View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8180A_low_264 (Length: 237)

Name: NF8180A_low_264
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8180A_low_264
NF8180A_low_264
[»] chr5 (11 HSPs)
chr5 (16-230)||(5506065-5506279)
chr5 (16-230)||(28704380-28704592)
chr5 (19-230)||(759656-759866)
chr5 (13-230)||(30490210-30490427)
chr5 (29-230)||(28678397-28678598)
chr5 (16-123)||(34016454-34016561)
chr5 (58-221)||(26506600-26506760)
chr5 (68-222)||(17343784-17343936)
chr5 (68-198)||(20884320-20884449)
chr5 (16-48)||(35049156-35049188)
chr5 (16-48)||(38740219-38740251)
[»] chr7 (9 HSPs)
chr7 (16-230)||(38386677-38386890)
chr7 (16-230)||(38048136-38048349)
chr7 (16-230)||(4543-4756)
chr7 (16-230)||(19363551-19363764)
chr7 (46-198)||(44225336-44225488)
chr7 (68-184)||(2368802-2368917)
chr7 (58-123)||(24503472-24503537)
chr7 (16-48)||(23943354-23943386)
chr7 (16-48)||(44226109-44226141)
[»] chr4 (9 HSPs)
chr4 (16-230)||(55527275-55527488)
chr4 (16-229)||(24973509-24973721)
chr4 (16-230)||(34234476-34234688)
chr4 (16-105)||(45245114-45245203)
chr4 (46-198)||(50007333-50007485)
chr4 (46-194)||(50335099-50335247)
chr4 (58-111)||(41784362-41784415)
chr4 (16-48)||(18486722-18486754)
chr4 (16-48)||(41420271-41420303)
[»] chr1 (11 HSPs)
chr1 (16-230)||(33401890-33402103)
chr1 (16-229)||(33618316-33618529)
chr1 (16-230)||(48026492-48026705)
chr1 (16-229)||(28475246-28475458)
chr1 (143-222)||(7318927-7319006)
chr1 (46-198)||(12066929-12067081)
chr1 (27-113)||(35563983-35564065)
chr1 (61-180)||(30704112-30704230)
chr1 (46-111)||(23942632-23942698)
chr1 (16-48)||(25818809-25818841)
chr1 (62-102)||(38810769-38810809)
[»] chr6 (6 HSPs)
chr6 (16-222)||(12704320-12704525)
chr6 (16-230)||(32274962-32275176)
chr6 (19-230)||(4319590-4319800)
chr6 (16-230)||(31484140-31484354)
chr6 (46-198)||(1030593-1030745)
chr6 (16-48)||(1031372-1031404)
[»] chr8 (7 HSPs)
chr8 (16-230)||(5966646-5966859)
chr8 (16-230)||(34278955-34279168)
chr8 (46-197)||(5016468-5016619)
chr8 (58-111)||(15893493-15893546)
chr8 (58-111)||(30944382-30944435)
chr8 (16-48)||(5015817-5015849)
chr8 (16-48)||(41601259-41601291)
[»] chr3 (13 HSPs)
chr3 (16-230)||(35068659-35068872)
chr3 (16-222)||(39646263-39646468)
chr3 (16-230)||(34084585-34084793)
chr3 (16-122)||(19871628-19871734)
chr3 (148-229)||(19871550-19871631)
chr3 (68-198)||(20514680-20514809)
chr3 (46-198)||(30930404-30930556)
chr3 (46-198)||(14439627-14439778)
chr3 (68-198)||(54336116-54336245)
chr3 (143-222)||(27933682-27933757)
chr3 (173-222)||(30530705-30530754)
chr3 (58-111)||(30530809-30530862)
chr3 (16-48)||(54336403-54336435)
[»] chr2 (7 HSPs)
chr2 (16-230)||(8273738-8273951)
chr2 (46-222)||(26225153-26225333)
chr2 (46-222)||(35003717-35003891)
chr2 (68-196)||(9827724-9827851)
chr2 (134-198)||(22728943-22729007)
chr2 (173-222)||(14330129-14330178)
chr2 (16-48)||(26224515-26224547)
[»] scaffold0700 (1 HSPs)
scaffold0700 (68-222)||(4357-4509)
[»] scaffold0015 (1 HSPs)
scaffold0015 (134-198)||(32490-32554)


Alignment Details
Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 5506279 - 5506065
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  5506279 taaacacacttaatgacacgtaaacaattcaaaataattcatttcatatatttatataatattagttacatattggccataaatatcaaaattacacagc 5506180  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    ||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  5506179 cggccaccaaaaaaatatgtcggggtctaataccaccaaaaaatatgacgaacaccgaccgacccaaaaatgtcataacctatctaactagactagtgat 5506080  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  5506079 agtgcatattcttcg 5506065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 28704380 - 28704592
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |    
T  28704380 taaacacacttaatgacacgtaaacgatccaaaataattcatttcatatatttatataatattagttacatattggccataaatatcaaaattacacaac 28704479  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    ||||||||        |||||||||| |||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||||||||||||| ||||    
T  28704480 cggccaccaaaaaa--atgtcggggtgtaataccaccaaaaaataggacgaacaccgaccgacccaaaagtgtcataacctatctaactagactattgat 28704577  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  28704578 agtgcatattcttcg 28704592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 759656 - 759866
Alignment:
Q  19 acacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagccgg 118  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||     
T  759656 acacacttaatgacacgcaaatgatccaaaataattcatttcatatatttatataatattagttacatattggccataaatatcaaaattacacaaccga 759755  T
Q  119 ccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgataat 218  Q
    |||||       ||||| ||||| |||||||||||||||||| |||||||| |||| |||| |||| ||||||||||||||||||||||||||||||| |    
T  759756 ccacc-aaaaaatatgttggggtgtaataccaccaaaaaataggacgaacaccgactgacccaaaagtgtcataacctatctaactagactagtgatagt 759854  T
Q  219 gcattttcttcg 230  Q
    |||| |||||||    
T  759855 gcatattcttcg 759866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 30490210 - 30490427
Alignment:
Q  13 atataaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacac 112  Q
    |||||| || |||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  30490210 atataagcagacttaatgacacgtaaacaatccaaaacaattcatttcatatatttatataatattagttacatattggccataaatatcaaaattacac 30490309  T
Q  113 agccggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagt 212  Q
    | |||||||||       ||| ||||||| |||||||| ||||||| |||||||||| ||||||||| | || ||||||||| |||||||||||||||||    
T  30490310 aaccggccaccaaaaaaatatttcggggtgtaataccaacaaaaaaaatgacgaacaccgaccgacccagaagtgtcataacatatctaactagactagt 30490409  T
Q  213 gataatgcattttcttcg 230  Q
    |||| ||||| |||||||    
T  30490410 gatagtgcatattcttcg 30490427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 29 - 230
Target Start/End: Original strand, 28678397 - 28678598
Alignment:
Q  29 tgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnn 128  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| | |||||||         
T  28678397 tgacacataaacgatccaaaataattcatttcatatatttatataatattagttacatattggccataaatatcaaaattacacaactggccaccaaaaa 28678496  T
Q  129 nntatgtc-ggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgataatgcattttct 227  Q
      | |||| ||||| |||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||||||||||||| ||||| ||||| ||||    
T  28678497 att-tgtcgggggtgtaataccaccaaaaaataggacgaacaccgaccgacccaaaagtgtcataacctatctaactagactattgatagtgcatattct 28678595  T
Q  228 tcg 230  Q
    |||    
T  28678596 tcg 28678598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 34016454 - 34016561
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |    
T  34016454 taaacacacttaatgacacgtaaacgatccaaaataaatcatttcatatatttatataatattagttacatattgacaataaatatcaaaattacacaac 34016553  T
Q  116 cggccacc 123  Q
    | ||||||    
T  34016554 cagccacc 34016561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 26506600 - 26506760
Alignment:
Q  58 ttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtctaataccaccaaaaa 157  Q
    ||||||||||||||||||||||||||||| |||| || ||||||| |||||||| | |||||||||       || |||||  | |||||||||||||||    
T  26506600 ttcatatatttatataatattagttacatattggccacaaatatccaaattacataaccggccaccaaaaaa-tacgtcgg--tataataccaccaaaaa 26506696  T
Q  158 atatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgataatgca 221  Q
    ||| |||||||| ||||  ||| |||| ||||||||||||||||||||||||||||||| ||||    
T  26506697 ataggacgaacaccgacgaaccaaaaagtgtcataacctatctaactagactagtgatagtgca 26506760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 17343936 - 17343784
Alignment:
Q  68 tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaa 167  Q
    |||||||||||||||| || |||| |||||||||| |||||||| | |||||||||       || |||||||| ||||||||| |||||||| ||||||    
T  17343936 tatataatattagttatatattggccataaatatccaaattacataaccggccaccaaaaaa-tacgtcggggtgtaataccac-aaaaaataggacgaa 17343839  T
Q  168 catcgaccgacctaaaaatgtcataacctatctaactagactagtgataatgcat 222  Q
    || ||||||| | |||| |||||||||||| |||||||| ||||||||| |||||    
T  17343838 caccgaccgatcaaaaagtgtcataacctagctaactaggctagtgatagtgcat 17343784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 20884320 - 20884449
Alignment:
Q  68 tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaa 167  Q
    ||||||||||||||||||| |||| || |||||||||||||||| | |||||||||       || |||||| | |||||||||||||||||| ||||||    
T  20884320 tatataatattagttacatattggccacaaatatcaaaattacataaccggccaccaaaaaa-tacgtcgggatgtaataccaccaaaaaataggacgaa 20884418  T
Q  168 catcgaccgacctaaaaatgtcataacctat 198  Q
    || ||||||||||| || |||| ||||||||    
T  20884419 caccgaccgacctataagtgtcctaacctat 20884449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 35049156 - 35049188
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaa 48  Q
    |||||||||||||||||||||||| ||||||||    
T  35049156 taaacacacttaatgacacgtaaacgatccaaa 35049188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 38740251 - 38740219
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaa 48  Q
    |||||||||||||||||||||||| ||||||||    
T  38740251 taaacacacttaatgacacgtaaacgatccaaa 38740219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 38386677 - 38386890
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |    
T  38386677 taaacacacttaatgacacgtaaacgatccaaaataattcatttcatatatttatataatattagttacatattggccataaatatcaaaattacacaac 38386776  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    ||||||||       ||||||||||| ||||||||||||||||||||||||||| ||||||| | |||| ||||||||||||||||||||||||||||||    
T  38386777 cggccacc-aaaaaatatgtcggggtgtaataccaccaaaaaatatgacgaacaccgaccgatccaaaagtgtcataacctatctaactagactagtgat 38386875  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  38386876 agtgcatattcttcg 38386890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 38048136 - 38048349
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||      
T  38048136 taaactcacttaatgacacgtaaacgatccaaaataattcatttcatatatttatataatattagttacatattggccataaatatcaaaattacacaat 38048235  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    ||||||||       ||||||||||| ||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  38048236 cggccacc-aaaaaatatgtcggggtgtaataccaccaaaaaatatgacgaacaccgaccgacccaaaagtgtcataacctatctaactagactagtgat 38048334  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  38048335 agtgcatattcttcg 38048349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 4756 - 4543
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||| |||| ||||||||||||||||||||| |    
T  4756 taaacacacttaatgacacgtaaacgatccaaaataattcattttatttatttatttaatattagttacatattggccataaatatcaaaattacacaac 4657  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    ||||||||       ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  4656 cggccacc-aaaaaatatgtcggggtgtaataccaccaaaaaatatgacgaacaccgaccgatctaaaagtgtcataacctatctaactagactagtgat 4558  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  4557 agtgcatattcttcg 4543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 19363764 - 19363551
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||||||| |    
T  19363764 taaacacacttaatgacaggtaaacgatccaaaataattcatttcatatatatatataatattagttacatattagccataaatatcaaaattacacaac 19363665  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    ||||||||       ||||||||||| ||||||||| |||| |||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||    
T  19363664 cggccacc-aaaaaatatgtcggggtgtaataccactaaaatatatgacgaacatcgatcgatccaaaagtgtcataacctatctaactagactagtgat 19363566  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  19363565 agtgcatattcttcg 19363551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 198
Target Start/End: Complemental strand, 44225488 - 44225336
Alignment:
Q  46 aaaataattcatttcatatatt-tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtcta 144  Q
    ||||||||||||||||| || | ||||||||||||||||||| |||| || ||||||| |||||||| | |||||||||       || |||||||| ||    
T  44225488 aaaataattcatttcatttaatatatataatattagttacatattggccacaaatatccaaattacataaccggccaccaaaaaa-tacgtcggggtgta 44225390  T
Q  145 ataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctat 198  Q
    |||||||||||||||| |||||||| ||||||||||| || |||| ||||||||    
T  44225389 ataccaccaaaaaataggacgaacaccgaccgacctataagtgtcctaacctat 44225336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 2368802 - 2368917
Alignment:
Q  68 tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaa 167  Q
    ||||||||||||||||||| |||| || ||||||| ||||||||   |||||||||       || |||||||| |||||||||||||||||| ||||||    
T  2368802 tatataatattagttacatattggccacaaatatccaaattacatgaccggccaccaaaaaa-tacgtcggggtgtaataccaccaaaaaataggacgaa 2368900  T
Q  168 catcgaccgacctaaaa 184  Q
    || ||||||||| ||||    
T  2368901 caccgaccgaccaaaaa 2368917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 24503537 - 24503472
Alignment:
Q  58 ttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagccggccacc 123  Q
    |||||||||||||| ||||||||||| || |||| || ||||||| |||||||| | |||||||||    
T  24503537 ttcatatatttatacaatattagttaaatattggccacaaatatccaaattacatatccggccacc 24503472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 23943386 - 23943354
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaa 48  Q
    |||||||||||||||||||||||| ||||||||    
T  23943386 taaacacacttaatgacacgtaaacgatccaaa 23943354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 44226141 - 44226109
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaa 48  Q
    |||||||||||||||||||||||| ||||||||    
T  44226141 taaacacacttaatgacacgtaaacgatccaaa 44226109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 55527488 - 55527275
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  55527488 taaacacgcttaatgacacgtaaacgatccaaaataattcatttcatatatttatataatattagttacatgttggccataaatatcaaaattacacaac 55527389  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    ||||||||       ||||||||||| |||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  55527388 cggccacc-aaaaaatatgtcggggtgtaataccaccaaaaaataggacgaacaccgaccgacccaaaagtgtcataacctatctaactagactagtgat 55527290  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  55527289 agtgcatattcttcg 55527275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 24973721 - 24973509
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |    
T  24973721 taaacacacttaatgacacgtaaacgatccaaaataattcatttcatatatttatataatattagttacattttggccataaatatcaaaattacacaac 24973622  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    ||||||||       ||||||||||| ||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| ||||    
T  24973621 cggccacc-aaaaaatatgtcggggtgtaataccacaaaaaaatatgacgaacaccgaccgacccaaaagtgtcataacctatctaactagactattgat 24973523  T
Q  216 aatgcattttcttc 229  Q
    | ||| | ||||||    
T  24973522 agtgcctattcttc 24973509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 34234476 - 34234688
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||||||||||||| |    
T  34234476 taaacacacttaatgacacgtaaatgatccaaaataattcatttcatatatttatataatattagttacatattgaccgtaaatatcaaaattacacaac 34234575  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    | || |||       ||||||| ||  |||||||| |||||||||  ||||||| ||||||||| |||| ||||||||||||| ||||||||||||||||    
T  34234576 cagcaacc-aaaaaatatgtcgaggcgtaatacca-caaaaaatagaacgaacaccgaccgacccaaaagtgtcataacctatataactagactagtgat 34234673  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  34234674 agtgcatattcttcg 34234688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 45245114 - 45245203
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaa 105  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  45245114 taaacacacttaatgacacgtaaacgatccaaaataattcatttcatatatttatataatattagttacatattggccataaatatcaaa 45245203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 50007333 - 50007485
Alignment:
Q  46 aaaataattcatttcatatatt-tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtcta 144  Q
    ||||||||||||||||| || | ||||||||||||||||||| |||| || ||||||| |||||||  | |||||||||       ||||||||||| ||    
T  50007333 aaaataattcatttcatttaatatatataatattagttacatattggccaaaaatatccaaattacttaaccggccaccaaaaaa-tatgtcggggtgta 50007431  T
Q  145 ataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctat 198  Q
    |||||||||||||||| |||||||| ||||||||||| || |||||||||||||    
T  50007432 ataccaccaaaaaataggacgaacaccgaccgacctataagtgtcataacctat 50007485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 50335099 - 50335247
Alignment:
Q  46 aaaataattcatttcatatatt-tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtcta 144  Q
    ||||||||||||||||| || | ||||||||||||||||||| || | || ||||||| |||||||| |  ||||||||       || |||||||| ||    
T  50335099 aaaataattcatttcatttaatatatataatattagttacatattagccacaaatatccaaattacataatcggccaccaaaaaa-tacgtcggggtgta 50335197  T
Q  145 ataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataac 194  Q
    |||||||||||||||| |||||||| ||||||||||| || |||| ||||    
T  50335198 ataccaccaaaaaataggacgaacaccgaccgacctataagtgtcctaac 50335247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 41784415 - 41784362
Alignment:
Q  58 ttcatatatttatataatattagttacatgttggtcataaatatcaaaattaca 111  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||    
T  41784415 ttcatatatttatataatattagttacatattgatcacaaatatccaaattaca 41784362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 18486754 - 18486722
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaa 48  Q
    |||||||||||||||||||||||| ||||||||    
T  18486754 taaacacacttaatgacacgtaaacgatccaaa 18486722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 41420303 - 41420271
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaa 48  Q
    |||||||||||||||||||||||| ||||||||    
T  41420303 taaacacacttaatgacacgtaaacgatccaaa 41420271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 33401890 - 33402103
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |    
T  33401890 taaacacacttaatgacacgtaaacgatccaaaataattcatttcatatatttatataatattagttacatattggccataaatatcaaaattacacaac 33401989  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    ||||||||       ||||||||||| ||||||||| ||||||  ||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  33401990 cggccacc-aaaaaatatgtcggggtgtaataccacaaaaaaaattgacgaacaccgaccgacccaaaagtgtcataacctatctaactagactagtgat 33402088  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  33402089 agtgcatattcttcg 33402103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 33618316 - 33618529
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |    
T  33618316 taaacacacttaatgacacgtaaacgatccaaaataattcatttcatatatttatataatattagttacatattggccataaatatcaaaattacacaac 33618415  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaata-tgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtga 214  Q
    ||||||||       ||||||||||| ||||||||| |||||| | |||||||||  |||||||| |||| |||||||||||||||||||||||||||||    
T  33618416 cggccacc-aaaaaatatgtcggggtgtaataccacaaaaaaaaattgacgaacactgaccgacccaaaagtgtcataacctatctaactagactagtga 33618514  T
Q  215 taatgcattttcttc 229  Q
    |||||||| ||||||    
T  33618515 taatgcatattcttc 33618529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 48026705 - 48026492
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||| |    
T  48026705 taaacacacttaatgacatgtaaacgatccaaaataattcattacatatatttatataatattagttacatattgaccataaatatcaaaattacacaac 48026606  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    |||||| |       ||||||||||| ||||||||||||||||||||||||||| ||||| | | |||| ||||||||||||||||||||||||||| ||    
T  48026605 cggccatc-aaaaaatatgtcggggtgtaataccaccaaaaaatatgacgaacaccgacctatccaaaagtgtcataacctatctaactagactagtcat 48026507  T
Q  216 aatgcattttcttcg 230  Q
    | ||| | |||||||    
T  48026506 agtgcgtattcttcg 48026492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 28475246 - 28475458
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||| |    
T  28475246 taaacacacttaatgacacataaacgatccaaaataattcatttcatatatttatataatattagttacatattggctgtaaatatcaaaattacacaac 28475345  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    || |||||       ||||  ||||| |||||||||||||||||| |||||||| ||||||||| |||| |||||||||||||||||||||||||| |||    
T  28475346 cgaccacc-aaaaaatatgatggggtgtaataccaccaaaaaataggacgaacaccgaccgacccaaaagtgtcataacctatctaactagactagcgat 28475444  T
Q  216 aatgcattttcttc 229  Q
    | ||||| ||||||    
T  28475445 agtgcatattcttc 28475458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 7318927 - 7319006
Alignment:
Q  143 taataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgataatgcat 222  Q
    |||||| || ||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  7318927 taatactacaaaaaaatatgacgaacaccgaccgaccaaaaagtgtcataacctatctaactagactagtgataatgcat 7319006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 198
Target Start/End: Complemental strand, 12067081 - 12066929
Alignment:
Q  46 aaaataattcatttcatatatt-tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtcta 144  Q
    ||||||||||||||||| || | ||||||||||||||||||| |||| || ||||||| |||||||| | |||||||||       || |||||||| ||    
T  12067081 aaaataattcatttcatttaatatatataatattagttacatattggccacaaatatccaaattacataaccggccaccaaaaaa-tacgtcggggtgta 12066983  T
Q  145 ataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctat 198  Q
    |||||||||||||||| |||||||| | ||||||||| ||||||| ||||||||    
T  12066982 ataccaccaaaaaataggacgaacaccaaccgacctataaatgtcctaacctat 12066929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 35563983 - 35564065
Alignment:
Q  27 aatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacaca 113  Q
    |||||||||||||  |||||||||||||    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  35563983 aatgacacgtaaacaatccaaaataatt----tcatatatttatataatattagttacatattggccataaatatcaaaattacaca 35564065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 30704112 - 30704230
Alignment:
Q  61 atatatttatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtctaataccaccaaaaaata 160  Q
    |||||| ||||||||||||||||||| |||| || ||||||| |||||||| | ||||||| |       ||||||||||| |||||||||||||| |||    
T  30704112 atatatatatataatattagttacatattggccacaaatatccaaattacataaccggccatcaaaaaa-tatgtcggggtgtaataccaccaaaatata 30704210  T
Q  161 tgacgaacatcgaccgacct 180  Q
     |||||||| ||||||||||    
T  30704211 ggacgaacaccgaccgacct 30704230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 23942698 - 23942632
Alignment:
Q  46 aaaataattcatttcatatatt-tatataatattagttacatgttggtcataaatatcaaaattaca 111  Q
    ||||||||||||||||| || | ||||||||||||||||||| |||| || ||||||  ||||||||    
T  23942698 aaaataattcatttcatttaatatatataatattagttacatattggccacaaatatacaaattaca 23942632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 25818841 - 25818809
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaa 48  Q
    |||||||||||||||||||||||| ||||||||    
T  25818841 taaacacacttaatgacacgtaaacgatccaaa 25818809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 38810769 - 38810809
Alignment:
Q  62 tatatttatataatattagttacatgttggtcataaatatc 102  Q
    ||||| |||||||| |||||||||||||||||| |||||||    
T  38810769 tatatatatataatgttagttacatgttggtcacaaatatc 38810809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 3e-69; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 222
Target Start/End: Original strand, 12704320 - 12704525
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |    
T  12704320 taaacacacttaatgatacgtaaacgatccaaaataattcatttcatatatttatataatattagttacatattggccataaatatcaaaattacacaac 12704419  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    ||||||||       ||||||||||| |||||||||||||||||| ||||||||  |||||||| |||||||||||| ||||||||||||||||||||||    
T  12704420 cggccacc-aaaaaatatgtcggggtgtaataccaccaaaaaataggacgaacactgaccgacccaaaaatgtcatatcctatctaactagactagtgat 12704518  T
Q  216 aatgcat 222  Q
    | |||||    
T  12704519 attgcat 12704525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 32274962 - 32275176
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |    
T  32274962 taaacacactcaatgacacgtaaacgatccaaaataattcatttcatatatttatataatattaggtacatattggccataaatatcaaaattacacaac 32275061  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    | ||||||       ||||||||||| ||||||||||||||||||| ||||||| ||||| ||| |||| |||||||||||||||||| |||||||||||    
T  32275062 cagccaccaaaaaaatatgtcggggtgtaataccaccaaaaaatataacgaacaccgaccaacccaaaagtgtcataacctatctaacaagactagtgat 32275161  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  32275162 agtgcatattcttcg 32275176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 4319590 - 4319800
Alignment:
Q  19 acacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagccgg 118  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| ||||    
T  4319590 acacacttaatgacacgtaaacgatccaaaataattcatttcatatatttatataataatagttacatattggccataaatatcaaaattacacaaccgg 4319689  T
Q  119 ccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgataat 218  Q
    |||||       |||||| |||| |||||||||||||||||  |||||||| ||||||||| |||| ||||| ||||||||||||||||||||||||| |    
T  4319690 ccacc-aaaaaatatgtcagggtgtaataccaccaaaaaattggacgaacaccgaccgacccaaaagtgtcacaacctatctaactagactagtgatagt 4319788  T
Q  219 gcattttcttcg 230  Q
    |||| |||||||    
T  4319789 gcatattcttcg 4319800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 31484140 - 31484354
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |    
T  31484140 taaacacacttaatgacacgtaaacgatccaaaataattcatttcatatatttatataatattagttacatattggccataaatatcaaaattacacaac 31484239  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccacc-aaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtga 214  Q
    |||||| |       ||| ||||||| |||||||||| |||||||| |||||||| ||||||||| ||||  ||||||||||||||||||||||||||||    
T  31484240 cggccatc-aaaaaatatttcggggtgtaataccaccaaaaaaataggacgaacaccgaccgacccaaaagggtcataacctatctaactagactagtga 31484338  T
Q  215 taatgcattttcttcg 230  Q
    || ||||| |||||||    
T  31484339 tagtgcatattcttcg 31484354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 198
Target Start/End: Complemental strand, 1030745 - 1030593
Alignment:
Q  46 aaaataattcatttcatatatt-tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtcta 144  Q
    |||||||||||| |||| || | ||||||||||||||||||| |||| || ||||||| |||||||| | |||||||||       || |||||||| ||    
T  1030745 aaaataattcatctcatttaatatatataatattagttacatattggccacaaatatccaaattacataaccggccaccaaaaaa-taagtcggggtgta 1030647  T
Q  145 ataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctat 198  Q
    |||||||||||||||| |||||||| ||||||||||| || |||| ||||||||    
T  1030646 ataccaccaaaaaataggacgaacaccgaccgacctataagtgtcctaacctat 1030593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 1031404 - 1031372
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaa 48  Q
    |||||||||||||||||||||||| ||||||||    
T  1031404 taaacacacttaatgacacgtaaacgatccaaa 1031372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 7e-67; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 5966859 - 5966646
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  5966859 taaacacacttagtgacacgtaaacgatccaaactaattcatttcatatatttatataatattagttacatattggtcataaatatcaaaattacacaac 5966760  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    ||| ||||       ||||||| ||| ||||||||| |||||||| |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  5966759 cggtcacc-aaaaaatatgtcgaggtgtaataccacaaaaaaataggacgaacaccgaccgacccaaaagtgtcataacctatctaactagactagtgat 5966661  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  5966660 agtgcatattcttcg 5966646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 34279168 - 34278955
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |    
T  34279168 taaacacacttaatgacacgtaaacgatccaaaataattcatttcatatatttatataatattagttacatattggccataaatataaaaattacacaac 34279069  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    || |||||       ||||||||||| |||||||||||||||||| |||||||| ||| ||| | |||| |||||||||||||||||||| | |||||||    
T  34279068 cgaccacc-aaaaaatatgtcggggtgtaataccaccaaaaaataagacgaacaccgatcgatccaaaagtgtcataacctatctaactaaaatagtgat 34278970  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  34278969 agtgcatattcttcg 34278955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 197
Target Start/End: Original strand, 5016468 - 5016619
Alignment:
Q  46 aaaataattcatttcatatatt-tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtcta 144  Q
    ||||||||| ||||||| || | ||||||||||||||||||| |||| || ||||||| |||||||| | |||||||||       || |||| ||| ||    
T  5016468 aaaataatttatttcatttaatatatataatattagttacatattggccacaaatatccaaattacataaccggccacc-aaaaaatacgtcgaggtgta 5016566  T
Q  145 ataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataaccta 197  Q
    ||||||| |||||||| |||||||| ||||||||||| || |||| |||||||    
T  5016567 ataccacaaaaaaataagacgaacaccgaccgacctataagtgtcctaaccta 5016619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 15893493 - 15893546
Alignment:
Q  58 ttcatatatttatataatattagttacatgttggtcataaatatcaaaattaca 111  Q
    |||||||||||||||||||||| |||||| |||| || ||||||| ||||||||    
T  15893493 ttcatatatttatataatattaattacatattggccacaaatatccaaattaca 15893546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 30944435 - 30944382
Alignment:
Q  58 ttcatatatttatataatattagttacatgttggtcataaatatcaaaattaca 111  Q
    |||||||||||||||||||||||||| || |||| || ||||||| ||||||||    
T  30944435 ttcatatatttatataatattagttagatattggccacaaatatccaaattaca 30944382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 5015817 - 5015849
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaa 48  Q
    |||||||||||||||||||||||| ||||||||    
T  5015817 taaacacacttaatgacacgtaaacgatccaaa 5015849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 41601291 - 41601259
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaa 48  Q
    |||||||||||||||||||||||| ||||||||    
T  41601291 taaacacacttaatgacacgtaaacgatccaaa 41601259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 7e-67; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 35068872 - 35068659
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| |    
T  35068872 taaacacaattaatgacacgtaaacgatccaaaataattcatttcatatatttatataatattagttacatattggccataaatatcaaaattatacaac 35068773  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    ||||||||       |||||| |||| ||||||||| ||||||||||||||||| ||||||||  |||| ||||||||||||||||||||||||||||||    
T  35068772 cggccacc-aaaaaatatgtcagggtgtaataccacaaaaaaatatgacgaacaccgaccgactcaaaagtgtcataacctatctaactagactagtgat 35068674  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  35068673 agtgcatattcttcg 35068659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 16 - 222
Target Start/End: Original strand, 39646263 - 39646468
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |    
T  39646263 taaacacacttaatgacacgtaaacgatccaaaataattcatttcatatatttatataatattagttacatattggccataaatatcaaaattacacaac 39646362  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    | ||||||       ||||||||||| ||||||||| |||||||  |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  39646363 ctgccacc-aaaaaatatgtcggggtgtaataccacaaaaaaatgggacgaacaccgaccgacccaaaagtgtcataacctatctaactagactagtgat 39646461  T
Q  216 aatgcat 222  Q
    | |||||    
T  39646462 agtgcat 39646468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 34084585 - 34084793
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||| |    
T  34084585 taaacacacttaatgacacgtaaacgatccaaaatagttcatttcatatatttatataatattagttacgtattggccataaatatcaaaattacacaac 34084684  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    || |||||       ||||||||||| |||||||||||||||||||||||||     ||||||| ||||||||||||||||||||||||| |||||||||    
T  34084685 cgaccacc-aaaaaatatgtcggggtgtaataccaccaaaaaatatgacgaa-----accgacccaaaaatgtcataacctatctaactaaactagtgat 34084778  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  34084779 agtgcatattcttcg 34084793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 19871734 - 19871628
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||| |    
T  19871734 taaacacactttatgacacgtaaacgatccaaaataattcatttcatatatttatataatattagttacatattgaccataaatatcaaaattacacaac 19871635  T
Q  116 cggccac 122  Q
    |||||||    
T  19871634 cggccac 19871628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 19871631 - 19871550
Alignment:
Q  148 ccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgataatgcattttcttc 229  Q
    |||| |||||||| || ||||| ||||||||| |||| ||||||||||||||||||||||||||||||| ||||| ||||||    
T  19871631 ccacaaaaaaataggatgaacaccgaccgacccaaaagtgtcataacctatctaactagactagtgatagtgcatattcttc 19871550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 20514680 - 20514809
Alignment:
Q  68 tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaa 167  Q
    ||||||||||||||||||| |||| || |||| || |||||||| | |||||||||        |||| ||||| ||||| |||||||||||| ||||||    
T  20514680 tatataatattagttacatattggccacaaatctccaaattacataaccggccacccaaaaaa-atgttggggtgtaatatcaccaaaaaataggacgaa 20514778  T
Q  168 catcgaccgacctaaaaatgtcataacctat 198  Q
    ||||||||||||||||| |||||||| ||||    
T  20514779 catcgaccgacctaaaagtgtcataatctat 20514809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 30930404 - 30930556
Alignment:
Q  46 aaaataattcatttcatatatt-tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtcta 144  Q
    ||||||||||||||||| || | ||||||||||||||||||| || | || ||||||| |||||||| | |||||||||       || ||||||||  |    
T  30930404 aaaataattcatttcatttaatatatataatattagttacatatttgccacaaatatccaaattacataaccggccacc-aaaaaatacgtcggggtgaa 30930502  T
Q  145 ataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctat 198  Q
    ||||||| |||||||| |||||||| ||||||||||| || |||| ||||||||    
T  30930503 ataccacaaaaaaataggacgaacaccgaccgacctataagtgtcctaacctat 30930556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 14439627 - 14439778
Alignment:
Q  46 aaaataattcatttcatatatt-tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtcta 144  Q
    ||||||||||||||||| || | ||||||||||||||||||| |||| || ||||||| |||||||| | |||||||||       ||  | ||||| ||    
T  14439627 aaaataattcatttcatttaatatatataatattagttacatattggccacaaatatccaaattacataaccggccacc-aaaaaatacattggggtgta 14439725  T
Q  145 ataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctat 198  Q
    |||||||||||||||| ||| |||| ||||||||||| || |||| ||||||||    
T  14439726 ataccaccaaaaaataggac-aacaccgaccgacctataagtgtcctaacctat 14439778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 54336245 - 54336116
Alignment:
Q  68 tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaa 167  Q
    ||||||||||||||||||| |||| || ||||||| |||||||| | ||| |||||       || |||||| | ||||||||||| |||||| ||| ||    
T  54336245 tatataatattagttacatattggccacaaatatccaaattacataaccgaccaccagaaaa-tacgtcgggatgtaataccaccagaaaataggacaaa 54336147  T
Q  168 catcgaccgacctaaaaatgtcataacctat 198  Q
    ||| |||||||| ||||  ||||||||||||    
T  54336146 cattgaccgaccaaaaagagtcataacctat 54336116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 27933757 - 27933682
Alignment:
Q  143 taataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgataatgcat 222  Q
    |||||||||||||||||| ||||||||    |||||| |||| |||||||| | |||||| ||||||||||||| |||||    
T  27933757 taataccaccaaaaaataggacgaaca----ccgaccaaaaagtgtcataatcaatctaattagactagtgatagtgcat 27933682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 30530754 - 30530705
Alignment:
Q  173 accgacctaaaaatgtcataacctatctaactagactagtgataatgcat 222  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||| |||||    
T  30530754 accgaccaaaaagtgtcataacctatctaactagactaatgatagtgcat 30530705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 30530862 - 30530809
Alignment:
Q  58 ttcatatatttatataatattagttacatgttggtcataaatatcaaaattaca 111  Q
    |||||||||||||||||||||||||||||  ||  || ||||||| ||||||||    
T  30530862 ttcatatatttatataatattagttacataatgagcacaaatatccaaattaca 30530809  T

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Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 54336435 - 54336403
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaa 48  Q
    |||||||||||||||||||||||| ||||||||    
T  54336435 taaacacacttaatgacacgtaaacgatccaaa 54336403  T

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Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 8273738 - 8273951
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagc 115  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||| |    
T  8273738 taaaaacacttaatgacacataaacgatccaaaataattcatttcatatatttatataatattagttacatattgaccataaatatcaaaattacacaac 8273837  T
Q  116 cggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgat 215  Q
    ||||||||       ||||||||||| ||||||||| |||||||| |||||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  8273838 cggccacc-aaaaaatatgtcggggtgtaataccacaaaaaaataggacgaacatcgaccgacccaaaagtgtcataacctatctaactaaactagtgat 8273936  T
Q  216 aatgcattttcttcg 230  Q
    | ||||| |||||||    
T  8273937 agtgcatattcttcg 8273951  T

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Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 222
Target Start/End: Original strand, 26225153 - 26225333
Alignment:
Q  46 aaaataattcatttcatatatttatataatat------tagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggg 139  Q
    |||||||||||||| |||||||||||||||||      ||||||||| ||| ||||||||||| ||||||||||  ||||||||       |||||||||    
T  26225153 aaaataattcattt-atatatttatataatatataatatagttacatattgatcataaatatccaaattacacaatcggccaccaaaaaa-tatgtcggg 26225250  T
Q  140 gtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgataatgcat 222  Q
    || ||||||||| |||||||| |||||||| ||||||||| |||| ||||||||| |||||| |||||||||||||| |||||    
T  26225251 gtgtaataccacaaaaaaataggacgaacaccgaccgacccaaaagtgtcataacgtatctacctagactagtgatagtgcat 26225333  T

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Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 222
Target Start/End: Complemental strand, 35003891 - 35003717
Alignment:
Q  46 aaaataattcatttcatatatttatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtctaa 145  Q
    |||||| |||||||||||||||||||||||||||||||||| |||  || ||||||| |||||||| | ||| |||||       ||  ||||||| |||    
T  35003891 aaaatatttcatttcatatatttatataatattagttacatattgaccacaaatatccaaattacatatccgaccaccaaaaaa-tacatcggggtgtaa 35003793  T
Q  146 taccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctatctaactagactagtgataatgcat 222  Q
    |||||||| |||||| |||||||| |||| ||||||||| || |||||||||||||||||| ||| ||||| |||||    
T  35003792 taccaccagaaaataggacgaacaccgac-gacctaaaagtgacataacctatctaactaggctattgatagtgcat 35003717  T

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Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 196
Target Start/End: Original strand, 9827724 - 9827851
Alignment:
Q  68 tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaa 167  Q
    ||||||||||||||||||| |||| || ||||||| |||||||| | |||||||||       || |||||||| ||||||||| |||||||| ||||||    
T  9827724 tatataatattagttacatattggccacaaatatccaaattacataaccggccaccaaaaaa-tacgtcggggtgtaataccacaaaaaaataagacgaa 9827822  T
Q  168 catcgaccgacctaaaaatgtcataacct 196  Q
    || ||||||||||| || |||| ||||||    
T  9827823 caccgaccgacctataagtgtcctaacct 9827851  T

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Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 22728943 - 22729007
Alignment:
Q  134 gtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctat 198  Q
    |||||||| |||||||||||||||||| |||||||| ||| |||||||||| |||||||||||||    
T  22728943 gtcggggtgtaataccaccaaaaaataggacgaacaccgatcgacctaaaagtgtcataacctat 22729007  T

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Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 14330129 - 14330178
Alignment:
Q  173 accgacctaaaaatgtcataacctatctaactagactagtgataatgcat 222  Q
    ||||||| |||| |||||||| |||||||||||||||||||||| |||||    
T  14330129 accgaccaaaaactgtcataatctatctaactagactagtgatagtgcat 14330178  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 26224515 - 26224547
Alignment:
Q  16 taaacacacttaatgacacgtaaaagatccaaa 48  Q
    |||||||||||||||||||||||| ||||||||    
T  26224515 taaacacacttaatgacacgtaaacgatccaaa 26224547  T

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Target: scaffold0700 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 4509 - 4357
Alignment:
Q  68 tatataatattagttacatgttggtcataaatatcaaaattacacagccggccaccnnnnnnntatgtcggggtctaataccaccaaaaaatatgacgaa 167  Q
    |||||||||||| ||| || |||| |||||||||| ||||||||||  ||||||||       || |||||||| |||||| ||||||||||| ||||||    
T  4509 tatataatattaattatatattggccataaatatccaaattacacaatcggccaccaaaaaa-tacgtcggggtgtaatacaaccaaaaaataggacgaa 4411  T
Q  168 catcgaccgacctaaaaatgtcataacctatctaactagactagtgataatgcat 222  Q
    || ||||||||| |||  | ||||||||||||||||||||||||||||| |||||    
T  4410 caccgaccgacccaaagtt-tcataacctatctaactagactagtgatagtgcat 4357  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 32554 - 32490
Alignment:
Q  134 gtcggggtctaataccaccaaaaaatatgacgaacatcgaccgacctaaaaatgtcataacctat 198  Q
    |||||||| ||||||||||||||| || ||||||||  ||||  || |||| |||||||||||||    
T  32554 gtcggggtgtaataccaccaaaaactaggacgaacactgacctgccaaaaagtgtcataacctat 32490  T

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