View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8180A_low_118 (Length: 289)
Name: NF8180A_low_118
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8180A_low_118 |
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Alignment Details
Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 19173339 - 19173478
Alignment:
| Q |
4 |
gaatatgctagatgagtatgtagggttcgacctagaataaaattgatggaaaaagggcatgtaacccaacaaagaaacaaaaaactaaaatcaccgaaca |
103 |
Q |
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| T |
19173339 |
gaatatgctagatgagtatgtagggttcgacctagaataaaattgatggaaaaagggcatgtaacccaacaaagaaacaaaaaactaaaatcacccaaca |
19173438 |
T |
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| Q |
104 |
aggagaaggaagtaaactttgaaataacataaagaatact |
143 |
Q |
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| T |
19173439 |
aggagaaggaagtaaactttgaaataacataaaaaatact |
19173478 |
T |
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