View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8180A_low_144 (Length: 276)
Name: NF8180A_low_144
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8180A_low_144 |
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Alignment Details
Target: chr1 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 4 - 261
Target Start/End: Original strand, 46613170 - 46613427
Alignment:
| Q |
4 |
gagtttggtgtttcaatcccacttgaaaatagaatgcatcatttttatcctttcacttcattccacccatttcttcaatctttcaagcaacttggcaatt |
103 |
Q |
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| T |
46613170 |
gagtttggtgtttcaatcccacttgaaaatagaatgcatcatttttatcctttcacttcattccacccatttcttcaatctttcaagcaacttggcaatt |
46613269 |
T |
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| Q |
104 |
tctggatgatcatgctaatgagaagaaagaacaacattgattctccacatgtgaacattgataccgcatcgcttcctctaaattccagttcttcatcatg |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
46613270 |
tctggatgatcatgctaatgagaagaaagaacaacattgattctccacatgtgaacattgataccgcatcgcttcctctaaattccagttcttcgtcatg |
46613369 |
T |
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| Q |
204 |
atcttgctccttttcattgtgcctcaagcatccattgctccatctcaagtatatatat |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46613370 |
atcttgctccttttcattgtgcctcaagcatccattgctccatctcaagtatatatat |
46613427 |
T |
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