgatttt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  8266545 tcttcatctttttctctctacttcaatctaaataagtgatttt 8266587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 330
Target Start/End: Original strand, 30493491 - 30493595
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    |||||||| || ||| |||| |||| | ||||||||||||| |||||| |||||||||||||||  |||||  |  ||||||  |||| |||||||||||    
T  30493491 gtgatttcctcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatattgaa 30493590  T
Q  326 agatc 330  Q
    |||||    
T  30493591 agatc 30493595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 344
Target Start/End: Original strand, 9426873 - 9426939
Alignment:
Q  278 ttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaa 344  Q
    ||||||||||| |||||||  || | ||||||||||||||||||||||||||   ||||||||||||    
T  9426873 ttgtttgatttttcatcttgttatgatgtttatttgattcatattgaaagataagttattcaatcaa 9426939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 26588567 - 26588499
Alignment:
Q  262 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||| |||||||||||||||||||||| | ||||  | |||||||  |||| ||||||||||||||||    
T  26588567 gtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatc 26588499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 31296807 - 31296879
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 326  Q
    |||||||| || | |||||||||||||||||||||  ||||||  | | ||||| ||||||||||||||||||    
T  31296807 tgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaa 31296879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 31705321 - 31705369
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| ||||||| ||||||||||||||||||  |||||||||    
T  31705321 tttgatttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 31705369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 8102709 - 8102789
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatct----tagtacggtgtttatttgattcatattgaaagatc 330  Q
    |||| |||||||| |||||||||||||||||||||| |||||    | || |||||||| |||| ||| ||||||||||||    
T  8102709 tgtttttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgtttgtttggttcgtattgaaagatc 8102789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 9508876 - 9508837
Alignment:
Q  165 ctttttctctctaattcaatctaaataagtgattttcaca 204  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  9508876 ctttttctttttaattcaatctaaataagtgattttcaca 9508837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 13436705 - 13436748
Alignment:
Q  166 tttttctctctaattcaatctaaataagtgattttcacaaaaat 209  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||    
T  13436705 tttttctctctatttcaatttaaataagtgattttcacataaat 13436748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 427
Target Start/End: Original strand, 34489357 - 34489399
Alignment:
Q  384 tattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  34489357 tattccggtcactttaattttatc-tatatttttgtagccatta 34489399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 17346717 - 17346671
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcaca 204  Q
    ||||||||||||||| ||||||| ||| ||||||| |||||||||||    
T  17346717 tcttcatctttttctttctaatttaatataaataaatgattttcaca 17346671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 329
Target Start/End: Complemental strand, 19402777 - 19402727
Alignment:
Q  279 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  19402777 tgtttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 19402727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 288
Target Start/End: Original strand, 22571461 - 22571495
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgattt 288  Q
    ||||||||||||| |||||||||||||||||||||    
T  22571461 tgttgttcgtcgtcttgtgcggcgttgtttgattt 22571495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 329
Target Start/End: Complemental strand, 23638087 - 23638037
Alignment:
Q  279 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  23638087 tgtttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 23638037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 411
Target Start/End: Original strand, 8266716 - 8266792
Alignment:
Q  334 tattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    ||||||||||| |||||| |||||||| ||| ||| ||||||| || |  ||||||  ||||||||||||||||||||    
T  8266716 tattcaatcaatgatttgggcgtcaacattgtagacccggagg-caagggtattccaatcactttaattttatcatat 8266792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 546113 - 546149
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    |||||||||| |||||| |||||||||||||||||||    
T  546113 attcaatcaatgatttgggcgtcaacgttgcagatcc 546149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 1915139 - 1915103
Alignment:
Q  293 tcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||||||||||||||||||  |||||||||    
T  1915139 tcttagtacggtgtttatttgattcaggttgaaagat 1915103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 14801909 - 14801945
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    |||||||||| |||||| |||||||||||||||||||    
T  14801909 attcaatcaatgatttgggcgtcaacgttgcagatcc 14801945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 23654406 - 23654454
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  23654406 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 23654454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 29284913 - 29284957
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||||    
T  29284913 atttctcgtcttagtgcggtgtttatttgattcaagttgaaagat 29284957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 334
Target Start/End: Complemental strand, 31575638 - 31575530
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    |||||||| |||||| | || |||| | |||||||| ||||  |||||| |||||||||||||||| ||||  | || ||||  | |||||| |||||||    
T  31575638 gtgatttcgtcatctgaatgcggtgttatgttgttcatcgtcatgtgcgacgttgtttgatttctcgtcttgttgcgatgttcgtctgattcctattgaa 31575539  T
Q  326 agatcgatt 334  Q
    | |||||||    
T  31575538 aaatcgatt 31575530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 411
Target Start/End: Complemental strand, 31852197 - 31852126
Alignment:
Q  339 aatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    |||||| ||||||| |||||| |||||||||||||| | ||||| ||||| ||| | || |||||||||||||    
T  31852197 aatcaatgatttgaacgtcaaagttgcagatccggaag-catgagtattctggtgatttaaattttatcatat 31852126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 68 - 427
Target Start/End: Complemental strand, 42448284 - 42447925
Alignment:
Q  68 tcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctt 167  Q
    ||||| ||||||||| ||||||||||||| ||||||||| |  ||||||| |||||||||||||| || | || | | ||||| ||||| ||||||||||    
T  42448284 tcggccctagttttctctctctaggttttgtcttacagttttgtcattgaggggtggttttgggttaattcttgacctgaaatcacccc-tcttcatctt 42448186  T
Q  168 tttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 266  Q
    |||||||||| ||||||||||||||||||||| || | | || ||||        ||| ||||||||||||||||||||||| |||||||||||||||||    
T  42448185 tttctctctatttcaatctaaataagtgatttacatatagatctaggttttgtttctttgtgatttcatcatctaagtgtggaggtttgttgttcgtcgt 42448086  T
Q  267 attgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgca 366  Q
     ||||||||| ||||||||||| || |||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  42448085 cttgtgcggcattgtttgatttttcgtcttcgtgcggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgca 42447986  T
Q  367 gatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  42447985 gatccgaaggccatgaatattccagacactttaattttatcatatatttttgtaggcatta 42447925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 43890384 - 43890022
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||| ||||||||||||| ||||||| | |||||||||| |||||||||||| |||  |||| | | ||||| ||||| |||||||    
T  43890384 aagtcggccctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttggatcattttttgacctgaaatcacccc-tcttcat 43890286  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgt 263  Q
    |||||||||| ||||||||||||||||||||||||| ||| | || |||         ||| || |||||||||||||||| ||||| ||||||||||||    
T  43890285 ctttttctctttaattcaatctaaataagtgattttgacatagatctagattttttttctttgtaatttcatcatctaagtatggtgatttgttgttcgt 43890186  T
Q  264 cgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgtt 363  Q
    ||| ||||||| |||| ||||||||| | |||| |||||||||| ||||||||||| |||||||||||||| |||||||||||||||| |||||||||||    
T  43890185 cgtcttgtgcgacgttatttgatttcccgtcttcgtacggtgttcatttgattcattttgaaagatcgattgttcaatcaaagatttgggcgtcaacgtt 43890086  T
Q  364 gcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  43890085 gcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 43890022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 69 - 420
Target Start/End: Complemental strand, 9619613 - 9619262
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||||||||||||| |||||||| |||| ||||||| | |||||||||| ||||||||||||||||| | || | | ||||| ||||| |||||||||||    
T  9619613 cggctctagttttctctctctagattttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccc-tcttcatcttt 9619515  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncc-ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgta 267  Q
    |||||| || |||||||||||||||||||||||||| | || |||         | |||| ||||||||||||| |||||||| |||||||||||||||     
T  9619514 ttctctttatttcaatctaaataagtgattttcacatagatttagattttttttcattgtaatttcatcatctacgtgtggtgatttgttgttcgtcgtc 9619415  T
Q  268 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcag 367  Q
    |||||||||||||||||||||| | |||| || ||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||||| ||||||    
T  9619414 ttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttaaatcaaagatttgggcgtcaactttgcag 9619315  T
Q  368 atccggaggccatgaatattccggtcactttaattttatcatatatttttgta 420  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||    
T  9619314 atccggaggcaatggatattccggtcactttaatttcatcatatatttttgta 9619262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 92 - 427
Target Start/End: Original strand, 4808816 - 4809150
Alignment:
Q  92 gttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaata 191  Q
    ||||| ||||||| | |||||||||| ||||||||||||||||| | || | | ||||||||||| ||||||||||||| ||| || |||||| ||||||    
T  4808816 gttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctgaaattacccc-tcttcatctttttttctttatttcaatgtaaata 4808914  T
Q  192 agtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctc 291  Q
    ||||||||||||| | || |||        | |||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||  |    
T  4808915 agtgattttcacatagatctagctttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttcc 4809014  T
Q  292 atcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccgg 391  Q
     |||| || ||||||| |||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||| ||| |||||||||    
T  4809015 gtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaggatttgggcgtcaacgttgcagatccggaggcaatggatattccgg 4809114  T
Q  392 tcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||| |||||||||||||||||||||||    
T  4809115 tcactttaatttcatcatatatttttgtaggcatta 4809150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 88 - 432
Target Start/End: Original strand, 34611652 - 34611995
Alignment:
Q  88 ctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatcta 187  Q
    |||| |||| ||||||||| ||||||| || ||||||||||||||||| | || | | ||||| || |  ||||||| ||||||| |||| |||| ||||    
T  34611652 ctagtttttctcttacagtttcttcatcgaggggtggttttgggtcaattcttgacctgaaatcactca-tcttcatatttttctttctatttcagtcta 34611750  T
Q  188 aataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatt 287  Q
    ||||||||||||||||| |||| ||||       | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34611751 aataagtgattttcacataaatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatt 34611850  T
Q  288 tctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatatt 387  Q
    |  | || | || ||||||| |||||||||||||||||||||   | ||||||||||||||||| ||||||||||||||||| ||||||| ||| |||||    
T  34611851 ttccgtcgtcgtgcggtgttcatttgattcatattgaaagataagtaattcaatcaaagatttgggcgtcaacgttgcagattcggaggcgatggatatt 34611950  T
Q  388 ccggtcactttaattttatcatatatttttgtaggcattaacttg 432  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  34611951 ccggtcactttaattttatcatatatttttgtaggcattatcttg 34611995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 69 - 427
Target Start/End: Complemental strand, 44100187 - 44099834
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| ||||||||||||| |||| | || |||||||||| ||||||||||||||| | | || | |  |||| ||||| |||||||||||    
T  44100187 cggccctagttttctctctctaggttttctctttcggtttcttcattgaggggtggttttgggtcgattcttgacctaaaatcacccc-tcttcatcttt 44100089  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    |||||| || |||||||||||||||| ||||||||| | || || |       | ||||||||| ||||||||||||||||||||||||||||||||| |    
T  44100088 ttctctatatttcaatctaaataagttattttcacatagatctaagtttttt-ctttgtgattt-atcatctaagtgtggtggtttgttgttcgtcgtct 44099991  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    ||||||||||||||||||||| | ||||  | ||||||| |||||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||    
T  44099990 tgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaagagttgggcgtgaacgttgcaga 44099891  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  44099890 tccggaggccatgaatattccg--cactttaattttatcatatatttttgtatgcatta 44099834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 11725511 - 11725866
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||||||||| |||||||| |||| |||| |||| |||||||||| ||||||||||||||||| | || | | ||||| ||||| ||||| |||||    
T  11725511 cggccctagttttctctctctagattttctctttcagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccc-tcttcgtcttt 11725609  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtat 268  Q
    |||||| || ||||||||||||||||| |||||||| | || ||||       | || ||||||||||||||||||||||||||||||||||| |||| |    
T  11725610 ttctctttatttcaatctaaataagtgtttttcacatagatctaggtttttt-ctttttgatttcatcatctaagtgtggtggtttgttgttcatcgtct 11725708  T
Q  269 tgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaga 368  Q
    |||||| | |||||||||||| ||| ||  | ||||||| || |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  11725709 tgtgcgacattgtttgatttcccattttcttgcggtgttcatctgattcatattgaa-gatcgattattcaattaaagatttgggcgtcaacgttgcaga 11725807  T
Q  369 tccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  11725808 tccggaggccatggatactccggtcactttagttttatcatatatttttgtaggcatta 11725866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 9498860 - 9498497
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||||||||| ||||||||||||| ||||||| | |||||||||| ||||||||||||||||| || ||| | ||||| ||||| |||||||    
T  9498860 aagtcggccctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgggtcaa-ttcttacctgaaatcacccc-tcttcat 9498763  T
Q  165 ctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn---ccttgtgatttcatcatctaagtgtggtggtttgttgttc 261  Q
    |||||| ||| || |||||||||||||||||||||||||| | || ||||          | |||| |||||||||||||||||||||| ||||||||||    
T  9498762 ctttttatctttatttcaatctaaataagtgattttcacatagatttaggttttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttc 9498663  T
Q  262 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 361  Q
    || || ||||||||| |||||||||||| | |||| || ||||||| |||||||||||||| ||||||||||| ||||||||||||||||  || |||||    
T  9498662 gttgtcttgtgcggctttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaagatcgattgttcaatcaaagatttggacgacaacg 9498563  T
Q  362 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||| ||||||| |||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  9498562 ttgtagatccgaaggcaatggatattcctgtcactttaatttcatcatatatttttgtaggcatta 9498497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 88 - 427
Target Start/End: Original strand, 2655717 - 2656056
Alignment:
Q  88 ctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatcta 187  Q
    |||| |||| ||||||| | ||||||||||  |||||||||||||||| | || | | | ||| ||||  ||||||||||||||||| || |||||||||    
T  2655717 ctagtttttctcttacaatttcttcattgagcggtggttttgggtcaattcttgacctgcaatcaccca-tcttcatctttttctctttatttcaatcta 2655815  T
Q  188 aataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgat 286  Q
    ||||||||||||||||| | || |||         ||| || |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  2655816 aataagtgattttcacatagatctagattttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcagcgttgtttgat 2655915  T
Q  287 ttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatat 386  Q
    ||| | |||| || ||||||| |||||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||||||||| ||| ||||    
T  2655916 ttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggtgtcaacgtcgcagatccggaggcaatggatat 2656015  T
Q  387 tccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  2656016 tccggtcactttaatttcatcatatatttttgtaggcatta 2656056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 224 - 427
Target Start/End: Original strand, 11464154 - 11464357
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  |||| || ||||||| |||||||||||||||    
T  11464154 ttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgattcatattg 11464253  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 423  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||    
T  11464254 aaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggc 11464353  T
Q  424 atta 427  Q
    ||||    
T  11464354 atta 11464357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 84 - 427
Target Start/End: Original strand, 44577880 - 44578216
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    ||||||||||||| |||||| || |||||||||| ||||||||||||||||| |||| | |  |||| || || |||||||||||||||||||| |||||    
T  44577880 ctctctaggttttctcttactgtttcttcattgaggggtggttttgggtcaatttttgacctaaaatcactcc-tcttcatctttttctctctatttcaa 44577978  T
Q  184 tctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgttt 283  Q
    ||||| |||||||||| |||| | || ||||       | |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44577979 tctaactaagtgatttacacatagatctaggtttttttctttgtaatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 44578078  T
Q  284 gatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaa 383  Q
     || || ||||||  | |||| ||||||||||| ||||||||||||||||||||        |||||| |||||||||||||||||||| | | |||| |    
T  44578079 catctcccatcttcatgcggtatttatttgatttatattgaaagatcgattatt------ttgatttgggcgtcaacgttgcagatccgaatgacatgga 44578172  T
Q  384 tattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  44578173 tattccggtcactttaattttatcatatatttttgtaggcatta 44578216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 65 - 427
Target Start/End: Complemental strand, 32724749 - 32724379
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaaggg-tggttttgggtcaaattttt-atcggaaattaccccctcttc 162  Q
    |||||| | ||||||||| |||||| |||||| ||||||||| ||| |||||| ||| ||||||||||||||||| || | | ||||| ||  | |||||    
T  32724749 aagtcgaccctagttttctctctctgggttttctcttacagtttctccattgagggggtggttttgggtcaaattattgacctgaaatcacttc-tcttc 32724651  T
Q  163 atctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn--------ccttgtgatttcatcatctaagtgtggtggttt 254  Q
    ||||||| ||||||| |||||||||||||||||||||||||| | || |||                | || |||||||||||||||| |||||||||||    
T  32724650 atctttt-ctctctatttcaatctaaataagtgattttcacatagatctagattttttttgttttttctttatgatttcatcatctaactgtggtggttt 32724552  T
Q  255 gttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagc 354  Q
    |||||||||||| ||||||||||||||||||||||   |||| || | ||||| |||||||||||||||||| |||||||||||||||||||||||| ||    
T  32724551 gttgttcgtcgtcttgtgcggcgttgtttgatttccagtcttcgtgcagtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggc 32724452  T
Q  355 gtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||    
T  32724451 gtcaacgttgcagatccggaggccatggatattccggtcactttaatcttatcttatatttttgtaggcatta 32724379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 74 - 427
Target Start/End: Complemental strand, 14907174 - 14906821
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||| ||||||||||||| ||||||| | |||||||||| || || |||||| |||| | || | | ||||| ||||  ||||||||||||||||    
T  14907174 ctagttttctctctctaggttttctcttacaatttcttcattgagggatgattttggatcaattcttgacctgaaatcaccca-tcttcatctttttctc 14907076  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtg 272  Q
    | || |||||||||||||||||||||||||| | || ||||        ||| || ||||||||||| || ||||||| ||||||||| ||||| |||||    
T  14907075 tttatttcaatctaaataagtgattttcacatagatctaggttctttttctttgtaatttcatcatcaaaatgtggtgatttgttgtttgtcgtcttgtg 14906976  T
Q  273 cggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccg 372  Q
    ||||||||||||||||| | |||| || || |||| ||||||||| |||| ||||||||||| ||||||||| |||||| |||||||||||||||||  |    
T  14906975 cggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcgtattaaaagatcgattgttcaatcaatgatttgggcgtcaacgttgcagatttg 14906876  T
Q  373 gaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14906875 gaggcaatggatattccggtcactttaattttatcatatatttttgtaggcatta 14906821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 108 - 427
Target Start/End: Original strand, 9072585 - 9072904
Alignment:
Q  108 tcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaa 207  Q
    |||||||||  ||||||||||||||||| |||| |   ||||| ||||| |||||||||||||||||||| |||||| ||||||||||| ||||||| ||    
T  9072585 tcttcattggggggtggttttgggtcaatttttgacttgaaatcacccc-tcttcatctttttctctctatttcaatttaaataagtgactttcacataa 9072683  T
Q  208 atataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgt 306  Q
    || |||         ||| |||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| |||| ||||||  | ||||||    
T  9072684 atctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcttcatcttgtgcggcgttgtttgctttcccatcttcttgcggtgt 9072783  T
Q  307 ttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttat 406  Q
    | |||| |||| |||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||| | |||||||||||||    
T  9072784 tcattttattcctattgaaagatcgattattcaatcaaagatttggatgtcaacgttgcagattcggaggccatggatattccgatgactttaattttat 9072883  T
Q  407 catatatttttgtaggcatta 427  Q
    |||||||||||||| ||||||    
T  9072884 catatatttttgtatgcatta 9072904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 69 - 427
Target Start/End: Original strand, 33895911 - 33896272
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||| ||||| ||||||||||||| ||||   || |||||||||  ||||||||||||||||| | || |||  || | ||||| |||||||||||    
T  33895911 cggccctaattttctctctctaggttttctcttcgcgtttcttcattgg-gggtggttttgggtcaattcttgatctaaagtcacccc-tcttcatcttt 33896008  T
Q  169 ttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnncctt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgta 267  Q
    ||||||||| || ||||||||||||||| ||||||| | || ||||        ||| ||||||||||||||||||||||||||||||||||||||| |     
T  33896009 ttctctctatttaaatctaaataagtgactttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcttc 33896108  T
Q  268 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcag 367  Q
    ||||||||||||||||| |||| | ||||  | ||||||| |||| ||||  ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  33896109 ttgtgcggcgttgtttgttttcccgtcttcttgcggtgttcattttattccaattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcag 33896208  T
Q  368 atccggaggccatgaatattccggtcactttaattt----tatcatatatttttgtaggcatta 427  Q
    |||||||||||||| |||||||||| ||||||||||    ||||||||||||||||||||||||    
T  33896209 atccggaggccatggatattccggtgactttaattttatctatcatatatttttgtaggcatta 33896272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 113 - 427
Target Start/End: Original strand, 19876085 - 19876396
Alignment:
Q  113 attgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatata 212  Q
    ||||| ||||||||||||||||| | || | | |||||||| |  ||||||||||||||||  || |||||||||||||||||||||||||| | ||  |    
T  19876085 attgaggggtggttttgggtcaattcttgacctgaaattactca-tcttcatctttttctcaatatttcaatctaaataagtgattttcacatagatcaa 19876183  T
Q  213 ggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttattt 312  Q
    ||       | ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | | ||||  |  |||||| ||||    
T  19876184 ggtttttt-ctttgtgatttcatcatctaagtgtagtggtttgttgttcgtcgtcttgtgcggcgttgtttgattccccgtcttcttgtggtgttcattt 19876282  T
Q  313 gattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatata 412  Q
    ||||||||||||| ||||||||||||||||||||||||| || | |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  19876283 gattcatattgaa-gatcgattattcaatcaaagatttgggcctgaacgttgcagatccggagaccatggatattccggtcactttaatttgatcatata 19876381  T
Q  413 tttttgtaggcatta 427  Q
    |||||||||||||||    
T  19876382 tttttgtaggcatta 19876396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 65 - 427
Target Start/End: Original strand, 35580282 - 35580642
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattga-agggtggttttgggtcaaatttttatcggaaattaccccctcttca 163  Q
    |||||||| ||| ||||  |||| ||||||||||||| || | |||||||||| |||||||||||||||||| |||| |    |||| || |  ||||||    
T  35580282 aagtcggccctaattttttctctttaggttttttcttccaatttcttcattgagagggtggttttgggtcaatttttgacataaaatcactca-tcttca 35580380  T
Q  164 tctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgt 263  Q
    |||||||||||||| |||||| ||||||||||||||||||| | || ||||       | | ||||||||||||||||||||||||||||||||||||||    
T  35580381 tctttttctctctatttcaatttaaataagtgattttcacatagatctaggtttttt-cttcgtgatttcatcatctaagtgtggtggtttgttgttcgt 35580479  T
Q  264 cgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgtt 363  Q
    ||| ||||||| |||||||||||||  | ||||  | |||||||  |||||||||||||||| ||||||||||||| ||||||||||  || | ||||||    
T  35580480 cgtcttgtgcgacgttgtttgattttccgtcttcttgcggtgttcgtttgattcatattgaatgatcgattattcactcaaagatttaggcatgaacgtt 35580579  T
Q  364 gcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||| | |||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  35580580 gcagatccggatg-catggatattccggtcactttagttttatcatatatttttgtaggcatta 35580642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 74 - 427
Target Start/End: Original strand, 11196726 - 11197069
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||| |||||||| |||| ||||  ||| ||||| |||| ||||||||||||||||| | || | | ||||| | ||  ||||||||||||||||    
T  11196726 ctagttttctctctctagtttttctcttctagtttcttcgttgaggggtggttttgggtcaattcttgacctgaaatcatcca-tcttcatctttttctc 11196824  T
Q  174 tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgc 273  Q
    | |  |||||||||||||||||||||||||| | || ||||       | || |||||||||||||||||||||||||||||||||||||||| ||||||    
T  11196825 tat--ttcaatctaaataagtgattttcacatagatctaggtttttt-ctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 11196921  T
Q  274 ggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgg 373  Q
    |||||||||||||||  | ||||  | ||||||| ||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  11196922 ggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaa-gatcgattattcaatcaacgatttgggcgtcaacgttgcagatccgg 11197020  T
Q  374 aggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |     || |||||||| ||||||||||||||| ||||||||||||||||||||    
T  11197021 a-----tggatattccgatcactttaattttattatatatttttgtaggcatta 11197069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 75 - 427
Target Start/End: Original strand, 17949082 - 17949419
Alignment:
Q  75 tagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctct 174  Q
    |||||||| ||||||||||| | ||||||||| |||||||||| ||||| ||||||||||| | || | | ||||| ||||| |||||| ||||||||||    
T  17949082 tagttttctctctctaggttgtctcttacagtttcttcattgatgggtgattttgggtcaattattgacctgaaatcacccc-tcttcacctttttctct 17949180  T
Q  175 ctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcg 274  Q
    ||| ||||||||||||||| |||||||||| | || | |          |||||||||||||||||||||||| |||||||||||            |||    
T  17949181 ctatttcaatctaaataagcgattttcacatagatcttgatttttttatttgtgatttcatcatctaagtgtgatggtttgttgt------------gcg 17949268  T
Q  275 gcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgga 374  Q
    ||||||||||||||  | |||| ||  |||||| |||| |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  17949269 gcgttgtttgatttgccgtcttcgtgtggtgttcattttattcatattgaaagatcgattattcaatcagagatttgggcgtcaacgttccagatccgga 17949368  T
Q  375 ggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||| ||||| ||||||||||||||||||||||||  |||||||||||||    
T  17949369 ggccatggatattacggtcactttaattttatcatata--tttgtaggcatta 17949419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 84 - 427
Target Start/End: Original strand, 33342281 - 33342620
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    ||||||||||||||||||  ||| |||||||||| ||||||||||||||||| |||| | | ||||| ||||| |||||||| |||| ||||||||||||    
T  33342281 ctctctaggttttttcttcgagtttcttcattgaggggtggttttgggtcaatttttaacctgaaatcacccc-tcttcatccttttttctctaattcaa 33342379  T
Q  184 tctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtt 282  Q
    ||||||||||||||||| |||| | || ||||       | | |||||||| ||| | |||||||||||| |||||||| |||| || ||||||||| ||    
T  33342380 tctaaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcgtcacccaagtgtggtggtgtgttgttcttcgtcttatgcggcgttttt 33342478  T
Q  283 tgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatga 382  Q
    ||||||| | | ||  | ||||||||||||||||||||||||| |||| |||||||||||||||| |||  ||||| ||||||||||| |||||| ||||    
T  33342479 tgatttcccgtattgttgcggtgtttatttgattcatattgaa-gatcaattattcaatcaaagaattggacgtca-cgttgcagatctggaggc-atga 33342575  T
Q  383 atattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
     ||||| |||||||||||||||||||||||| |||||||||||||    
T  33342576 gtattcaggtcactttaattttatcatatatatttgtaggcatta 33342620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 224 - 427
Target Start/End: Original strand, 29777202 - 29777405
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| |||| | ||||  | ||||||| |||| |||| |||||    
T  29777202 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacattgtttgctttcccgtcttcttgcggtgttcattttattcctattg 29777301  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 423  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||| ||||| |||||||||| |||||||| |||||||||||||||| ||||    
T  29777302 aaagatcgattattcaatcaaagatttggacgtcaacattgcagatccggagaccatggatattccggtgactttaatattatcatatatttttggaggc 29777401  T
Q  424 atta 427  Q
    ||||    
T  29777402 atta 29777405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 167 - 420
Target Start/End: Complemental strand, 43192503 - 43192252
Alignment:
Q  167 ttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 266  Q
    ||||||||||| ||||||||||||||||| |||| ||| | || ||||       | | |||||||||||||||||||||||||||||||||||||||||    
T  43192503 ttttctctctatttcaatctaaataagtggtttttacatagatctaggtttttt-cttcgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 43192405  T
Q  267 attgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgca 366  Q
     |||||||||||||||||||||  | ||||  |  |||||| ||||||||||| |||||||||||||||||| |||||| ||||| | ||||||||||||    
T  43192404 cttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaaagatcgattattcgatcaaatatttgggtgtcaacgttgca 43192305  T
Q  367 gatccggaggccatgaatattccggtcactttaattttatcatatatttttgta 420  Q
    |||||||| | ||||||||||||| |||||||||||||||||||||||||||||    
T  43192304 gatccgga-gacatgaatattccgatcactttaattttatcatatatttttgta 43192252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 84 - 427
Target Start/End: Original strand, 28239676 - 28240027
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaaggg-tggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattca 182  Q
    ||||||||||||| |||| || | |||||||||| ||| || ||||||||||| |||| | | ||||| ||| | |||||||||||||||||||| ||||    
T  28239676 ctctctaggttttctcttccattttcttcattgagggggtgattttgggtcaatttttgacctgaaatcacctc-tcttcatctttttctctctatttca 28239774  T
Q  183 atctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgt 281  Q
    ||||||||||||| |||| |||| | || ||||       |   | |||||| |||| | ||||||| ||||||||||||||||| ||||||||||||||    
T  28239775 atctaaataagtgttttttcacatagatctaggttttct-ctacgcgatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgt 28239873  T
Q  282 ttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc---- 377  Q
    |||||| ||| | ||  | ||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||        
T  28239874 ttgattcctcgtattgttgcggtgttcatttgattaatattgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccggaggcatgg 28239973  T
Q  378 ----catgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
        ||||  |||||||||||||||||||||||||| |||||||||| ||||||    
T  28239974 aagacatgggtattccggtcactttaattttatcatttatttttgtaagcatta 28240027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 166 - 427
Target Start/End: Complemental strand, 37566038 - 37565777
Alignment:
Q  166 tttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcg 265  Q
    ||||| |||||| |||||||||||||| ||||||||||| | || ||||       | ||| |||||||||||||||||||||||||||||| |||||||    
T  37566038 tttttatctctatttcaatctaaataattgattttcacatagatttaggtttttttctttgagatttcatcatctaagtgtggtggtttgttattcgtcg 37565939  T
Q  266 tattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgc 365  Q
    | ||||||||| |||||||||||  | || | || ||| ||| |||||||||||||||||||||   | ||||||| ||||||||| |||| ||||||||    
T  37565938 tcttgtgcggcattgtttgattttccttcgtcgtgcggcgttcatttgattcatattgaaagataagtaattcaattaaagatttgggcgttaacgttgc 37565839  T
Q  366 agatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||| | || ||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  37565838 agatccgaatgcgatggatattccggtcactttgattttatcatatatttttgtaggcatta 37565777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 262 - 427
Target Start/End: Complemental strand, 23851557 - 23851392
Alignment:
Q  262 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 361  Q
    ||||| ||||||| |||||||||||||| | |||| || ||||||| |||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  23851557 gtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttggacgtcaacg 23851458  T
Q  362 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||| ||| ||||| |||| |||||||||| |||||||||||||||||||||||    
T  23851457 ttgcagatccggaggcaatggatatttcggtaactttaatttcatcatatatttttgtaggcatta 23851392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 172 - 427
Target Start/End: Original strand, 33298787 - 33299040
Alignment:
Q  172 tctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgt 271  Q
    ||||||||||||||||||||||||||||||||| | || ||||       | |||||||||| ||||| |||| | ||||| |||||||| |||| ||||    
T  33298787 tctctaattcaatctaaataagtgattttcacatagatctaggttttac-ctttgtgatttcgtcatccaagtctagtggtgtgttgttcatcgtcttgt 33298885  T
Q  272 gcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    | || ||||||||||||||| ||||  | ||||||| ||||||||||||| ||||||  ||||||||||| |||||||||  |||||||||||||||| |    
T  33298886 gtggtgttgtttgatttctcgtcttgctgcggtgttcatttgattcatatcgaaagagtgattattcaattaaagatttggtcgtcaacgttgcagatac 33298985  T
Q  372 ggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||| | ||||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  33298986 ggatg-catgagtattctagtcactttaattttatcatatatttttataggcatta 33299040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 158 - 427
Target Start/End: Original strand, 16794210 - 16794477
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgatttt-cacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgt 256  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||       | | ||||||||||||||  || |||||| | |||    
T  16794210 tcttcatctttttctctctaattcaatctaaataagtgatttttcacataaatctaggttttt--cttcgtgatttcatcatccgagagtggtgttatgt 16794307  T
Q  257 tgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgt 356  Q
    |||||||||| ||||||  ||| |||||||||| | | ||  ||||||||| |||||||||||||||||||||| |||||||||||||||| |||| | |    
T  16794308 tgttcgtcgtcttgtgcaacgtcgtttgatttcccgtattgttacggtgttcatttgattcatattgaaagatcaattattcaatcaaagaattgaacat 16794407  T
Q  357 caacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||  || ||| ||||  ||||| ||||  | |||||||||||||||||||||||| |||||    
T  16794408 caacgttgcagaatcgaagg-catgggtattctggtctatataattttatcatatatttttgtagacatta 16794477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 84 - 427
Target Start/End: Complemental strand, 27747352 - 27747013
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    ||||||||||||| |||| ||   |||||||| | |||| |||||||||||| |||| |   ||||| |||   ||||||||||||| |||| | |||||    
T  27747352 ctctctaggttttctcttccaacttcttcattaaggggtagttttgggtcaatttttgacttgaaatcaccat-tcttcatctttttatctccatttcaa 27747254  T
Q  184 tctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgttt 283  Q
    | ||||||||| ||||||||| ||||||| |       | | ||||||||| |||||  |||||||||| ||||||||||| | ||||||| |  |||||    
T  27747253 tttaaataagtaattttcacataaatataagtttttt-cttcgtgatttcaccatctgggtgtggtggtgtgttgttcgtcatcttgtgcgacagtgttt 27747155  T
Q  284 gatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaa 383  Q
    ||||||   | ||  | ||||||| |||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||||||||| | ||||      
T  27747154 gatttcctgttttgttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgggcatcaacgttgtagatccggatg-catggg 27747056  T
Q  384 tattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  27747055 tattccggtcactttta-tttatcatatatttttgtaggcatta 27747013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 226 - 427
Target Start/End: Complemental strand, 39153241 - 39153040
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    |||||||| |||||  ||||||||||| ||||||||||||| |||||  |||||||| |||||| | ||||  |||| | || |||||||||| ||||||    
T  39153241 gtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtcgcgttgttcgatttcgcgtcttgttacgattttcatttgattcacattgaa 39153142  T
Q  326 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatata-tttttgtaggca 424  Q
    |||| ||||||||||| ||| ||||| | |||| ||||||||||||||||| ||||  ||||||| ||||||||||||||||||||| ||||||||||||    
T  39153141 agattgattattcaattaaaaatttgggtgtcagcgttgcagatccggagg-catgggtattccgatcactttaattttatcatatattttttgtaggca 39153043  T
Q  425 tta 427  Q
    |||    
T  39153042 tta 39153040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 226 - 427
Target Start/End: Original strand, 15046879 - 15047078
Alignment:
Q  226 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 325  Q
    |||||||| |||||  ||||||||||| ||||||||||||| |||||||| | |||||||||||   |||| || || ||||||||||||| ||||||||    
T  15046879 gtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgctgtttgatttcctgtcttggtgcgatgtttatttgattgatattgaa 15046978  T
Q  326 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 425  Q
    | ||||||| | |||| |||| ||||  |||||||||||||||||| |||| ||||  ||||||| | ||||||||||||||||||||||||||||||||    
T  15046979 aaatcgatt-tccaataaaagttttggacgtcaacgttgcagatccagagg-catgtgtattccgattactttaattttatcatatatttttgtaggcat 15047076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 74 - 427
Target Start/End: Complemental strand, 15597417 - 15597066
Alignment:
Q  74 ctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctc 173  Q
    ||||||||  |||| |||||||| |||| |||| | || ||||| ||||||||||  ||||| |||| | | ||||| ||||| |||||||||||||||     
T  15597417 ctagttttttctctataggttttctcttccagtatttttattgaggggtggttttcagtcaatttttgacctgaaatcacccc-tcttcatctttttcta 15597319  T
Q  174 -tctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtg 272  Q
     || | |||||||||||||||||||||||||| | || ||||       | |  ||||||| |||||  ||||| ||||| ||||||| ||||| |||||    
T  15597318 gtccatttcaatctaaataagtgattttcacatagatctaggtttttt-cttcatgatttcgtcatccgagtgtagtggtgtgttgtttgtcgtcttgtg 15597220  T
Q  273 cggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccg 372  Q
     ||| ||| |||||||  | | ||  ||||||||| |||||||||||||| || ||||| |||||||||| ||||||||||||||||||||| ||||||     
T  15597219 aggccttggttgattttccgttttgttacggtgttcatttgattcatattaaacgatcggttattcaatcgaagatttgagcgtcaacgttgtagatcca 15597120  T
Q  373 gaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
     | | |||  ||||| |||||||||||||||| ||||||| ||||||| ||||||    
T  15597119 ta-gtcatagatatttcggtcactttaattttctcatatacttttgtatgcatta 15597066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 303 - 427
Target Start/End: Complemental strand, 43135600 - 43135477
Alignment:
Q  303 gtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatt 402  Q
    ||||| || ||||||||| |||| ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| |||||||||||||    
T  43135600 gtgttcatctgattcatagtgaa-gatcgattattcaatcaaagatttgggcgtcaacgtttcagatccggaagccatgtatattctggtcactttaatt 43135502  T
Q  403 ttatcatatatttttgtaggcatta 427  Q
    |||||||||||||| ||||||||||    
T  43135501 ttatcatatattttcgtaggcatta 43135477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 330
Target Start/End: Original strand, 36532894 - 36532986
Alignment:
Q  238 tctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    |||| |||||||| | ||||||||||||| |||||||| ||||||||||||||||| ||  |  |||||||||||| ||| ||||||||||||    
T  36532894 tctaggtgtggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttctcattttgttttggtgtttatttggttcctattgaaagatc 36532986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 193
Target Start/End: Original strand, 29777054 - 29777181
Alignment:
Q  65 aagtcggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcat 164  Q
    |||||||| ||| ||||| ||||||||||||| || | | || |||||||||  | ||||||||||||||| | || |   ||||| || || |||||||    
T  29777054 aagtcggccctaattttctctctctaggttttctcatcctgtttcttcattggtgagtggttttgggtcaattattgacatgaaatcactcc-tcttcat 29777152  T
Q  165 ctttttctctctaattcaatctaaataag 193  Q
    ||||||||||||| |||||||||||||||    
T  29777153 ctttttctctctatttcaatctaaataag 29777181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 411
Target Start/End: Original strand, 35812723 - 35812830
Alignment:
Q  303 gtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatt 402  Q
    ||||||||||||||||||||||||||||| ||||||||| || ||||||  ||| ||||||| |||| |  | | ||||| |||| | || |||||||||    
T  35812723 gtgtttatttgattcatattgaaagatcggttattcaattaatgatttggacgttaacgttgaagatac-aaagacatgagtatttcagtgactttaatt 35812821  T
Q  403 ttatcatat 411  Q
    |||||||||    
T  35812822 ttatcatat 35812830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 318
Target Start/End: Original strand, 10148099 - 10148138
Alignment:
Q  279 tgtttgatttctcatcttagtacggtgtttatttgattca 318  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10148099 tgtttgatttctcatcttagtacggtgtttatttgattca 10148138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 8443639 - 8443579
Alignment:
Q  227 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatt 287  Q
    ||||||| || |||||||| |||| | ||||||||||||| ||||||||||||||||||||    
T  8443639 tgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatt 8443579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 330
Target Start/End: Original strand, 5333391 - 5333493
Alignment:
Q  228 gatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaag 327  Q
    |||||| |||||| |||| |||| | ||||||||||||| |||||||| ||||||||||||  | ||||  | |||||||  |||| ||| |||||||||    
T  5333391 gatttcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaaag 5333490  T
Q  328 atc 330  Q
    |||    
T  5333491 atc 5333493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 411
Target Start/End: Original strand, 14913137 - 14913246
Alignment:
Q  301 cggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaa 400  Q
    ||||||| |||||||||  || |||||||| || | |||||||| ||||||||| ||||| ||||| ||  |||||| |||  ||||||| |||| ||||    
T  14913137 cggtgttcatttgattctgatcgaaagatcaataaatcaatcaatgatttgagcatcaacattgcatattgggaggc-atgtgtattccgatcaccttaa 14913235  T
Q  401 ttttatcatat 411  Q
    |||||||||||    
T  14913236 ttttatcatat 14913246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 329
Target Start/End: Complemental strand, 30026857 - 30026807
Alignment:
Q  279 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| | ||||||| ||||||||||||||||||| |||||||||    
T  30026857 tgtttgatttcccgtcttagtgcggtgtttatttgattcatgttgaaagat 30026807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 411
Target Start/End: Complemental strand, 7677278 - 7677214
Alignment:
Q  346 gatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||| ||||   |||||||||||    
T  7677278 gatttgagcgtcaacgttgcagatccggaag-catgaatatttcggtgacttaggttttatcatat 7677214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 200
Target Start/End: Original strand, 18733852 - 18733980
Alignment:
Q  72 ctctagttttcactctctaggttttttcttacagtgtcttcattgaag-ggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttttt 170  Q
    ||||||||||| ||||||||||  | |||| || | |||| ||||| | ||||||| ||||||||||||||| | ||||| |     |||||||||||||    
T  18733852 ctctagttttctctctctaggtcctctcttccattttctttattgaggaggtggttgtgggtcaaatttttaaccgaaatcagtat-tcttcatcttttt 18733950  T
Q  171 ctctctaattcaatctaaataagtgatttt 200  Q
    ||||||| |||||| ||||||| |||||||    
T  18733951 ctctctatttcaatttaaataattgatttt 18733980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 427
Target Start/End: Original strand, 11267162 - 11267194
Alignment:
Q  395 ctttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||||||||||||||||    
T  11267162 ctttaattttatcatatatttttgtaggcatta 11267194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 24099356 - 24099284
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 326  Q
    |||||||||||||  ||| | ||||||||||||||| ||||||  | ||||||| ||||| ||||||||||||    
T  24099356 tgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcatattgaaa 24099284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 28297080 - 28297032
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||||||    
T  28297080 tttgatttcccatcttagtgcggtgtttatttgattcaggttgaaagat 28297032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 39657440 - 39657480
Alignment:
Q  256 ttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 296  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  39657440 ttgttcgtcgtcttgtgcggcgttgtttgatttcgcatctt 39657480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 471172 - 471133
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccgga 374  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  471172 attcaatcaatgatttgtgcgtcaacgttgcagatccgga 471133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 7883369 - 7883314
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    |||||||||| ||||||||||| || | | ||||||||||||| ||||||||||||    
T  7883369 ttgtgatttcgtcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 7883314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 23230604 - 23230659
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    |||||||||| || |||||||| || | ||||||||||||||| ||||||||||||    
T  23230604 ttgtgatttcgtcgtctaagtgcggcgatttgttgttcgtcgtcttgtgcggcgtt 23230659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 370
Target Start/End: Complemental strand, 27110471 - 27110436
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatc 370  Q
    |||||||||| |||||||||||||||||||||||||    
T  27110471 attcaatcaatgatttgagcgtcaacgttgcagatc 27110436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 37971244 - 37971299
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    |||||||||| || |||||||| || | ||||||||||||||| ||||||||||||    
T  37971244 ttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 37971299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 29617375 - 29617301
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 328  Q
    ||||||||||||| |||||||||| ||||||||||| | ||||  | |||||||  |||| ||| ||||||||||    
T  29617375 tgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaaga 29617301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 10334332 - 10334377
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaa 326  Q
    |||||| |||| ||||||| |||||||||||||||||| |||||||    
T  10334332 tttgatctctcgtcttagtgcggtgtttatttgattcagattgaaa 10334377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 25241767 - 25241718
Alignment:
Q  160 ttcatctttttctctctaattcaatctaaataagtgattttcacaaaaat 209  Q
    ||||||||||||| |||| |||||||| ||||||||||| ||||| ||||    
T  25241767 ttcatctttttctttctatttcaatctcaataagtgattgtcacataaat 25241718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 1236797 - 1236722
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    |||||||||| || |||||||||||||||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  1236797 tgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatc 1236722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 1239497 - 1239422
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    |||||||| |||| |||||||||||||||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  1239497 tgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatc 1239422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 2025185 - 2025149
Alignment:
Q  293 tcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  2025185 tcttagtgcggtgtttatttgattcagattgaaagat 2025149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 3204758 - 3204710
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| ||||||| | ||||||||||||||||  |||||||||    
T  3204758 tttgatttctcgtcttagtgcagtgtttatttgattcaagttgaaagat 3204710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 12184356 - 12184447
Alignment:
Q  319 tattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    |||||||| ||||| ||||| ||||| |||||| |||||| |||||| ||| ||||||| ||   ||||| || || ||||||||||||||||    
T  12184356 tattgaaaaatcgactattccatcaatgatttgggcgtcaccgttgctgattcggaggc-atatgtattctggacattttaattttatcatat 12184447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 12428784 - 12428875
Alignment:
Q  319 tattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    |||||||| ||||| ||||| ||||| |||||| |||||| |||||| ||| ||||||| ||   ||||| || || ||||||||||||||||    
T  12428784 tattgaaaaatcgactattccatcaatgatttgggcgtcaccgttgctgattcggaggc-atatgtattctggacattttaattttatcatat 12428875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 15344297 - 15344372
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| ||||||||||| |||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  15344297 tgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatc 15344372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 15433362 - 15433437
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| ||||||||||| |||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  15433362 tgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatc 15433437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 15524666 - 15524741
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 330  Q
    ||||||||||||| ||||||||||| |||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  15524666 tgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatc 15524741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 18890705 - 18890669
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatcc 371  Q
    |||||||||| |||||| |||||||||||||||||||    
T  18890705 attcaatcaatgatttgggcgtcaacgttgcagatcc 18890669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 37612809 - 37612857
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  37612809 tttgatttcccgtcttagtgcggtgtttatttgattcaagttgaaagat 37612857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 38546114 - 38546078
Alignment:
Q  293 tcttagtacggtgtttatttgattcatattgaaagat 329  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  38546114 tcttagtacgatgtttatttgattcagattgaaagat 38546078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 43937150 - 43937102
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  43937150 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 43937102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 152; Significance: 3e-80; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 158 - 427
Target Start/End: Complemental strand, 16489 - 16218
Alignment:
Q  158 tcttcatctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnn--ccttgtgatttcatcatctaagtgtggtggtttg 255  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||| | || ||||         | ||||||||||||||||||||||||||||||||    
T  16489 tcttcatctgtttctctctatttcaatctaaataagtgattttcacatagatttaggtttttttttctttgtgatttcatcatctaagtgtggtggtttg 16390  T
Q  256 ttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcg 355  Q
    ||||| ||||| ||||||||||||||||||| |||  | || |  ||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||    
T  16389 ttgtttgtcgtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattcatattaaaatatcgattattcaatcaaagatttgggcg 16290  T
Q  356 tcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  16289 tcaacgttgcagatccggaggctatggatattccggtcactttaattttattatatatttttgtaggcatta 16218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 150; Significance: 4e-79; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 85 - 427
Target Start/End: Original strand, 5237 - 5577
Alignment:
Q  85 tctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaat 184  Q
    |||||||||||| |||| | || |||||||||  ||||||||||||||||| | || | | ||||| ||||| ||||||||||| |||||||| ||||||    
T  5237 tctctaggttttctcttcccgtttcttcattgg-gggtggttttgggtcaattcttgacctgaaatcacccc-tcttcatctttctctctctacttcaat 5334  T
Q  185 ctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttg 284  Q
    |||||||||||| ||| ||| | || || |       | ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||    
T  5335 ctaaataagtgacttttacatatatctatgtttttttctttgtgatttcatcatttaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttg 5434  T
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaat 384  Q
     |||| | ||||  |  |||||| |||| |||  ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||| ||    
T  5435 ctttcccgtcttcttgtggtgttcattttatttctattgaaagattgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatggat 5534  T
Q  385 attccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  5535 attccggtgactttaattttatcatatatttttgtaggcatta 5577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 143; Significance: 6e-75; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 162 - 425
Target Start/End: Complemental strand, 201534 - 201273
Alignment:
Q  162 catctttttctctctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttc 261  Q
    ||||||||||||| || |||||||||||||||||||||||||| | || |||        | |||||||||||||||||||||||| |||||||||||||    
T  201534 catctttttctctatatttcaatctaaataagtgattttcacatagatctag-attttttctttgtgatttcatcatctaagtgtgatggtttgttgttc 201436  T
Q  262 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 361  Q
    || || |||||||||| ||||||||||| | ||||  |  |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  201435 gtagtcttgtgcggcgctgtttgatttcacgtcttcttgtggtgttcatttgattcatattgaa-gatcgattattcaatcaaagatttgggcgtcaacg 201337  T
Q  362 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 425  Q
    ||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  201336 ttgtagatccgtaggccatggatattccggtcactttaattttatcatatatttttgtaggcat 201273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 138; Significance: 6e-72; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 75 - 427
Target Start/End: Complemental strand, 362043 - 361697
Alignment:
Q  75 tagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctct 174  Q
    |||||||| |||| |||||||| ||||||||| |||||||||| ||||||||||| ||||| | || | | ||||| ||||| ||| |||||||||||||    
T  362043 tagttttctctctttaggttttctcttacagtttcttcattgaggggtggttttgagtcaattcttgacctgaaatcacccc-tctccatctttttctct 361945  T
Q  175 ctaattcaatctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcg 274  Q
     |  |||||||||||||||| ||||||||| | |  ||||         ||||||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  361944 at--ttcaatctaaataagtaattttcacatagagttaggtttttt---ttgtgatttcatcatttaagtatggtggtttgttgttcgtcgtcttgtgcg 361850  T
Q  275 gcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgga 374  Q
    |||||||||||||||   |||| || | ||||| ||||||||| ||  |||||||  ||||||||||||||||||||  ||||||||||| |||||||||    
T  361849 gcgttgtttgatttcctgtcttggtgcagtgttcatttgattcttacagaaagattaattattcaatcaaagatttggacgtcaacgttgtagatccgga 361750  T
Q  375 ggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    ||||||| ||| ||| |||||||||||||| ||||||||||||||||||||||    
T  361749 ggccatggatactccagtcactttaattttctcatatatttttgtaggcatta 361697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 224 - 425
Target Start/End: Complemental strand, 83536 - 83338
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 323  Q
    ||||||||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||| |||| || |||| || |||||||||||||||    
T  83536 ttgtgatttcatcatctaagtgtggtggtttgttgtttgtc---ttgtgcggcgttgtttgatttctcgtcttcgtgcggtattcatttgattcatattg 83440  T
Q  324 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 423  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||| | |||| |||| || |||||||||||||||||||| |||| ||||||||||||    
T  83439 aaagatcgattattcaatcgaagatttggccgtcaacgttgcagattcagaggtcatggattttccggtcactttaattttaccatacatttttgtaggc 83340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 120; Significance: 3e-61; HSPs: 2)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 236 - 427
Target Start/End: Original strand, 6293 - 6484
Alignment:
Q  236 catctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgatta 335  Q
    ||||| ||||||||||||||||||||||||| |||| |||| |||||||||||| | ||||  | ||||||| |||||||||||||||||||||||||||    
T  6293 catcttagtgtggtggtttgttgttcgtcgtcttgtacggcattgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcgatta 6392  T
Q  336 ttcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||| ||||| || ||||||||||||||||  |||||||||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  6393 ttcaatcaaatatttgggcatcaacgttgcagatccaaaggccatgaataatccggtcactttagttttatcatatatttttgtatgcatta 6484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 6161 - 6294
Alignment:
Q  69 cggctctagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatcttt 168  Q
    |||| ||| ||||| |||| |||||||| |||| |||| |||||||||| |||||||||  |||||| | || | |  |||| ||||| |||||||||||    
T  6161 cggccctaattttctctctttaggttttctcttccagtttcttcattga-gggtggtttcaggtcaattcttgacctaaaatcacccc-tcttcatcttt 6258  T
Q  169 ttctctctaattcaatctaaataagtgattttcaca 204  Q
    || |||||| | ||||||||||||||||||||||||    
T  6259 ttttctctattccaatctaaataagtgattttcaca 6294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 106; Significance: 7e-53; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 302 - 427
Target Start/End: Original strand, 8745 - 8870
Alignment:
Q  302 ggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaat 401  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  8745 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggagaccatggatattctggtcactttaat 8844  T
Q  402 tttatcatatatttttgtaggcatta 427  Q
    ||||||||||||||||||||||||||    
T  8845 tttatcatatatttttgtaggcatta 8870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 260
Target Start/End: Original strand, 8557 - 8731
Alignment:
Q  84 ctctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttatcggaaattaccccctcttcatctttttctctctaattcaa 183  Q
    ||||| ||||||| |||| |||| |||||||||| |||||||||||||| || | || |   ||||| ||||| | ||||||||||| |||||| |||||    
T  8557 ctctccaggttttctcttccagtttcttcattgaggggtggttttgggttaattcttaacttgaaatcacccctt-ttcatctttttatctctatttcaa 8655  T
Q  184 tctaaataagtgattttcacaaaaatataggnnnnnnnccttgtgatttcatcatctaagtgtggtggtttgttgtt 260  Q
    ||||||||||||||||||||| | || ||||       | |||||||||||||||||||||||||||||||||||||    
T  8656 tctaaataagtgattttcacatagatctagg-ttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 8731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 373
Target Start/End: Complemental strand, 36758 - 36639
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 353  Q
    ||||||||||||| |||||||| ||||||||||||||  ||||  |  |||| ||||||| ||||||||||||||| ||  ||||||||||  |||||||    
T  36758 tgttgttcgtcgtcttgtgcggagttgtttgatttcttttcttgttgtggtgattatttggttcatattgaaagattgacaattcaatcaataatttgag 36659  T
Q  354 cgtcaacgttgcagatccgg 373  Q
    ||||||| ||||||||||||    
T  36658 cgtcaacattgcagatccgg 36639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 309 - 426
Target Start/End: Complemental strand, 34796 - 34681
Alignment:
Q  309 atttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatca 408  Q
    |||||||||||||||||||||| | ||| ||||||| |||||  |||||||||||||| ||||||| | ||||| | |||| ||||||||||||||||||    
T  34796 atttgattcatattgaaagatctactatgcaatcaatgatttatgcgtcaacgttgcaaatccgga-gacatgagttttccagtcactttaattttatca 34698  T
Q  409 tatatttttgtaggcatt 426  Q
    ||| | ||||||||||||    
T  34697 tat-tatttgtaggcatt 34681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 20493 - 20433
Alignment:
Q  228 gatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgattt 288  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  20493 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgattt 20433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 346
Target Start/End: Original strand, 453928 - 454030
Alignment:
Q  244 tgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctca-tcttagtacggtgtttatttgattcatattgaaagatcgattattcaatc 342  Q
    |||| |||| ||||||||||||| ||| ||||||||||||||||| ||| ||||  | ||||||| |||||| |||||||||||||||||||||||||||    
T  453928 tgtgatggtgtgttgttcgtcgtcttgggcggcgttgtttgattt-tcagtcttgttgcggtgttcatttgactcatattgaaagatcgattattcaatc 454026  T
Q  343 aaag 346  Q
    ||||    
T  454027 aaag 454030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 427
Target Start/End: Original strand, 454056 - 454092
Alignment:
Q  391 gtcactttaattttatcatatatttttgtaggcatta 427  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  454056 gtcactttaattttattatatatttttgtaagcatta 454092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 70 - 130
Alignment:
Q  75 tagttttcactctctaggttttttcttacagtgtcttcattgaagggtggttttgggtcaa 135  Q
    |||||||| |||||||| |||| ||||||||| ||| |||||| |||||||||||||||||    
T  70 tagttttctctctctagcttttctcttacagtttctccattgaggggtggttttgggtcaa 130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 6016 - 6088
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 326  Q
    ||||||||||||| |||||||||||||||||||||| | | ||  | ||||||| ||||| ||||||||||||    
T  6016 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaaa 6088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 15450 - 15505
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    |||||||||| ||||||||||| |||| | ||||||||||||| ||||||||||||    
T  15450 ttgtgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 15505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 50857 - 50946
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 426  Q
    |||||| ||| ||||||  ||||||||||||||||||||| | |||| ||||| |||| |||| | ||||||||||| | ||||||||||||    
T  50857 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catggatatttcggtgacttaagttttatcatat-tatttgtaggcatt 50946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 32877 - 32822
Alignment:
Q  224 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 279  Q
    |||||||||| || |||||||| || | ||||||||||||||| ||||||||||||    
T  32877 ttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 32822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 296
Target Start/End: Complemental strand, 1785 - 1743
Alignment:
Q  254 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 296  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||    
T  1785 tgttgttcgtcgtcttgtccggcgttgtttgatttcgcatctt 1743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 3054 - 3104
Alignment:
Q  279 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||||| | | ||||||||||||||||||||||||  |||||||||    
T  3054 tgtttgatttcccgttttagtacggtgtttatttgattcaggttgaaagat 3104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 131 - 179
Alignment:
Q  281 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||||||| ||||||||| | ||||||||||||||||  |||||||||    
T  131 tttgatttcccatcttagtgctgtgtttatttgattcaggttgaaagat 179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 411
Target Start/End: Complemental strand, 31282 - 31207
Alignment:
Q  335 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 411  Q
    |||||||||| ||||||||| |||| |||||||||||||| | ||||  |||| |||| ||||  ||||||||||||    
T  31282 attcaatcaacgatttgagcatcaatgttgcagatccggaag-catgggtatttcggtgacttagattttatcatat 31207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 74324 - 74368
Alignment:
Q  285 atttctcatcttagtacggtgtttatttgattcatattgaaagat 329  Q
    ||||| ||||||||||||| ||||||||||||||  |||||||||    
T  74324 atttcacatcttagtacggagtttatttgattcaggttgaaagat 74368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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