View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8180A_low_227 (Length: 246)

Name: NF8180A_low_227
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8180A_low_227
NF8180A_low_227
[»] scaffold0016 (2 HSPs)
scaffold0016 (91-233)||(40574-40716)
scaffold0016 (23-93)||(14097-14167)
[»] chr7 (17 HSPs)
chr7 (93-229)||(32094407-32094543)
chr7 (18-91)||(34132814-34132887)
chr7 (18-93)||(22346865-22346940)
chr7 (18-96)||(28415145-28415223)
chr7 (18-92)||(34139126-34139200)
chr7 (18-91)||(13270879-13270952)
chr7 (18-89)||(43906101-43906172)
chr7 (18-92)||(1858559-1858633)
chr7 (18-91)||(18779057-18779130)
chr7 (29-91)||(6852016-6852078)
chr7 (52-91)||(42631285-42631324)
chr7 (53-91)||(15683152-15683190)
chr7 (33-91)||(23878702-23878760)
chr7 (52-93)||(9460443-9460484)
chr7 (47-91)||(794081-794125)
chr7 (59-91)||(7528871-7528903)
chr7 (33-93)||(8810063-8810123)
[»] scaffold0167 (1 HSPs)
scaffold0167 (18-93)||(7978-8053)
[»] scaffold0027 (2 HSPs)
scaffold0027 (18-93)||(23581-23656)
scaffold0027 (33-92)||(397-456)
[»] chr5 (22 HSPs)
chr5 (18-93)||(36448247-36448322)
chr5 (18-91)||(20092745-20092818)
chr5 (18-91)||(25532868-25532941)
chr5 (23-93)||(23378298-23378368)
chr5 (18-91)||(20099642-20099715)
chr5 (18-91)||(20639855-20639928)
chr5 (18-93)||(15956974-15957049)
chr5 (18-89)||(26186641-26186712)
chr5 (18-91)||(25526188-25526261)
chr5 (18-91)||(36454627-36454700)
chr5 (18-91)||(40014876-40014949)
chr5 (18-91)||(37048344-37048417)
chr5 (18-80)||(25042273-25042335)
chr5 (52-91)||(21688153-21688192)
chr5 (52-91)||(21696072-21696111)
chr5 (52-91)||(26553292-26553331)
chr5 (33-91)||(11939621-11939679)
chr5 (52-93)||(17947982-17948023)
chr5 (60-93)||(21808311-21808344)
chr5 (54-91)||(29901229-29901266)
chr5 (33-93)||(11953545-11953605)
chr5 (47-91)||(25677884-25677928)
[»] chr4 (21 HSPs)
chr4 (18-93)||(20548379-20548454)
chr4 (23-91)||(20555005-20555073)
chr4 (18-93)||(50187781-50187856)
chr4 (29-91)||(19738012-19738074)
chr4 (18-91)||(3382437-3382510)
chr4 (18-91)||(3389185-3389258)
chr4 (35-92)||(39745430-39745487)
chr4 (33-91)||(22175845-22175903)
chr4 (34-88)||(3439629-3439683)
chr4 (17-95)||(4619216-4619294)
chr4 (18-92)||(25984368-25984442)
chr4 (52-97)||(13100664-13100709)
chr4 (34-91)||(15580490-15580547)
chr4 (34-91)||(39534175-39534232)
chr4 (48-92)||(55793251-55793295)
chr4 (47-94)||(10220457-10220504)
chr4 (29-91)||(14924997-14925059)
chr4 (53-91)||(15880072-15880110)
chr4 (18-93)||(47522573-47522650)
chr4 (52-92)||(12427135-12427175)
chr4 (52-92)||(41148978-41149018)
[»] scaffold0290 (1 HSPs)
scaffold0290 (18-92)||(22045-22119)
[»] chr6 (23 HSPs)
chr6 (18-92)||(12667530-12667604)
chr6 (18-91)||(28702880-28702953)
chr6 (23-91)||(18960994-18961062)
chr6 (18-101)||(20459451-20459534)
chr6 (18-92)||(19713679-19713753)
chr6 (23-91)||(20452655-20452723)
chr6 (18-92)||(14176923-14176996)
chr6 (18-91)||(22779132-22779205)
chr6 (23-91)||(19719836-19719904)
chr6 (18-92)||(17784063-17784137)
chr6 (35-91)||(26896467-26896523)
chr6 (18-91)||(19898950-19899023)
chr6 (23-83)||(10985072-10985132)
chr6 (34-101)||(22631684-22631751)
chr6 (52-92)||(24150082-24150122)
chr6 (52-91)||(19169106-19169145)
chr6 (52-91)||(24143592-24143631)
chr6 (33-91)||(615926-615984)
chr6 (33-91)||(623827-623885)
chr6 (29-91)||(15666268-15666330)
chr6 (55-93)||(20058867-20058905)
chr6 (34-92)||(21961606-21961664)
chr6 (52-93)||(8275502-8275543)
[»] chr2 (15 HSPs)
chr2 (18-92)||(20279324-20279398)
chr2 (18-93)||(38084460-38084535)
chr2 (18-91)||(18281-18354)
chr2 (23-92)||(11873681-11873750)
chr2 (18-91)||(18500226-18500299)
chr2 (18-92)||(36735332-36735406)
chr2 (18-93)||(5874244-5874319)
chr2 (18-91)||(5871103-5871176)
chr2 (18-69)||(29586096-29586147)
chr2 (34-93)||(12370462-12370521)
chr2 (23-91)||(22518960-22519028)
chr2 (47-92)||(25036877-25036922)
chr2 (47-92)||(25040984-25041029)
chr2 (52-93)||(39649664-39649705)
chr2 (53-93)||(13038973-13039013)
[»] scaffold0001 (1 HSPs)
scaffold0001 (18-91)||(96782-96855)
[»] chr8 (19 HSPs)
chr8 (18-91)||(14891854-14891927)
chr8 (18-92)||(22162979-22163053)
chr8 (18-92)||(25859267-25859341)
chr8 (23-92)||(15061333-15061402)
chr8 (18-91)||(20733160-20733233)
chr8 (18-91)||(22156970-22157043)
chr8 (18-92)||(32025646-32025720)
chr8 (18-91)||(20725198-20725271)
chr8 (18-91)||(20738096-20738169)
chr8 (18-91)||(32006734-32006806)
chr8 (29-91)||(25853033-25853095)
chr8 (18-92)||(31999762-31999836)
chr8 (41-92)||(24487931-24487982)
chr8 (34-83)||(6030856-6030905)
chr8 (33-91)||(12307679-12307737)
chr8 (55-93)||(45469472-45469510)
chr8 (52-93)||(18433028-18433069)
chr8 (52-92)||(15707137-15707177)
chr8 (52-92)||(23267953-23267993)
[»] chr3 (34 HSPs)
chr3 (18-91)||(261364-261437)
chr3 (18-91)||(13111779-13111852)
chr3 (18-91)||(14893138-14893211)
chr3 (23-92)||(16031256-16031325)
chr3 (18-91)||(21638553-21638626)
chr3 (29-91)||(4313598-4313660)
chr3 (18-92)||(14888033-14888107)
chr3 (18-91)||(13105631-13105704)
chr3 (18-91)||(14881307-14881380)
chr3 (18-91)||(23288114-23288187)
chr3 (23-91)||(30102449-30102517)
chr3 (18-91)||(68145-68218)
chr3 (18-91)||(74238-74311)
chr3 (18-91)||(11180760-11180833)
chr3 (30-91)||(48060734-48060795)
chr3 (18-90)||(12550412-12550484)
chr3 (18-91)||(3404752-3404825)
chr3 (18-91)||(8612622-8612695)
chr3 (18-93)||(8606160-8606235)
chr3 (32-91)||(49967354-49967413)
chr3 (33-89)||(37470141-37470197)
chr3 (34-91)||(13086554-13086611)
chr3 (23-91)||(30068675-30068743)
chr3 (48-91)||(18706267-18706310)
chr3 (29-91)||(13509417-13509479)
chr3 (33-91)||(20603997-20604055)
chr3 (52-94)||(21607449-21607491)
chr3 (33-91)||(37256102-37256160)
chr3 (33-91)||(37265938-37265996)
chr3 (52-93)||(15537758-15537799)
chr3 (52-92)||(11630009-11630049)
chr3 (55-91)||(15610518-15610554)
chr3 (56-92)||(33814598-33814634)
chr3 (52-92)||(46371171-46371211)
[»] chr1 (17 HSPs)
chr1 (18-91)||(19367475-19367548)
chr1 (18-91)||(35070035-35070108)
chr1 (18-93)||(20429351-20429426)
chr1 (18-93)||(44832548-44832623)
chr1 (18-91)||(1961638-1961711)
chr1 (18-91)||(18098375-18098448)
chr1 (18-91)||(22116343-22116416)
chr1 (18-92)||(47108372-47108446)
chr1 (18-80)||(1955829-1955891)
chr1 (41-91)||(2336072-2336122)
chr1 (48-93)||(16884516-16884561)
chr1 (34-93)||(39454379-39454438)
chr1 (53-92)||(22840176-22840215)
chr1 (52-93)||(20979997-20980038)
chr1 (23-91)||(13450035-13450103)
chr1 (41-93)||(20518279-20518331)
chr1 (52-92)||(25926805-25926845)
[»] scaffold1922 (1 HSPs)
scaffold1922 (18-92)||(208-282)
[»] scaffold0150 (1 HSPs)
scaffold0150 (18-92)||(38591-38665)
[»] scaffold0085 (1 HSPs)
scaffold0085 (18-92)||(7791-7865)
[»] scaffold0473 (1 HSPs)
scaffold0473 (18-91)||(9155-9228)
[»] scaffold0320 (1 HSPs)
scaffold0320 (18-91)||(6313-6386)
[»] scaffold0050 (1 HSPs)
scaffold0050 (18-91)||(27708-27781)
[»] scaffold0028 (1 HSPs)
scaffold0028 (18-91)||(65838-65911)
[»] scaffold0351 (1 HSPs)
scaffold0351 (18-93)||(7633-7708)
[»] scaffold0306 (1 HSPs)
scaffold0306 (18-91)||(15644-15717)
[»] scaffold0253 (2 HSPs)
scaffold0253 (18-91)||(10339-10412)
scaffold0253 (18-91)||(19764-19837)
[»] scaffold0046 (1 HSPs)
scaffold0046 (23-92)||(86694-86763)
[»] scaffold0630 (1 HSPs)
scaffold0630 (18-82)||(1370-1434)
[»] scaffold0039 (1 HSPs)
scaffold0039 (18-89)||(89866-89937)
[»] scaffold0328 (1 HSPs)
scaffold0328 (18-92)||(169-243)
[»] scaffold0029 (2 HSPs)
scaffold0029 (41-91)||(38088-38138)
scaffold0029 (52-93)||(20210-20251)
[»] scaffold0441 (1 HSPs)
scaffold0441 (34-93)||(2469-2528)
[»] scaffold0505 (1 HSPs)
scaffold0505 (34-91)||(11470-11527)
[»] scaffold0458 (1 HSPs)
scaffold0458 (34-93)||(9280-9339)
[»] scaffold1888 (1 HSPs)
scaffold1888 (34-93)||(1058-1117)
[»] scaffold0755 (1 HSPs)
scaffold0755 (52-91)||(963-1002)
[»] scaffold0378 (3 HSPs)
scaffold0378 (53-92)||(3335-3374)
scaffold0378 (53-92)||(15815-15854)
scaffold0378 (53-91)||(770-808)
[»] scaffold0101 (1 HSPs)
scaffold0101 (53-92)||(16565-16604)
[»] scaffold0094 (1 HSPs)
scaffold0094 (48-91)||(30722-30765)
[»] scaffold0068 (2 HSPs)
scaffold0068 (52-91)||(17799-17838)
scaffold0068 (52-91)||(25718-25757)
[»] scaffold0023 (1 HSPs)
scaffold0023 (36-91)||(150634-150689)
[»] scaffold0582 (1 HSPs)
scaffold0582 (47-91)||(391-435)
[»] scaffold0435 (1 HSPs)
scaffold0435 (47-91)||(8394-8438)
[»] scaffold0431 (1 HSPs)
scaffold0431 (52-92)||(2800-2840)
[»] scaffold0182 (1 HSPs)
scaffold0182 (52-92)||(1714-1754)


Alignment Details
Target: scaffold0016 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 91 - 233
Target Start/End: Complemental strand, 40716 - 40574
Alignment:
Q  91 aattggtatttgcgattttttgctacaaattctggttttgatatatgggaatgtacgtggaaaaattgtgactgttaagtttttgatgaagttttctaag 190  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40716 aattggtattagcgattttttgctacaaattctggttttgatatatgggaatgtacgtggaaaagttgtgactgttaagtttttgatgaagttttctaag 40617  T
Q  191 aatttagcctgtgcttaggctgtttcagatcatggtgatgtcc 233  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  40616 aatttagcctatgcttaggctgtttcagatcatggtgatgtcc 40574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 14167 - 14097
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  14167 aatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgaggtatgacaat 14097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 229
Target Start/End: Complemental strand, 32094543 - 32094407
Alignment:
Q  93 ttggtatttgcgattttttgctacaaattctggttttgatatatgggaatgtacgtggaaaaattgtgactgttaagtttttgatgaagttttctaagaa 192  Q
    |||||||| ||| |||| | | |||||||||||||||||||||||||||| ||| | ||||| ||||| ||||||||| |||||||||||||||||||||    
T  32094543 ttggtattagcgtttttgtcccacaaattctggttttgatatatgggaatctacatagaaaagttgtgcctgttaagtgtttgatgaagttttctaagaa 32094444  T
Q  193 tttagcctgtgcttaggctgtttcagatcatggtgat 229  Q
    |||||||| ||||| ||||||||| ||||||||||||    
T  32094443 tttagcctatgcttgggctgtttctgatcatggtgat 32094407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 34132814 - 34132887
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34132814 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 34132887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 22346940 - 22346865
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  22346940 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggacaaaaattggggtatgacaat 22346865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 28415223 - 28415145
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaattgg 96  Q
    |||| ||||| ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  28415223 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagcggggccttaggtaaaaaattggggtatgacaattgg 28415145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 34139126 - 34139200
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  34139126 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggagccttagatcaaaaattggggtatgacaa 34139200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 13270879 - 13270952
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||    
T  13270879 tgaaaaatcagagatcgatcagactcgagtgacatgtgtcagtggggccttaggtcaaaaattggaatatgaca 13270952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 43906172 - 43906101
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatga 89  Q
    |||| ||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||    
T  43906172 tgaaaaatcagagatcgatcaggatcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatga 43906101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 1858559 - 1858633
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| |||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1858559 tgaaaaatcagagattgatcatagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 1858633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 18779057 - 18779130
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  18779057 tgaaaaatcagagatcgattagagtcgagtgacatgtgtcagcggggccttaggtcaaaaattggggtatgaca 18779130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 6852016 - 6852078
Alignment:
Q  29 agatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||||||||||| || | |||||||||||||| |||||||| |||||||||| |||||||    
T  6852016 agatcgatcagagtcgagcggcatgtgtcagtgggaccttaggttaaaaattggggtatgaca 6852078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 42631285 - 42631324
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  42631285 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 42631324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 15683190 - 15683152
Alignment:
Q  53 gtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  15683190 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 15683152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 23878702 - 23878760
Alignment:
Q  33 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||| ||||||||||| |||||||||||  ||| |||||||| ||||| |||||||    
T  23878702 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 23878760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 9460484 - 9460443
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    ||||||||||| |||||||||||||| ||||| |||||||||    
T  9460484 tgtgtcagtggagccttaggtcaaaatttggggtatgacaat 9460443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 794081 - 794125
Alignment:
Q  47 tgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  794081 tgacacgtgtcagtgctgtcttaggtcaaaaattgggatatgaca 794125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 91
Target Start/End: Original strand, 7528871 - 7528903
Alignment:
Q  59 gtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||| |||||||||||||||||||||||||||    
T  7528871 gtgggaccttaggtcaaaaattgggatatgaca 7528903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 8810123 - 8810063
Alignment:
Q  33 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    ||||||| |||||||||||  ||||||||||  ||| |||||||| ||||| |||||||||    
T  8810123 cgatcagggtcaagtgacacatgtcagtgggatcttgggtcaaaatttggggtatgacaat 8810063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 8053 - 7978
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8053 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaat 7978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 23656 - 23581
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23656 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaat 23581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 397 - 456
Alignment:
Q  33 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    ||||||| ||||||||||| |||||||||||  ||| |||||||| ||||| ||||||||    
T  397 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgacaa 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 36448322 - 36448247
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36448322 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaat 36448247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 20092745 - 20092818
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20092745 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 20092818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 25532941 - 25532868
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25532941 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 25532868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 23378298 - 23378368
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  23378298 aatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgaggtatgacaat 23378368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 20099642 - 20099715
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  20099642 tgaaaaatcagagatcgatcagagtcaagtgacatgtgttagtggggccttaggtcaaaaattggggtatgaca 20099715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 20639855 - 20639928
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  20639855 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 20639928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 15956974 - 15957049
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  15956974 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaattggggtatgacaat 15957049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 26186641 - 26186712
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatga 89  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  26186641 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatga 26186712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 25526261 - 25526188
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||    
T  25526261 tgaaaaatcagagatcgatcagattcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 25526188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 36454700 - 36454627
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  36454700 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtccgtgaggccttaggtcaaaaattggggtatgaca 36454627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 40014949 - 40014876
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  40014949 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgggaccttaagtcaaaaattggggtatgaca 40014876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 37048417 - 37048344
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||  ||||||||||||||| || |||||||    
T  37048417 tgaaaaatcagagatcgatcagagtcaagtgacacgtgtcagtgggatcttaggtcaaaaatttgggtatgaca 37048344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 25042273 - 25042335
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 80  Q
    |||| ||||| ||||||| ||||||||||||||| || ||||||| |||||||||||||||||    
T  25042273 tgaaaaatcagagatcgaacagagtcaagtgacacgtatcagtggagccttaggtcaaaaatt 25042335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 21688192 - 21688153
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  21688192 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 21688153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 21696111 - 21696072
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  21696111 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 21696072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 26553292 - 26553331
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  26553292 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 26553331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 11939621 - 11939679
Alignment:
Q  33 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||| ||||||||||| |||||||||||  ||| |||||||| ||||| |||||||    
T  11939621 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 11939679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 17948023 - 17947982
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||||||||||| ||||||||||||| ||||| |||||||||    
T  17948023 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaat 17947982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 21808311 - 21808344
Alignment:
Q  60 tggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| |||||||||||||||||||||||||||||    
T  21808311 tgggaccttaggtcaaaaattgggatatgacaat 21808344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 29901266 - 29901229
Alignment:
Q  54 tgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  29901266 tgtcagtgggaccttaggtcaaaaattggggtatgaca 29901229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 11953545 - 11953605
Alignment:
Q  33 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    ||||||| ||||||||||| |||||||||||  ||| | |||||| ||||| |||||||||    
T  11953545 cgatcagggtcaagtgacacgtgtcagtgggaacttggatcaaaatttggggtatgacaat 11953605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 25677884 - 25677928
Alignment:
Q  47 tgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||||||| ||| | ||||||||||||||||||| |||||||    
T  25677884 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatgaca 25677928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 20548454 - 20548379
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20548454 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaat 20548379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 20555073 - 20555005
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20555073 aatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 20555005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 50187856 - 50187781
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50187856 tgaaaaatcagagattgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaat 50187781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 19738012 - 19738074
Alignment:
Q  29 agatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19738012 agatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 19738074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 3382437 - 3382510
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  3382437 tgaaaaatcagagatcgagcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 3382510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 3389185 - 3389258
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| |||||||||||  || ||||||||||||||||||||||||||||||||||||||| |||||||    
T  3389185 tgaaaaatcaaagatcgatcagtatcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 3389258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 39745430 - 39745487
Alignment:
Q  35 atcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39745430 atcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 39745487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 22175845 - 22175903
Alignment:
Q  33 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  22175845 cgatcagggtcaagtgacacgtgtcagtggggccttaggtcaaaaattggggtatgaca 22175903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 3439683 - 3439629
Alignment:
Q  34 gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatg 88  Q
    |||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  3439683 gatcagtgtcaaatgacatgcgtcagtgggaccttaggtcaaaaattgggatatg 3439629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 4619294 - 4619216
Alignment:
Q  17 gtgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaattg 95  Q
    ||||| ||||| |||| |||||| || || ||||||||||||||||    ||||||||||||||||| |||||||||||    
T  4619294 gtgaaaaatcagagattgatcagggttaaatgacatgtgtcagtggtattttaggtcaaaaattggggtatgacaattg 4619216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 25984442 - 25984368
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| ||||| ||||| |||||  |||| ||||||||||| |||||||| |||||||||| ||||||||    
T  25984442 tgaaaaatcagagatcaatcagcgtcaaacgacacgtgtcagtgggaccttaggttaaaaattggggtatgacaa 25984368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 13100709 - 13100664
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaattggt 97  Q
    |||||||||||||||||||||||||| ||||| ||||||| |||||    
T  13100709 tgtgtcagtggggccttaggtcaaaatttggggtatgacagttggt 13100664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 15580490 - 15580547
Alignment:
Q  34 gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||| ||||| ||||||| |||||||||  |||||||||||||||||| |||||||    
T  15580490 gatcagggtcaaatgacatgcgtcagtgggatcttaggtcaaaaattggggtatgaca 15580547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 39534232 - 39534175
Alignment:
Q  34 gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||||||| ||||| |||||||||||  ||| |||||||||||||| |||||||    
T  39534232 gatcagagtcaaatgacacgtgtcagtgggatcttgggtcaaaaattggggtatgaca 39534175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 55793251 - 55793295
Alignment:
Q  48 gacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||    
T  55793251 gacaagtgtcagtgggaccttaggtcaaaaattggggtatgacaa 55793295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 10220457 - 10220504
Alignment:
Q  47 tgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaatt 94  Q
    ||||| |||||||||  |||||||||||||||||||| ||||||||||    
T  10220457 tgacacgtgtcagtgctgccttaggtcaaaaattggggtatgacaatt 10220504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 14925059 - 14924997
Alignment:
Q  29 agatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| |||||| || ||| |||| ||||||||||| |||||||| |||||||||| |||||||    
T  14925059 agattgatcagggttaagcgacacgtgtcagtgggaccttaggtaaaaaattggggtatgaca 14924997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 15880072 - 15880110
Alignment:
Q  53 gtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  15880072 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 15880110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 47522573 - 47522650
Alignment:
Q  18 tgaagaatcacagatcgatcagagtc--aagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| ||||| ||||||||   ||||||||  ||| |||||| ||||||||||||||||| |||||||||||    
T  47522573 tgaaaaatcagagatcaatcagagtgttaagtgacaaatgttagtgggaccttaggtcaaaaattgagatatgacaat 47522650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 12427175 - 12427135
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||||||||||| ||||||||||||| ||||| ||||||||    
T  12427175 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaa 12427135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 41149018 - 41148978
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||||||||||| ||||||||||||| ||||| ||||||||    
T  41149018 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaa 41148978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 22119 - 22045
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22119 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 22045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 12667530 - 12667604
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12667530 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 12667604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 28702880 - 28702953
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28702880 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 28702953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 18960994 - 18961062
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18960994 aatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 18961062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 20459451 - 20459534
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaattggtattt 101  Q
    |||| ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  20459451 tgaaaaatcagagatcaatcagagtcaagtgacatgtgtcactggggccttaggtcaaaaattggggtatgacaattggcattt 20459534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 19713753 - 19713679
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19713753 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 19713679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 20452655 - 20452723
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  20452655 aatcagagatcgatcagagtcaagtgacatgtgtcagtggagccttaggtcaaaaattggggtatgaca 20452723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 14176996 - 14176923
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14176996 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggg-tatgacaa 14176923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 22779132 - 22779205
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||    
T  22779132 tgaaaaatcagagatcgatcagagtcaagtgacacgtgtcagtggggcattaggtcaaaaattggggtatgaca 22779205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 19719904 - 19719836
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  19719904 aatcagagatcaatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 19719836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 17784063 - 17784137
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||    
T  17784063 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggagccttaggtcaaaaattggtgtatgacaa 17784137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 26896523 - 26896467
Alignment:
Q  35 atcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  26896523 atcagagttaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 26896467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 19899023 - 19898950
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||| ||||||||| ||||||||||| |||||||||||||||||||||||| || |||||||    
T  19899023 tgaaaaatcagagatcaatcagagtcgagtgacatgtgccagtggggccttaggtcaaaaatttgggtatgaca 19898950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 10985072 - 10985132
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggg 83  Q
    ||||| |||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  10985072 aatcagagatggatcagagtcaagtgacatgtgttagtggggtcttaggtcaaaaattggg 10985132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 22631751 - 22631684
Alignment:
Q  34 gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaattggtattt 101  Q
    |||||| ||||| ||||||| ||||||| | ||||||||||||||||||| ||||||| | |||||||    
T  22631751 gatcagggtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatgacagtgggtattt 22631684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 24150082 - 24150122
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  24150082 tgtgtcagtgggaccttaggtcaaaaattggggtatgacaa 24150122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 19169145 - 19169106
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  19169145 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 19169106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 24143592 - 24143631
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  24143592 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 24143631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 615926 - 615984
Alignment:
Q  33 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||| ||||||||||| |||||||||||  ||| |||||||| ||||| |||||||    
T  615926 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 615984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 623827 - 623885
Alignment:
Q  33 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||| ||||||||||| |||||||||||  ||| |||||||| ||||| |||||||    
T  623827 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 623885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 15666268 - 15666330
Alignment:
Q  29 agatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| |||||| || ||| |||| |||| |||||| ||||||||||||||||||| |||||||    
T  15666268 agattgatcagggttaagcgacacgtgttagtgggcccttaggtcaaaaattggggtatgaca 15666330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 20058867 - 20058905
Alignment:
Q  55 gtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  20058867 gtcagtgggaccttaggtcaaaaattggggtatgacaat 20058905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 21961664 - 21961606
Alignment:
Q  34 gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||||| ||||| ||||||| || |||||  ||||||||||||||||||| ||||||||    
T  21961664 gatcagtgtcaaatgacatgcgttagtggaaccttaggtcaaaaattggggtatgacaa 21961606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 8275543 - 8275502
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||||||||||| ||||||||||||| ||||| |||||||||    
T  8275543 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaat 8275502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 20279324 - 20279398
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20279324 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 20279398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 38084460 - 38084535
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38084460 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaat 38084535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 18281 - 18354
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  18281 tgaaaaatcagagatcgatcagagtcaagtgacatgtctcagtggggccttaggtcaaaaattggggtatgaca 18354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 11873750 - 11873681
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  11873750 aatcagagatcgatcagagtcaagtgacatgtgtcagtggggtcttaggtcaaaaattggggtatgacaa 11873681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 18500299 - 18500226
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  18500299 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttagatcaaaaattggggtatgaca 18500226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 36735406 - 36735332
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36735406 tgaaaaatcagagatggatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 36735332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 5874244 - 5874319
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  5874244 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggacccttaggtcaaaaattggggtatgacaat 5874319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 5871103 - 5871176
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  5871103 tgaaaaatcagagatcgatcagagtcgagtgatatgtgtcagtgggcccttaggtcaaaaattggggtatgaca 5871176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 29586147 - 29586096
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggcctta 69  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  29586147 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggcctta 29586096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 12370462 - 12370521
Alignment:
Q  34 gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||||||||||| ||||| |||||||||||  ||| |||||||||||||| |||||||||    
T  12370462 gatcagagtcaaatgacacgtgtcagtgggatcttgggtcaaaaattggggtatgacaat 12370521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 22518960 - 22519028
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||| |||| |||||| || ||  |||| ||||||||||| ||||||||||||||||||| |||||||    
T  22518960 aatcatagattgatcagggttaaacgacacgtgtcagtgggaccttaggtcaaaaattggggtatgaca 22519028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 25036877 - 25036922
Alignment:
Q  47 tgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    ||||||||||| ||| | ||||||||||||||||||| ||||||||    
T  25036877 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatgacaa 25036922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 25040984 - 25041029
Alignment:
Q  47 tgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    ||||||||||| ||| | ||||||||||||||||||| ||||||||    
T  25040984 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatgacaa 25041029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 39649705 - 39649664
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||||||||||| ||||||||||||| ||||| |||||||||    
T  39649705 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaat 39649664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 13038973 - 13039013
Alignment:
Q  53 gtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||||| ||||| |||||||||||||||||| |||||||||    
T  13038973 gtgtcaatggggtcttaggtcaaaaattggggtatgacaat 13039013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 96855 - 96782
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  96855 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 96782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 14891854 - 14891927
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14891854 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 14891927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 22162979 - 22163053
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  22162979 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgggcccttaggtcaaaaattggggtatgacaa 22163053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 25859267 - 25859341
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  25859267 tgaaaaatcagagatcgatcagagtcgagtgacatgtgacagtggggccttaggtcaaaaattggggtatgacaa 25859341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 15061333 - 15061402
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  15061333 aatcagagatcgatcagagttaagtgacacgtgtcagtggggccttaggtcaaaaattggggtatgacaa 15061402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 20733233 - 20733160
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  20733233 tgaaaaatcagagatcgatcagagtcaagtgacacgtgtcaatggggccttaggtcaaaaattggggtatgaca 20733160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 22156970 - 22157043
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  22156970 tgaaaaatcagagatcgatcagagtcaagtgacatgtgttagtgggcccttaggtcaaaaattggggtatgaca 22157043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 32025646 - 32025720
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| |||||||||||| || |||||||||||||||||||| |||||||||||||||||| ||||||||    
T  32025646 tgaaaaatcagagatcgatcagaatcgagtgacatgtgtcagtggggtcttaggtcaaaaattggggtatgacaa 32025720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 20725271 - 20725198
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||| |||| ||| ||||||||||| ||||||| || |||||||    
T  20725271 tgaaaaatcagagatcgatcagagtcaagtgacacgtgttagtcgggccttaggtaaaaaatttgggtatgaca 20725198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 20738169 - 20738096
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||| |||| ||| ||||||||||| ||||||| || |||||||    
T  20738169 tgaaaaatcagagatcgatcagagtcaagtgacacgtgttagtcgggccttaggtaaaaaatttgggtatgaca 20738096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 32006806 - 32006734
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||||||||||||||||||| ||||| |||||||||  ||| |||||||||||||||||| |||||||    
T  32006806 tgaaaaatcacagatcgatcagagtcgagtgatatgtgtcag-cgggtcttaggtcaaaaattggggtatgaca 32006734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 25853033 - 25853095
Alignment:
Q  29 agatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||||||||||| |||||||||||||||||||||| ||||  |||||||| | |||||||    
T  25853033 agatcgatcagagtcgagtgacatgtgtcagtggggccgtaggcaaaaaattgaggtatgaca 25853095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 31999836 - 31999762
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| ||||||||||||||| ||| ||||||||||  |||  |||||||||||||||||| ||||||||    
T  31999836 tgaaaaatcagagatcgatcagagtcgagttacatgtgtcaacgggatcttaggtcaaaaattggggtatgacaa 31999762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 24487931 - 24487982
Alignment:
Q  41 gtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  24487931 gtcaaatgacatgcgtcagtgggaccttaggtcaaaaattggggtatgacaa 24487982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 6030905 - 6030856
Alignment:
Q  34 gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggg 83  Q
    |||||| ||||| ||||||| ||||||||| |||||||||||||||||||    
T  6030905 gatcagggtcaaatgacatgcgtcagtgggaccttaggtcaaaaattggg 6030856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 12307679 - 12307737
Alignment:
Q  33 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||| ||||||||||| |||||||||||  ||| |||||||| ||||| |||||||    
T  12307679 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 12307737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 45469510 - 45469472
Alignment:
Q  55 gtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  45469510 gtcagtgaggccttaggtcaaaaattggggtatgacaat 45469472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 18433069 - 18433028
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||||||||||| ||||||||||||| ||||| |||||||||    
T  18433069 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaat 18433028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 15707177 - 15707137
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||||||||||| ||||||||||||| ||||| ||||||||    
T  15707177 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaa 15707137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 23267953 - 23267993
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||||||||||| ||||||||||||| ||||| ||||||||    
T  23267953 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaa 23267993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 7e-27; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 261437 - 261364
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  261437 tgaaaaatcaaagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 261364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 13111779 - 13111852
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13111779 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 13111852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 14893138 - 14893211
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14893138 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 14893211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 16031256 - 16031325
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16031256 aatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 16031325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 21638553 - 21638626
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21638553 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 21638626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 4313598 - 4313660
Alignment:
Q  29 agatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4313598 agatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 4313660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 14888033 - 14888107
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  14888033 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggagccttaggtcaaaaattggggtatgacaa 14888107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 13105631 - 13105704
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  13105631 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattagggtatgaca 13105704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 14881307 - 14881380
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  14881307 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcggtggggccttaggtcaaaaattggggtatgaca 14881380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 23288114 - 23288187
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  23288114 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtaagtggggccttaggtcaaaaattggggtatgaca 23288187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 30102449 - 30102517
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  30102449 aatcagagatcgatcagagtcaagtgacatgtatcagtggggccttaagtcaaaaattgggatatgaca 30102517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 68218 - 68145
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||    
T  68218 tgaataatcaaagatcgatcagagtcaagtgacatgtgccagtggggcgttaggtcaaaaattggggtatgaca 68145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 74311 - 74238
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||    
T  74311 tgaataatcaaagatcgatcagagtcaagtgacatgtgccagtggggcgttaggtcaaaaattggggtatgaca 74238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 11180833 - 11180760
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||    
T  11180833 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggttaaaaattggggtatgaca 11180760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 48060734 - 48060795
Alignment:
Q  30 gatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  48060734 gatcgatcagagtcaagtgacatgtgtcagtgaggccttaggtcaaaaattggggtatgaca 48060795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 12550484 - 12550412
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgac 90  Q
    |||| ||||| ||||||||| ||||| |||||||||||||| |||||||||||||||||||||||| ||||||    
T  12550484 tgaaaaatcagagatcgatcggagtcgagtgacatgtgtcactggggccttaggtcaaaaattggggtatgac 12550412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 3404825 - 3404752
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| |||||||| |||||| | |||||||||||||||||||||||||| |||||||||| |||||||    
T  3404825 tgaaaaatcagagatcgattagagtcgaatgacatgtgtcagtggggccttaggtaaaaaattggggtatgaca 3404752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 8612695 - 8612622
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||| |||||||||| ||||||||  |||||||||||||||||| |||||||    
T  8612695 tgaaaaatcagagatcgatcagagtcgagtgacatgtctcagtgggctcttaggtcaaaaattggggtatgaca 8612622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 8606235 - 8606160
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| |||||||| |||||| |||||||||| ||||||||  |||||||||||||||||| |||||||||    
T  8606235 tgaaaaatcagagatcgattagagtcgagtgacatgtttcagtgggctcttaggtcaaaaattggggtatgacaat 8606160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 49967413 - 49967354
Alignment:
Q  32 tcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||| || |||||||    
T  49967413 tcgatcagggtcaagtgacacgtgtcagtggggccttaggtcaaaaattagggtatgaca 49967354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 37470197 - 37470141
Alignment:
Q  33 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatga 89  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||||||||| |||||    
T  37470197 cgatcagggtcaagtgacacgtgttagtggggccttaggtcaaaaattggggtatga 37470141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 13086611 - 13086554
Alignment:
Q  34 gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||| ||||| |||||||||| |||||| ||||||||||||||||||| |||||||    
T  13086611 gatcagggtcaaatgacatgtgttagtgggaccttaggtcaaaaattggggtatgaca 13086554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 30068675 - 30068743
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||| ||||||||||||||||||||||  |  |||||||| ||||||||||||| || || |||||||    
T  30068675 aatcaaagatcgatcagagtcaagtgacgcgcatcagtgggaccttaggtcaaaatttagggtatgaca 30068743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 91
Target Start/End: Complemental strand, 18706310 - 18706267
Alignment:
Q  48 gacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||    
T  18706310 gacacgtgtcagtgggaccttaggtcaaaaattggggtatgaca 18706267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 13509417 - 13509479
Alignment:
Q  29 agatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||||||||||||| ||||  | ||||||||| ||||||||||||| || || |||||||    
T  13509417 agatcgatcagagtcaaatgacgcgcgtcagtgggaccttaggtcaaaatttagggtatgaca 13509479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 20603997 - 20604055
Alignment:
Q  33 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||| ||||||||||| |||||||||||  ||| |||||||| ||||| |||||||    
T  20603997 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 20604055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 94
Target Start/End: Complemental strand, 21607491 - 21607449
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaatt 94  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||    
T  21607491 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaatt 21607449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 37256102 - 37256160
Alignment:
Q  33 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||| ||||||||||| |||||||||||  ||| |||||||| ||||| |||||||    
T  37256102 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 37256160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 37265938 - 37265996
Alignment:
Q  33 cgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||| ||||||||||| |||||||||||  ||| |||||||| ||||| |||||||    
T  37265938 cgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatgaca 37265996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 15537758 - 15537799
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||||||||||| ||||||||||||| ||||| |||||||||    
T  15537758 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaat 15537799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 11630009 - 11630049
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||||||||||| ||||||||||||| ||||| ||||||||    
T  11630009 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaa 11630049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 15610518 - 15610554
Alignment:
Q  55 gtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  15610518 gtcagtgggaccttaggtcaaaaattggggtatgaca 15610554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 33814598 - 33814634
Alignment:
Q  56 tcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  33814598 tcagtgggaccttaggtcaaaaattggggtatgacaa 33814634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 46371211 - 46371171
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||||||||||| ||||||||||||| ||||| ||||||||    
T  46371211 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaa 46371171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 7e-27; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 19367548 - 19367475
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19367548 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 19367475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 35070108 - 35070035
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35070108 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 35070035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 20429426 - 20429351
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||    
T  20429426 tgaataatcagagatcgatcagagtcaagtgacaagtgtcagtgggaccttaggtcaaaaattggggtatgacaat 20429351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 44832548 - 44832623
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| |||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  44832548 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgaagccttaggttaaaaattgggatatgacaat 44832623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 1961711 - 1961638
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||    
T  1961711 tgaaaaatcagagatcgatcagagtcaagtgttatgtgtcagtggggccttaggtcaaaaattggggtatgaca 1961638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 18098448 - 18098375
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  18098448 tgaaaaatcagagatcgatcagagtcaagtgacatgtgttagtggggccttaggttaaaaattggggtatgaca 18098375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 22116343 - 22116416
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  22116343 tgaaaaatcagagatcgatcagagttgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 22116416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 47108446 - 47108372
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| |||||||||||||||||||||||||||| |||||| |||||||| ||||||| |||||||||||    
T  47108446 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtaagtgggaccttaggttaaaaattaggatatgacaa 47108372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 1955891 - 1955829
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 80  Q
    |||| ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  1955891 tgaaaaatcagagatcgatcagagtcaagtgatacgtgtcagtggggccttaggtcaaaaatt 1955829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 2336072 - 2336122
Alignment:
Q  41 gtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2336072 gtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 2336122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 16884561 - 16884516
Alignment:
Q  48 gacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||    
T  16884561 gacacgtgtcagtggggccttaggtcaaaaattggggtatgacaat 16884516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 39454438 - 39454379
Alignment:
Q  34 gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||||| ||||| ||||||| ||||||| | ||||||||||||||||||| |||||||||    
T  39454438 gatcagggtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatgacaat 39454379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 22840176 - 22840215
Alignment:
Q  53 gtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  22840176 gtgtcagtgggaccttaggtcaaaaattggggtatgacaa 22840215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 20979997 - 20980038
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||||||||||| ||||||||||||| ||||| |||||||||    
T  20979997 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaat 20980038  T

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Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 13450103 - 13450035
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||| ||||||||| ||||||| ||||  | ||||||||| ||||||||||||| || || |||||||    
T  13450103 aatcagagatcgatccgagtcaaatgacgcgcgtcagtgggaccttaggtcaaaatttagggtatgaca 13450035  T

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Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 20518331 - 20518279
Alignment:
Q  41 gtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    ||||| ||||||| || ||||||  |||||||||||||||||| |||||||||    
T  20518331 gtcaaatgacatgcgttagtgggatcttaggtcaaaaattggggtatgacaat 20518279  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 25926805 - 25926845
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||||||||||| ||||||||||||| ||||| ||||||||    
T  25926805 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaa 25926845  T

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Target: scaffold1922 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold1922
Description:

Target: scaffold1922; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 208 - 282
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  208 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggcattaggtcaaaaattggggtatgacaa 282  T

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Target: scaffold0150 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 38591 - 38665
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38591 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacaa 38665  T

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Target: scaffold0085 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 7791 - 7865
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  7791 tgaaaaatcagagatcgatcagagtcaagtgacatgtgttagtggggccttaggtcaaaaattggggtatgacaa 7865  T

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Target: scaffold0473 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 9155 - 9228
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  9155 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgaggccttaggtcaaaaattggggtatgaca 9228  T

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Target: scaffold0320 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 6313 - 6386
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  6313 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggacaaaaattggggtatgaca 6386  T

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Target: scaffold0050 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 27708 - 27781
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  27708 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca 27781  T

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Target: scaffold0028 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 65911 - 65838
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  65911 tgaaaaatcagagatcgatcagagtcaagtgacatgtgtgagtggggccttaggtcaaaaattggggtatgaca 65838  T

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Target: scaffold0351 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 7633 - 7708
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||    
T  7633 tgaaaaatcagagatcgatcagagtcaagtgacaagtgtcagtggggccttaggtcaaaaattagggtatgacaat 7708  T

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Target: scaffold0306 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 15717 - 15644
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  15717 tgaaaaatcatagatcgatcagagtcaagtgacatgtgtcagtggggccttagaacaaaaattggggtatgaca 15644  T

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Target: scaffold0253 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 10412 - 10339
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  10412 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagcggggccttaggtcaaaaattggggtatgaca 10339  T

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Target: scaffold0253; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 19837 - 19764
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  19837 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagcggggccttaggtcaaaaattggggtatgaca 19764  T

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Target: scaffold0046 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 86694 - 86763
Alignment:
Q  23 aatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||    
T  86694 aatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattagggtatgacaa 86763  T

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Target: scaffold0630 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 1370 - 1434
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgg 82  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1370 tgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaattgg 1434  T

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Target: scaffold0039 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 89866 - 89937
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatga 89  Q
    |||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  89866 tgaaaaatcagagatcgataagagtcaagtgacatatgtcagtggggccttaggtcaaaaattggggtatga 89937  T

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Target: scaffold0328 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 169 - 243
Alignment:
Q  18 tgaagaatcacagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||| ||||| ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  169 tgaaaaatcagagatcgatcagagtcgagtgacaagtgtcagtgaggccttaggtcaaaaattggggtatgacaa 243  T

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Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 38088 - 38138
Alignment:
Q  41 gtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  38088 gtcaagtgacacgtgtcagtggggccttaggtcaaaaattggggtatgaca 38138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 20251 - 20210
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||||||||||| ||||||||||||| ||||| |||||||||    
T  20251 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaat 20210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 2528 - 2469
Alignment:
Q  34 gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||||| ||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||    
T  2528 gatcagggtcaaatgacatgcgtcagtgggaccttaggtcaaaaattggggtatgacaat 2469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 11527 - 11470
Alignment:
Q  34 gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||| ||||| |||||||||| |||||| ||||||||||||||||||| |||||||    
T  11527 gatcagggtcaaatgacatgtgttagtgggtccttaggtcaaaaattggggtatgaca 11470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 9280 - 9339
Alignment:
Q  34 gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||||| ||||| ||||||| ||||||| | ||||||||||||||||||| |||||||||    
T  9280 gatcagggtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatgacaat 9339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1888 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1888
Description:

Target: scaffold1888; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 1058 - 1117
Alignment:
Q  34 gatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacaat 93  Q
    |||||| ||||||||||| ||||| |||||  ||| |||||||||||||| |||||||||    
T  1058 gatcagggtcaagtgacacgtgtcggtgggatcttgggtcaaaaattggggtatgacaat 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0755 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0755
Description:

Target: scaffold0755; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 1002 - 963
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  1002 tgtgtcagtggggccttaggtcaaaatttggggtatgaca 963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 92
Target Start/End: Complemental strand, 3374 - 3335
Alignment:
Q  53 gtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  3374 gtgtcagtgggaccttaggtcaaaaattggggtatgacaa 3335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 92
Target Start/End: Complemental strand, 15854 - 15815
Alignment:
Q  53 gtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  15854 gtgtcagtgggaccttaggtcaaaaattggggtatgacaa 15815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 808 - 770
Alignment:
Q  53 gtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  808 gtgtcagtgggaccttaggtcaaaaattggggtatgaca 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 16565 - 16604
Alignment:
Q  53 gtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  16565 gtgtcagtgggaccttaggtcaaaaattggggtatgacaa 16604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 30722 - 30765
Alignment:
Q  48 gacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||    
T  30722 gacacgtgtcagtgggaccttaggtcaaaaattggggtatgaca 30765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 17799 - 17838
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  17799 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 17838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 25718 - 25757
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  25718 tgtgtcagtgggaccttaggtcaaaaattggggtatgaca 25757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 150634 - 150689
Alignment:
Q  36 tcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||| || |||||||||||||||  | |||||||||||||||||| |||||||    
T  150634 tcagagttaaatgacatgtgtcagtgttgtcttaggtcaaaaattggggtatgaca 150689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 391 - 435
Alignment:
Q  47 tgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||| |||||||||  | ||||||||||||||||||||||||||    
T  391 tgacacgtgtcagtgctgtcttaggtcaaaaattgggatatgaca 435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 8394 - 8438
Alignment:
Q  47 tgacatgtgtcagtggggccttaggtcaaaaattgggatatgaca 91  Q
    ||||||||||| ||| | ||||||||||||||||||| |||||||    
T  8394 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatgaca 8438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 2800 - 2840
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||||||||||| ||||||||||||| ||||| ||||||||    
T  2800 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaa 2840  T

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Target: scaffold0182 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 1754 - 1714
Alignment:
Q  52 tgtgtcagtggggccttaggtcaaaaattgggatatgacaa 92  Q
    |||||||||||| ||||||||||||| ||||| ||||||||    
T  1754 tgtgtcagtgggaccttaggtcaaaatttggggtatgacaa 1714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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