View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8180A_low_313 (Length: 226)
Name: NF8180A_low_313
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8180A_low_313 |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 16 - 208
Target Start/End: Original strand, 40268816 - 40269008
Alignment:
| Q |
16 |
atcaacaaacctcagcttcaagcttagcaatataagctacaagagcagctttatccttatgcttaatcgactcctcatcaaatccagcctccctaagccg |
115 |
Q |
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| T |
40268816 |
atcaacaaacctcagcttcaagcttagcaatataagctacaagagcagctttatccttatgcttaatcgattcctcatcaaatccagcctccctaagccg |
40268915 |
T |
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| Q |
116 |
cttccagatctgttcatcggaaagcggacttctcaaaaccctagaactcggagtaattgacagtggtttggcagagctaggtgtcgaaatctc |
208 |
Q |
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| T |
40268916 |
cttccagatctgttcatcggaaagcggacttctcaaaaccctagaactcggagtaattgacagtggtttggcagagctaggtgtcgaaatctc |
40269008 |
T |
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