View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8180A_low_113 (Length: 293)
Name: NF8180A_low_113
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8180A_low_113 |
 | |
|
| [»] scaffold2013 (1 HSPs) |
| | |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 48 - 278
Target Start/End: Original strand, 41767806 - 41768036
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctt |
147 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
41767806 |
tatctctcttaatataagaagagaaaatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctt |
41767905 |
T |
|
| Q |
148 |
taacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcat |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41767906 |
taacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcat |
41768005 |
T |
|
| Q |
248 |
ttccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
41768006 |
ttccatttgatgccaactaaataaatccgat |
41768036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 49 - 278
Target Start/End: Complemental strand, 11166994 - 11166765
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11166994 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctgattaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
11166895 |
T |
|
| Q |
149 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11166894 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
11166795 |
T |
|
| Q |
249 |
tccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
11166794 |
tccatttgatgccaactaaataaatccgat |
11166765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 49 - 278
Target Start/End: Original strand, 37381550 - 37381779
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
148 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37381550 |
atctctattaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
37381649 |
T |
|
| Q |
149 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37381650 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
37381749 |
T |
|
| Q |
249 |
tccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
37381750 |
tccatttgatgccaactaaataaatccgat |
37381779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 50 - 278
Target Start/End: Complemental strand, 46388049 - 46387821
Alignment:
| Q |
50 |
tctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttta |
149 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
46388049 |
tctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatttgtcttta |
46387950 |
T |
|
| Q |
150 |
acttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcattt |
249 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46387949 |
acttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcattt |
46387850 |
T |
|
| Q |
250 |
ccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
46387849 |
ccatttgatgccaactaaataaatccgat |
46387821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 49 - 278
Target Start/End: Complemental strand, 4297378 - 4297149
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
148 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4297378 |
atctctcttgatataagaagagaagatgttgtggaaatcctattaatgccccagtctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
4297279 |
T |
|
| Q |
149 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4297278 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
4297179 |
T |
|
| Q |
249 |
tccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
| |||||||||||||||||||||||||||| |
|
|
| T |
4297178 |
tacatttgatgccaactaaataaatccgat |
4297149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 50 - 242
Target Start/End: Complemental strand, 7733723 - 7733531
Alignment:
| Q |
50 |
tctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttta |
149 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7733723 |
tctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttta |
7733624 |
T |
|
| Q |
150 |
acttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaa |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7733623 |
acttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaa |
7733531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 49 - 278
Target Start/End: Original strand, 50985594 - 50985817
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50985594 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
50985693 |
T |
|
| Q |
149 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| | |||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50985694 |
aacttactttattcaaccaaattaccacaaataa-----aatctgtc-tttaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
50985787 |
T |
|
| Q |
249 |
tccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
50985788 |
tccatttgatgccaactaaataaatccgat |
50985817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 51 - 242
Target Start/End: Original strand, 7698840 - 7699029
Alignment:
| Q |
51 |
ctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctttaa |
150 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
7698840 |
ctctcttaatataagaagagaagatgttgtggaa-tcctattaatgccccagcctggttaattgacaaatcac-aaagtaagggtaaaatctgtctttaa |
7698937 |
T |
|
| Q |
151 |
cttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaa |
242 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7698938 |
cttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaa |
7699029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 7731107 - 7731070
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
7731107 |
tatctctcttaatataagaagagaagatattgtggaaa |
7731070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 85
Target Start/End: Original strand, 41771182 - 41771215
Alignment:
| Q |
52 |
tctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
41771182 |
tctcttaatataagaagagaagatgttgtggaaa |
41771215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 46323258 - 46323221
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
46323258 |
tatctctcttaatataagaagggaagatgttgtggaaa |
46323221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 226; Significance: 1e-124; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 49 - 278
Target Start/End: Original strand, 13098273 - 13098502
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13098273 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
13098372 |
T |
|
| Q |
149 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13098373 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
13098472 |
T |
|
| Q |
249 |
tccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
13098473 |
cccatttgatgccaactaaataaatccgat |
13098502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 49 - 274
Target Start/End: Complemental strand, 29609192 - 29608967
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
148 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
29609192 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctagttaattgacaaatcaccaaagtaagggtaaaatttgtcttt |
29609093 |
T |
|
| Q |
149 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29609092 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
29608993 |
T |
|
| Q |
249 |
tccatttgatgccaactaaataaatc |
274 |
Q |
| |
|
|||||||||||||||| ||||||||| |
|
|
| T |
29608992 |
tccatttgatgccaacaaaataaatc |
29608967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 1074224 - 1074290
Alignment:
| Q |
57 |
taatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcac |
123 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| | ||| | |||||| |||||||||||| |
|
|
| T |
1074224 |
taatataagaagagaagatgttgtggaaaatctattattaccctatgctggttggttgacaaatcac |
1074290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 56 - 278
Target Start/End: Complemental strand, 42375221 - 42374999
Alignment:
| Q |
56 |
ttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctttaacttac |
155 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42375221 |
ttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctttaacttac |
42375122 |
T |
|
| Q |
156 |
tttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatttccattt |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42375121 |
tttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatttccattt |
42375022 |
T |
|
| Q |
256 |
gatgccaactaaataaatccgat |
278 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
42375021 |
gatgccaactaaataaatccgat |
42374999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 56 - 278
Target Start/End: Complemental strand, 42403935 - 42403713
Alignment:
| Q |
56 |
ttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctttaacttac |
155 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42403935 |
ttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctttaacttac |
42403836 |
T |
|
| Q |
156 |
tttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatttccattt |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42403835 |
tttattcaaccaaattaccacaattaactaagatgatgtcatataactacaaataactaatagtttagttcatttgctcttcataaagtcatttccattt |
42403736 |
T |
|
| Q |
256 |
gatgccaactaaataaatccgat |
278 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
42403735 |
gatgccaactaaataaatccgat |
42403713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 49 - 248
Target Start/End: Complemental strand, 26066997 - 26066798
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26066997 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
26066898 |
T |
|
| Q |
149 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26066897 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
26066798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 49 - 278
Target Start/End: Original strand, 12007168 - 12007398
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
12007168 |
atctctcttaatataagaagagaagatgttgtggaaatcctattcatgccccaacctggttaattgacaaatcaccaaagtaatggtaaaatctgtcttt |
12007267 |
T |
|
| Q |
149 |
-aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcat |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12007268 |
taacttactttattcaaccaaattaccacaattcactaagttgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcat |
12007367 |
T |
|
| Q |
248 |
ttccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |
|
|
| T |
12007368 |
ttccatttgatgtcaactaaataaatccgat |
12007398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 205
Target Start/End: Original strand, 52275643 - 52275800
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggtt-aattgacaaatcaccaaagtaagggtaaaatctgtctt |
147 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| | ||||| |||||| ||| |||||||| || | ||||||||| ||||| |
|
|
| T |
52275643 |
atctctcttaatataagaagagaagatgttgtggaaaacctattattaccccaagctggttggcttgccaaatcacacaattgagggtaaaagttgtctg |
52275742 |
T |
|
| Q |
148 |
taacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactac |
205 |
Q |
| |
|
|| |||||||||| ||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
52275743 |
aaaattactttattgaactaaatgaccacaattaactatgatgatgtcatgtaactac |
52275800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 54760426 - 54760575
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctt |
147 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| | ||| | | |||| |||||||||||| || | ||||||||| |||| | |
|
|
| T |
54760426 |
tatctctcttaatataagaagagaagatgttgtggaaaatctattattaccctatgccggttggttgacaaatcacataattgagggtaaaagttgtcct |
54760525 |
T |
|
| Q |
148 |
taacttactttattcaaccaaattaccacaattaactaagatgatgtcat |
197 |
Q |
| |
|
|| |||||||||| ||| |||| |||| || |||||| ||||||||||| |
|
|
| T |
54760526 |
aaaattactttattgaactaaatgaccataactaactacgatgatgtcat |
54760575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 15280061 - 15279965
Alignment:
| Q |
104 |
ctggttaattgacaaatcaccaaagtaagggtaaaatctgtctttaacttactttattcaaccaaattaccacaattaactaagatgatgtcatgta |
200 |
Q |
| |
|
|||||| |||||||||||| ||| ||| ||||||| |||||| ||| |||||||| |||||||||| |||| | ||||||| ||||||||||||| |
|
|
| T |
15280061 |
ctggtttattgacaaatcagcaagttaaaggtaaaagctgtctataaattactttaatcaaccaaataaccatgaataactaacatgatgtcatgta |
15279965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 21631379 - 21631416
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
21631379 |
tatctctcttaatgtaagaagagaagatgttgtagaaa |
21631416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 48 - 278
Target Start/End: Complemental strand, 20407735 - 20407504
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctt |
147 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20407735 |
tatctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctt |
20407636 |
T |
|
| Q |
148 |
taacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcat-aaagtca |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
20407635 |
taacttactttattcaaccaaattaccacaattaaccaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaaagtca |
20407536 |
T |
|
| Q |
247 |
tttccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
20407535 |
tttccatttgatgccaactaaataaatccgat |
20407504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 20405128 - 20405091
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20405128 |
tatctctcttaatataagaagagaagatgttgtggaaa |
20405091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 125650 - 125614
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
125650 |
atctctcttaatataagaagagaagatgttgtggaaa |
125614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 85
Target Start/End: Original strand, 34992316 - 34992349
Alignment:
| Q |
52 |
tctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
34992316 |
tctcttaatataagaagagaagatgttgtggaaa |
34992349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 216; Significance: 1e-118; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 49 - 278
Target Start/End: Complemental strand, 36040850 - 36040624
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36040850 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
36040751 |
T |
|
| Q |
149 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
36040750 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataac---tagtttagttcatttgctcttcataaagtcatt |
36040654 |
T |
|
| Q |
249 |
tccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
36040653 |
tccatttgatgccaactaaataaatccgat |
36040624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 204
Target Start/End: Original strand, 54959897 - 54960052
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
148 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| | || | | || ||| |||||||| || | | ||||||| ||||| |
|
|
| T |
54959897 |
atctctcttaatataagaagagaagatgttgtggaaaatctattattatcctaacttgagggcttgtcaaatcacacaattgaaggtaaaagttgtctaa |
54959996 |
T |
|
| Q |
149 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaacta |
204 |
Q |
| |
|
|| |||||||||| || |||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
54959997 |
aaattactttattgtactaaatgaccacaattaactatgatgatgtcatgtaacta |
54960052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 37082651 - 37082688
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37082651 |
tatctctcttaatataagaagagaagatgttgtggaaa |
37082688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 14198528 - 14198564
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |
|
|
| T |
14198528 |
atctctcttaatataagaagggaagatgttgtggaaa |
14198564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 266
Target Start/End: Original strand, 14198608 - 14198746
Alignment:
| Q |
129 |
taagggtaaaatctgtctttaacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcat |
228 |
Q |
| |
|
|||||||||| | |||||| || ||||||| | ||| |||| ||| || ||||||| |||||||||| |||||| ||| | || ||||||| || || |
|
|
| T |
14198608 |
taagggtaaattttgtcttaaaattactttttctaactaaatgacctcacttaactactatgatgtcatttaactataaaaagcttatagtttgatttat |
14198707 |
T |
|
| Q |
229 |
tt-gctcttcataaagtcatttccatttgatgccaacta |
266 |
Q |
| |
|
|| |||||||| ||||||| ||||||| |||||||||| |
|
|
| T |
14198708 |
tttgctcttcaaaaagtcagttccattacatgccaacta |
14198746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 25 - 278
Target Start/End: Original strand, 37741932 - 37742188
Alignment:
| Q |
25 |
tgcatagtcagctggcccaggggtatctctcttaat---ataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatc |
121 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37741932 |
tgcatagtgagctcgcccaggggtatctctcttaataatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatc |
37742031 |
T |
|
| Q |
122 |
accaaagtaagggtaaaatctgtctttaacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagttt |
221 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37742032 |
accaaagtaaaggtaaaatctgtctttaacttactttattcaactaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagttt |
37742131 |
T |
|
| Q |
222 |
agttcatttgctcttcataaagtcatttccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| |
|
|
| T |
37742132 |
agttcatttgctcttcataaaatcattttcatttgatgccacctaaataaatccgat |
37742188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 48 - 278
Target Start/End: Complemental strand, 44843360 - 44843130
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctt |
147 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
44843360 |
tatctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccaacctggttaattgacaaatcaccaaagtaagggtaaaatttgtctt |
44843261 |
T |
|
| Q |
148 |
taacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcat |
247 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44843260 |
taacttactttattcaaccaaattacaacaattaactaagatgatgtcatgtaactataaataactaatagtttagttcatttgctcttcataaagtcat |
44843161 |
T |
|
| Q |
248 |
ttccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
44843160 |
ttccatttgatgccaactaaataaatccgat |
44843130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 28130784 - 28130614
Alignment:
| Q |
109 |
taattgacaaatcaccaaagtaagggtaaaatctgtctttaacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaa |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28130784 |
taattgacaaatcaccaaagtaagggtaaaatctcgctttaacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaa |
28130685 |
T |
|
| Q |
209 |
taactaatagtttagttcatttgctcttcat-aaagtcatttccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28130684 |
taactaatagtttagttcatttgctcttcataaaagtcatttccatttgatgccaactaaataaatccgat |
28130614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 28130868 - 28130785
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaa |
131 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28130868 |
tatctctcttaataaaagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaa |
28130785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 49 - 278
Target Start/End: Complemental strand, 46373555 - 46373333
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
148 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
46373555 |
atctctcttaatataaga---gaagatgttgtggaaatcctattaatgccccaacctggttaattgacaaatcaccaaag----ggtaaaatctgtcttt |
46373463 |
T |
|
| Q |
149 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
248 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46373462 |
aacttactttattcaaacaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
46373363 |
T |
|
| Q |
249 |
tccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
46373362 |
tccatttgatgccaactaaataaatccgat |
46373333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 48 - 172
Target Start/End: Complemental strand, 29054727 - 29054603
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctt |
147 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29054727 |
tatctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctt |
29054628 |
T |
|
| Q |
148 |
taacttactttattcaaccaaatta |
172 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
29054627 |
taacttactttattcaaccaaatta |
29054603 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 22883021 - 22882968
Alignment:
| Q |
152 |
ttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactac |
205 |
Q |
| |
|
|||||||||| ||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
22883021 |
ttactttattgaactaaatgaccacaattaactatgatgatgtcatgtaactac |
22882968 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 46369707 - 46369670
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46369707 |
tatctctcttaatataagaagagaagatgttgtggaaa |
46369670 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 34346837 - 34346801
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34346837 |
atctctcttaatataagaagagaagatgttgtggaaa |
34346801 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 22883089 - 22883053
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22883089 |
atctctcttaatataagaagggaagatgttgtggaaa |
22883053 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 49 - 278
Target Start/End: Complemental strand, 18273248 - 18273019
Alignment:
| Q |
49 |
atctctcttaatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtcttt |
148 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||| ||||||||| || || |||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
18273248 |
atctctcttaatataaaaagataagatgttgtggaaattctattaatgtcctggcttggttaattgacaaatcatcaaagtaagggtaaaatctgtcttt |
18273149 |
T |
|
| Q |
149 |
aacttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactacaaataactaatagtttagttcatttgctcttcataaagtcatt |
248 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
18273148 |
aatttactttattcaaccaaattaccacaattaactaagatgatgtcatgtaactataaagaattaatagtttagttcatttgctcttcataaagtcatt |
18273049 |
T |
|
| Q |
249 |
tccatttgatgccaactaaataaatccgat |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
18273048 |
tccatttgatgccaactaaataaatccgat |
18273019 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 204
Target Start/End: Original strand, 5325873 - 5326020
Alignment:
| Q |
57 |
taatataagaagagaagatgttgtggaaatcctattaatgccccagcctggttaattgacaaatcaccaaagtaagggtaaaatctgtctttaacttact |
156 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| | ||| | | |||| |||||||||||| || | ||||||||| |||| | || ||||| |
|
|
| T |
5325873 |
taatataagaagagaagatgttgtggaaaatctattattaccctatgccggttggttgacaaatcacataattgagggtaaaagttgtcctaaaattact |
5325972 |
T |
|
| Q |
157 |
ttattcaaccaaattaccacaattaactaagatgatgtcatgtaacta |
204 |
Q |
| |
|
||||| ||| |||| |||| || |||||| ||||||||||| |||||| |
|
|
| T |
5325973 |
ttattgaactaaatgaccataactaactacgatgatgtcatataacta |
5326020 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 30698640 - 30698603
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30698640 |
tatctctcttaatataagaagagaagatgttgtggaaa |
30698603 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold2013
Description:
Target: scaffold2013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 721 - 758
Alignment:
| Q |
48 |
tatctctcttaatataagaagagaagatgttgtggaaa |
85 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
721 |
tatctctcttaatataagaagagaagatgttgtggaaa |
758 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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