View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8180A_low_302 (Length: 228)
Name: NF8180A_low_302
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8180A_low_302 |
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Alignment Details
Target: chr3 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 27 - 215
Target Start/End: Complemental strand, 2337378 - 2337190
Alignment:
| Q |
27 |
ttatactaagggcaggtaagagaggaaagcttgagaagataggggaatttactatgtcctacgttgagacaccaaacatgagtgagattcattggattcc |
126 |
Q |
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| T |
2337378 |
ttattctaagggcaggtaagagaggaaagcttgagaagataggagaatttactatgtcctacgttgagacaccaaacatgagtgagattcattggattcc |
2337279 |
T |
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| Q |
127 |
tgacccaacaaattctaagaagtatatccaagagtatgtcatatctccccattcccgtgccttctctccaattttgtagattttgatgt |
215 |
Q |
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| T |
2337278 |
tgacccaacaaatcctaagaagtatatccaagagtatgtcatatctcctcattcccgtgccttctctccagttttgtagattttgatgt |
2337190 |
T |
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