View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8180A_low_233 (Length: 244)

Name: NF8180A_low_233
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8180A_low_233
NF8180A_low_233
[»] chr1 (35 HSPs)
chr1 (16-234)||(19676598-19676823)
chr1 (16-231)||(21045992-21046214)
chr1 (16-234)||(20633571-20633799)
chr1 (16-201)||(16058287-16058478)
chr1 (16-174)||(42912936-42913101)
chr1 (123-234)||(28476674-28476785)
chr1 (123-234)||(12710868-12710979)
chr1 (144-234)||(41225394-41225484)
chr1 (144-234)||(41226647-41226737)
chr1 (144-232)||(20588660-20588748)
chr1 (144-232)||(20593198-20593286)
chr1 (20-174)||(21168825-21168985)
chr1 (57-174)||(24723351-24723475)
chr1 (123-174)||(7051922-7051973)
chr1 (126-213)||(8306610-8306697)
chr1 (123-174)||(51336480-51336531)
chr1 (21-174)||(51324396-51324556)
chr1 (123-174)||(12327743-12327794)
chr1 (123-174)||(13302903-13302954)
chr1 (123-174)||(21239049-21239100)
chr1 (71-170)||(45499342-45499439)
chr1 (123-174)||(4595853-4595904)
chr1 (123-174)||(29763632-29763683)
chr1 (123-174)||(46197745-46197796)
chr1 (124-174)||(42697786-42697836)
chr1 (141-231)||(22350735-22350820)
chr1 (123-174)||(50001477-50001528)
chr1 (123-213)||(17901754-17901845)
chr1 (123-174)||(22145666-22145717)
chr1 (57-108)||(44822094-44822145)
chr1 (123-213)||(6834177-6834268)
chr1 (126-174)||(635004-635052)
chr1 (138-174)||(24727383-24727419)
chr1 (123-179)||(38056667-38056723)
chr1 (144-213)||(45499564-45499634)
[»] chr7 (67 HSPs)
chr7 (16-234)||(12465200-12465425)
chr7 (16-234)||(12372161-12372386)
chr7 (16-234)||(8851099-8851324)
chr7 (16-234)||(32433529-32433754)
chr7 (16-234)||(12322870-12323095)
chr7 (16-234)||(16999320-16999548)
chr7 (16-228)||(13147418-13147637)
chr7 (16-234)||(11067355-11067580)
chr7 (16-213)||(12127124-12127328)
chr7 (16-228)||(46386038-46386253)
chr7 (16-174)||(20620173-20620338)
chr7 (16-174)||(14180398-14180563)
chr7 (16-179)||(20214034-20214204)
chr7 (16-170)||(10277215-10277375)
chr7 (16-174)||(20586239-20586404)
chr7 (16-174)||(24269947-24270112)
chr7 (123-233)||(43276685-43276795)
chr7 (123-233)||(19283057-19283167)
chr7 (21-174)||(33002053-33002205)
chr7 (112-213)||(44374833-44374934)
chr7 (112-213)||(44383698-44383799)
chr7 (144-234)||(58353-58443)
chr7 (123-234)||(19195612-19195725)
chr7 (128-233)||(18074588-18074693)
chr7 (123-234)||(12754553-12754663)
chr7 (123-234)||(47974760-47974871)
chr7 (144-234)||(14160796-14160886)
chr7 (123-234)||(32160140-32160251)
chr7 (123-187)||(4690650-4690714)
chr7 (126-234)||(8488034-8488142)
chr7 (126-234)||(8513693-8513801)
chr7 (52-170)||(25943041-25943166)
chr7 (123-174)||(48807325-48807376)
chr7 (104-170)||(13744662-13744728)
chr7 (123-213)||(38299749-38299841)
chr7 (123-175)||(16078331-16078383)
chr7 (123-174)||(14218895-14218946)
chr7 (123-174)||(35771441-35771492)
chr7 (159-229)||(16214511-16214581)
chr7 (144-233)||(15119248-15119337)
chr7 (102-174)||(10658851-10658923)
chr7 (144-213)||(13744469-13744540)
chr7 (123-174)||(4071821-4071872)
chr7 (123-174)||(29052182-29052233)
chr7 (156-213)||(14156353-14156410)
chr7 (144-185)||(25943289-25943330)
chr7 (103-179)||(36704566-36704642)
chr7 (59-174)||(8135238-8135359)
chr7 (123-187)||(43745657-43745721)
chr7 (123-174)||(15289106-15289157)
chr7 (123-174)||(16250222-16250273)
chr7 (123-174)||(16550005-16550056)
chr7 (123-174)||(16615606-16615657)
chr7 (123-174)||(18955331-18955382)
chr7 (16-59)||(25942358-25942401)
chr7 (59-174)||(15095637-15095759)
chr7 (144-213)||(37539470-37539541)
chr7 (123-174)||(3287745-3287796)
chr7 (123-174)||(13698638-13698689)
chr7 (60-107)||(15623950-15623997)
chr7 (123-174)||(18990848-18990899)
chr7 (123-174)||(20252182-20252233)
chr7 (123-173)||(14928290-14928340)
chr7 (123-173)||(15351756-15351806)
chr7 (144-185)||(8930754-8930795)
chr7 (123-213)||(13315041-13315133)
chr7 (59-108)||(15140143-15140192)
[»] chr6 (38 HSPs)
chr6 (16-234)||(7827859-7828084)
chr6 (16-234)||(19655171-19655396)
chr6 (16-234)||(23150227-23150452)
chr6 (16-234)||(18703451-18703680)
chr6 (16-234)||(18709386-18709615)
chr6 (16-233)||(27125419-27125642)
chr6 (16-174)||(15890712-15890877)
chr6 (31-174)||(27329981-27330131)
chr6 (31-174)||(27390721-27390871)
chr6 (20-174)||(30673402-30673556)
chr6 (123-234)||(20410452-20410563)
chr6 (156-234)||(17318106-17318184)
chr6 (20-174)||(19167853-19167998)
chr6 (20-174)||(19235015-19235175)
chr6 (102-173)||(24267829-24267900)
chr6 (144-234)||(31734729-31734819)
chr6 (123-174)||(15998890-15998941)
chr6 (123-178)||(18585806-18585861)
chr6 (21-174)||(28948466-28948627)
chr6 (123-213)||(19825447-19825537)
chr6 (108-174)||(27572122-27572188)
chr6 (123-174)||(12041620-12041671)
chr6 (123-174)||(18928682-18928733)
chr6 (154-213)||(25922033-25922092)
chr6 (144-201)||(23431420-23431477)
chr6 (123-174)||(31731904-31731955)
chr6 (144-213)||(10446239-10446310)
chr6 (102-174)||(24550168-24550240)
chr6 (130-170)||(29625191-29625231)
chr6 (123-174)||(15173453-15173504)
chr6 (123-213)||(13285749-13285841)
chr6 (63-174)||(19401028-19401146)
chr6 (127-187)||(21683062-21683122)
chr6 (123-179)||(23658090-23658146)
chr6 (123-174)||(15900654-15900705)
chr6 (26-87)||(18259266-18259328)
chr6 (156-213)||(34140415-34140474)
chr6 (156-213)||(34153031-34153090)
[»] chr4 (44 HSPs)
chr4 (16-234)||(25091540-25091765)
chr4 (16-234)||(53630414-53630639)
chr4 (16-234)||(10356376-10356601)
chr4 (16-234)||(19610211-19610436)
chr4 (16-234)||(42875684-42875909)
chr4 (16-234)||(16998412-16998637)
chr4 (11-196)||(11425825-11426017)
chr4 (16-174)||(15115109-15115274)
chr4 (20-174)||(37019561-37019722)
chr4 (16-170)||(6633541-6633701)
chr4 (16-170)||(46001535-46001695)
chr4 (123-234)||(9639011-9639122)
chr4 (123-234)||(12424230-12424341)
chr4 (123-234)||(25513852-25513963)
chr4 (123-234)||(10694185-10694296)
chr4 (123-234)||(10907951-10908062)
chr4 (144-234)||(19022366-19022456)
chr4 (144-234)||(40230328-40230418)
chr4 (28-94)||(26921708-26921774)
chr4 (144-234)||(44023547-44023633)
chr4 (123-187)||(2424374-2424438)
chr4 (102-174)||(15613070-15613142)
chr4 (123-174)||(19434559-19434610)
chr4 (123-213)||(33186904-33186994)
chr4 (102-174)||(51993541-51993613)
chr4 (123-174)||(9924155-9924206)
chr4 (123-174)||(35811376-35811427)
chr4 (123-174)||(9870444-9870495)
chr4 (123-174)||(11478653-11478704)
chr4 (123-174)||(14549761-14549812)
chr4 (123-174)||(15008964-15009015)
chr4 (102-174)||(21175-21248)
chr4 (137-174)||(21062656-21062693)
chr4 (144-201)||(33243267-33243324)
chr4 (144-213)||(10273405-10273476)
chr4 (118-174)||(14186955-14187010)
chr4 (123-174)||(16296939-16296990)
chr4 (123-174)||(40620533-40620584)
chr4 (144-213)||(55583218-55583289)
chr4 (154-189)||(26014316-26014351)
chr4 (124-174)||(32466194-32466244)
chr4 (137-174)||(14186067-14186104)
chr4 (144-213)||(13165154-13165225)
chr4 (123-187)||(26446208-26446272)
[»] chr2 (44 HSPs)
chr2 (16-231)||(24780783-24781005)
chr2 (16-234)||(24436535-24436760)
chr2 (13-231)||(5031072-5031297)
chr2 (16-234)||(9975816-9976041)
chr2 (29-234)||(22251388-22251600)
chr2 (16-213)||(17307373-17307577)
chr2 (16-234)||(2523687-2523912)
chr2 (16-174)||(24516073-24516238)
chr2 (16-174)||(40912207-40912372)
chr2 (16-187)||(19201187-19201365)
chr2 (16-170)||(37270587-37270747)
chr2 (16-137)||(27484514-27484642)
chr2 (123-234)||(27852669-27852776)
chr2 (123-234)||(21369294-21369405)
chr2 (144-233)||(14179669-14179758)
chr2 (16-108)||(36841151-36841243)
chr2 (162-234)||(36841267-36841339)
chr2 (124-201)||(22501973-22502050)
chr2 (124-201)||(22509907-22509984)
chr2 (150-234)||(31521197-31521281)
chr2 (59-174)||(25142133-25142256)
chr2 (126-201)||(149474-149549)
chr2 (141-234)||(20916326-20916419)
chr2 (123-174)||(357882-357933)
chr2 (144-226)||(14183414-14183496)
chr2 (144-230)||(24718041-24718127)
chr2 (59-174)||(3539766-3539889)
chr2 (57-172)||(1383545-1383667)
chr2 (124-174)||(25046120-25046170)
chr2 (123-174)||(5986178-5986229)
chr2 (123-174)||(21080969-21081020)
chr2 (123-201)||(12626399-12626477)
chr2 (123-174)||(25184190-25184241)
chr2 (58-108)||(24884399-24884449)
chr2 (144-185)||(23801518-23801559)
chr2 (123-166)||(18357975-18358018)
chr2 (123-174)||(21315476-21315527)
chr2 (123-174)||(21335266-21335317)
chr2 (123-170)||(21915625-21915672)
chr2 (137-179)||(14694341-14694383)
chr2 (57-94)||(357809-357846)
chr2 (137-174)||(44072572-44072609)
chr2 (123-159)||(18390229-18390265)
chr2 (123-183)||(23610627-23610687)
[»] scaffold0737 (1 HSPs)
scaffold0737 (16-234)||(4654-4879)
[»] scaffold0064 (1 HSPs)
scaffold0064 (16-234)||(58633-58858)
[»] chr3 (61 HSPs)
chr3 (16-234)||(17044853-17045078)
chr3 (16-234)||(17047013-17047238)
chr3 (28-234)||(22306523-22306736)
chr3 (16-233)||(17538993-17539217)
chr3 (16-228)||(11259318-11259537)
chr3 (7-210)||(49900608-49900818)
chr3 (16-234)||(17693954-17694179)
chr3 (16-234)||(35354489-35354714)
chr3 (18-234)||(41172311-41172534)
chr3 (16-234)||(15931448-15931672)
chr3 (16-201)||(17518846-17519038)
chr3 (16-201)||(17533708-17533900)
chr3 (16-234)||(40812720-40812941)
chr3 (16-174)||(40807883-40808048)
chr3 (32-234)||(14508749-14508959)
chr3 (16-174)||(44274305-44274470)
chr3 (16-170)||(10311415-10311575)
chr3 (111-234)||(17541423-17541546)
chr3 (16-159)||(50348041-50348191)
chr3 (16-174)||(10563596-10563760)
chr3 (123-201)||(15566745-15566823)
chr3 (16-80)||(35064681-35064745)
chr3 (123-234)||(14152339-14152450)
chr3 (167-234)||(17325561-17325628)
chr3 (144-231)||(50350759-50350846)
chr3 (16-74)||(5200277-5200335)
chr3 (21-174)||(9510916-9511076)
chr3 (21-174)||(9518891-9519051)
chr3 (123-189)||(11563726-11563792)
chr3 (77-174)||(16050875-16050979)
chr3 (21-174)||(19568208-19568368)
chr3 (137-234)||(45530544-45530639)
chr3 (126-213)||(14641509-14641596)
chr3 (123-174)||(15446868-15446919)
chr3 (64-149)||(35064566-35064658)
chr3 (153-213)||(50347596-50347656)
chr3 (123-174)||(24177736-24177787)
chr3 (123-174)||(33565088-33565139)
chr3 (144-202)||(6159427-6159485)
chr3 (133-174)||(5200243-5200284)
chr3 (144-201)||(53646032-53646089)
chr3 (123-171)||(11885560-11885608)
chr3 (102-174)||(12509350-12509422)
chr3 (106-174)||(36528851-36528919)
chr3 (123-174)||(35960928-35960979)
chr3 (144-213)||(12917265-12917336)
chr3 (126-174)||(13185899-13185947)
chr3 (144-212)||(3527117-3527187)
chr3 (123-174)||(16979913-16979964)
chr3 (123-174)||(17208525-17208576)
chr3 (123-174)||(22652774-22652825)
chr3 (123-174)||(42323971-42324022)
chr3 (123-185)||(29907640-29907702)
chr3 (123-185)||(29948806-29948868)
chr3 (123-185)||(29997960-29998022)
chr3 (59-174)||(49968859-49968981)
chr3 (51-174)||(3263963-3264083)
chr3 (123-178)||(5215648-5215703)
chr3 (26-91)||(34851388-34851454)
chr3 (123-213)||(22841239-22841330)
chr3 (103-171)||(14250085-14250153)
[»] scaffold0001 (3 HSPs)
scaffold0001 (16-234)||(77574-77799)
scaffold0001 (16-234)||(31881-32106)
scaffold0001 (16-234)||(37188-37413)
[»] scaffold1283 (1 HSPs)
scaffold1283 (16-234)||(408-633)
[»] chr8 (55 HSPs)
chr8 (16-232)||(42817849-42818072)
chr8 (23-228)||(19140659-19140870)
chr8 (16-234)||(39935947-39936175)
chr8 (7-174)||(20083638-20083812)
chr8 (16-187)||(5761421-5761598)
chr8 (16-164)||(5082222-5082377)
chr8 (16-170)||(6573060-6573221)
chr8 (16-170)||(37292593-37292753)
chr8 (16-170)||(6202664-6202824)
chr8 (16-174)||(6101753-6101918)
chr8 (27-174)||(20397510-20397656)
chr8 (123-233)||(18761449-18761559)
chr8 (7-108)||(20178602-20178704)
chr8 (144-234)||(36306019-36306109)
chr8 (134-234)||(23943766-23943866)
chr8 (144-234)||(21579146-21579236)
chr8 (127-231)||(22258249-22258353)
chr8 (144-233)||(18834444-18834533)
chr8 (59-189)||(20022025-20022155)
chr8 (123-187)||(4380604-4380668)
chr8 (123-213)||(22208270-22208360)
chr8 (144-234)||(29762808-29762898)
chr8 (154-213)||(12037125-12037184)
chr8 (123-174)||(17906849-17906900)
chr8 (123-174)||(22532132-22532183)
chr8 (123-174)||(22536817-22536868)
chr8 (123-174)||(36727038-36727089)
chr8 (123-174)||(45469219-45469270)
chr8 (124-174)||(23419443-23419493)
chr8 (126-174)||(19700165-19700213)
chr8 (144-213)||(22345186-22345257)
chr8 (144-213)||(22356846-22356917)
chr8 (123-174)||(22254767-22254818)
chr8 (107-174)||(22583660-22583727)
chr8 (107-174)||(23889784-23889851)
chr8 (123-174)||(26454709-26454760)
chr8 (13-174)||(31722493-31722661)
chr8 (104-170)||(36305837-36305903)
chr8 (137-174)||(17158963-17159000)
chr8 (137-174)||(23479097-23479134)
chr8 (138-174)||(19880838-19880874)
chr8 (130-170)||(34758875-34758915)
chr8 (123-174)||(17218703-17218754)
chr8 (145-213)||(23884192-23884262)
chr8 (123-174)||(23948264-23948315)
chr8 (126-213)||(22610226-22610315)
chr8 (124-174)||(23899987-23900037)
chr8 (126-187)||(21514695-21514756)
chr8 (144-213)||(20879494-20879565)
chr8 (123-187)||(36732399-36732463)
chr8 (127-174)||(12577885-12577931)
chr8 (123-178)||(18816291-18816346)
chr8 (123-174)||(22317911-22317961)
chr8 (123-170)||(25657518-25657565)
chr8 (137-174)||(16198851-16198888)
[»] scaffold0407 (1 HSPs)
scaffold0407 (16-234)||(11215-11439)
[»] scaffold1633 (1 HSPs)
scaffold1633 (16-233)||(1092-1316)
[»] scaffold0077 (2 HSPs)
scaffold0077 (16-233)||(34226-34450)
scaffold0077 (102-174)||(5930-6002)
[»] scaffold0080 (2 HSPs)
scaffold0080 (16-229)||(21738-21958)
scaffold0080 (181-234)||(58827-58880)
[»] scaffold0047 (1 HSPs)
scaffold0047 (20-234)||(78955-79161)
[»] chr5 (30 HSPs)
chr5 (16-201)||(21300017-21300209)
chr5 (30-170)||(7484903-7485050)
chr5 (16-210)||(19921525-19921732)
chr5 (32-183)||(31622028-31622178)
chr5 (20-174)||(20566445-20566598)
chr5 (123-233)||(23199148-23199258)
chr5 (144-234)||(21398584-21398674)
chr5 (123-174)||(6551290-6551341)
chr5 (144-234)||(26762424-26762514)
chr5 (63-170)||(22111762-22111876)
chr5 (123-179)||(36508628-36508684)
chr5 (144-210)||(32607280-32607346)
chr5 (149-213)||(8503849-8503913)
chr5 (123-171)||(30616615-30616663)
chr5 (123-174)||(266039-266090)
chr5 (123-174)||(17011729-17011780)
chr5 (123-174)||(20469176-20469227)
chr5 (137-174)||(21617928-21617965)
chr5 (102-174)||(10954069-10954141)
chr5 (123-174)||(18744875-18744926)
chr5 (123-174)||(31456961-31457012)
chr5 (58-108)||(17876132-17876182)
chr5 (28-77)||(22111715-22111764)
chr5 (123-174)||(10774664-10774714)
chr5 (144-187)||(14025794-14025837)
chr5 (123-174)||(25249828-25249879)
chr5 (123-174)||(25313612-25313663)
chr5 (126-213)||(16063755-16063844)
chr5 (126-170)||(1627071-1627115)
chr5 (144-213)||(21504161-21504232)
[»] scaffold0111 (2 HSPs)
scaffold0111 (21-201)||(12506-12693)
scaffold0111 (16-171)||(5270-5432)
[»] scaffold1941 (1 HSPs)
scaffold1941 (16-174)||(25-190)
[»] scaffold0019 (1 HSPs)
scaffold0019 (102-234)||(24071-24203)
[»] scaffold0334 (1 HSPs)
scaffold0334 (16-174)||(405-570)
[»] scaffold1766 (1 HSPs)
scaffold1766 (16-174)||(696-861)
[»] scaffold0241 (2 HSPs)
scaffold0241 (16-174)||(3069-3234)
scaffold0241 (16-108)||(2451-2543)
[»] scaffold0207 (1 HSPs)
scaffold0207 (16-174)||(13392-13557)
[»] scaffold0020 (3 HSPs)
scaffold0020 (16-174)||(168999-169164)
scaffold0020 (16-174)||(143498-143663)
scaffold0020 (144-234)||(174243-174333)
[»] scaffold0036 (1 HSPs)
scaffold0036 (68-234)||(78125-78298)
[»] scaffold0026 (1 HSPs)
scaffold0026 (16-174)||(146610-146775)
[»] scaffold0004 (6 HSPs)
scaffold0004 (16-187)||(328275-328455)
scaffold0004 (26-166)||(72841-72980)
scaffold0004 (28-170)||(75691-75834)
scaffold0004 (126-213)||(73091-73180)
scaffold0004 (123-170)||(110175-110222)
scaffold0004 (148-213)||(75963-76030)
[»] scaffold0956 (1 HSPs)
scaffold0956 (102-233)||(2535-2666)
[»] scaffold0632 (1 HSPs)
scaffold0632 (16-174)||(1052-1217)
[»] scaffold0285 (1 HSPs)
scaffold0285 (20-174)||(19652-19805)
[»] scaffold0213 (1 HSPs)
scaffold0213 (123-231)||(19208-19316)
[»] scaffold0112 (1 HSPs)
scaffold0112 (20-174)||(2787-2941)
[»] scaffold0149 (2 HSPs)
scaffold0149 (42-174)||(29573-29711)
scaffold0149 (127-174)||(21616-21663)
[»] scaffold0174 (6 HSPs)
scaffold0174 (26-170)||(5167-5310)
scaffold0174 (26-170)||(11287-11430)
scaffold0174 (27-170)||(19605-19754)
scaffold0174 (123-213)||(5455-5545)
scaffold0174 (123-213)||(11617-11707)
scaffold0174 (144-213)||(19878-19947)
[»] scaffold0113 (1 HSPs)
scaffold0113 (55-174)||(35418-35542)
[»] scaffold0431 (1 HSPs)
scaffold0431 (123-234)||(5634-5745)
[»] scaffold0100 (1 HSPs)
scaffold0100 (30-170)||(26638-26779)
[»] scaffold0107 (1 HSPs)
scaffold0107 (154-233)||(13493-13572)
[»] scaffold0379 (2 HSPs)
scaffold0379 (64-170)||(10741-10846)
scaffold0379 (144-234)||(10969-11059)
[»] scaffold0203 (1 HSPs)
scaffold0203 (123-201)||(17913-17991)
[»] scaffold0162 (1 HSPs)
scaffold0162 (144-234)||(23832-23922)
[»] scaffold0032 (1 HSPs)
scaffold0032 (123-201)||(61821-61899)
[»] scaffold0853 (1 HSPs)
scaffold0853 (123-233)||(2396-2505)
[»] scaffold0125 (1 HSPs)
scaffold0125 (154-233)||(28583-28662)
[»] scaffold0414 (1 HSPs)
scaffold0414 (144-234)||(11100-11190)
[»] scaffold0083 (3 HSPs)
scaffold0083 (21-174)||(10755-10913)
scaffold0083 (60-174)||(5045-5156)
scaffold0083 (123-174)||(1938-1989)
[»] scaffold1256 (2 HSPs)
scaffold1256 (123-187)||(2187-2251)
scaffold1256 (206-234)||(2141-2169)
[»] scaffold0628 (1 HSPs)
scaffold0628 (123-189)||(1043-1109)
[»] scaffold0371 (2 HSPs)
scaffold0371 (144-234)||(10386-10476)
scaffold0371 (149-234)||(3901-3986)
[»] scaffold0516 (3 HSPs)
scaffold0516 (126-187)||(5292-5353)
scaffold0516 (206-234)||(5149-5177)
scaffold0516 (206-234)||(5246-5274)
[»] scaffold0328 (1 HSPs)
scaffold0328 (144-201)||(18613-18670)
[»] scaffold0074 (1 HSPs)
scaffold0074 (141-234)||(1957-2050)
[»] scaffold0037 (3 HSPs)
scaffold0037 (21-174)||(112966-113127)
scaffold0037 (21-174)||(117807-117960)
scaffold0037 (63-108)||(81501-81546)
[»] scaffold0802 (1 HSPs)
scaffold0802 (123-174)||(4709-4760)
[»] scaffold0230 (1 HSPs)
scaffold0230 (123-178)||(6681-6736)
[»] scaffold0071 (1 HSPs)
scaffold0071 (123-174)||(15273-15324)
[»] scaffold0676 (1 HSPs)
scaffold0676 (123-201)||(2882-2960)
[»] scaffold0256 (1 HSPs)
scaffold0256 (104-166)||(1855-1917)
[»] scaffold0041 (1 HSPs)
scaffold0041 (123-169)||(5712-5758)
[»] scaffold0395 (1 HSPs)
scaffold0395 (154-234)||(11921-12001)
[»] scaffold0220 (2 HSPs)
scaffold0220 (123-174)||(19955-20006)
scaffold0220 (123-179)||(13950-14006)
[»] scaffold0671 (1 HSPs)
scaffold0671 (124-174)||(4942-4992)
[»] scaffold0261 (1 HSPs)
scaffold0261 (28-94)||(6620-6686)
[»] scaffold0031 (1 HSPs)
scaffold0031 (144-213)||(127302-127373)
[»] scaffold0010 (1 HSPs)
scaffold0010 (102-174)||(126305-126376)
[»] scaffold0515 (1 HSPs)
scaffold0515 (123-174)||(5030-5081)
[»] scaffold0436 (1 HSPs)
scaffold0436 (123-174)||(8961-9012)
[»] scaffold0306 (1 HSPs)
scaffold0306 (123-174)||(5030-5081)
[»] scaffold0138 (2 HSPs)
scaffold0138 (123-174)||(21098-21149)
scaffold0138 (123-174)||(34113-34164)
[»] scaffold0123 (1 HSPs)
scaffold0123 (123-174)||(7278-7329)
[»] scaffold0057 (1 HSPs)
scaffold0057 (123-174)||(69853-69904)
[»] scaffold0056 (2 HSPs)
scaffold0056 (123-174)||(67122-67173)
scaffold0056 (123-187)||(18276-18340)
[»] scaffold0040 (1 HSPs)
scaffold0040 (127-174)||(106051-106098)
[»] scaffold0002 (1 HSPs)
scaffold0002 (124-174)||(398564-398614)
[»] scaffold0601 (1 HSPs)
scaffold0601 (137-174)||(196-233)
[»] scaffold0505 (1 HSPs)
scaffold0505 (144-185)||(4958-4999)
[»] scaffold0075 (1 HSPs)
scaffold0075 (102-174)||(60874-60947)
[»] scaffold0878 (1 HSPs)
scaffold0878 (123-212)||(3383-3473)
[»] scaffold0156 (1 HSPs)
scaffold0156 (57-168)||(16532-16650)
[»] scaffold0017 (1 HSPs)
scaffold0017 (123-171)||(26728-26776)
[»] scaffold0070 (1 HSPs)
scaffold0070 (162-201)||(11193-11232)
[»] scaffold0042 (1 HSPs)
scaffold0042 (123-174)||(29389-29440)
[»] scaffold0034 (1 HSPs)
scaffold0034 (123-174)||(29216-29267)
[»] scaffold0008 (1 HSPs)
scaffold0008 (123-174)||(135504-135554)
[»] scaffold0003 (1 HSPs)
scaffold0003 (123-170)||(96399-96446)
[»] scaffold0589 (1 HSPs)
scaffold0589 (124-174)||(4387-4437)
[»] scaffold0061 (2 HSPs)
scaffold0061 (123-185)||(14575-14637)
scaffold0061 (123-185)||(23633-23695)
[»] scaffold0058 (1 HSPs)
scaffold0058 (137-170)||(6383-6416)
[»] scaffold0046 (1 HSPs)
scaffold0046 (137-174)||(21777-21814)
[»] scaffold0369 (1 HSPs)
scaffold0369 (152-213)||(15576-15638)
[»] scaffold0819 (1 HSPs)
scaffold0819 (123-174)||(5368-5418)
[»] scaffold0625 (1 HSPs)
scaffold0625 (123-174)||(5861-5912)
[»] scaffold0251 (1 HSPs)
scaffold0251 (123-174)||(20086-20136)
[»] scaffold0175 (1 HSPs)
scaffold0175 (123-174)||(8644-8694)
[»] scaffold0439 (1 HSPs)
scaffold0439 (58-108)||(12323-12373)
[»] scaffold0086 (1 HSPs)
scaffold0086 (126-213)||(35145-35234)
[»] scaffold0065 (1 HSPs)
scaffold0065 (124-174)||(52544-52594)
[»] scaffold0859 (1 HSPs)
scaffold0859 (59-108)||(4612-4661)
[»] scaffold0555 (1 HSPs)
scaffold0555 (144-189)||(8731-8776)
[»] scaffold0007 (1 HSPs)
scaffold0007 (126-174)||(18701-18749)


Alignment Details
Target: chr1 (Bit Score: 184; Significance: 1e-99; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 19676598 - 19676823
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||    
T  19676598 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 19676697  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  19676698 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 19676797  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  19676798 ttctcacaagattcttctcttctctg 19676823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 21046214 - 21045992
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||           
T  21046214 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 21046115  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||    
T  21046114 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgcacctc 21046015  T
Q  209 ttctcacaagattcttctcttct 231  Q
    |||||||||||||||||||||||    
T  21046014 ttctcacaagattcttctcttct 21045992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 20633799 - 20633571
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa----------ctac 105  Q
    ||||||||||||||||||||||||  ||||| || ||||||||||||||||||||||||||||||||||||| ||||||| |||||          ||||    
T  20633799 acatcaattctacacaaattcaacttattttttattctattaacaaccaattacaacttcaaaacctaattcccaaattcccataataactataacctac 20633700  T
Q  106 aacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactc 205  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||    
T  20633699 aacatgctaaactcaatttcagaattatacaacttagaattagagcaagttagtcccacccttatcttaaattagatgatcggactctacaagattgctc 20633600  T
Q  206 ctcttctcacaagattcttctcttctctg 234  Q
     ||||||||||||||||||||||||||||    
T  20633599 atcttctcacaagattcttctcttctctg 20633571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 16058478 - 16058287
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||           
T  16058478 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaa-cctaattcccaaatttccataactacaacctacaac 16058380  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  16058379 atgctaaactcaatttcagaattatacaacttagaattagagaaatttagtcccacccttaccttagattagatgatcggactctacaagatt 16058287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 42912936 - 42913101
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||| || ||       |||||||    
T  42912936 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcctaaattcccacaactacaacctacaac 42913035  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42913036 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 42913101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 28476785 - 28476674
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    ||||||||||||||||| |  ||||||||||  ||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||||||||||||||||    
T  28476785 ttcagaattatacaactcattattagagaaatctagtcccacccttaccttagattagatgaccggactctgcaagattgctcctcttctcacaagattc 28476686  T
Q  223 ttctcttctctg 234  Q
    ||| ||||||||    
T  28476685 ttcccttctctg 28476674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 12710868 - 12710979
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    ||||||||||||||||  |  ||||||||||| |||||||| | |||||||| |||||||||| ||||||||||||||| |||||||||||| |||||||    
T  12710868 ttcagaattatacaacccaatattagagaaagctagtcccatctttaccttagattagatgatgggactctacaagattgctcctcttctcataagattc 12710967  T
Q  223 ttctcttctctg 234  Q
    ||||||||||||    
T  12710968 ttctcttctctg 12710979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 41225484 - 41225394
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||| |||| ||||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  41225484 attaaagaaggttagtcccacccttaccttaaattagatgatcgtactcgacaagattgctcctcttctcacaagattcttctcttctctg 41225394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 41226737 - 41226647
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||| |||| ||||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  41226737 attaaagaaggttagtcccacccttaccttaaattagatgatcgtactcgacaagattgctcctcttctcacaagattcttctcttctctg 41226647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 20588660 - 20588748
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctc 232  Q
    ||||||||||| || |||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  20588660 attagagaaagctaatcccacccttaccttaaattggatgatcggactctacaagattgctcctcttctcacagtattcttctcttctc 20588748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 20593198 - 20593286
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctc 232  Q
    ||||||||||| || |||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  20593198 attagagaaagctaatcccacccttaccttaaattggatgatcggactctacaagattgctcctcttctcacagtattcttctcttctc 20593286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 21168825 - 21168985
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcata-------actacaacatgc 112  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||| ||  || | |||||||||| |||| ||||||| || |       || |||||||||    
T  21168825 caattgtacacaaattcaatggattttctactctattaaaaacaaaa-actaattcaaaaccttattcccaaattcacaaattcacaaacaacaacatgc 21168923  T
Q  113 taaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||| || ||||||||||||| || ||||||||||||||| | ||||||||||||||    
T  21168924 taaactcaattttagaattatacaacctaaaattagagaaagttaattccacccttacctta 21168985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 24723475 - 24723351
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattctcaaattctcataactacaa-------catgctaaactcaaattcagaattatacaacttagaattaga 149  Q
    ||||||||||||||||||| |||| |||||||||||||  || ||||||||       | || |||| |||  |||||||| ||||||||||||||||||    
T  24723475 aacaaccaattacaacttctaaacataattctcaaatttccaaaactacaatctaccacctgttaaattcagtttcagaatcatacaacttagaattaga 24723376  T
Q  150 gaaagttagtcccacccttacctta 174  Q
    |||||||||||||||||||||||||    
T  24723375 gaaagttagtcccacccttacctta 24723351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 7051973 - 7051922
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7051973 ttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 7051922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 8306610 - 8306697
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctc 213  Q
    |||||||||||||  |  ||||||||||| ||||||||| ||||||||| ||||||||||||| |||||| ||||| |||||||||||    
T  8306610 agaattatacaacccattattagagaaagctagtcccactcttaccttagattagatgatcggtctctacgagattgctcctcttctc 8306697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 51336480 - 51336531
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51336480 ttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 51336531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 51324396 - 51324556
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgc-------t 113  Q
    |||||||||| |||||||  ||||||||||| |   ||||||||||||||||||  ||||||||||| ||| ||| || ||||||||| | |       |    
T  51324396 aattctacaccaattcaatagattttctactattaaaacaaccaattacaacttttaaacctaattcccaatttcccaaaactacaacctaccacctgtt 51324495  T
Q  114 aaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||  ||  |||||||| ||||||||||||||||| ||||||||||| |||||||||||||    
T  51324496 aaatccagtttcagaatcatacaacttagaattagggaaagttagtctcacccttacctta 51324556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 12327794 - 12327743
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  12327794 ttcagaatcatacaacttagaattagagaaagttagtctcacccttacctta 12327743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 13302903 - 13302954
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  13302903 ttcagaattataccacttagaattagagaaagttagtctcacccttacctta 13302954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 21239100 - 21239049
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  21239100 ttcagaatcatacaacttagaattagagaaagttagtcccacccatacctta 21239049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 45499342 - 45499439
Alignment:
Q  71 acttcaaaacctaattctcaaattctcataactacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    ||||||||||||||||| ||||||| || ||  |||| ||||||||||||| |||||||||||||||| || ||||||||| ||||| | ||||||||||    
T  45499342 acttcaaaacctaattcccaaattcaca-aataacaatatgctaaactcaatttcagaattatacaacctaaaattagagagagttaat-ccacccttac 45499439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 4595904 - 4595853
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  4595904 ttcagaattatacctcttagaattagagaaagttagtctcacccttacctta 4595853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 29763683 - 29763632
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  29763683 ttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 29763632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 46197796 - 46197745
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  46197796 ttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 46197745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 42697786 - 42697836
Alignment:
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  42697786 tcagaattatacaacttagaattaaagaaggttagtctcacccttacctta 42697836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 22350735 - 22350820
Alignment:
Q  141 agaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttct 231  Q
    |||||||  ||| ||||||||||||||||||||| |||    ||||||||||||||||||| |||||| ||||| ||||||||||| ||||    
T  22350735 agaattattgaaggttagtcccacccttaccttagatt----gatcggactctacaagattgctcctc-tctcataagattcttcttttct 22350820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 50001477 - 50001528
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||| ||||||||||||||||||||||||||    
T  50001477 ttcagaattaaaatacttagaattaaagaaagttagtcccacccttacctta 50001528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 17901845 - 17901754
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgat--cggactctacaagattactcctcttctc 213  Q
    ||||||||||||||||  |  ||||||||||| ||||| ||||||||||||| | ||||||||  ||||||||| ||| || |||||||||||    
T  17901845 ttcagaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgattccggactcta-aagcttgctcctcttctc 17901754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 22145717 - 22145666
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |||||  |  |||||||||||||||||||||||||||||||    
T  22145717 ttcagaattaaacaacccattattagagaaagttagtcccacccttacctta 22145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 44822145 - 44822094
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac 108  Q
    ||||||||||||||||||| ||||||||||| ||||||  || |||||||||    
T  44822145 aacaaccaattacaacttctaaacctaattcccaaatttccagaactacaac 44822094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 6834177 - 6834268
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgat--cggactctacaagattactcctcttctc 213  Q
    ||||||||||||||||| |  ||||||||||| ||||  ||||||| ||||| | ||||||||  ||||||||| ||| || |||||||||||    
T  6834177 ttcagaattatacaactcattattagagaaagctagtatcacccttgccttagaatagatgattccggactcta-aagcttgctcctcttctc 6834268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 635052 - 635004
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| ||  ||||||||||| ||||| |||||||||||||    
T  635052 agaattatacaacctattattagagaaagctagtctcacccttacctta 635004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 24727383 - 24727419
Alignment:
Q  138 cttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |||| |||||||||||||||||||||    
T  24727383 cttagaattaaagaaggttagtcccacccttacctta 24727419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 38056723 - 38056667
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatatta 179  Q
    ||||||||||||||||  |  | ||||||||| ||||||||||||||||||| ||||    
T  38056723 ttcagaattatacaacccattactagagaaagctagtcccacccttaccttagatta 38056667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 45499564 - 45499634
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgat--cggactctacaagattactcctcttctc 213  Q
    ||||||||||| ||||| ||||||||||||| |||| |||||  ||||||||| ||| || |||||||||||    
T  45499564 attagagaaagctagtctcacccttaccttagattatatgattccggactcta-aagcttgctcctcttctc 45499634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 180; Significance: 3e-97; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 12465425 - 12465200
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||           
T  12465425 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 12465326  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  12465325 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 12465226  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  12465225 ttctcacaagattcttctcttctctg 12465200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 12372161 - 12372386
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||           
T  12372161 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctgcaac 12372260  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  12372261 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 12372360  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||| ||||||||||||||||||||||    
T  12372361 ttcacacaagattcttctcttctctg 12372386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 8851324 - 8851099
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||           
T  8851324 acatcaattctacacaaattcaacagattttatactctattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaac 8851225  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  8851224 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcatc 8851125  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  8851124 ttctcacaagattcttctcttctctg 8851099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 32433754 - 32433529
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||           
T  32433754 acatcacttctacacaaattcaactaattttctactctattaacaaccaattacaacttcaaaacctaattcacaaattcacataactacaacctacaac 32433655  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  32433654 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattgctcctc 32433555  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  32433554 ttctcacaagattcttctcttctctg 32433529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 12323095 - 12322870
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||           
T  12323095 acatcaattctacacaaattcaacggattttctattctattaacaaccaagtacaacttcaaaacctaattcccaaatttccataactacaacctacaac 12322996  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||     
T  12322995 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagttccacccttaccttaaattagatgatcggactctacaagattgctcctt 12322896  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  12322895 ttctcacaagattcttctcttctctg 12322870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 16999320 - 16999548
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaa-ttctcataactacaacat---- 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||||        
T  16999320 acatcaattctacacaaattcaacggattttctactctattaacaaccgattacaacttcaaaacctaattcccaaaattcccataactacaacatataa 16999419  T
Q  111 ---gctaaactcaaattcagaattatacaactta--gaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactc 205  Q
       ||||||||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  16999420 catgctaaactcaatttcagaattatacaacttatagaattagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattactc 16999519  T
Q  206 ctcttctcacaagattcttctcttctctg 234  Q
    |||||||||||||||||||||||||||||    
T  16999520 ctcttctcacaagattcttctcttctctg 16999548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 16 - 228
Target Start/End: Complemental strand, 13147637 - 13147418
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||           
T  13147637 acatcacttctacacaaattcaacggattttctactttattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 13147538  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  13147537 atgctaaactcaatttcagaattatataacttagaattagagaaagttagtcccacccttaccttaatttagatgatcggactctacaagattgctcctc 13147438  T
Q  209 ttctcacaagattcttctct 228  Q
    ||||||||||||||||||||    
T  13147437 ttctcacaagattcttctct 13147418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 11067355 - 11067580
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||| |||| ||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||| ||||||| |||||||||       |||    
T  11067355 acatcacttctccacaaattcaacgaattttctactctattaacaaccaattactacatcaaaacctaattcccaaattcccataactacaacctacaac 11067454  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  11067455 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcggactctataagattgctcctc 11067554  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||| ||||||||||||||||    
T  11067555 ttctcacaatattcttctcttctctg 11067580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 12127328 - 12127124
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||  ||||||||       ||||    
T  12127328 acataaattctacacaaattcaacgaattttctactctcttaacaaccaattacaacttcaaaacctaattcccaaatttccataactaaaacctacaac 12127229  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||    
T  12127228 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcggtctctacgagattgctcctc 12127129  T
Q  209 ttctc 213  Q
    |||||    
T  12127128 ttctc 12127124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 228
Target Start/End: Complemental strand, 46386253 - 46386038
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||       ||||    
T  46386253 acatcaattctacacaaattcaacggaatttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 46386154  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||    |||||| || |||||||||| ||| ||    
T  46386153 atattaaactcaatttcagaattatacaacttagaattagagaaagttagtcctacccttatcttagat----tgatcgaacactacaagattgctcatc 46386058  T
Q  209 ttctcacaagattcttctct 228  Q
    ||||||||||||| ||||||    
T  46386057 ttctcacaagattattctct 46386038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 20620173 - 20620338
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||       |||||||    
T  20620173 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaacctacaac 20620272  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20620273 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttacctta 20620338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 14180563 - 14180398
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||           
T  14180563 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacataattcccaaattcccataactacaacctacaat 14180464  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  14180463 atgctaaactcaatttcagaattatacaacttagaattagagaaaattagtcacacccttacctta 14180398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 20214034 - 20214204
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||       |||||||    
T  20214034 acatcaattgtacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 20214133  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatatta 179  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  20214134 atgctaaactcaatttcagaattatacaactcagaatttgagaaagttagtcccacccttaccttagatta 20214204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 10277215 - 10277375
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  10277215 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 10277313  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    |||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10277314 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 10277375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 20586239 - 20586404
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||  | ||||| |||||       |||||||    
T  20586239 acatcaattctacacaaattcaacggattttctactctattaacaaccaattgcaacttcaaaccctagtttcctaattcccataactacaacctacaac 20586338  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20586339 atggtaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 20586404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 24270112 - 24269947
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctca-------taactacaac 108  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||        ||| |||||    
T  24270112 acatcaattgtacacaaattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaacttcacaaattcacaaacaacaac 24270013  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  24270012 atgctaaactcaatttcagaattatacaacttaaaattagagaaagttaatcccacccttacctta 24269947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 43276795 - 43276685
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    ||||||||||||||||  |  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  43276795 ttcagaattatacaacccattattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattc 43276696  T
Q  223 ttctcttctct 233  Q
    |||||||||||    
T  43276695 ttctcttctct 43276685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 19283057 - 19283167
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    ||||||||||||||||  |   |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  19283057 ttcagaattatacaacccattcttagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattactccttttctcacaagattc 19283156  T
Q  223 ttctcttctct 233  Q
    |||||||||||    
T  19283157 ttctcttctct 19283167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 33002053 - 33002205
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactca 120  Q
    |||||||||| |||||||| |||| |||||| |   ||||||||||||||||||| || |||||||| ||||||| || ||||||||| || ||||  ||    
T  33002053 aattctacaccaattcaacagattctctactattacaacaaccaattacaacttctaaccctaattcccaaattccca-aactacaacctgttaaatcca 33002151  T
Q  121 aattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    | |||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  33002152 atttcagaatcatacaacttagaattagagaaagttagtccgacccttacctta 33002205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 44374833 - 44374934
Alignment:
Q  112 ctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttc 211  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| |||||| ||||| |||||||||    
T  44374833 ctaaactcaatttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcggtctctacgagattgctcctcttc 44374932  T
Q  212 tc 213  Q
    ||    
T  44374933 tc 44374934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 44383698 - 44383799
Alignment:
Q  112 ctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttc 211  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| |||||| ||||| |||||||||    
T  44383698 ctaaactcaatttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcggtctctacgagattgctcctcttc 44383797  T
Q  212 tc 213  Q
    ||    
T  44383798 tc 44383799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 58443 - 58353
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  58443 attagagaaagctagtcccacccttaccttagattagatgatcggaatctacaagattgttcctcttctcacaagattcttctcttctctg 58353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 19195612 - 19195725
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc--ttctcacaagat 220  Q
    ||||||||||||||||| |  ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||  |||||   |||||||||||    
T  19195612 ttcagaattatacaactcattattagagaaagctagtcccacccttaccttagattagatgatcggactctacaagattgttcctcctatctcacaagat 19195711  T
Q  221 tcttctcttctctg 234  Q
    ||||||||||||||    
T  19195712 tcttctcttctctg 19195725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 128 - 233
Target Start/End: Complemental strand, 18074693 - 18074588
Alignment:
Q  128 aattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctc 227  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||| |||||||| |||||||||||||||||  || |||||||||||||||||||||    
T  18074693 aattataccacttagaattagagaaagttaatcccactcttaccttaaattagatggtcggactctacaagattgatcttcttctcacaagattcttctc 18074594  T
Q  228 ttctct 233  Q
    | ||||    
T  18074593 tcctct 18074588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 12754663 - 12754553
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||  |||   ||| | ||||||||||||| ||||||||||||||||||||    
T  12754663 ttcagaatcatataacttagaattagagaaagttagtcccacccttaccttaggttaatcgat-gaactctacaagattgctcctcttctcacaagattc 12754565  T
Q  223 ttctcttctctg 234  Q
    ||||||||||||    
T  12754564 ttctcttctctg 12754553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 47974871 - 47974760
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||  |||   ||||| ||||||||| ||| ||||||||||||||||||||    
T  47974871 ttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttaggttaatcgatcgaactctacaatattgctcctcttctcacaagattc 47974772  T
Q  223 ttctcttctctg 234  Q
    || |||||||||    
T  47974771 ttttcttctctg 47974760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 14160886 - 14160796
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||| |||| |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  14160886 attaaagaaggttagtcccacccttatcttaaattagatgatcggactctacaagattgctcctcttcacacaagattcttctcttctctg 14160796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 32160251 - 32160140
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    |||||||||| |  ||||||||||||||||||||||||  ||||||||||||  |||   ||||| ||||||||||||| ||||||||||||||||||||    
T  32160251 ttcagaattaaattacttagaattagagaaagttagtcttacccttaccttaggttaatcgatcgaactctacaagattgctcctcttctcacaagattc 32160152  T
Q  223 ttctcttctctg 234  Q
    ||||||||||||    
T  32160151 ttctcttctctg 32160140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 4690714 - 4690650
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  4690714 ttcagaattatacaacttagaattagagaaagttagtcccacctttaccttaggttagatgatcg 4690650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 8488142 - 8488034
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttc 225  Q
    |||||||||||||  |  |||||||||||||||||||||||||||||||  |||   ||||| ||| |||||||||  || |||||||||||||||||||    
T  8488142 agaattatacaacccattattagagaaagttagtcccacccttaccttaggttaatcgatcgaactttacaagattgttcttcttctcacaagattcttc 8488043  T
Q  226 tcttctctg 234  Q
    |||||||||    
T  8488042 tcttctctg 8488034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 8513801 - 8513693
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttc 225  Q
    |||||||||||||  |  |||||||||||||||||||||||||||||||  |||   ||||| ||| |||||||||  || | |||||||||||||||||    
T  8513801 agaattatacaacccattattagagaaagttagtcccacccttaccttaggttaatcgatcgaactttacaagattgttcttattctcacaagattcttc 8513702  T
Q  226 tcttctctg 234  Q
    |||||||||    
T  8513701 tcttctctg 8513693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 170
Target Start/End: Original strand, 25943041 - 25943166
Alignment:
Q  52 ctattaacaaccaattacaacttcaaaacctaattctcaaattctcata-------actacaacatgctaaactcaaattcagaattatacaacttagaa 144  Q
    |||||||||||||||||| ||||||||||||||||  ||||||| || |       || ||||||||||||| |||| ||||||||||||||||  | ||    
T  25943041 ctattaacaaccaattacgacttcaaaacctaatttccaaattcacaaattcacaaacaacaacatgctaaattcaatttcagaattatacaacccaaaa 25943140  T
Q  145 ttagagaaagttagtcccacccttac 170  Q
    ||||||||||||| ||||||| ||||    
T  25943141 ttagagaaagttaatcccaccgttac 25943166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 48807376 - 48807325
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48807376 ttcagaattataccacttagaattagagaaagttagtcccacccttacctta 48807325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 13744728 - 13744662
Alignment:
Q  104 acaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    ||||||||||||||| || |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  13744728 acaacatgctaaacttaatttcagaattatacaacctaaaattagagaaagttaatcccacccttac 13744662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 38299749 - 38299841
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    ||||||||||||||||  |  ||||||||||| ||||||||||||||||||| |||||||||  || ||||||||||| || |||||||||||    
T  38299749 ttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattagatgatttcagactctacaagcttgctcctcttctc 38299841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 16078331 - 16078383
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttat 175  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  16078331 ttcataattataccacttagaattagagaaagttagtcccacccttaccttat 16078383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 14218946 - 14218895
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  14218946 ttcagaattataccacttagaattagagaaagttagtctcacccttacctta 14218895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 35771492 - 35771441
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  35771492 ttcagaattatatcacttagaattagagaaagttagtcccacccttacctta 35771441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 16214511 - 16214581
Alignment:
Q  159 tcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctctt 229  Q
    ||||||||||||||||  |||   ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  16214511 tcccacccttaccttaggttaatcgatcgaactctacaagattgctcctcttctcacaagattcttctctt 16214581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 15119337 - 15119248
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctct 233  Q
    |||| |||| |||||||| ||||||||||||  |||   ||||  ||||||||||||| ||||||||||||||| |||||||||||||||    
T  15119337 attaaagaaggttagtcctacccttaccttaggttaatcgatcaaactctacaagattgctcctcttctcacaatattcttctcttctct 15119248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 10658923 - 10658851
Alignment:
Q  102 ctacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||| ||| ||||  ||| |||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  10658923 ctacaaaatgttaaatccaatttcagaatcatacaacttagaattaaagaaggttagtcccacccttacctta 10658851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 13744540 - 13744469
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgat--cggactctacaagattactcctcttctc 213  Q
    ||||||||||| ||||||||||||||||||| ||||||||||  | ||||||||||| || |||||||||||    
T  13744540 attagagaaagctagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctc 13744469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 4071821 - 4071872
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  4071821 ttcagagttatatcacttagaattagagaaagttagtcccacccttacctta 4071872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 29052233 - 29052182
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  29052233 ttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 29052182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 14156410 - 14156353
Alignment:
Q  156 tagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctc 213  Q
    ||||||||||||||||||| ||||||| |||||  ||||||||||| |||||||||||    
T  14156410 tagtcccacccttaccttagattagattatcggtatctacaagattgctcctcttctc 14156353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 25943289 - 25943330
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgat 185  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  25943289 attagagaaagctagtcccacccttaccttatattagatgat 25943330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 36704642 - 36704566
Alignment:
Q  103 tacaacatgctaaactcaaatt-cagaattatacaacttagaattagagaaagttagtcccacccttaccttatatta 179  Q
    ||||||||| |||| ||||||| |||||||| |||||||| ||||| |||| ||||||||||||||||||||| ||||    
T  36704642 tacaacatgttaaa-tcaaatttcagaattacacaacttaaaattaaagaaggttagtcccacccttaccttagatta 36704566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 8135359 - 8135238
Alignment:
Q  59 caaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaacatgctaaactcaaattcagaattatacaacttagaattagaga 151  Q
    ||||||||||||||||| |||||||||||||||||||  | ||       ||||||| || |||| |||| |||||||| |||| |||||| ||||| ||    
T  8135359 caaccaattacaacttctaaacctaattctcaaattcctaaaactacaacctacaacctgttaaattcaatttcagaatcatac-acttaggattagtga 8135261  T
Q  152 aagttagtcccacccttacctta 174  Q
    | ||||||| |||||||||||||    
T  8135260 aggttagtctcacccttacctta 8135238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 43745657 - 43745721
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    |||| |||||||||||| |  ||||||||||| |||||||||||||||||||  |||||||||||    
T  43745657 ttcataattatacaactcattattagagaaagctagtcccacccttaccttaggttagatgatcg 43745721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 15289106 - 15289157
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||| |||||  |||||||||||||||||||| |||||||||||||||||    
T  15289106 ttcagagttataatacttagaattagagaaagttggtcccacccttacctta 15289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 16250273 - 16250222
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||| |||||||||||| |  |||||||||||||||||||||||||||||||    
T  16250273 ttcaaaattatacaactcattattagagaaagttagtcccacccttacctta 16250222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 16550056 - 16550005
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||| ||||||||||    
T  16550056 ttcagaattaaaatacttagaattagagaaagttagtcccaaccttacctta 16550005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 16615606 - 16615657
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||| ||||||||||    
T  16615606 ttcagaattaaaatacttagaattagagaaagttagtcccaaccttacctta 16615657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 18955331 - 18955382
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||  |||||||||||||||||||||||| |||| ||||||||    
T  18955331 ttcagaattataacacttagaattagagaaagttagtctcacctttacctta 18955382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 25942358 - 25942401
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaac 59  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  25942358 acatcaattgtacacaaattcaatggattttctactctattaac 25942401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 15095759 - 15095637
Alignment:
Q  59 caaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgc-------taaactcaaatt-cagaattatacaacttagaattagag 150  Q
    |||| |||||||||||| ||||||||||| ||||||| || ||||||||| | |       |||| |||| || |||||| ||||| ||||||||||| |    
T  15095759 caactaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcataca-cttagaattagtg 15095661  T
Q  151 aaagttagtcccacccttacctta 174  Q
    || |||||||||||||||||||||    
T  15095660 aaggttagtcccacccttacctta 15095637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 37539470 - 37539541
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgat--cggactctacaagattactcctcttctc 213  Q
    |||| |||| ||||||||||||||||| ||| ||||||||||  | ||||||||||| || |||||||||||    
T  37539470 attatagaatgttagtcccacccttactttagattagatgattacagactctacaagcttgctcctcttctc 37539541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 3287745 - 3287796
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||||| ||  ||||||||||| ||||| |||||||||||||    
T  3287745 ttcagaattatacaacctattattagagaaagctagtctcacccttacctta 3287796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 13698689 - 13698638
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||  ||||||| ||||| ||||||||||||| ||||||||||||    
T  13698689 ttcagaattaatcaacttaaaattaaagaaagttagtcctacccttacctta 13698638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 15623950 - 15623997
Alignment:
Q  60 aaccaattacaacttcaaaacctaattctcaaattctcataactacaa 107  Q
    |||||||||||||| | ||||||||||||||||||| || ||||||||    
T  15623950 aaccaattacaactcctaaacctaattctcaaattcccaaaactacaa 15623997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 18990848 - 18990899
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||  |||||||||||||||||||||||  |||| ||||||||    
T  18990848 ttcagaattataacacttagaattagagaaagttagtatcacctttacctta 18990899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 20252233 - 20252182
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||| |  ||||||||||| |||||| ||||||||||||    
T  20252233 ttcagaattatacaactcattattagagaaagctagtcctacccttacctta 20252182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 14928340 - 14928290
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctt 173  Q
    |||||||||| | ||||||||||||  ||| ||||||||||||||||||||    
T  14928340 ttcagaattaaagaacttagaattactgaaggttagtcccacccttacctt 14928290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 15351806 - 15351756
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctt 173  Q
    |||||||||| | ||||||||||||  ||| ||||||||||||||||||||    
T  15351806 ttcagaattaaagaacttagaattactgaaggttagtcccacccttacctt 15351756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 8930795 - 8930754
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgat 185  Q
    ||||||||||  ||||||||||||||||||| ||||||||||    
T  8930795 attagagaaatgtagtcccacccttaccttagattagatgat 8930754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 13315133 - 13315041
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    |||||||| |||||||  |  ||||||||||| ||||| ||||||||||||| ||||||| |  || ||||||||||| || ||||| |||||    
T  13315133 ttcagaatcatacaacccattattagagaaagatagtctcacccttaccttagattagattatttcagactctacaagcttgctcctattctc 13315041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 15140143 - 15140192
Alignment:
Q  59 caaccaattacaacttcaaaacctaattctcaaattctcataactacaac 108  Q
    ||||||||||||||||  ||||||||||| ||||||| || |||||||||    
T  15140143 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaac 15140192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 176; Significance: 6e-95; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 7827859 - 7828084
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||       |||    
T  7827859 acatcaattctacacaaattcaaccgattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 7827958  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  7827959 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 7828058  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  7828059 ttctcacaagattcttctcttctctg 7828084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 19655396 - 19655171
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||           
T  19655396 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 19655297  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  19655296 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattgctcatc 19655197  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  19655196 ttctcacaagattcttctcttctctg 19655171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 23150452 - 23150227
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||           
T  23150452 acatcaattctacacaaattcaacaaattttatactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 23150353  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  23150352 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 23150253  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||| ||||||||||||    
T  23150252 ttctcacaagatttttctcttctctg 23150227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 18703451 - 18703680
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaatta----caacttcaaaacctaattctcaaattctcataactacaac--- 108  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||    ||||||||||| ||||||| ||||||| ||||||||||||       
T  18703451 acatcacttctatacaaattcaacggattttctactctattaacaaccaattaattacaacttcaaaatctaattcccaaattcccataactacaaccta 18703550  T
Q  109 ----atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattact 204  Q
        || |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  |    
T  18703551 caacattctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttaccttaaattagatgatcggactctacaagattgtt 18703650  T
Q  205 cctcttctcacaagattcttctcttctctg 234  Q
    |||||||||| |||||||||||||||||||    
T  18703651 cctcttctcataagattcttctcttctctg 18703680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 18709386 - 18709615
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaatta----caacttcaaaacctaattctcaaattctcataactacaac--- 108  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||    ||||||||||| ||||||| ||||||| ||||||||||||       
T  18709386 acatcacttctatacaaattcaacggattttctactctattaacaaccaattaattacaacttcaaaatctaattcccaaattcccataactacaaccta 18709485  T
Q  109 ----atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattact 204  Q
        || |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  |    
T  18709486 caacattctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttaccttaaattagatgatcggactctacaagattgtt 18709585  T
Q  205 cctcttctcacaagattcttctcttctctg 234  Q
    |||||||||| |||||||||||||||||||    
T  18709586 cctcttctcataagattcttctcttctctg 18709615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 16 - 233
Target Start/End: Complemental strand, 27125642 - 27125419
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||||||||           
T  27125642 acatcacttctatacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaagtcccaaattcccataactacaacctacaac 27125543  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||| ||||| || ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  27125542 atgctaatctcaattttagacttatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattgctcatc 27125443  T
Q  209 ttctcacaagattcttctcttctct 233  Q
    ||||||||| |||| ||||||||||    
T  27125442 ttctcacaaaattc-tctcttctct 27125419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 15890877 - 15890712
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  || ||       |||||||    
T  15890877 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattaacaaaactacaacctacaac 15890778  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15890777 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 15890712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 27330131 - 27329981
Alignment:
Q  31 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caacatgctaaactcaaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||       ||||||| ||||||||| |    
T  27330131 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaactcaatt 27330032  T
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  27330031 tcagaattatacaacctagaattagagaaagttagtcacactcttacctta 27329981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 27390871 - 27390721
Alignment:
Q  31 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caacatgctaaactcaaat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||       ||||||| ||||||||| |    
T  27390871 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaactcaatt 27390772  T
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  27390771 tcagaattatacaacctagaattagagaaagttagtcacactcttacctta 27390721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 30673556 - 30673402
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaa-ttacaacttcaaaacctaattctcaaattctcataactacaacatgctaaact 118  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||| |||| | |||||||||||||||  |||||| || ||| ||| |||||||||||    
T  30673556 caattgtacacaaattcaatgaattttctactctattaacaaccaaattactaattcaaaacctaattccaaaattcaca-aacaacatcatgctaaact 30673458  T
Q  119 caaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||| |||| ||||||||||| || ||||||||||||||| ||||||||||||||||    
T  30673457 caatttcaaaattatacaacctaaaattagagaaagttaatcccacccttacctta 30673402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 20410563 - 20410452
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    ||||||||||||||||  |  ||||||||||| || | |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  20410563 ttcagaattatacaacccattattagagaaagctatttccacccttaccttaaattagatgatcgcactctacaagattgctcctcttctcacaagattc 20410464  T
Q  223 ttctcttctctg 234  Q
    ||||||||||||    
T  20410463 ttctcttctctg 20410452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 17318184 - 17318106
Alignment:
Q  156 tagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17318184 tagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 17318106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 19167998 - 19167853
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactc 119  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||         ||| ||||||||||||||||    
T  19167998 caattgtacacaaattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattccca---------aacaacaacatgctaaactc 19167908  T
Q  120 aaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||  ||||||||||||||| ||  |||||| ||||||| | ||||||||||||||    
T  19167907 aatatcagaattatacaacctaatattagacaaagttaattccacccttacctta 19167853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 19235015 - 19235175
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacct-------aattctcaaattctcataactacaacatgc 112  Q
    ||||| ||||||| ||||| |||||||||||| ||||||||||||||||| ||||||||||||       ||||| ||||||| || ||| ||||||| |    
T  19235015 caattgtacacaagttcaatggattttctactttattaacaaccaattacgacttcaaaacctaatcccaaattcacaaattcaca-aacaacaacatcc 19235113  T
Q  113 taaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||| |||| |||||||||||||||| || ||||||||||||||| ||||||||||| ||||    
T  19235114 taaaatcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttaactta 19235175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 24267829 - 24267900
Alignment:
Q  102 ctacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctt 173  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24267829 ctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctt 24267900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 31734729 - 31734819
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||| |||| |||||||||||||||||||||  |||   ||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  31734729 attaaagaaggttagtcccacccttaccttaggttaatcgatcgaactctacaagattgctcctcttctcacaagattcttttcttctctg 31734819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 15998890 - 15998941
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15998890 ttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 15998941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 18585806 - 18585861
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatatt 178  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  18585806 ttcagaatcatacaacttagaattagagaaagttagtcccacccttaccatatatt 18585861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 28948466 - 28948627
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaatt-ctcataactacaacatgc------- 112  Q
    |||||||||| ||||||||  |||||||||| |   ||||||||||||||||||| ||||||||||| |||||| || | | ||||||| | |           
T  28948466 aattctacaccaattcaacatattttctactattaaaacaaccaattacaacttctaaacctaattcccaaatttctaaaacctacaacttaccacttgt 28948565  T
Q  113 taaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||  ||  |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  28948566 taaatccagtttcagaatcatacaacttagaattagagaaagttagtctcacccttacctta 28948627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 19825537 - 19825447
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctc 213  Q
    ||||||||||| ||||  |  ||||||||||| ||||| ||||||||||||| ||||||||||||| |||||| ||||| |||||||||||    
T  19825537 ttcagaattatgcaacccattattagagaaagctagtctcacccttaccttagattagatgatcggtctctacgagattgctcctcttctc 19825447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 27572188 - 27572122
Alignment:
Q  108 catgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||| |||| |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  27572188 catgttaaattcaatttcagaattatacgacttagaattagagaaagttagtctcacccttacctta 27572122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 12041671 - 12041620
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  12041671 ttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 12041620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 18928682 - 18928733
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  18928682 ttcagaattataccacttagaattagagaaagttagtcctacccttacctta 18928733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 25922033 - 25922092
Alignment:
Q  154 gttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctc 213  Q
    ||||||||||||||||||||| ||||||||||||| |||||| ||||| |||||||||||    
T  25922033 gttagtcccacccttaccttagattagatgatcggtctctacgagattgctcctcttctc 25922092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 23431477 - 23431420
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    |||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  23431477 attaaagaaggttagtcccacgcttaccttagattagatgatcggactctacaagatt 23431420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 31731955 - 31731904
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||||||||    
T  31731955 ttcagaattataacacttagaattggagaaagttagtcccacccttacctta 31731904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 10446239 - 10446310
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    ||||||||||| ||||||||||||||||||| |||||||||  || ||||||||| | || |||||||||||    
T  10446239 attagagaaagctagtcccacccttaccttagattagatgatttcagactctacatgcttgctcctcttctc 10446310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 24550240 - 24550168
Alignment:
Q  102 ctacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| ||||  ||| |||||||||| |||||||| ||||| ||||  ||||||||||||||||||||    
T  24550240 ctacaacatgttaaatccaatttcagaattacacaacttacaattaaagaagtttagtcccacccttacctta 24550168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 29625191 - 29625231
Alignment:
Q  130 ttatacaacttagaattagagaaagttagtcccacccttac 170  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  29625191 ttatacaacgtagaattagagaaagttagtcccacccttac 29625231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 15173504 - 15173453
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||| ||||||||    
T  15173504 ttcagaattaaaatacttagaattagagaaagttagtcccaccattacctta 15173453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 13285749 - 13285841
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatg--atcggactctacaagattactcctcttctc 213  Q
    |||||||||||  |||| |  |||| |||| ||||||||||||||||||||| ||||||||   || ||||||||||| || |||||||||||    
T  13285749 ttcagaattatgaaactcatgattatagaaggttagtcccacccttaccttagattagatggtttcagactctacaagcttgctcctcttctc 13285841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 174
Target Start/End: Original strand, 19401028 - 19401146
Alignment:
Q  63 caattacaacttcaaaacctaattctcaaattctcataactacaacatgc-------taaactcaaatt-cagaattatacaacttagaattagagaaag 154  Q
    ||||||||||||  ||||||||||||||||||| || ||||||||| | |       |||| |||| || |||||| ||||| ||||||||||| ||| |    
T  19401028 caattacaacttataaacctaattctcaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcataca-cttagaattagtgaagg 19401126  T
Q  155 ttagtcccacccttacctta 174  Q
    ||||||||||||||||||||    
T  19401127 ttagtcccacccttacctta 19401146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 21683122 - 21683062
Alignment:
Q  127 gaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    ||||||||||||  |  ||||||||||| |||||||||||||||||||  |||||||||||    
T  21683122 gaattatacaacccattattagagaaagctagtcccacccttaccttaggttagatgatcg 21683062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 23658090 - 23658146
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatatta 179  Q
    |||||||||||||||| ||  ||||| ||||| ||||||||||||||||||| ||||    
T  23658090 ttcagaattatacaacctattattagggaaagctagtcccacccttaccttagatta 23658146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 15900705 - 15900654
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  |||||||||||||||||||| ||| |||||||||||||    
T  15900705 ttcagaattaaaatacttagaattagagaaagttggtctcacccttacctta 15900654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 18259328 - 18259266
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattc 87  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||| | ||||||||||||||    
T  18259328 tacacaaattctatggattttctattcaattaacaactaattacaattctcaaaacctaattc 18259266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 34140474 - 34140415
Alignment:
Q  156 tagtcccacccttaccttatattagatgat--cggactctacaagattactcctcttctc 213  Q
    ||||||||||||||||||| ||||||||||  |  |||||||||| || |||||||||||    
T  34140474 tagtcccacccttaccttagattagatgattacaaactctacaagcttgctcctcttctc 34140415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 34153090 - 34153031
Alignment:
Q  156 tagtcccacccttaccttatattagatgat--cggactctacaagattactcctcttctc 213  Q
    ||||||||||||||||||| ||||||||||  |  |||||||||| || |||||||||||    
T  34153090 tagtcccacccttaccttagattagatgattacaaactctacaagcttgctcctcttctc 34153031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 176; Significance: 6e-95; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 25091540 - 25091765
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||       |||    
T  25091540 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 25091639  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  25091640 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcgaactctacaagattgctcctc 25091739  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  25091740 ttctcacaagattcttctcttctctg 25091765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 53630639 - 53630414
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||           
T  53630639 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 53630540  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||  |||||    
T  53630539 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgttcctc 53630440  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    |||||||||||||||||| |||||||    
T  53630439 ttctcacaagattcttcttttctctg 53630414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 10356601 - 10356376
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||           
T  10356601 acatcaattctacacaaattcaacggattttctactctattaactaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 10356502  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| | ||||| ||||||||||||| ||||||    
T  10356501 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaaccttaccttaaattaaaagatcgaactctacaagattgctcctc 10356402  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  10356401 ttctcacaagattcttctcttctctg 10356376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 19610211 - 19610436
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||       |||    
T  19610211 acatcaattctacacaaatttaacggattttctactctattaacaaccaattacaacgtcaaaacttaattctcaaattcccataactacaacctacaac 19610310  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  19610311 atgctaaactcaatttcagaattatacaacttaaaattagagaaagttagtctcacccttaccttaaattagatgatcggattctacaagattactcctc 19610410  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||| ||||    
T  19610411 ttctcacaagattcttctcttttctg 19610436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 42875684 - 42875909
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||| |||||||||       |||    
T  42875684 acatcaattctacacaaattcaacggattttctactctattaacaatcaattacaacttcaaaacctatttcccaaattcccataactacaacctacaac 42875783  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||| ||| |||||||||| ||| ||||||    
T  42875784 atgctaaactcaatttcagaattatacaacttagaattatataaagttagtcccacccttaccttaaattagataatcagactctacaaaattgctcctc 42875883  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  42875884 ttctcacaagattcttctcttctctg 42875909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 16998412 - 16998637
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||       |||    
T  16998412 acatcaatactacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 16998511  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||   |||  | |||    
T  16998512 atgctaaactcaatttcataattatacaacttagaattagagaaagttagtctcactcttaccttaaattagatgatcggactctacggaattgtttctc 16998611  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  16998612 ttctcacaagattcttctcttctctg 16998637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 11425825 - 11426017
Alignment:
Q  11 gatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ct 103  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||       ||    
T  11425825 gatgaacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaatttcaaaacctaattcccaaattcccataactacaacct 11425924  T
Q  104 acaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctaca 196  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||| |||||||    
T  11425925 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatatgatgatcggtctctaca 11426017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 15115109 - 15115274
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||| ||||||| |||||       |||||||    
T  15115109 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaaaataattcccaaattcccataactacaacctacaac 15115208  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15115209 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 15115274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 37019561 - 37019722
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaacatgc 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       ||||||||||     
T  37019561 caattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatgt 37019660  T
Q  113 taaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  37019661 taaactcaatttcagaattatacaacttaaaattagagaaagttagtcacacccttacctta 37019722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 6633701 - 6633541
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||    
T  6633701 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 6633603  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    |||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  6633602 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 6633541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 46001695 - 46001535
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||    
T  46001695 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 46001597  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    |||||||||| || |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  46001596 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtctcacccttac 46001535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 9639011 - 9639122
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    |||||||||| |||||| |  ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  9639011 ttcagaattacacaactcattattagagaaagctagtcccacccttaccttagattagattatcggactctacaagatttctcctcttctcacaagattc 9639110  T
Q  223 ttctcttctctg 234  Q
    ||||||||||||    
T  9639111 ttctcttctctg 9639122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 12424341 - 12424230
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    ||||||||||||||||  |  ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  12424341 ttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgatcggactctacaagattgctcttcttctcacaagattc 12424242  T
Q  223 ttctcttctctg 234  Q
    ||||||||||||    
T  12424241 ttctcttctctg 12424230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 25513852 - 25513963
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    ||||||||||||||||| |  ||||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  25513852 ttcagaattatacaactcattattagagaaagctagtcccaccattaccttagattagatgatcagactctacaagattgctcctcttctcacaagattc 25513951  T
Q  223 ttctcttctctg 234  Q
    ||||||||||||    
T  25513952 ttctcttctctg 25513963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 10694296 - 10694185
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    |||||||||| |  ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  10694296 ttcagaattaaattacttagaattagagaaatttagtctcacccttaccttaaattagatgatcggactctacaagattgctcatcttctcacgagattc 10694197  T
Q  223 ttctcttctctg 234  Q
    ||||||||||||    
T  10694196 ttctcttctctg 10694185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 10908062 - 10907951
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    |||||||||| |  ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  10908062 ttcagaattaaattacttagaattagagaaatttagtctcacccttaccttaaattagatgatcggactctacaagattgctcatcttctcacgagattc 10907963  T
Q  223 ttctcttctctg 234  Q
    ||||||||||||    
T  10907962 ttctcttctctg 10907951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 19022366 - 19022456
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  19022366 attagagaaagttagtctcacctttaccttagattagatgatcggactctacaagattgctcctcttctcacaagattattctcttctctg 19022456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 40230328 - 40230418
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||| |||||||||||||||||||||||||| |||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||    
T  40230328 attaaagaaagttagtcccacccttaccttagattagatgattgaactctacaagattgctcctcttctcacaagattcttctcttctctg 40230418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 26921774 - 26921708
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaatt 94  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  26921774 cacaaattcattggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaatt 26921708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 44023633 - 44023547
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||| |||| ||||||| ||||||||||||| |||    ||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  44023633 attaaagaaggttagtcgcacccttaccttagatt----gatcggactctacaagattgctcctcttttcacaagattcttctcttctctg 44023547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 2424438 - 2424374
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  2424438 ttcaaaattatacaacttagaattagagaaagttagtctcacccttaccttaggttagatgatcg 2424374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 15613070 - 15613142
Alignment:
Q  102 ctacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| ||||  ||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  15613070 ctacaacatgttaaatccaatttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 15613142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 19434610 - 19434559
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19434610 ttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 19434559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 33186904 - 33186994
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctc 213  Q
    ||||||||||||||||  |  ||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||| ||| |||||| ||||    
T  33186904 ttcagaattatacaacccattattagagaaagctagtctcacccctaccttaaattagatgatcggactctacaaaattgctcctcctctc 33186994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 51993541 - 51993613
Alignment:
Q  102 ctacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| ||||  ||| |||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  51993541 ctacaacatgttaaatccaatttcagaattacacaacttagaattaaagaaggttagtcccacccttacctta 51993613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 9924155 - 9924206
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  9924155 ttcagaattataccacttagaattagagaaagttagtctcacccttacctta 9924206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 35811427 - 35811376
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  35811427 ttcaaaattataccacttagaattagagaaagttagtcccacccttacctta 35811376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 9870495 - 9870444
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  9870495 ttcagaattatacaacttagaattatggaaagttagtcccacccttagctta 9870444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 11478704 - 11478653
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||||||||| ||||||||| |||||||||||||    
T  11478704 ttcagaattataccacttagaattagaggaagttagtctcacccttacctta 11478653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 14549761 - 14549812
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||  ||||||||||||||||||||||||||||| |||||||||||||    
T  14549761 ttcagaaacatacaacttagaattagagaaagttagtctcacccttacctta 14549812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 15008964 - 15009015
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  15008964 ttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 15009015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 21175 - 21248
Alignment:
Q  102 ctacaacatgctaaactcaaat-tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |||| |||| | |||||||||||||||||||||||| |||| ||||||| || ||||||||||    
T  21175 ctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatccttacctta 21248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 21062656 - 21062693
Alignment:
Q  137 acttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21062656 acttagaattagagaaagttagtcccacccttacctta 21062693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 33243324 - 33243267
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    |||| |||| ||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  33243324 attaaagaatgttagtctcacccttaccttagattagatgatgggactctacaagatt 33243267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 10273405 - 10273476
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    ||||||||||| ||||||||||||||||||| |||||| ||  || ||||||||||| || |||||||||||    
T  10273405 attagagaaagctagtcccacccttaccttagattagacgatttcagactctacaagcttgctcctcttctc 10273476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 14186955 - 14187010
Alignment:
Q  118 tcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  14186955 tcaatttcagaatcataca-cttagaattagagaaagttactcccacccttacctta 14187010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 16296939 - 16296990
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||| |  ||||||||||| |||||||||||||||||||    
T  16296939 ttcagaattatacaactcattattagagaaagctagtcccacccttacctta 16296990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 40620533 - 40620584
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||| ||||||||||||||||    
T  40620533 ttcagaattaaaatacttagaattagagaaagttattcccacccttacctta 40620584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 55583218 - 55583289
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    ||||||||||| ||||||||||||||||||| ||  | |||  |||||||||||||| || |||||||||||    
T  55583218 attagagaaagctagtcccacccttaccttagataggttgaattcggactctacaagtttgctcctcttctc 55583289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 26014316 - 26014351
Alignment:
Q  154 gttagtcccacccttaccttatattagatgatcgga 189  Q
    ||||||||||||||||||||| ||||||||||||||    
T  26014316 gttagtcccacccttaccttagattagatgatcgga 26014351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 32466244 - 32466194
Alignment:
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||| |||||||||||||| ||||  |||||| |||||||||||||    
T  32466244 tcagaattacacaacttagaattaaagaagattagtctcacccttacctta 32466194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 14186067 - 14186104
Alignment:
Q  137 acttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  14186067 acttagaattaaagaaagttactcccacccttacctta 14186104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 13165154 - 13165225
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    |||| |||| ||||||||||||||||||||| ||| | |||  | |||||||||||| || |||||||||||    
T  13165154 attaaagaaggttagtcccacccttaccttagattggttgaatttggactctacaagtttgctcctcttctc 13165225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 26446208 - 26446272
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    ||||||||||||||||  |  ||||||||||| |||||| |||||||| |||  |||||||||||    
T  26446208 ttcagaattatacaacccattattagagaaagctagtcctacccttactttaggttagatgatcg 26446272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 173; Significance: 4e-93; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 24781005 - 24780783
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||           
T  24781005 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacttc 24780906  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  24780905 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 24780806  T
Q  209 ttctcacaagattcttctcttct 231  Q
    |||||||||||||||||||||||    
T  24780805 ttctcacaagattcttctcttct 24780783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 24436535 - 24436760
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||| |||||||||       |||    
T  24436535 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaatttccaaattcccataactacaacctacaac 24436634  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||    
T  24436635 atgctaaactcaatttcagaattatacaacttagaattcgagaaagttagtcccacccttatcttaaattagatgatcggactctacaagattgctcctc 24436734  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  24436735 ttctcacaagattcttctcttctctg 24436760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 5031297 - 5031072
Alignment:
Q  13 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac---- 108  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||        
T  5031297 tggacatcacttctacacaaattcaacgaattttatactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 5031198  T
Q  109 ---atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactc 205  Q
       ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||    
T  5031197 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgattggactctacaagattgctc 5031098  T
Q  206 ctcttctcacaagattcttctcttct 231  Q
     |||||||||||||||||||||||||    
T  5031097 atcttctcacaagattcttctcttct 5031072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 9975816 - 9976041
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||       |||    
T  9975816 acatcaattctacacaaattcagcggattgtctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 9975915  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||    
T  9975916 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtccaacccttaccttaaattagatgatcggactctacaagattgttcctc 9976015  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    |||||| |||||||||||||||||||    
T  9976016 ttctcataagattcttctcttctctg 9976041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 29 - 234
Target Start/End: Complemental strand, 22251600 - 22251388
Alignment:
Q  29 acaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac-------atgctaaactcaa 121  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||       |||||||||||||    
T  22251600 acaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa 22251501  T
Q  122 attcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagatt 221  Q
     ||||||||||||||||||||||||||||||| |||||  ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  22251500 tttcagaattatacaacttagaattagagaaaattagtttcacccttaccttaaattagatgatcagactctacaagattactcctcttctcacaagatt 22251401  T
Q  222 cttctcttctctg 234  Q
    |||||||||||||    
T  22251400 cttctcttctctg 22251388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 17307373 - 17307577
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||       |||    
T  17307373 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17307472  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |  || ||||||    
T  17307473 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcggtctctacgattttgctcctc 17307572  T
Q  209 ttctc 213  Q
    |||||    
T  17307573 ttctc 17307577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 2523912 - 2523687
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| || |||||||||||  ||||||| |||||       |||||||    
T  2523912 acatcaattctgcacaaattcaacgaattttctactctattaataaccaattacaatttaaaaacctaatttccaaattcccataaatacaacctacaac 2523813  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  2523812 atgttaaactcaatttaagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactttacaagattgctcctc 2523713  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||| ||||||| ||||    
T  2523712 ttctcacaagatttttctcttttctg 2523687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 24516073 - 24516238
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||       |||||||    
T  24516073 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 24516172  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24516173 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24516238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 40912207 - 40912372
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||       |||||||    
T  40912207 acatcatttctacacaaattcaacgaattttctactctattaacaaccaactacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40912306  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40912307 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 40912372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 19201365 - 19201187
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||       ||||    
T  19201365 acatcaattctacccaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcctataactacaacctacaac 19201266  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  19201265 atgataaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaacttaggttagatgatcg 19201187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 37270587 - 37270747
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||       |||||||    
T  37270587 acatcacttctac-caaattcaacggattttctactctattaacaacccattacaacttcaaaacttaattctcaaattctcataactacaacctacaac 37270685  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  37270686 atgctaaactcaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 37270747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 27484642 - 27484514
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||       ||||    
T  27484642 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 27484543  T
Q  109 atgctaaactcaaattcagaattatacaa 137  Q
    ||||||||||||| |||||||||||||||    
T  27484542 atgctaaactcaatttcagaattatacaa 27484514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 27852669 - 27852776
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    |||||||||||||||||| | |||||||| |||||||||||    
T  27852669 ttcagaattataccacttagaattagagaaagttagtcccacccttaccttagat----tgatcggactctacaagaatgctcctcttttcacaagattc 27852764  T
Q  223 ttctcttctctg 234  Q
    ||||||||||||    
T  27852765 ttctcttctctg 27852776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 21369294 - 21369405
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    ||||||||||||||||  |   |||||||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  21369294 ttcagaattatacaacccattgttagagaaagcttgtcccacccttaccttagattagatgatcggactctacaagattgctcatcttctcacaagattc 21369393  T
Q  223 ttctcttctctg 234  Q
    ||||||||||||    
T  21369394 ttctcttctctg 21369405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 14179758 - 14179669
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctct 233  Q
    |||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||    
T  14179758 attaaagaaggttagtcccacccttaccttatattagatgatcgaactctacaagattgctcctcttctcacaagattattctcttctct 14179669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 36841151 - 36841243
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac 108  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||||    
T  36841151 acatcaattctacacaaattcaacatattttctactctattaacaaccaattacaacttcaaaacctaatttctaaattcccataactacaac 36841243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 36841267 - 36841339
Alignment:
Q  162 cacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36841267 cacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 36841339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 22501973 - 22502050
Alignment:
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22501973 tcagaattaaattacttagaattagagaaagttagtcccacccttaccttagattagatgatcggactctacaagatt 22502050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 22509907 - 22509984
Alignment:
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22509907 tcagaattaaattacttagaattagagaaagttagtcccacccttaccttagattagatgatcggactctacaagatt 22509984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 31521197 - 31521281
Alignment:
Q  150 gaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    ||||||||| | |||||||||| || |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  31521197 gaaagttagcctcacccttaccctaaattagatgatcggactgtacaagattgctcctcttctcacaagattcttctcttctctg 31521281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 25142133 - 25142256
Alignment:
Q  59 caaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgc-------taaactcaaatt-cagaattatacaacttagaattagag 150  Q
    ||||||||||||||||| ||||||||||| ||||||| || ||||||||| | |       |||| |||| || ||||||||||| ||||||||||||||    
T  25142133 caaccaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagag 25142232  T
Q  151 aaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||||||||    
T  25142233 aaagttagtcccacccttacctta 25142256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 149549 - 149474
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    |||||||||||||| |  ||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||    
T  149549 agaattatacaactcattattagagaaagctagttccacccttaccttagattagatgatcggactctacaagatt 149474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 20916326 - 20916419
Alignment:
Q  141 agaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||||||  ||| |||||| |||||||||| ||| ||||||||||||  |||||||||||| |||||||||||| ||||||| |||||||||||    
T  20916326 agaattattgaaggttagttccacccttactttaaattagatgatcgagctctacaagattgctcctcttctcataagattcctctcttctctg 20916419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 357882 - 357933
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  357882 ttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 357933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 14183496 - 14183414
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttct 226  Q
    |||| |||| ||||||||||||||||||||| |||||||||||||| | || |||||| || | |||||||||||||||||||    
T  14183496 attaaagaaggttagtcccacccttaccttaaattagatgatcggattttataagattgcttcacttctcacaagattcttct 14183414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 24718041 - 24718127
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttc 230  Q
    |||| |||| |||||||||||||||||  ||| |||   ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  24718041 attaaagaatgttagtcccacccttactatatgttaatcgatcgaactctacaagattgctcctcttctcacaagattcttctcttc 24718127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 3539766 - 3539889
Alignment:
Q  59 caaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgc-------taaactcaaatt-cagaattatacaacttagaattagag 150  Q
    ||||||||||||||||| |||||||||||||||||||  | ||||||||| | |       |||| || | || ||||||||||| ||||| ||||||||    
T  3539766 caaccaattacaacttctaaacctaattctcaaattccaaaaactacaacctacaacttgttaaattcgattttcagaattataccacttaaaattagag 3539865  T
Q  151 aaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||||||||    
T  3539866 aaagttagtcccacccttacctta 3539889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 57 - 172
Target Start/End: Complemental strand, 1383667 - 1383545
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgc-------taaactcaaattcagaattatacaacttagaattaga 149  Q
    ||||||||||||||||||| ||||||||||| ||||||  || ||||||||| | |       ||||  ||  |||||||| ||||||||||||||||||    
T  1383667 aacaaccaattacaacttctaaacctaattcccaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatgatacaacttagaattaga 1383568  T
Q  150 gaaagttagtcccacccttacct 172  Q
    ||||||||||| |||||||||||    
T  1383567 gaaagttagtctcacccttacct 1383545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 25046120 - 25046170
Alignment:
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  25046120 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 25046170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 5986178 - 5986229
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  5986178 ttcagaattatacaacttagaattaaagaaggttcgtcccacccttacctta 5986229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 21081020 - 21080969
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  21081020 ttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 21080969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 12626477 - 12626399
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattaga-tgatcggactctacaagatt 201  Q
    |||||||||||||| ||||  ||||  ||| ||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  12626477 ttcagaattataca-cttatgattaatgaaggttagtcccacccttaccttacatttgaatgatcggactctacaagatt 12626399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 25184190 - 25184241
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  25184190 ttcagaattaaaatacttagaattagagaaagttagtctcacccttacctta 25184241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 24884399 - 24884449
Alignment:
Q  58 acaaccaattacaacttcaaaacctaattctcaaattctcataactacaac 108  Q
    |||||||||||||||||| ||||||||||| |||||| ||| |||||||||    
T  24884399 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaac 24884449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 23801518 - 23801559
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgat 185  Q
    ||||||||||| ||||||||||||||||||| ||||||||||    
T  23801518 attagagaaagctagtcccacccttaccttagattagatgat 23801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 18358018 - 18357975
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccaccc 166  Q
    |||||||||| |  ||||||||||||||||||||||||||||||    
T  18358018 ttcagaattaaaatacttagaattagagaaagttagtcccaccc 18357975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 21315527 - 21315476
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||  |  ||||||||||| |||||||||||||||||||    
T  21315527 ttcagaattatacaacccattattagagaaagctagtcccacccttacctta 21315476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 21335317 - 21335266
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||  |  ||||||||||| |||||||||||||||||||    
T  21335317 ttcagaattatacaacccattattagagaaagctagtcccacccttacctta 21335266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 21915625 - 21915672
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    |||||||||| |  |||||||||||||||||||||||| |||||||||    
T  21915625 ttcagaattaaaatacttagaattagagaaagttagtcacacccttac 21915672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 14694341 - 14694383
Alignment:
Q  137 acttagaattagagaaagttagtcccacccttaccttatatta 179  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||    
T  14694341 acttagaattatagaaagttagtctcacccttaccttagatta 14694383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 357809 - 357846
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattctcaaatt 94  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  357809 aacaaccaattacaacttctaaacctaattcccaaatt 357846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 44072572 - 44072609
Alignment:
Q  137 acttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  44072572 acttagaattagtgaaagttagtctcacccttacctta 44072609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 18390265 - 18390229
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagt 159  Q
    ||||||||||||  |||||||||||||||||||||||    
T  18390265 ttcagaattatatcacttagaattagagaaagttagt 18390229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 23610627 - 23610687
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatg 183  Q
    |||| |||||||||||  |  ||||||||||| |||||||||||||||||||  |||||||    
T  23610627 ttcataattatacaacccattattagagaaagctagtcccacccttaccttaggttagatg 23610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 4879 - 4654
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||       |||    
T  4879 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacgacctacaac 4780  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||    
T  4779 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtccgacccttaccttaaattagatgatcggactctacaagattgctcctc 4680  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  4679 ttctcacaagattcttctcttctctg 4654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 58633 - 58858
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||       |||    
T  58633 acatcaattctatacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 58732  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  58733 atgctaaactcaatttcagaattgtacaacttagaattagagaaagttagtcccacccttaccttaatttagatgatcggactctacaagattgctcctc 58832  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  58833 ttctcacaagattcttctcttctctg 58858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 172; Significance: 2e-92; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 17044853 - 17045078
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||       |||    
T  17044853 acatcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17044952  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  17044953 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattactcatc 17045052  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  17045053 ttctcacaagattcttctcttctctg 17045078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 17047013 - 17047238
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||  ||||||||       |||    
T  17047013 acatcaattctacacaaattcaacggattttttactctattaacaaccaattacaacttcaaaacttaattcccaaattcaaataactacaacctacaac 17047112  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17047113 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattactcctc 17047212  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  17047213 ttctcacaagattcttctcttctctg 17047238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 28 - 234
Target Start/End: Complemental strand, 22306736 - 22306523
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac-------atgctaaactca 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||       ||||||||||||    
T  22306736 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcacaaattcccataactacaacctacaacatgctaaactca 22306637  T
Q  121 aattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagat 220  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  22306636 atttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagat 22306537  T
Q  221 tcttctcttctctg 234  Q
    ||||||||||||||    
T  22306536 tcttctcttctctg 22306523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 17538993 - 17539217
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||||||           
T  17538993 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacatcttcaaaacctaatttccaaattcccataactacaacctacaac 17539092  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||| |||| |||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  17539093 atgataaaatcaatttcagaattatacaacttagaattagataaagttagtctcacccttaccttaaattagatgatcggattctacaagattactcctc 17539192  T
Q  209 ttctcacaagattcttctcttctct 233  Q
    |||||||||||||||||||||||||    
T  17539193 ttctcacaagattcttctcttctct 17539217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 11259318 - 11259537
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||       |||    
T  11259318 acatcacttctacacaaattcaacggattttctactttattaacaatcaattacaacttcaaaacctaattcccaaattctcataactacaatctacaac 11259417  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  11259418 atgctaaattcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagataatcggactctacaagattgctcctc 11259517  T
Q  209 ttctcacaagattcttctct 228  Q
    ||||| ||||||||||||||    
T  11259518 ttctcgcaagattcttctct 11259537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 7 - 210
Target Start/End: Original strand, 49900608 - 49900818
Alignment:
Q  7 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac- 105  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||     
T  49900608 atgatatgaacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 49900707  T
Q  106 ------aacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaaga 199  Q
          |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||| |||    
T  49900708 acctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaaattagtcccacccttaccttagattagatgatcggtctctacgaga 49900807  T
Q  200 ttactcctctt 210  Q
    |||||||||||    
T  49900808 ttactcctctt 49900818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 17693954 - 17694179
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||  |||||||||       |||    
T  17693954 acatcaattctacacaaattcaacggattttctactctattaacgatcaattacaacttcaaaatctaattcacaaatttccataactacaacctacaac 17694053  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| ||||||    
T  17694054 atgctaaactcaattttagaattatacaacttagaattagagaaagttagtctcacccttacattaaattagatgatcggactctacaagattgctcctc 17694153  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||| ||||||||||||||||||||    
T  17694154 ttctcgcaagattcttctcttctctg 17694179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 35354489 - 35354714
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaa-------c 108  Q
    |||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||  ||||||| |||||||||||       |    
T  35354489 acatcaattctacacaaattcaacggattttctactctaccaacaatcaattacaacttcaaaacctaatttccaaattcccataactacaaccaacaac 35354588  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||| ||||||    
T  35354589 atgctaaactcaatttcagaattatacaacttaaaattagagaaagttagtcccacacttagcttaaattagatgattggactctacaagattgctcctc 35354688  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    || |||||||||||||||||||||||    
T  35354689 ttatcacaagattcttctcttctctg 35354714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 41172534 - 41172311
Alignment:
Q  18 atcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac-------at 110  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||       ||    
T  41172534 atcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctaattccctaattcccataactacaacctacaacat 41172435  T
Q  111 gctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctctt 210  Q
    ||||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| ||||    
T  41172434 gctaaactcaatttcagagttatacaacttataagtagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgctcatctt 41172335  T
Q  211 ctcacaagattcttctcttctctg 234  Q
     |||||||||||||||||||||||    
T  41172334 gtcacaagattcttctcttctctg 41172311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 15931672 - 15931448
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||  |||||||||||| |||||||||||  |||||||||||||||||||           
T  15931672 acatcaattctacacaaattcaacgaattttctactctattaataattaattacaacttcgaaacctaattccaaaattctcataactacaacctaaaac 15931573  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||| ||||||||||||||||||||||||||||    
T  15931572 atgctaaactctatttcagaattataca-cttagaattagagaaagttagtctcacctttaccttaaattaaatgatcggactctacaagattactcctc 15931474  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  15931473 ttctcacaagattcttctcttctctg 15931448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 17519038 - 17518846
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||       ||||    
T  17519038 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17518939  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  17518938 attctaaagtcaatttcagaattatacaacttagaattagagaaagttagtcccacccttgccttagattagatgatcggactctagaagatt 17518846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 17533900 - 17533708
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||       ||||    
T  17533900 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17533801  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  17533800 attctaaagtcaatttcagaattatacaacttagaattagagaaagttagtcccacccttgccttagattagatgatcggactctagaagatt 17533708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 40812720 - 40812941
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||       |||||||    
T  40812720 acatcaattctacacaaattcaacggattttctactctattaacaatcaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40812819  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    |||||| ||||||||| |||  || ||    
T  40812820 atgctaaactcaatttcagaattatgcaacttagaattagagaaagttagtcccacccttaccttagat----tgatcgaactctacaaaattgttcatc 40812915  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    |||||||||||||||| |||||||||    
T  40812916 ttctcacaagattcttttcttctctg 40812941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 40807883 - 40808048
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||       |||||||    
T  40807883 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40807982  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807983 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 40808048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 14508749 - 14508959
Alignment:
Q  32 aattcaacggattttctactctattaacaaccaattacaacttc-aaaacctaattctcaaattctcataactac-------aacatgctaaactcaaat 123  Q
    |||||| | |||| |||||||| |  |||||||||||||||||| ||||||||||||  |||||| |||||||||       |||||||||| ||||| |    
T  14508749 aattcatcagattatctactctttctacaaccaattacaacttccaaaacctaattccaaaattcccataactacaacctacaacatgctaacctcaatt 14508848  T
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattct 223  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||| |    
T  14508849 tcagaattatacaacttagaattagagaaagttagtctcacccttaccataaattagatgatcggactctacaagattactcttcttctcacaagattat 14508948  T
Q  224 tctcttctctg 234  Q
    |||||||||||    
T  14508949 tctcttctctg 14508959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 44274305 - 44274470
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  |||||| ||||||| |||||       |||||||    
T  44274305 acatcaattctacacaaattcaatgaattttctactctattaacaaccaattacaacttcaaaatataattcccaaattcccataactacaacctacaac 44274404  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44274405 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 44274470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 10311415 - 10311575
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  10311415 acatcacttctac-caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 10311513  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    |||| ||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10311514 atgcaaaattcaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 10311575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 17541423 - 17541546
Alignment:
Q  111 gctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctctt 210  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  17541423 gctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgctcctctt 17541522  T
Q  211 ctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||    
T  17541523 ctcacaagattcttctcttctctg 17541546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 50348191 - 50348041
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||       ||||    
T  50348191 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 50348092  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagt 159  Q
    ||||||||||||| || | ||||||||||||||||||||||||||||||||    
T  50348091 atgctaaactcaattttaaaattatacaacttagaattagagaaagttagt 50348041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 10563596 - 10563760
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcat-------aactacaac 108  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||       |||||||||    
T  10563596 acatcaattctac-caaattcaacggcttttctactctattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaaactacaac 10563694  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  10563695 atgctaaactcaatttcataattatacaacttaaaattagagaaagttagtcccaccattacctta 10563760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 15566745 - 15566823
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| ||||||||    
T  15566745 ttcagaattatacaacttagaattagagaaagttagtcccacccttactttagattacatgatcggactcaacaagatt 15566823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 35064745 - 35064681
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaac 80  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35064745 acatcaattctacacaaattcaacggattttctactatattaacaaccaattacaacttcaaaac 35064681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 14152450 - 14152339
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    |||||||| |||||||| |  ||||||||||| |||||||||||||||||||  |||   ||||| ||| ||||||||| ||||||||||||||||||||    
T  14152450 ttcagaatgatacaactcattattagagaaagctagtcccacccttaccttaggttaatggatcgaactatacaagattgctcctcttctcacaagattc 14152351  T
Q  223 ttctcttctctg 234  Q
    ||||||||||||    
T  14152350 ttctcttctctg 14152339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 17325628 - 17325561
Alignment:
Q  167 ttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17325628 ttaccttaaattagatgattggactctacaagattactcctcttctcacaagattcttctcttctctg 17325561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 50350846 - 50350759
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttct 231  Q
    |||| |||| ||||||||||||||||||||| |||||||||||||||||||||| | |  ||||||||||||||||||||||||||||    
T  50350846 attaaagaaggttagtcccacccttaccttagattagatgatcggactctacaacactgttcctcttctcacaagattcttctcttct 50350759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 5200335 - 5200277
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaactt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5200335 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaactt 5200277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 9511076 - 9510916
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactaca-------acatgct 113  Q
    ||||||| || || ||||| ||||||||||| |   ||||||||||||||||||| ||||||||||||||||||| || |||||||       || || |    
T  9511076 aattctaaacgaaatcaacagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctaccacctgtt 9510977  T
Q  114 aaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||  ||  |||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  9510976 aaatccagtttcagaatcatacaacttagaattagagaaagttagtttcacccttacctta 9510916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 9519051 - 9518891
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactaca-------acatgct 113  Q
    ||||||| || || ||||| ||||||||||| |   ||||||||||||||||||| ||||||||||||||||||| || |||||||       || || |    
T  9519051 aattctaaacgaaatcaacagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctaccacctgtt 9518952  T
Q  114 aaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||  ||  |||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  9518951 aaatccagtttcagaatcatacaacttagaattagagaaagttagtttcacccttacctta 9518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 11563726 - 11563792
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcgga 189  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  11563726 ttcagaattataccacttagaattagagaaggttagtcccacccttaccttagattagatgatcgga 11563792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 16050875 - 16050979
Alignment:
Q  77 aaacctaattctcaaattctcataactacaacatgc-------taaactcaaattcagaattatacaacttagaattagagaaagttagtcccaccctta 169  Q
    ||||||||||||||||| |||| ||||||||||| |       ||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  16050875 aaacctaattctcaaatcctcaaaactacaacatacaacttgttaaacccaatttcagaatcatacaacttagaattagagaaagttagtcccaccctta 16050974  T
Q  170 cctta 174  Q
    |||||    
T  16050975 cctta 16050979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 19568368 - 19568208
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgc-------t 113  Q
    ||||||||||  |||||||||||| |||||| |   ||| ||||||||||||||| || |||||||| ||||||| || ||||||||| | |       |    
T  19568368 aattctacaccgattcaacggattctctactattacaactaccaattacaacttctaaccctaattcccaaattcccaaaactacaacctacaacctgtt 19568269  T
Q  114 aaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||   |  |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19568268 aaatctagtttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 19568208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 45530639 - 45530544
Alignment:
Q  137 acttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||||||||||   || |||||||||| | |||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  45530639 acttagaattattaaatgttagtcccatc-ttaccttaaattagatgatcggactctacaagattgctccttttctcacaagattctt-tcttctctg 45530544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 14641596 - 14641509
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctc 213  Q
    |||||||||||||  |  ||||||||||| || |||||||||||||||| ||||||||||||| |||||| ||||| |||||||||||    
T  14641596 agaattatacaacccattattagagaaagctaatcccacccttaccttagattagatgatcggtctctacgagattgctcctcttctc 14641509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 15446919 - 15446868
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15446919 ttcagaataatacaacttagaattagagaaagttagtcccacccttacctta 15446868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 35064658 - 35064566
Alignment:
Q  64 aattacaacttcaaaacctaattctcaaattctcataactacaac-------atgctaaactcaaattcagaattatacaacttagaattaga 149  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||       ||||||||||||| |||| ||||||||||||||||||||||    
T  35064658 aattacaacttcaaaacctaattcccaaatttccataactacaacctacaacatgctaaactcaatttcaaaattatacaacttagaattaga 35064566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 50347656 - 50347596
Alignment:
Q  153 agttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctc 213  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  50347656 agttagtctcacccttaccttaaattagatgatcggactctacaagattgctccttttctc 50347596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 24177787 - 24177736
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  24177787 ttcagaattatacaacttataattagagaaagtttgtcccacccttacctta 24177736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 33565088 - 33565139
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  33565088 ttcagaattataccacttagaattagagaaagttagtcacacccttacctta 33565139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 6159427 - 6159485
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatta 202  Q
    |||||||||||  |||| ||||||||||||| |||||||||||||||||||||||||||    
T  6159427 attagagaaagcgagtctcacccttaccttagattagatgatcggactctacaagatta 6159485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 5200284 - 5200243
Alignment:
Q  133 tacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5200284 tacaacttagaattagagaaagttagtcccacccttacctta 5200243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 53646089 - 53646032
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    |||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  53646089 attaaagaaggttagtcccacccttaccttagattagatgatcagactctacaagatt 53646032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 11885608 - 11885560
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacc 171  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||    
T  11885608 ttcagaattataacacttagaattagagaaagttagtcccacccttacc 11885560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 12509422 - 12509350
Alignment:
Q  102 ctacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||| ||||| ||||  ||| ||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  12509422 ctaccacatgttaaatccaatttcagaattatacaacttagaattaaagaaggtttgtcccacccttacctta 12509350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 36528851 - 36528919
Alignment:
Q  106 aacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||| ||||| |||  |||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  36528851 aacatgttaaacccaatctcagaattatattacttagaattagagaaagttaatcccacccttacctta 36528919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 35960979 - 35960928
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| || |||||||||||||||||| ||||||||||||||||    
T  35960979 ttcagaattataccacatagaattagagaaagttaatcccacccttacctta 35960928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 12917336 - 12917265
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    |||||||||||||||||||||||||| |||| ||| | |||  |||||||||||||| || |||||||||||    
T  12917336 attagagaaagttagtcccacccttatcttagattggttgaattcggactctacaagcttgctcctcttctc 12917265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 13185899 - 13185947
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  13185899 agaattatatcacttaaaattagagaaagttagtcccacccttacctta 13185947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 3527187 - 3527117
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttct 212  Q
    ||||||||||| ||||||||||||||||||| || || |||  |||||||||||||| || ||||||||||    
T  3527187 attagagaaagctagtcccacccttaccttagataagttgaattcggactctacaagtttgctcctcttct 3527117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 16979913 - 16979964
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||| ||||||||||||||||||||||||||    
T  16979913 ttcagaattaaaatacttagaattaaagaaagttagtcccacccttacctta 16979964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 17208525 - 17208576
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||| |  ||||||||||| |||||||||||||||||||    
T  17208525 ttcagaattatacaactcattattagagaaagctagtcccacccttacctta 17208576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 22652774 - 22652825
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  |||||||||||||||||||||||||||| |||||||||    
T  22652774 ttcagaattaaattacttagaattagagaaagttagtcccactcttacctta 22652825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 42324022 - 42323971
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||| ||||| | || |||||||||||||||||||||    
T  42324022 ttcagaattatacaacttaaaattaaataatgttagtcccacccttacctta 42323971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 29907640 - 29907702
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgat 185  Q
    ||||||||||||||||  |  |||| |||||| ||||||||||||||||||| ||||||||||    
T  29907640 ttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttagattagatgat 29907702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 29948806 - 29948868
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgat 185  Q
    ||||||||||||||||  |  |||| |||||| ||||||||||||||||||| ||||||||||    
T  29948806 ttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttagattagatgat 29948868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 29997960 - 29998022
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgat 185  Q
    ||||||||||||||||  |  |||| |||||| ||||||||||||||||||| ||||||||||    
T  29997960 ttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttagattagatgat 29998022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 49968981 - 49968859
Alignment:
Q  59 caaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaacatgctaaactcaa-attcagaattatacaacttagaattagag 150  Q
    ||||||||||||||||  ||||||||||| |||||||||| ||       ||||||| || |||| ||||  |||||||| |||| |||||||||||| |    
T  49968981 caaccaattacaacttataaacctaattcccaaattctcaaaactacaagctacaacctgttaaattcaattttcagaatcatac-acttagaattagtg 49968883  T
Q  151 aaagttagtcccacccttacctta 174  Q
    || ||||||||||| |||||||||    
T  49968882 aaggttagtcccactcttacctta 49968859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 174
Target Start/End: Complemental strand, 3264083 - 3263963
Alignment:
Q  51 tctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactcaaattcagaattatacaacttagaattagag 150  Q
    ||||||||||||| ||||||| |   || |||||||||||||||| ||  || | |||||| ||||| |||  ||| |||||||  ||||||||||||||    
T  3264083 tctattaacaacctattacaattctcaaccctaattctcaaattcaca--acaa-aacatgttaaacccaatctcataattatattacttagaattagag 3263987  T
Q  151 aaagttagtcccacccttacctta 174  Q
    || |||| ||| ||||||||||||    
T  3263986 aaggttaatccgacccttacctta 3263963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 5215648 - 5215703
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatatt 178  Q
    |||| |||||||||||| |  ||||||||||| |||| ||||||||||||||||||    
T  5215648 ttcataattatacaactcattattagagaaagctagtgccacccttaccttatatt 5215703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 34851454 - 34851388
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattctcaa 91  Q
    ||||||||||| | | |||||||| || ||||||||| |||||||| | ||||||||||||||||||    
T  34851454 tacacaaattctatgaattttctattcaattaacaactaattacaattctcaaaacctaattctcaa 34851388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 22841330 - 22841239
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    ||||||||||||||||  |  ||||||||||| ||||||||||||||| ||| ||| | |||  |||||||||| ||| || |||||||||||    
T  22841330 ttcagaattatacaacccattattagagaaagctagtcccacccttacattagattggttgaattcggactcta-aagcttgctcctcttctc 22841239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 14250153 - 14250085
Alignment:
Q  103 tacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacc 171  Q
    ||||||||| ||||  ||| || | ||||| |||||||||||||| |||| ||||||||||| ||||||    
T  14250153 tacaacatgttaaatccaatttgaaaattacacaacttagaattaaagaaggttagtcccactcttacc 14250085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 168; Significance: 4e-90; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 77574 - 77799
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||       |||    
T  77574 acatcaattatacacaaattcaacggattttctactctattaacaacctattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 77673  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  77674 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattagatgatcagactctacaagattactcctc 77773  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    |||||||||||||||||| |||||||    
T  77774 ttctcacaagattcttctgttctctg 77799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 31881 - 32106
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||           
T  31881 acatcacttctacacaaattcaacgaattttctgctctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataac 31980  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  31981 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaattagatgatcggactctacaagattgctcctc 32080  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  32081 ttctcacaagattcttctcttctctg 32106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 37188 - 37413
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||           
T  37188 acatcacttctacacaaattcaacgaattttctgctctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataac 37287  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  37288 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaattagatgatcggactctacaagattgctcctc 37387  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  37388 ttctcacaagattcttctcttctctg 37413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 633 - 408
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||           
T  633 acatcaattctacacaaattcaacttattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 534  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||  |||||    
T  533 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgttcctc 434  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    |||||||||||||||||| |||||||    
T  433 ttctcacaagattcttcttttctctg 408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 158; Significance: 3e-84; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 16 - 232
Target Start/End: Complemental strand, 42818072 - 42817849
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||| ||||||||||||           
T  42818072 acatcaattctacacaaattcaacggattttctactttattaacaaccaattacaacttcaaaatctaatttccaaattcccataactacaacctacaac 42817973  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  42817972 atgctaaactcaatttcagaattatacaacttagaattagagaaagtaagtcccacccttaccttaaattagatgatcggactctacaagattgctcttc 42817873  T
Q  209 ttctcacaagattcttctcttctc 232  Q
    ||||||||||||||||||||||||    
T  42817872 ttctcacaagattcttctcttctc 42817849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 19140659 - 19140870
Alignment:
Q  23 ttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacat-------gctaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |       |||||    
T  19140659 ttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacttgctaa 19140758  T
Q  116 actcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcac 215  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  19140759 actcaatttcagaattatacaacttagaattagagaaagt-agtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcac 19140857  T
Q  216 aagattcttctct 228  Q
    |||||||||||||    
T  19140858 aagattcttctct 19140870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 39936175 - 39935947
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||           
T  39936175 acatcaattgtacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcgcaaattcccataactacaacctacaac 39936076  T
Q  109 ---atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactc 205  Q
       ||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |  ||    
T  39936075 aacatgctaaactcaatttcataattatacaacttagaattagagaaagttaatcccacccttaccttaaattagatgatcggactctacaagactgttc 39935976  T
Q  206 ctcttctcacaagattcttctcttctctg 234  Q
     |||||||||| |||||||||||||||||    
T  39935975 ttcttctcacatgattcttctcttctctg 39935947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 20083812 - 20083638
Alignment:
Q  7 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-- 104  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  20083812 atgatatgaacatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactaca 20083713  T
Q  105 -----caacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
         ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20083712 acctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 20083638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 5761421 - 5761598
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||       |||||||    
T  5761421 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 5761520  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  5761521 atgctaaactcaatttcaaaattatac-acttagaattagagaaagttagtcccacccttaccttaggttagatgatcg 5761598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 5082377 - 5082222
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||       ||||    
T  5082377 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 5082278  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccac 164  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  5082277 atgctaaactcaatttcataattatacaacttagaattagagaaagttagtcccac 5082222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 6573221 - 6573060
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||       ||||    
T  6573221 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctcattcccaaattcccataactacaacctacaac 6573122  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||    
T  6573121 atgctaaactcaatttcaaaattatacaacttagaattagagaaagttagtctcacccttac 6573060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 37292593 - 37292753
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  37292593 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 37292691  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    |||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  37292692 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 37292753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 6202664 - 6202824
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  6202664 acatcacttctac-caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 6202762  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    |||| ||| |||| |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  6202763 atgcaaaattcaatttcagaattatacaacgtagaattagagaaagttagtctcacccttac 6202824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 6101918 - 6101753
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||       ||||    
T  6101918 acatcaatactacacaaattcaatagattttctactctattaacaaccaattataacttcaaaacctgattcccaaattcccataactacaacctacaac 6101819  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6101818 atgctaaacacaatttcagaattatacaacttagaattagagaaagttagtcccacctttacctta 6101753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 174
Target Start/End: Complemental strand, 20397656 - 20397510
Alignment:
Q  27 acacaaattcaacggattttctactctattaacaacc-aattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactcaaattc 125  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||| |||| || ||  || |||||||||||||||||| |||    
T  20397656 acacaaattcaatggattttctactctattaacaacctaattacaactttaaaacctaattcccaaaatcaca--acaacaacatgctaaactcaatttc 20397559  T
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20397558 agaattatacaacttagaattagagaaagttaatcccacccttacctta 20397510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 18761449 - 18761559
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  18761449 ttcagaattataccacttagaattagagaaagttagtcgcacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattc 18761548  T
Q  223 ttctcttctct 233  Q
    |||||||||||    
T  18761549 ttctcttctct 18761559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 20178704 - 20178602
Alignment:
Q  7 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaa-ttacaacttcaaaacctaattctcaaattctcataactac 105  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  20178704 atgatatgaacatcaattctacacaaattcaacgaattttctactctattaacaaccaatttacaacttcaaaacctaattcccaaattctcataactac 20178605  T
Q  106 aac 108  Q
    |||    
T  20178604 aac 20178602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 36306019 - 36306109
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36306019 attagagaaagctagtctcacccttaccttagattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 36306109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 23943866 - 23943766
Alignment:
Q  134 acaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctct 233  Q
    ||||||||||||||||||||| ||  ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||    
T  23943866 acaacttagaattagagaaagctatacccacccttaccttaaattagatgaccggactctacaagattgctcctcttctcacaaaattcttctcttctct 23943767  T
Q  234 g 234  Q
    |    
T  23943766 g 23943766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 21579236 - 21579146
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21579236 attaaagaaggttagtcacacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 21579146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 22258353 - 22258249
Alignment:
Q  127 gaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttct 226  Q
    ||||||||||||| |  ||||||||||| ||||| ||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  22258353 gaattatacaactcattattagagaaagctagtctcacccttaccttaaattagatgatcggacactacaagattgctcttcttctcacaagattcttct 22258254  T
Q  227 cttct 231  Q
    |||||    
T  22258253 cttct 22258249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 18834444 - 18834533
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctct 233  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| | |||||||||| | |||||||||||||||||||||| ||||||    
T  18834444 attagagaaagctagtcccacccttaccttaaattagatgatcgggcactacaagattgcccctcttctcacaagattcttcttttctct 18834533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 189
Target Start/End: Complemental strand, 20022155 - 20022025
Alignment:
Q  59 caaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactcaaatt-cagaattatacaacttagaattagagaaagtta 157  Q
    ||||||||||||||||| ||||||||||| ||||    || | ||||||| || |||| || | || ||||||||||| |||||||||||||||||||||    
T  20022155 caaccaattacaacttctaaacctaattcccaaaactaca-acctacaacttgttaaattcgattttcagaattataccacttagaattagagaaagtta 20022057  T
Q  158 gtcccacccttaccttatattagatgatcgga 189  Q
    ||||||||||||||||| ||||||||||||||    
T  20022056 gtcccacccttaccttagattagatgatcgga 20022025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 4380668 - 4380604
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  4380668 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaggttagatgatcg 4380604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 22208270 - 22208360
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctc 213  Q
    ||||||||||||||||  |  ||||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||||| |||||||||||    
T  22208270 ttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattagatgatcggtctctaccagattgctcctcttctc 22208360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 29762898 - 29762808
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||| |||| ||||||  ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||  |||||||||    
T  29762898 attaaagaaggttagtttcacccttaccttaaattagatgatcggactctacaagattgctcttcttctcacaagattctcttcttctctg 29762808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 12037184 - 12037125
Alignment:
Q  154 gttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctc 213  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  12037184 gttagtcccacccttaccttatattagatgatcggactctacgagattgctcctcttctc 12037125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 17906900 - 17906849
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17906900 ttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 17906849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 22532183 - 22532132
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22532183 ttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 22532132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 22536868 - 22536817
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22536868 ttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 22536817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 36727089 - 36727038
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  36727089 ttcagaattataccacttagaattagagaaagttagtctcacccttacctta 36727038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 45469270 - 45469219
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  45469270 ttcagaattataccacttagaattagagaaagttagtctcacccttacctta 45469219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 23419443 - 23419493
Alignment:
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  23419443 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 23419493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 19700165 - 19700213
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||    
T  19700165 agaattatacaacttagaattaaagaaggttagtcccacccttacctta 19700213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 22345186 - 22345257
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgat--cggactctacaagattactcctcttctc 213  Q
    ||||||||||| ||||||||||||||||||| ||||||||||  | ||||||||||| || |||||||||||    
T  22345186 attagagaaagctagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctc 22345257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 22356846 - 22356917
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgat--cggactctacaagattactcctcttctc 213  Q
    ||||||||||| ||||||||||||||||||| ||||||||||  | ||||||||||| || |||||||||||    
T  22356846 attagagaaagctagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctc 22356917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 22254767 - 22254818
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  22254767 ttcagaattataacacttagaattagagaaagttagtcccaccattacctta 22254818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 22583727 - 22583660
Alignment:
Q  107 acatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||| |||| |||| |||||||||||||||| |||||||| |||| |||| ||||||||||||||||    
T  22583727 acatgttaaattcaatttcagaattatacaacctagaattaaagaatgttaatcccacccttacctta 22583660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 23889784 - 23889851
Alignment:
Q  107 acatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||| |||| |||| |||||||||||||||| |||||||||||||||||| || |||||||| ||||    
T  23889784 acatgttaaattcaatttcagaattatacaacctagaattagagaaagttaatctcacccttagctta 23889851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 26454709 - 26454760
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  26454709 ttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 26454760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 174
Target Start/End: Complemental strand, 31722661 - 31722493
Alignment:
Q  13 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctac 105  Q
    ||||||| |||||||||  |||||||| ||||| |||||||   | ||||||||||||||||| ||||| ||||  ||||||| || ||       ||||    
T  31722661 tggacattaattctacatcaattcaacagattt-ctactcttaaatcaaccaattacaacttctaaaccaaatttccaaattcccaaaactacaacctac 31722563  T
Q  106 aacatgctaaactc-aaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||| || |||| || |  |||| |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  31722562 aacttgttaaattcgattttcaaaattataccacttagaattagagaaagttagtcccacccttatctta 31722493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 36305837 - 36305903
Alignment:
Q  104 acaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    |||||||||||||||||| |||| ||||||||||| || ||||| ||||||||| || |||||||||    
T  36305837 acaacatgctaaactcaatttcataattatacaacctaaaattaaagaaagttaatcacacccttac 36305903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 17159000 - 17158963
Alignment:
Q  137 acttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17159000 acttagaattagagaaagttagtcccacccttacctta 17158963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 23479097 - 23479134
Alignment:
Q  137 acttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23479097 acttagaattagagaaagttagtcccacccttacctta 23479134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 19880838 - 19880874
Alignment:
Q  138 cttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||||||||||||||||||||||||||    
T  19880838 cttagaattagagaaagttagtcccacccttacctta 19880874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 34758875 - 34758915
Alignment:
Q  130 ttatacaacttagaattagagaaagttagtcccacccttac 170  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  34758875 ttatacaacgtagaattagagaaagttagtcccacccttac 34758915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 17218703 - 17218754
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||| ||||    
T  17218703 ttcagaattataatacttagaactagagaaagttagtcccacccttatctta 17218754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 23884192 - 23884262
Alignment:
Q  145 ttagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    |||||||||| ||||||| ||||||||||| |||||||||  || ||||||||||| || |||||||||||    
T  23884192 ttagagaaagctagtcccgcccttaccttagattagatgaattcagactctacaagtttgctcctcttctc 23884262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 23948264 - 23948315
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| |||||||||||||||| |||| |||||| ||||||||||||||    
T  23948264 ttcagaatcatacaacttagaattaaagaaggttagtaccacccttacctta 23948315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 22610315 - 22610226
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    ||||| |||||||| |  ||||||||||||||||||||||||||||||| ||| | |||  |||||| ||||||| ||  ||||||||||    
T  22610315 agaatcatacaactcattattagagaaagttagtcccacccttaccttagattggttgaattcggaccctacaagcttgttcctcttctc 22610226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 23900037 - 23899987
Alignment:
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||| |||||  |||||||||||||||||||||||| |||||||||||||    
T  23900037 tcagagttatatcacttagaattagagaaagttagtcacacccttacctta 23899987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 21514695 - 21514756
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    |||||||||||||| |  ||||||||||  |||||||||||||||||||  |||||||||||    
T  21514695 agaattatacaactcattattagagaaatctagtcccacccttaccttaagttagatgatcg 21514756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 20879494 - 20879565
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    |||| |||| ||||||||||||||||||||| ||| | |||  |||||||||||||| || |||||||||||    
T  20879494 attaaagaaggttagtcccacccttaccttagattggttgaattcggactctacaagtttgctcctcttctc 20879565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 36732463 - 36732399
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    ||||||||||||||||  |  ||||||||||| ||||| |||||||||||||  |||||||||||    
T  36732463 ttcagaattatacaacccattattagagaaagctagtcacacccttaccttaggttagatgatcg 36732399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 12577885 - 12577931
Alignment:
Q  127 gaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |  |||||||||||||||||||||||||||||||    
T  12577885 gaattatacaact-attattagagaaagttagtcccacccttacctta 12577931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 18816346 - 18816291
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatatt 178  Q
    ||||||||||||||||  |   |||||||||| |||||||||||||||||||||||    
T  18816346 ttcagaattatacaacccatttttagagaaagctagtcccacccttaccttatatt 18816291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 22317961 - 22317911
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| ||||| ||||||||||| ||| |||||||||||||||||||||    
T  22317961 ttcagaatcataca-cttagaattagtgaaggttagtcccacccttacctta 22317911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 25657565 - 25657518
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    |||||||||| |  ||||||||||||||||||||| ||||||||||||    
T  25657565 ttcagaattaaaatacttagaattagagaaagttactcccacccttac 25657518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 16198851 - 16198888
Alignment:
Q  137 acttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  16198851 acttagaattagagaaagttagtcccacttttacctta 16198888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 11439 - 11215
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac------- 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||           
T  11439 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 11340  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| ||     
T  11339 atgctaaactcaatttcagaaatatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcggactctacaacattact-ctt 11241  T
Q  209 ttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||    
T  11240 ttctcacaagattcttctcttctctg 11215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 1092 - 1316
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||   ||||||||       |||    
T  1092 acatcaattctacacaaattcaacggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattacaataactacaacctacaac 1191  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || |||    
T  1192 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggattctacaaaattgctactc 1291  T
Q  209 ttctcacaagattcttctcttctct 233  Q
    |||||||||||||||||||||||||    
T  1292 ttctcacaagattcttctcttctct 1316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 151; Significance: 5e-80; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 34226 - 34450
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||       |||    
T  34226 acatcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctgattcccaaattcccataactacaacctacaac 34325  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| || |||    
T  34326 atgctaaactcaatttcagaattaaacaaattagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaaaattgctactc 34425  T
Q  209 ttctcacaagattcttctcttctct 233  Q
    |||||||||||||||||||||||||    
T  34426 ttctcacaagattcttctcttctct 34450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 5930 - 6002
Alignment:
Q  102 ctacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |||| |||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  5930 ctacaacatgttaaattcaatttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 6002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 147; Significance: 1e-77; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 21958 - 21738
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||       |||||||    
T  21958 acatcaattctacacaaattcaacttattttttactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataaatacaacctacaac 21859  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctc 208  Q
    |||||||| |||| ||||||| ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||| ||||||    
T  21858 atgctaaattcaatttcagaactatacaacttagaattagagaaatttagtcccaccattaccttaaattagatgatcggactctacaagattgctcctc 21759  T
Q  209 ttctcacaagattcttctctt 229  Q
    |||||||||||||||||||||    
T  21758 ttctcacaagattcttctctt 21738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 58880 - 58827
Alignment:
Q  181 atgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  58880 atgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 58827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 20 - 234
Target Start/End: Original strand, 78955 - 79161
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactc 119  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||    
T  78955 caattctacacaaattcaatggattttctactttattaacaaccaattacaacttcaaaacctaattccca--------taactacaacatgctaaactc 79046  T
Q  120 aaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaaga 219  Q
    || |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||| |    
T  79047 aatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcgaactctacaagattgctcctcttctcacaaaa 79146  T
Q  220 ttcttctcttctctg 234  Q
    ||||| |||||||||    
T  79147 ttcttatcttctctg 79161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 21300209 - 21300017
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||       |||    
T  21300209 acatcaattctacacaaatttaacagattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactactacctacaac 21300110  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    |||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  21300109 atgctaaacttaatttcagaattatacaacttaaaattagagaaagttagtcccacccttaccttagattagatgatcagactctacaagatt 21300017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 7484903 - 7485050
Alignment:
Q  30 caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaacatgctaaactcaaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||     
T  7484903 caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgctaaactcaat 7485002  T
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  7485003 ttcagaattatacaacgtagaattagagaaagttagtcccacccttac 7485050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 210
Target Start/End: Original strand, 19921525 - 19921732
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||| ||||||  |||||       |||||||    
T  19921525 acatcaattctacacaaattcaacagattttctactctattaacaactaattataacttcaaaacctaattcccaaatttccataattacaacctacaac 19921624  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttag------tcccacccttaccttatattagatgatcggactctacaagatta 202  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||| |||      |||||||||||||||| ||||||||||||| |||||| |||||     
T  19921625 atgttaaactcaatttcagaattatacaacttagaattagagaaaggtagtcccactcccacccttaccttagattagatgatcggtctctacgagattg 19921724  T
Q  203 ctcctctt 210  Q
    ||| ||||    
T  19921725 ctcatctt 19921732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 31622028 - 31622178
Alignment:
Q  32 aattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactcaaattcagaatt 131  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  || ||| |||||||||||||||||| |||||||||    
T  31622028 aattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaatttaca-aacaacaacatgctaaactcaatttcagaatt 31622126  T
Q  132 atacaacttagaattagagaaagttagtcccacccttaccttatattagatg 183  Q
    ||||||| || ||||||||||||||| |||||||||||||||| ||||||||    
T  31622127 atacaacctaaaattagagaaagttaatcccacccttaccttagattagatg 31622178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 20566445 - 20566598
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactc 119  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || |    || | ||||||||||||||||||    
T  20566445 caattctacacaaattctacggattttctattctattaacaaccaattacaacttcaaaacctaattcccataactaca-acctacaacatgctaaactc 20566543  T
Q  120 aaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    || |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  20566544 aatttcagaattatacaactttgaattagagaaagttagtctcacccttacctta 20566598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 23199258 - 23199148
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    ||||||||||||||||  |  ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  23199258 ttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgatcggactctacaagattgctcttcttctcacaagattc 23199159  T
Q  223 ttctcttctct 233  Q
    |||||||||||    
T  23199158 ttctcttctct 23199148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 21398674 - 21398584
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21398674 attagagaaagctaatcccacccttaccttagattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 21398584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 6551341 - 6551290
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6551341 ttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 6551290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 26762424 - 26762514
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||| |||| |||||||||||||||||||||  |||   ||||| ||||||||||||| || ||||||||||||||||||| |||||||||    
T  26762424 attaaagaaggttagtcccacccttaccttaggttaatcgatcgaactctacaagattgcttctcttctcacaagattcttttcttctctg 26762514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 22111762 - 22111876
Alignment:
Q  63 caattacaacttcaaaacctaattctcaaattctcata-------actacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagt 155  Q
    ||||||| |||| |||||||||||||||||||| || |       || |||||||||||||||||| |||| |||||||||||  | |||||||||||||    
T  22111762 caattacgacttgaaaacctaattctcaaattcgcaaattcacaaacaacaacatgctaaactcaatttcaaaattatacaaccaaaaattagagaaagt 22111861  T
Q  156 tagtcccacccttac 170  Q
    || ||||||||||||    
T  22111862 taatcccacccttac 22111876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 36508684 - 36508628
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatatta 179  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  36508684 ttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttaaatta 36508628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 32607346 - 32607280
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctctt 210  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||| |||||| ||||| ||||||||    
T  32607346 attagagaaagctagtcccacccttaccttagattagataatcggtctctacgagattgctcctctt 32607280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 8503913 - 8503849
Alignment:
Q  149 agaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctc 213  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||| ||||| ||||| |||||    
T  8503913 agaaggttagtcccacccttaccttatattagataatcggtctctacgagattgctcctattctc 8503849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 30616615 - 30616663
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacc 171  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||    
T  30616615 ttcagaatcatacaacttagaattagagaaagtcagtcccacccttacc 30616663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 266039 - 266090
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  266039 ttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 266090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 17011729 - 17011780
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  17011729 ttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 17011780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 20469227 - 20469176
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  20469227 ttcagagttatatcacttagaattagagaaagttagtcccacccttacctta 20469176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 21617965 - 21617928
Alignment:
Q  137 acttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21617965 acttagaattagagaaagttagtcccacccttacctta 21617928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 10954069 - 10954141
Alignment:
Q  102 ctacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| ||||  ||| |||| ||||| ||||||||||||||  ||| |||||||||||||||||||||    
T  10954069 ctacaacatgttaaatccaatttcataattacacaacttagaattaaggaaggttagtcccacccttacctta 10954141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 18744875 - 18744926
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||  |  |||||||||||||||||||||||||||||||    
T  18744875 ttcagaattatacaacccattattagagaaagttagtcccacccttacctta 18744926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 31456961 - 31457012
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| |||| ||||| |||||||||||||||||| |||||||||||||    
T  31456961 ttcagaatcataccacttaaaattagagaaagttagtctcacccttacctta 31457012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 17876132 - 17876182
Alignment:
Q  58 acaaccaattacaacttcaaaacctaattctcaaattctcataactacaac 108  Q
    |||||||||||||||||| ||||||||||| |||||| ||| |||||||||    
T  17876132 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaac 17876182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 22111715 - 22111764
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaa 77  Q
    ||||||||||  ||||||||| |||||||||||||||||||| |||||||    
T  22111715 cacaaattcattggattttctgctctattaacaaccaattacgacttcaa 22111764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 10774714 - 10774664
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| ||||| ||||||||||| ||| |||||||||||||||||||||    
T  10774714 ttcagaatcataca-cttagaattagtgaaggttagtcccacccttacctta 10774664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 14025837 - 14025794
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||    
T  14025837 attaaagaaggttagtcccacccttaccttagattagatgatcg 14025794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 25249879 - 25249828
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||| |||||| ||||| |||| |||||||| ||||||||||||    
T  25249879 ttcagaattatataacttaaaattaaagaaggttagtcctacccttacctta 25249828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 25313663 - 25313612
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||| |||||| ||||| |||| |||||||| ||||||||||||    
T  25313663 ttcagaattatataacttaaaattaaagaaggttagtcctacccttacctta 25313612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 16063755 - 16063844
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    |||||||||||||  |  ||||||||||| ||||||||||||||||||| ||| | |||   | ||||||||||| || |||||||||||    
T  16063755 agaattatacaacccattattagagaaaggtagtcccacccttaccttagattggttgaatacagactctacaagcttgctcctcttctc 16063844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 1627115 - 1627071
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    |||||||||||||| |  ||||||||||| |||||||||||||||    
T  1627115 agaattatacaactcattattagagaaagctagtcccacccttac 1627071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 21504161 - 21504232
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    |||| |||| |||||||||||| |||||||| ||| | |||  |||||||||||||| || |||||||||||    
T  21504161 attaaagaaggttagtcccacctttaccttagattggttgaattcggactctacaagcttgctcctcttctc 21504232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 134; Significance: 7e-70; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 21 - 201
Target Start/End: Complemental strand, 12693 - 12506
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac-------atgct 113  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||       |||||    
T  12693 aattctatacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataacatgct 12594  T
Q  114 aaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  12593 aaactcaatttcagaattatacaacttagaattagagaaagttattcccacccttaccttggattagatgatcggactctacaagatt 12506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 5270 - 5432
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||       |||||||    
T  5270 acatcaattctacacaaattcaaaggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaattcccataactacaacctacaac 5369  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacc 171  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5370 atgctaaacttaatttcagaattatacaacttagaattagagaaagttagtcccacccttacc 5432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 25 - 190
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||       |||||||    
T  25 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 124  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  125 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 24203 - 24071
Alignment:
Q  102 ctacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24203 ctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 24104  T
Q  202 actcctcttctcacaagattcttctcttctctg 234  Q
     ||||||||||||||||||||||||||||||||    
T  24103 gctcctcttctcacaagattcttctcttctctg 24071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 405 - 570
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||       |||||||    
T  405 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaac 504  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  505 atgctaaactcaatttcagaatgatacaacttagaattagagaaagttagtctcacccttacctta 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 861 - 696
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||       ||||    
T  861 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 762  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  761 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccctacctta 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 3069 - 3234
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||       |||||||    
T  3069 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 3168  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    || ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3169 atactaaagtcaatttcagaattatacaacttagaattagagaaagttagtccaacccttacctta 3234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 2451 - 2543
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  2451 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaac 2543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 13557 - 13392
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| || ||       |||||||    
T  13557 acatcaattctacacaaattcaacggattttctactctattaacaaccaattataacttcaaaacctaattcccaaattcccaaaactacaacctacaac 13458  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13457 atgctaaactcaatttcagaattatacaacttggaattagagaaagttagtcccacccttacctta 13392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 116; Significance: 4e-59; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 169164 - 168999
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||       ||||    
T  169164 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaagttcaaaacctaattcccaaattcccataactacaacctacaac 169065  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  169064 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccctacctta 168999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 143498 - 143663
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||   ||||       |||||||    
T  143498 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacataattcccaaattaaaataactacaacctacaac 143597  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  143598 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 143663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 174243 - 174333
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||| |||| ||||||||||||||||| |||  |||   ||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  174243 attaaagaaggttagtcccacccttactttaggttaatcgatcgaactctacaagattgctcctcttctcacaagattcttctcttctctg 174333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 78298 - 78125
Alignment:
Q  68 acaacttcaaaacctaattctcaaattctcataactacaac-------atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtc 160  Q
    |||||||||||||||||||  ||||||| ||||||||||||       ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  78298 acaacttcaaaacctaatttccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtc 78199  T
Q  161 ccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  78198 ccacccttaccttaaattagatgatcgtactctacaagattgctcctcttctcacaagattattctcttatctg 78125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 146610 - 146775
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaac 108  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| |||||       |||||||    
T  146610 acatcaattctacacaaattcaacggatttcctactctattaacaaccaattataacttcaaaacctaattcccaaattcccataactacaacctacaac 146709  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  146710 atgctaaactcaatttcagaattatacaacttagaattagagtaagttagtcccacccatacctta 146775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 112; Significance: 1e-56; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 328455 - 328275
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataacta-------caac 108  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||  ||||||||       ||||    
T  328455 acatcaattctacacaaattcaactgattttctactctattaacaaccaattacaacttcgaaacctaattcccaaatttccataactacaatcttcaac 328356  T
Q  109 atgctaaactcaaattcagaattatacaactt--agaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||  |||||||||||    
T  328355 atgctaaactcaatttcagaattatacaacttagagaattagagaaagttagtcccacccttaccttaggttagatgatcg 328275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 72841 - 72980
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactcaaattc 125  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| | |||| ||||||| |||||||||| ||     
T  72841 tacacaaattcaatggattttctattctattaacaaccaattacaacttcaaaacctaattcacaaattcac-taacaacaacatactaaactcaatttt 72939  T
Q  126 agaattatacaacttagaattagagaaagttagtcccaccc 166  Q
    ||||||||||||| ||  ||| |||||||||| ||||||||    
T  72940 agaattatacaacctaagattggagaaagttaatcccaccc 72980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 75691 - 75834
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaa--cctaattctcaaattctcataactacaacatgctaaactcaaattc 125  Q
    ||||||||||| |||||||||| |||||||||||||||||||||   | ||   || ||||| ||||||  || ||| ||||||||||| |||||| |||    
T  75691 cacaaattcaatggattttctattctattaacaaccaattacaaaacctaattcccaaattcacaaatttaca-aacaacaacatgctacactcaatttc 75789  T
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    ||||||||||||| ||  |||||||||||||| ||||||||||||    
T  75790 agaattatacaacctaagattagagaaagttaatcccacccttac 75834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 73091 - 73180
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatg--atcggactctacaagattactcctcttctc 213  Q
    ||||| |||||||| |  ||||||||||||||||||||||||||||||| ||||||||   || ||||||||||| || |||||||||||    
T  73091 agaatcatacaactcattattagagaaagttagtcccacccttaccttacattagatggtttcagactctacaagcttgctcctcttctc 73180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 110175 - 110222
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||||    
T  110175 ttcagaattatatcacttagaattagagaaagttagtctcacccttac 110222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 75963 - 76030
Alignment:
Q  148 gagaaagttagtcccacccttaccttatattagatg--atcggactctacaagattactcctcttctc 213  Q
    ||||||| ||||||||||||||||||| ||||||||   || ||||||||||| ||||| ||||||||    
T  75963 gagaaagctagtcccacccttaccttagattagatggtttcagactctacaagcttacttctcttctc 76030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 2535 - 2666
Alignment:
Q  102 ctacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||| |||||    
T  2535 ctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccgtagattagatgatcggtctctacgagatt 2634  T
Q  202 actcctcttctcacaagattcttctcttctct 233  Q
     |||||||||||||||||||||||||||||||    
T  2635 gctcctcttctcacaagattcttctcttctct 2666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 1052 - 1217
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactac-------aac 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||       |||    
T  1052 acatcaattctacacaaattcaacggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctaaaac 1151  T
Q  109 atgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| |||| ||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  1152 atgctaaattcaatttcagaattatacaacttagaattaggaaaagttagtcacacccttacctta 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 19652 - 19805
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactc 119  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||   ||||||| ||||||||||    
T  19652 caattctacacaaattcaatggattttctactctattaacaaccaattacaacttaaaaacctaattcccaaattcaca-gcctacaacttgctaaactc 19750  T
Q  120 aaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    || || |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  19751 aatttgagaattatacaacttagaattagagaaagtcagtctcacccttacctta 19805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 19208 - 19316
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  19208 ttcagaattatacaacttagaattagagaaagttagtcccacccttacgttagattagatcatcggactctacaagattgctcctcttctcacaagattc 19307  T
Q  223 ttctcttct 231  Q
    |||||||||    
T  19308 ttctcttct 19316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 2787 - 2941
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaatt-acaacttcaaaacctaattctcaaattctcataactacaacatgctaaact 118  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||| || | ||||||||||||||| ||||||| || ||| |||||||||||||||    
T  2787 caattatacacaaattcaaaggattttctattctattaacaaccaatttactaattcaaaacctaattcacaaattcaca-aacaacaacatgctaaact 2885  T
Q  119 caaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||| |||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  2886 caatttcagaattatacaacctaaaattagagaaagttaatcccacccttacctta 2941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 42 - 174
Target Start/End: Complemental strand, 29711 - 29573
Alignment:
Q  42 attttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac-------atgctaaactcaaattcagaattata 134  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||       ||||||||||||| ||||||||||||    
T  29711 attttctac-ctatttacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacgacatgctaaactcaatttcagaattata 29613  T
Q  135 caacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  29612 caacttagaattatagaaagttagtcccacccttacctta 29573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 21616 - 21663
Alignment:
Q  127 gaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||    
T  21616 gaatcatacaacttagaattagagaaagctagtcccacccttacctta 21663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 81; Significance: 3e-38; HSPs: 6)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 5167 - 5310
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactcaaattc 125  Q
    |||| ||| |||| |||||||||| |||||||||||||||||||||||||||||| |||||| ||||||| || ||| ||||||||| |||||||| |||    
T  5167 tacaaaaagtcaatggattttctattctattaacaaccaattacaacttcaaaacgtaattcccaaattcaca-aacaacaacatgcaaaactcaatttc 5265  T
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    ||||||||||||| ||  |||||||||||||| ||||||||||||    
T  5266 agaattatacaacctaagattagagaaagttaatcccacccttac 5310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 11287 - 11430
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactcaaattc 125  Q
    |||| ||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || ||| ||||||||| |||||||| |||    
T  11287 tacaaaaagtcaatggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattcaca-aacaacaacatgcaaaactcaatttc 11385  T
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    ||||| ||||||| ||  |||||||||||||| ||||||||||||    
T  11386 agaatgatacaacctaagattagagaaagttaatcccacccttac 11430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 19605 - 19754
Alignment:
Q  27 acacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctca-------taactacaacatgctaaactc 119  Q
    |||||||||||| |||||||||| | ||||||||| |||||||||||||| |||||||||||||||||| ||        ||| ||||||||||||||||    
T  19605 acacaaattcaatggattttctatt-tattaacaatcaattacaacttcataacctaattctcaaattcacaaattcacaaacaacaacatgctaaactc 19703  T
Q  120 aaattcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    || |||||||||||| ||| ||  |||||||||| ||| |||||| |||||    
T  19704 aatttcagaattatataacctaagattagagaaatttaatcccacacttac 19754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 5455 - 5545
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctc 213  Q
    ||||||||||||||||| |  ||||||||||| ||||||||||||||||||| |||||||||| || |||||| ||||| |||||||||||    
T  5455 ttcagaattatacaactcattattagagaaaggtagtcccacccttaccttagattagatgattggtctctacgagattgctcctcttctc 5545  T

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Target: scaffold0174; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 11617 - 11707
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctc 213  Q
    ||||||||||||||||  |   ||||||||| ||||||||||||||| |||| ||||||||||||| |||| | ||||| |||||||||||    
T  11617 ttcagaattatacaacccatttttagagaaatttagtcccacccttatcttacattagatgatcggtctctgcgagattgctcctcttctc 11707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 19878 - 19947
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctc 213  Q
    ||||||||||  |||||| |||||||||||| |||||||||||||  ||||| ||||| |||||||||||    
T  19878 attagagaaatctagtcctacccttaccttagattagatgatcggtttctacgagattgctcctcttctc 19947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 35418 - 35542
Alignment:
Q  55 ttaacaaccaattacaacttcaaaacctaattctcaaattctcataa-----ctacaacatgctaaactcaaattcagaattatacaacttagaattaga 149  Q
    ||||||||||||||| ||||||||||||||||| ||||||| || ||     |||||||||||||||||||| |||||||||||||||||||||||||||    
T  35418 ttaacaaccaattacgacttcaaaacctaattcccaaattcccaaaactaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 35517  T
Q  150 gaaagttagtcccacccttacctta 174  Q
    ||||||||||| |||||||||||||    
T  35518 gaaagttagtctcacccttacctta 35542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 5634 - 5745
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    ||||||||||||||||  |  ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  5634 ttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgatcggactctacaagattgctcttcttctcacaagattc 5733  T
Q  223 ttctcttctctg 234  Q
    ||||||||||||    
T  5734 ttctcttctctg 5745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 26779 - 26638
Alignment:
Q  30 caaattcaacggattttctactctattaacaaccaa-ttacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactcaaatt-cag 127  Q
    ||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||| ||||||| || ||| |||||||||||||||||| || |||    
T  26779 caaattcaatggattttctactctattaacaaccaaattactaattcaaaacctaattcccaaattcaca-aacaacaacatgctaaactcaattttcag 26681  T
Q  128 aattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    ||||||||||| || ||||| ||||||||| ||||||||||||    
T  26680 aattatacaacctaaaattaaagaaagttaatcccacccttac 26638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 13572 - 13493
Alignment:
Q  154 gttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctct 233  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13572 gttagtcccacccttaccttaaattagatgatcggactctacaagattaatcctcttctcacaagattcttctcttctct 13493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 170
Target Start/End: Original strand, 10741 - 10846
Alignment:
Q  64 aattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtccca 163  Q
    |||||||||||||||||||||||| ||||||| || ||| |||||||||||||||||| |||||||||||||||| || ||||||||||||||| |||||    
T  10741 aattacaacttcaaaacctaattcccaaattcaca-aacaacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagttaatccca 10839  T
Q  164 cccttac 170  Q
    |||||||    
T  10840 cccttac 10846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 10969 - 11059
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    ||||||||||| |||| |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||    
T  10969 attagagaaagctagttccacccttaccttatattagatgatcagattctacaagattgctcctcttctcacaagattcttctcttctctg 11059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 17991 - 17913
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  17991 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcggattctacaagatt 17913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 23922 - 23832
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    ||||||||||| ||||| ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23922 attagagaaagctagtctcacccttaccttgaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 23832  T

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Target: scaffold0032 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 61899 - 61821
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  61899 ttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattagatgatcggattctacaagatt 61821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 2505 - 2396
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattc 222  Q
    ||||||||||||||||  |  ||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||||| || |||||||||||||||||    
T  2505 ttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgttcggactttacaagattgct-ctcttctcacaagattc 2407  T
Q  223 ttctcttctct 233  Q
     ||||||||||    
T  2406 ctctcttctct 2396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 28583 - 28662
Alignment:
Q  154 gttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctct 233  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||| || ||||||||    
T  28583 gttagtcccactcttaccttagattagatgataggactctacaagattgctcctcttctcacaagattattttcttctct 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 11190 - 11100
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    ||||||||||| |||||||| |||||||||| ||||| ||||||||| ||| |||||| || ||||||||| |||||||||||||||||||    
T  11190 attagagaaagctagtcccatccttaccttaaattaggtgatcggacactaaaagattgcttctcttctcagaagattcttctcttctctg 11100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 10913 - 10755
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctca---taa--ctacaacatgctaa 115  Q
    |||||||||| |||||||  |||| |||||| |   ||||||||||||||||||| || |||||||| ||||||| ||   |||  ||||||| || |||    
T  10913 aattctacaccaattcaatagattctctactattacaacaaccaattacaacttctaaccctaattcccaaattcccaaactaaacctacaacctgttaa 10814  T
Q  116 actcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |  ||  |||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  10813 atccagtttcacaatcatacaacttagaattagagaaagttagtcccacccttacctta 10755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 174
Target Start/End: Complemental strand, 5156 - 5045
Alignment:
Q  60 aaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagt 159  Q
    |||||||||||||||| || |||||||| |||| |   | | ||||||| || ||||  ||  |||| ||| ||||||||||||||||||||||||||||    
T  5156 aaccaattacaacttctaaccctaattcccaaact---aaacctacaacttgttaaatccagtttcacaatcatacaacttagaattagagaaagttagt 5060  T
Q  160 cccacccttacctta 174  Q
    |||||||||||||||    
T  5059 cccacccttacctta 5045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 1938 - 1989
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||| |||||||||||||||||| |||||    
T  1938 ttcagaattaaaatacttagaattagataaagttagtcccaccctttcctta 1989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 2251 - 2187
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  2251 ttcagaattatacaacttagaattagagaaaattagtcccacccttaccttaggttagatgatcg 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 234
Target Start/End: Complemental strand, 2169 - 2141
Alignment:
Q  206 ctcttctcacaagattcttctcttctctg 234  Q
    |||||||||||||||||||||||||||||    
T  2169 ctcttctcacaagattcttctcttctctg 2141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 1109 - 1043
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcgga 189  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  1109 ttcagaattataacacttagaataagagaaagttagtcccacccttaccttagattagatgatcgga 1043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 10476 - 10386
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||| |||| |||||||||||||||||||||  |||   ||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  10476 attaaagaaggttagtcccacccttaccttaggttaatcgatcgaactctacaagattgctcctcttctcacaagattattctcttctctg 10386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 3901 - 3986
Alignment:
Q  149 agaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||| ||| ||| |||||||||||||  |||   ||||| |||||| |||||| ||| ||||||||||||||||||||||||||||    
T  3901 agaaggttggtcacacccttaccttaggttaatcgatcgaactctataagattgctcatcttctcacaagattcttctcttctctg 3986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 5353 - 5292
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||    
T  5353 agaattatacaacttaaaattagagaaagttagtcccacccttaccttaggttagatgatcg 5292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 234
Target Start/End: Complemental strand, 5177 - 5149
Alignment:
Q  206 ctcttctcacaagattcttctcttctctg 234  Q
    |||||||||||||||||||||||||||||    
T  5177 ctcttctcacaagattcttctcttctctg 5149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 234
Target Start/End: Complemental strand, 5274 - 5246
Alignment:
Q  206 ctcttctcacaagattcttctcttctctg 234  Q
    |||||||||||||||||||||||||||||    
T  5274 ctcttctcacaagattcttctcttctctg 5246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 18670 - 18613
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  18670 attagagaaagctagtcccacccttaccttagattagatgatcggactctacaagatt 18613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 1957 - 2050
Alignment:
Q  141 agaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    |||||||  ||| |||||||||||||||||||||   ||   ||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  1957 agaattattgaaggttagtcccacccttaccttagcataatcgatcgaactctacaagattgctcctcttctcacaagattcttctcttctctg 2050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 113127 - 112966
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataa-------ctacaacatgct 113  Q
    |||||||||| ||||||||  |||||||||| | | ||||||||||||||||||| ||||||||||| ||||||| || ||       ||||||| || |    
T  113127 aattctacaccaattcaacaaattttctactgt-taaacaaccaattacaacttctaaacctaattcccaaattcccaaaattacaacctacaacttgtt 113029  T
Q  114 aaactcaa--attcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||| ||||   |||||| |||||  ||||||||||||||||||||||||||||||||| ||||    
T  113028 aaattcaatttttcagagttatatcacttagaattagagaaagttagtcccacccttatctta 112966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 117960 - 117807
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacatgctaaactca 120  Q
    |||||||| | |||||||  ||||||||||| | | ||||||||||||||||||| ||||||||||| |||| |  || | || |||| || |||| |||    
T  117960 aattctacgccaattcaatagattttctactgt-taaacaaccaattacaacttctaaacctaattcccaaaattaca-atcttcaacttgttaaattca 117863  T
Q  121 aatt--cagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    | ||  |||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  117862 atttttcagagttatatcacttagaattagagaaagttagtcccacccttacctta 117807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 81501 - 81546
Alignment:
Q  63 caattacaacttcaaaacctaattctcaaattctcataactacaac 108  Q
    ||||||||||||| ||||||||||| ||||||| || |||||||||    
T  81501 caattacaacttctaaacctaattcccaaattcccaaaactacaac 81546  T

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Target: scaffold0802 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 4760 - 4709
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4760 ttcagaattatactacttagaattagagaaagttagtcccacccttacctta 4709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 6736 - 6681
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatatt 178  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  6736 ttcagaatcatacaacttagaattagagaaagttagtcccacccttaccatatatt 6681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 15273 - 15324
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15273 ttcagaataatacaacttagaattagagaaagttagtcccacccttacctta 15324  T

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Target: scaffold0676 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 2882 - 2960
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcggactctacaagatt 201  Q
    ||||||||||||||||  |  ||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||    
T  2882 ttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattaaatgatcagactctacaagatt 2960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 1917 - 1855
Alignment:
Q  104 acaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccaccc 166  Q
    |||||||| |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  1917 acaacatgttaaattcaatttcagaattataccacttagaattagagaaagttagtcccaccc 1855  T

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Target: scaffold0041 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 5758 - 5712
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccaccctta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  5758 ttcagaattatacaacttagaattagagaaagttagtcccaccctta 5712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 11921 - 12001
Alignment:
Q  154 gttagtcccacccttaccttatattagatgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 234  Q
    ||||||| |||||||| ||||  |||   ||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  11921 gttagtctcacccttatcttaggttaatcgatcgaactctacaagattgctcctcttctcacaagattcttctcttctctg 12001  T

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Target: scaffold0220 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 19955 - 20006
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  19955 ttcagaattataacacttagaattagagaaagttagtcccacccttacctta 20006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 13950 - 14006
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatatta 179  Q
    ||||||||| ||||||  |  ||||||||||| ||||||||||||||||||| ||||    
T  13950 ttcagaattttacaacccattattagagaaagctagtcccacccttaccttagatta 14006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 4942 - 4992
Alignment:
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  4942 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 4992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 6686 - 6620
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaatt 94  Q
    ||||||||||  |||| ||||||||||||||||||||||||| || |||||||||||||| ||||||    
T  6686 cacaaattcattggatcttctactctattaacaaccaattacgacatcaaaacctaattcccaaatt 6620  T

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Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 127373 - 127302
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgat--cggactctacaagattactcctcttctc 213  Q
    ||||||||||| ||||||||||||||||||| ||||||||||  | ||||||||||| || |||||||||||    
T  127373 attagagaaagctagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctc 127302  T

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Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 126376 - 126305
Alignment:
Q  102 ctacaacatgctaaactcaaattcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||| || ||||  ||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  126376 ctacaacttgttaaatccaatttcagaatcatacaacttagaattagagaaagttagtccca-ccttacctta 126305  T

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Target: scaffold0515 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 5030 - 5081
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  5030 ttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 8961 - 9012
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  8961 ttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 9012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 5030 - 5081
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  5030 ttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 21098 - 21149
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  21098 ttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 21149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 34113 - 34164
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  34113 ttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 34164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 7278 - 7329
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  7278 ttcagaattatacaacttagaattaaagaatgttagtcccaccctcacctta 7329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 69904 - 69853
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  69904 ttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 69853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 67122 - 67173
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  67122 ttcagaattataccacttcgaattagagaaagttagtcccacctttacctta 67173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 18276 - 18340
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgatcg 187  Q
    ||||||||||||||||  |  ||||||||||| ||||| |||||||||||||  |||||||||||    
T  18276 ttcagaattatacaacccattattagagaaagctagtcacacccttaccttaggttagatgatcg 18340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 106098 - 106051
Alignment:
Q  127 gaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  106098 gaatcatacaacttagaattagagaaagttagtcacacccttacctta 106051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 398564 - 398614
Alignment:
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  398564 tcagaattatacaacctagaattaaagaaggttagtcccacccttacctta 398614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 233 - 196
Alignment:
Q  137 acttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||||||||||||||||||||||    
T  233 acttagaattagagaaagttagtcccacccttacctta 196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 4958 - 4999
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgat 185  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  4958 attagagaaagctagtcccacccttaccttatattagatgat 4999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 60874 - 60947
Alignment:
Q  102 ctacaacatgctaaactcaaat-tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |||| |||| | |||||||||||||||||||||||| |||| ||||||| || ||||||||||    
T  60874 ctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatccttacctta 60947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 3473 - 3383
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttct 212  Q
    |||||||| |||||||  |  ||||||||||| ||||||||||||||||||| |||||||||  |||||||||| ||| || ||||||||||    
T  3473 ttcagaatcatacaacgcattattagagaaagctagtcccacccttaccttagattagatgatttcggactcta-aagcttgctcctcttct 3383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 16532 - 16650
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattctcaaattctcataactacaac-------atgctaaactcaaattcagaattatacaacttagaattaga 149  Q
    ||||||||||||||||||| ||||||||||  ||||||  || |||||||||       ||| ||||  ||  |||||||| ||||||||||||||||||    
T  16532 aacaaccaattacaacttctaaacctaattgccaaatttccaaaactacaacctaccacatgttaaatccagtttcagaatcatacaacttagaattaga 16631  T
Q  150 gaaagttagtcccaccctt 168  Q
     ||| ||||||||||||||    
T  16632 taaatttagtcccaccctt 16650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 26728 - 26776
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacc 171  Q
    |||||||||||||||| || ||||||||||||||| |||||||||||||    
T  26728 ttcagaattatacaacctaaaattagagaaagttaatcccacccttacc 26776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 201
Target Start/End: Original strand, 11193 - 11232
Alignment:
Q  162 cacccttaccttatattagatgatcggactctacaagatt 201  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  11193 cacccttaccttagattagatgatcggactctacaagatt 11232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 29389 - 29440
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| |||||||||||||||| ||||  ||||||||||||||||||||    
T  29389 ttcagaatcatacaacttagaattaaagaagattagtcccacccttacctta 29440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 29267 - 29216
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||| |  |||||||||||||||||||||||||||| |||||||||    
T  29267 ttcagaattaaaatacttagaattagagaaagttagtcccactcttacctta 29216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 135554 - 135504
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||| ||||||||||| ||| |||||||||||||||||||||    
T  135554 ttcagaattataca-cttagaattagtgaaggttagtcccacccttacctta 135504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 96399 - 96446
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttac 170  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  96399 ttcagaatcatacaactcagaattagagaaagttagtcccacctttac 96446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 4387 - 4437
Alignment:
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||||||||||||| |||| |||||||||| | ||||||||    
T  4387 tcagaattatacaacttagaattaaagaaggttagtcccatcgttacctta 4437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 14637 - 14575
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgat 185  Q
    ||||||||||||||||  |  ||||||||||| ||||| ||||||||||||| ||||||||||    
T  14637 ttcagaattatacaacccattattagagaaagctagtctcacccttaccttagattagatgat 14575  T

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Target: scaffold0061; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 23695 - 23633
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatgat 185  Q
    ||||||||||||||||  |  ||||||||||| ||||| ||||||||||||| ||||||||||    
T  23695 ttcagaattatacaacccattattagagaaagctagtctcacccttaccttagattagatgat 23633  T

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Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 170
Target Start/End: Original strand, 6383 - 6416
Alignment:
Q  137 acttagaattagagaaagttagtcccacccttac 170  Q
    ||||||||||||||||||||||||||||||||||    
T  6383 acttagaattagagaaagttagtcccacccttac 6416  T

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Target: scaffold0046 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 21814 - 21777
Alignment:
Q  137 acttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  21814 acttagaattagagaaagttagtcccatccttacctta 21777  T

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Target: scaffold0369 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 15638 - 15576
Alignment:
Q  152 aagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    ||||||||||||||||||||||| |||||||||  |||||||||| ||| || |||||||||||    
T  15638 aagttagtcccacccttaccttagattagatgatttcggactcta-aagcttgctcctcttctc 15576  T

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Target: scaffold0819 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 5368 - 5418
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| ||||| ||||||||||| ||| |||||||||||||||||||||    
T  5368 ttcagaatcataca-cttagaattagtgaaggttagtcccacccttacctta 5418  T

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Target: scaffold0625 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 5912 - 5861
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||||||  |||||||||||||||||||||||  |||| ||||||||    
T  5912 ttcagaattataacacttagaattagagaaagttagtatcacctttacctta 5861  T

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Target: scaffold0251 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 20136 - 20086
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||| ||||||||||| ||| ||||||||| |||||||||||    
T  20136 ttcagaattataca-cttagaattagtgaaggttagtcccgcccttacctta 20086  T

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Target: scaffold0175 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 8644 - 8694
Alignment:
Q  123 ttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||| ||||| ||||||||||| ||| |||||||||||||||||||||    
T  8644 ttcagaatcataca-cttagaattagtgaaggttagtcccacccttacctta 8694  T

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Target: scaffold0439 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 12323 - 12373
Alignment:
Q  58 acaaccaattacaacttcaaaacctaattctcaaattctcataactacaac 108  Q
    |||||| ||||||||||| ||||||||||||||||||  || |||||||||    
T  12323 acaacctattacaacttctaaacctaattctcaaatttccaaaactacaac 12373  T

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Target: scaffold0086 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 35234 - 35145
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttaccttatattagatga--tcggactctacaagattactcctcttctc 213  Q
    |||||||||||||  |  ||||| ||||| |||| |||||||||||||| ||| | |||  |||||||||||||| || |||||||||||    
T  35234 agaattatacaacccattattagggaaagctagtaccacccttaccttagattggttgaattcggactctacaagcttgctcctcttctc 35145  T

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Target: scaffold0065 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 52594 - 52544
Alignment:
Q  124 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    ||||||||| ||||||||||||||  ||| |||||||||||||||| ||||    
T  52594 tcagaattacacaacttagaattaatgaaggttagtcccacccttatctta 52544  T

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Target: scaffold0859 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 4612 - 4661
Alignment:
Q  59 caaccaattacaacttcaaaacctaattctcaaattctcataactacaac 108  Q
    |||| |||||||||||| ||||||||||||||||||| || ||| |||||    
T  4612 caactaattacaacttctaaacctaattctcaaattcccaaaaccacaac 4661  T

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Target: scaffold0555 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 8776 - 8731
Alignment:
Q  144 attagagaaagttagtcccacccttaccttatattagatgatcgga 189  Q
    ||||||| ||| ||||| ||||||||||||| ||||||||||||||    
T  8776 attagagtaagctagtctcacccttaccttagattagatgatcgga 8731  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 18749 - 18701
Alignment:
Q  126 agaattatacaacttagaattagagaaagttagtcccacccttacctta 174  Q
    |||||||||||||| |  |||||||||||||| ||||||||| ||||||    
T  18749 agaattatacaactcattattagagaaagttaatcccaccctcacctta 18701  T

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