View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8180A_low_296 (Length: 229)
Name: NF8180A_low_296
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8180A_low_296 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 32691473 - 32691251
Alignment:
| Q |
1 |
gtcattacacataaagagaacgaaaatcaagtcatggaatattttgtaagtggcagggcagtaaagaaataatgcaaaagtaatataaggttaaacatga |
100 |
Q |
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| T |
32691473 |
gtcattacacataaagagaacgaaaatcaagtcatggaatattttgtaagtggcagggcagtaaagaaataatgcaaaagtaatataaggttaaacatga |
32691374 |
T |
|
| Q |
101 |
atgtgtatttgaaaaatagcaggtttatttattcagtttggaactttggattattttattattgatataggaacttttgattttgattgtattggtctgc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
32691373 |
atgtgtatttgaaaaatagcaggtttatttattcagtttggaactttggattattttattattgatataggaactttggattttgattgtattggtctgc |
32691274 |
T |
|
| Q |
201 |
tgttaatttttattccagaaaac |
223 |
Q |
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||||||||| ||||||||||||| |
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| T |
32691273 |
tgttaatttgtattccagaaaac |
32691251 |
T |
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