View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8180A_low_287 (Length: 230)
Name: NF8180A_low_287
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8180A_low_287 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 9996442 - 9996213
Alignment:
| Q |
1 |
gtaatccctcgccttacaagtcgattttgtagggttgtgtaaagctaaacctaaatttgattcattacaagaagtcattatttcgcgccattttggattt |
100 |
Q |
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| T |
9996442 |
gtaatccctcgccttacaagtcgattttgtagggttgtgtaaagctaaacccaaatttgattcattacaagaagtcattatttcgcgccattttggattt |
9996343 |
T |
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| Q |
101 |
gaaactcaaatgtttcttcctttgttacatgagagaagaagacataataataaggcttaatttcatattcagtcttgaatatagcaattgtgtaattttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9996342 |
gaaactcaaatgtttcttcctttgttacatgagagaagaagacataataataaggcttaatttcatattcagtcttgaatatagcaattgtgtaattttg |
9996243 |
T |
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| Q |
201 |
gttgctcactttttaattgtgctattttga |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
9996242 |
gttgctcactttttaattgtgctattttga |
9996213 |
T |
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