View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8180A_low_130 (Length: 283)
Name: NF8180A_low_130
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8180A_low_130 |
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Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 261
Target Start/End: Complemental strand, 37035382 - 37035140
Alignment:
| Q |
18 |
aattgacctataagccatacgattgtacatctatcacctaacccaagccactgtgttcttaacttgtatcgaatccatgtacttcaacaggatgaatacg |
117 |
Q |
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| T |
37035382 |
aattgacctataagctatacgattgtacatctatcacctaacccaagccactgtgttcttaacttgtatcgactccatgtacttcaacaggatgaatacg |
37035283 |
T |
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| Q |
118 |
tttgattatctaaaaatgtaagtattggacataagaacacggaataagacataagacacattactaacttttattatattgaacaannnnnnnnnatctt |
217 |
Q |
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| T |
37035282 |
tttgattatctaaaaatgtaagtattggacataagaacacggaataagacataagacacattactaactttaattatattgaacaa-ttttttttatctt |
37035184 |
T |
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| Q |
218 |
agacgacgatccttggtggataaaagtctatttgggtattttat |
261 |
Q |
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| T |
37035183 |
agacgacgatccttggtggataaaagtctatttgggtattttat |
37035140 |
T |
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