View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8180A_low_160 (Length: 265)
Name: NF8180A_low_160
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8180A_low_160 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 9 - 265
Target Start/End: Original strand, 44640621 - 44640877
Alignment:
| Q |
9 |
aacatagacaaaaagtcgcaaccaagttttgcatgaaaatacggggaaaacatgtctatttttagtagcattttgatgtttgcttcagtttaaatttatt |
108 |
Q |
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| T |
44640621 |
aacagagacaaaaagtcgcaaccaagttttgcatgaaaatccggggaaaacatgtctatttttagtagcattttgatgtttgcttcagtttaaatttatt |
44640720 |
T |
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| Q |
109 |
caaataagacggagtatcatttcaagtgaattgagtagcagacgttaatcactaacgtgattaagtgatgagtcttgtgaaaaatatttaaacagcaaat |
208 |
Q |
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| T |
44640721 |
cgaataagacggagtatcatttcaagtgaattgagtagcagacgttaatcactaacgtgattaagtgatgagtcttgtgaaaaatatttaaacagcaaat |
44640820 |
T |
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| Q |
209 |
aacaatatttataataactagatagatgcatataaaattgtgaatgtcataaagtga |
265 |
Q |
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| T |
44640821 |
aacaatatttataataactagatagatgcatataaaattgtgaatgtcataaagtga |
44640877 |
T |
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