View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8180A_low_334 (Length: 218)

Name: NF8180A_low_334
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8180A_low_334
NF8180A_low_334
[»] scaffold0090 (1 HSPs)
scaffold0090 (13-187)||(18062-18236)
[»] scaffold0026 (2 HSPs)
scaffold0026 (32-186)||(11840-11994)
scaffold0026 (16-176)||(111583-111741)
[»] scaffold0025 (1 HSPs)
scaffold0025 (16-173)||(14398-14555)
[»] chr3 (26 HSPs)
chr3 (16-173)||(24192852-24193009)
chr3 (16-175)||(9534225-9534382)
chr3 (32-175)||(14762758-14762901)
chr3 (34-173)||(20247791-20247930)
chr3 (16-176)||(23370505-23370664)
chr3 (32-173)||(38310802-38310943)
chr3 (65-186)||(16801457-16801576)
chr3 (92-186)||(41455087-41455178)
chr3 (61-176)||(24933828-24933941)
chr3 (114-175)||(18929239-18929300)
chr3 (111-175)||(17240513-17240577)
chr3 (16-173)||(55499104-55499261)
chr3 (121-176)||(13302240-13302295)
chr3 (121-176)||(13323787-13323842)
chr3 (121-176)||(12033444-12033499)
chr3 (121-176)||(13312896-13312951)
chr3 (121-176)||(17131732-17131787)
chr3 (121-176)||(51301589-51301644)
chr3 (121-176)||(14865846-14865901)
chr3 (141-176)||(23392819-23392854)
chr3 (119-173)||(16801027-16801081)
chr3 (123-176)||(10389443-10389496)
chr3 (123-176)||(10414532-10414585)
chr3 (123-176)||(10421202-10421255)
chr3 (140-176)||(2247649-2247685)
chr3 (125-181)||(10833303-10833359)
[»] chr5 (15 HSPs)
chr5 (32-187)||(38144525-38144679)
chr5 (29-175)||(28370055-28370200)
chr5 (32-180)||(22751053-22751201)
chr5 (32-175)||(19512298-19512441)
chr5 (61-180)||(23528573-23528690)
chr5 (111-175)||(18407944-18408008)
chr5 (120-186)||(22438736-22438803)
chr5 (111-175)||(23111200-23111264)
chr5 (121-176)||(19236900-19236955)
chr5 (120-187)||(42961566-42961633)
chr5 (123-176)||(22461158-22461211)
chr5 (123-176)||(22467782-22467835)
chr5 (121-176)||(20781744-20781799)
chr5 (122-189)||(34830086-34830152)
chr5 (147-176)||(17021913-17021942)
[»] chr7 (28 HSPs)
chr7 (16-179)||(14422881-14423043)
chr7 (32-180)||(18873272-18873420)
chr7 (23-186)||(12709833-12709995)
chr7 (23-186)||(13122904-13123066)
chr7 (32-175)||(15168087-15168230)
chr7 (34-186)||(13743623-13743774)
chr7 (16-175)||(16009474-16009631)
chr7 (32-171)||(10895795-10895934)
chr7 (61-186)||(12590633-12590756)
chr7 (61-186)||(13007374-13007497)
chr7 (65-173)||(16677239-16677348)
chr7 (65-173)||(17651475-17651584)
chr7 (120-186)||(21230949-21231015)
chr7 (120-175)||(11382871-11382926)
chr7 (120-175)||(11389348-11389403)
chr7 (120-186)||(20311039-20311107)
chr7 (112-175)||(13679485-13679548)
chr7 (121-176)||(2971254-2971309)
chr7 (121-176)||(20906461-20906516)
chr7 (121-175)||(11311059-11311113)
chr7 (140-181)||(831628-831669)
chr7 (140-181)||(1196808-1196849)
chr7 (140-181)||(34958578-34958619)
chr7 (119-175)||(46625961-46626017)
chr7 (120-187)||(148619-148686)
chr7 (121-176)||(29181109-29181164)
chr7 (123-176)||(31155396-31155449)
chr7 (124-176)||(16091078-16091130)
[»] chr2 (17 HSPs)
chr2 (36-186)||(26583744-26583892)
chr2 (29-175)||(6483627-6483772)
chr2 (29-175)||(6487094-6487239)
chr2 (16-175)||(19661454-19661611)
chr2 (61-176)||(5706023-5706137)
chr2 (16-173)||(23878905-23879060)
chr2 (111-175)||(23265133-23265197)
chr2 (111-175)||(23280201-23280265)
chr2 (19-175)||(23101463-23101618)
chr2 (114-175)||(21908353-21908414)
chr2 (19-173)||(23089057-23089210)
chr2 (119-175)||(24661576-24661632)
chr2 (121-176)||(10577-10632)
chr2 (121-176)||(25180929-25180984)
chr2 (76-185)||(26885139-26885246)
chr2 (123-186)||(23168288-23168351)
chr2 (123-186)||(23579545-23579608)
[»] scaffold0924 (1 HSPs)
scaffold0924 (35-186)||(740-892)
[»] scaffold0029 (1 HSPs)
scaffold0029 (32-186)||(111793-111948)
[»] scaffold0247 (1 HSPs)
scaffold0247 (16-186)||(11238-11407)
[»] scaffold0058 (1 HSPs)
scaffold0058 (34-186)||(206-356)
[»] chr8 (14 HSPs)
chr8 (29-176)||(44477532-44477678)
chr8 (29-176)||(44492690-44492836)
chr8 (23-186)||(23866518-23866680)
chr8 (16-173)||(8727735-8727891)
chr8 (61-186)||(17054533-17054656)
chr8 (111-175)||(23482053-23482117)
chr8 (119-175)||(18614271-18614327)
chr8 (120-186)||(14056553-14056619)
chr8 (119-175)||(39364919-39364975)
chr8 (120-186)||(25111976-25112042)
chr8 (121-175)||(29643386-29643440)
chr8 (121-176)||(24320670-24320725)
chr8 (16-187)||(27940840-27941012)
chr8 (119-175)||(21931696-21931752)
[»] chr6 (31 HSPs)
chr6 (16-186)||(18800334-18800503)
chr6 (32-186)||(29614136-29614291)
chr6 (16-186)||(10986170-10986339)
chr6 (16-175)||(4477754-4477912)
chr6 (16-175)||(23839095-23839253)
chr6 (32-175)||(23057850-23057993)
chr6 (41-186)||(930085-930229)
chr6 (61-186)||(12168305-12168428)
chr6 (61-186)||(19287214-19287337)
chr6 (61-186)||(19785859-19785982)
chr6 (61-186)||(19878398-19878521)
chr6 (61-186)||(19884174-19884297)
chr6 (91-176)||(34639986-34640069)
chr6 (111-176)||(34646660-34646725)
chr6 (120-186)||(24512833-24512899)
chr6 (19-173)||(21565214-21565367)
chr6 (111-176)||(25469704-25469767)
chr6 (123-175)||(9187498-9187550)
chr6 (119-175)||(25348486-25348542)
chr6 (119-173)||(25598643-25598697)
chr6 (119-175)||(25397172-25397228)
chr6 (111-176)||(31252413-31252478)
chr6 (119-175)||(19471335-19471391)
chr6 (119-173)||(2286769-2286823)
chr6 (141-175)||(18659450-18659484)
chr6 (141-175)||(24441673-24441707)
chr6 (123-176)||(11288668-11288721)
chr6 (123-176)||(15458492-15458545)
chr6 (123-176)||(15465087-15465140)
chr6 (148-176)||(28288509-28288537)
chr6 (141-181)||(29415551-29415591)
[»] chr1 (16 HSPs)
chr1 (16-175)||(20437024-20437182)
chr1 (61-186)||(41111977-41112100)
chr1 (111-175)||(32651563-32651627)
chr1 (111-175)||(18712790-18712854)
chr1 (120-175)||(19663517-19663572)
chr1 (119-175)||(20805320-20805376)
chr1 (120-175)||(11158093-11158148)
chr1 (119-173)||(10811785-10811839)
chr1 (121-176)||(20851132-20851187)
chr1 (121-176)||(20857759-20857814)
chr1 (121-176)||(21706276-21706331)
chr1 (121-176)||(21710818-21710873)
chr1 (145-175)||(24476350-24476380)
chr1 (145-175)||(25091418-25091448)
chr1 (141-174)||(18271338-18271371)
chr1 (141-174)||(18275992-18276025)
[»] scaffold0553 (1 HSPs)
scaffold0553 (16-176)||(10195-10354)
[»] scaffold0544 (1 HSPs)
scaffold0544 (16-176)||(1525-1684)
[»] scaffold1773 (1 HSPs)
scaffold1773 (32-183)||(1090-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (32-183)||(50091-50241)
[»] chr4 (16 HSPs)
chr4 (51-186)||(8045822-8045955)
chr4 (115-186)||(11848108-11848179)
chr4 (61-176)||(53483646-53483760)
chr4 (120-186)||(15408139-15408205)
chr4 (119-175)||(8834895-8834951)
chr4 (119-175)||(13888641-13888697)
chr4 (121-173)||(14486661-14486713)
chr4 (119-175)||(15245215-15245271)
chr4 (119-170)||(22724691-22724742)
chr4 (140-181)||(15747551-15747592)
chr4 (119-175)||(15308120-15308176)
chr4 (121-176)||(16146830-16146885)
chr4 (121-176)||(27906266-27906321)
chr4 (145-175)||(15069781-15069811)
chr4 (145-175)||(15076381-15076411)
chr4 (119-176)||(14912081-14912138)
[»] scaffold0154 (1 HSPs)
scaffold0154 (55-186)||(30792-30923)
[»] scaffold0117 (2 HSPs)
scaffold0117 (32-186)||(1887-2040)
scaffold0117 (32-186)||(8564-8717)
[»] scaffold0796 (2 HSPs)
scaffold0796 (61-181)||(1727-1845)
scaffold0796 (61-181)||(5750-5868)
[»] scaffold0456 (2 HSPs)
scaffold0456 (109-180)||(920-991)
scaffold0456 (109-180)||(8065-8136)
[»] scaffold0129 (1 HSPs)
scaffold0129 (63-182)||(45268-45386)
[»] scaffold0107 (1 HSPs)
scaffold0107 (120-186)||(40521-40587)
[»] scaffold0222 (1 HSPs)
scaffold0222 (111-175)||(16811-16875)
[»] scaffold0077 (1 HSPs)
scaffold0077 (16-173)||(3624-3780)
[»] scaffold0004 (2 HSPs)
scaffold0004 (111-175)||(116887-116951)
scaffold0004 (141-174)||(60441-60474)
[»] scaffold0310 (1 HSPs)
scaffold0310 (120-186)||(17643-17710)
[»] scaffold0019 (1 HSPs)
scaffold0019 (120-186)||(135473-135539)
[»] scaffold0476 (1 HSPs)
scaffold0476 (16-173)||(3295-3452)
[»] scaffold0461 (1 HSPs)
scaffold0461 (111-175)||(8-72)
[»] scaffold0235 (1 HSPs)
scaffold0235 (122-186)||(22582-22646)
[»] scaffold0146 (1 HSPs)
scaffold0146 (111-175)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (111-175)||(101928-101992)
[»] scaffold0124 (2 HSPs)
scaffold0124 (120-175)||(34276-34331)
scaffold0124 (119-176)||(35438-35495)
[»] scaffold0815 (1 HSPs)
scaffold0815 (124-186)||(1453-1515)
[»] scaffold0138 (1 HSPs)
scaffold0138 (119-175)||(12296-12352)
[»] scaffold2054 (1 HSPs)
scaffold2054 (123-186)||(717-780)
[»] scaffold0317 (1 HSPs)
scaffold0317 (112-175)||(1378-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (120-175)||(14997-15052)
[»] scaffold0790 (1 HSPs)
scaffold0790 (147-187)||(5480-5520)
[»] scaffold0096 (1 HSPs)
scaffold0096 (119-179)||(39503-39563)
[»] scaffold0001 (1 HSPs)
scaffold0001 (121-185)||(493019-493082)
[»] scaffold0348 (1 HSPs)
scaffold0348 (121-176)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (121-176)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (121-176)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (121-175)||(1913-1967)
[»] scaffold0609 (1 HSPs)
scaffold0609 (111-176)||(5857-5922)
[»] scaffold0261 (1 HSPs)
scaffold0261 (121-186)||(23559-23624)
[»] scaffold0335 (1 HSPs)
scaffold0335 (119-175)||(2628-2684)
[»] scaffold0053 (1 HSPs)
scaffold0053 (121-176)||(79490-79545)
[»] scaffold0481 (1 HSPs)
scaffold0481 (129-174)||(676-721)
[»] scaffold0249 (1 HSPs)
scaffold0249 (123-176)||(13894-13947)
[»] scaffold0600 (1 HSPs)
scaffold0600 (119-175)||(732-788)
[»] scaffold0453 (1 HSPs)
scaffold0453 (121-189)||(10537-10605)
[»] scaffold0180 (1 HSPs)
scaffold0180 (126-175)||(11630-11681)
[»] scaffold0034 (1 HSPs)
scaffold0034 (121-173)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (119-175)||(121902-121958)
scaffold0031 (119-175)||(132778-132834)
[»] scaffold0028 (1 HSPs)
scaffold0028 (123-175)||(69749-69801)


Alignment Details
Target: scaffold0090 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 18062 - 18236
Alignment:
Q  13 tggacatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaaccct-aaccctcaatttattttccaaaagctattgc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||||| |||||||  ||    
T  18062 tggacatcacattacaaacagaattaacatgaccattaccatttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagctaa-gc 18160  T
Q  112 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaat 187  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18161 aattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaat 18236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 32 - 186
Target Start/End: Complemental strand, 11994 - 11840
Alignment:
Q  32 agaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcag 129  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||    
T  11994 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaa-ctat-gcaattaggtcaattttcag 11897  T
Q  130 aaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11896 aaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 111583 - 111741
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||    
T  111583 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaat 111679  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111680 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 14555 - 14398
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaa 113  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||    
T  14555 acatcacattacaa-cagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaa 14458  T
Q  114 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14457 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 9e-57; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 24192852 - 24193009
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaa 113  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||    
T  24192852 acatcacattacaa-cagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaa 24192949  T
Q  114 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24192950 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 9534225 - 9534382
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||  |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||    
T  9534225 acattacattacaa-cagaattaacatgatcaatacccattccactcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaat 9534321  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9534322 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 14762901 - 14762758
Alignment:
Q  32 agaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcag 129  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  14762901 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcag 14762804  T
Q  130 aaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  14762803 aaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 20247930 - 20247791
Alignment:
Q  34 aattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaa 131  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  20247930 aattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcagaa 20247833  T
Q  132 attatagattatgattattgagagatagtctcacccttacct 173  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20247832 attatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 23370664 - 23370505
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| |||||    
T  23370664 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaat 23370567  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23370566 taggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 38310943 - 38310802
Alignment:
Q  32 agaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcag 129  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||| |||||    
T  38310943 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaatattcag 38310846  T
Q  130 aaattatagattatgattattgagagatagtctcacccttacct 173  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  38310845 aaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 16801576 - 16801457
Alignment:
Q  65 aatcatcatcaaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 164  Q
    |||||||||||||||||||| |||||||  | | |||||||||  ||||| |||||||||||||||||||||| || |||||||||||||||||||||||    
T  16801576 aatcatcatcaaccctaaccttcaattttatcttcaaaagctaa-gcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctca 16801479  T
Q  165 cccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||    
T  16801478 cccttaccttagttttgcagaa 16801457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 41455178 - 41455087
Alignment:
Q  92 tattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41455178 tattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 24933941 - 24933828
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| ||||||   |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24933941 tcagaatcatcatcaaaccctaattttcatattattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 24933845  T
Q  160 tctcacccttaccttag 176  Q
    |||||||||||||||||    
T  24933844 tctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  114 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 55499261 - 55499104
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||||||||||||| || ||||||||||| |||||||  ||||| |||||||||||||| |||||||||||||||||  || |||  ||| |   ||| |    
T  55499261 acatcacattacaa-cataattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggttaagcagt 55499165  T
Q  115 taggtcaatttt-cagaaattatagattat-gattattgagagatagtctcacccttacct 173  Q
    |||||||||||| | ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  55499164 taggtcaattttcccgaaattacatattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 14865846 - 14865901
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  14865846 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 14865901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 23392854 - 23392819
Alignment:
Q  141 tatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttag 23392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 16801027 - 16801081
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 173  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 16801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 10389496 - 10389443
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10389496 ttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 10414585 - 10414532
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10414585 ttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 10421255 - 10421202
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10421255 ttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 2247685 - 2247649
Alignment:
Q  140 ttatgattattgagagatagtctcacccttaccttag 176  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttag 2247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 10833359 - 10833303
Alignment:
Q  125 ttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 181  Q
    ||||||| ||||| | |||||||| |||  | |||||||||||||||||||||||||    
T  10833359 ttcagaatttatacactatgattactgaatgttagtctcacccttaccttagttttg 10833303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 1e-55; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 38144679 - 38144525
Alignment:
Q  32 agaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcaga 130  Q
    ||||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||||||||||||  |  ||||||||||||||||||||||    
T  38144679 agaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaa--ttatgcaattaggtcaattttcaga 38144582  T
Q  131 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaat 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144581 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaat 38144525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 28370200 - 28370055
Alignment:
Q  29 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 127  Q
    |||||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  28370200 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattttc 28370103  T
Q  128 agaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28370102 agaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 22751053 - 22751201
Alignment:
Q  32 agaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcag 129  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  22751053 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcag 22751150  T
Q  130 aaattatagattatgattattgagagatagtctcacccttaccttagtttt 180  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  22751151 aaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 19512298 - 19512441
Alignment:
Q  32 agaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcaga 130  Q
    ||||||||||||| || ||||  ||||| ||| |||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  19512298 agaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaattttcaga 19512396  T
Q  131 aattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19512397 aattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 23528573 - 23528690
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23528573 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 23528669  T
Q  160 tctcacccttaccttagtttt 180  Q
    |||||||||||||||||||||    
T  23528670 tctcacccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 22438803 - 22438736
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaa 186  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaa 22438736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 42961566 - 42961633
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaat 187  Q
    |||||||||||||| ||| ||||| || |||||  | ||| |||||||||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaat 42961633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 20781744 - 20781799
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||| ||| ||||| |||||||| ||||| || ||||||||||||||    
T  20781744 aattttcagaaatcatatattataattattgaaagataatcccacccttaccttag 20781799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 34830086 - 34830152
Alignment:
Q  122 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatta 189  Q
    |||||||||||||||| ||||  |||||||| ||||| || ||||||||||||||  |||||||||||    
T  34830086 attttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgcagaatta 34830152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 176
Target Start/End: Complemental strand, 17021942 - 17021913
Alignment:
Q  147 tattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttag 17021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 5e-55; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 14422881 - 14423043
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||    
T  14422881 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaat 14422978  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14422979 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 18873272 - 18873420
Alignment:
Q  32 agaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcag 129  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  18873272 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcag 18873369  T
Q  130 aaattatagattatgattattgagagatagtctcacccttaccttagtttt 180  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  18873370 aaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 12709995 - 12709833
Alignment:
Q  23 attacaaacagaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtc 120  Q
    |||||||| ||||||||||||| ||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||    
T  12709995 attacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtc 12709898  T
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12709897 aattt-caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 13123066 - 13122904
Alignment:
Q  23 attacaaacagaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtc 120  Q
    |||||||| ||||||||||||| ||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||    
T  13123066 attacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtc 13122969  T
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13122968 aattt-caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 15168087 - 15168230
Alignment:
Q  32 agaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcag 129  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  15168087 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcag 15168184  T
Q  130 aaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  15168185 aaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 34 - 186
Target Start/End: Original strand, 13743623 - 13743774
Alignment:
Q  34 aattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaa 131  Q
    ||||||||||| ||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |    
T  13743623 aattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagga 13743719  T
Q  132 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13743720 attataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 16009474 - 16009631
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaaccct-aaccctcaatttattttccaaaagctattgcaat 114  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||||||||||| ||| ||||| |||||||| |||||||| |   ||||||    
T  16009474 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccttaacccacaatttatcttccaaaacca--tgcaat 16009570  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16009571 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 10895934 - 10895795
Alignment:
Q  32 agaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcaga 130  Q
    ||||||||||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| ||||||||||||||||||| |    
T  10895934 agaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaattaggtcaattttcaaa 10895836  T
Q  131 aattatagattatgattattgagagatagtctcacccttac 171  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10895835 aattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 12590756 - 12590633
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12590756 tcagaatcatcatcaaaccctaactttcatattattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 12590660  T
Q  160 tctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||    
T  12590659 tctcacccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 13007374 - 13007497
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13007374 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 13007470  T
Q  160 tctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||    
T  13007471 tctcacccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 173
Target Start/End: Original strand, 16677239 - 16677348
Alignment:
Q  65 aatcatcatcaa-ccctaaccctcaattt-attttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 162  Q
    |||||||||||| |||||||||| ||||| || |||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16677239 aatcatcatcaaaccctaacccttaattttatcttccaaaaactat-gcaattaggtcaatttttagaaattatagattatgattattgagagatagtct 16677337  T
Q  163 cacccttacct 173  Q
    |||||||||||    
T  16677338 cacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 173
Target Start/End: Original strand, 17651475 - 17651584
Alignment:
Q  65 aatcatcatcaa-ccctaaccctcaattt-attttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 162  Q
    |||||||||||| |||||||||| ||||| || |||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17651475 aatcatcatcaaaccctaacccttaattttatcttccaaaaactat-gcaattaggtcaatttttagaaattatagattatgattattgagagatagtct 17651573  T
Q  163 cacccttacct 173  Q
    |||||||||||    
T  17651574 cacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 21231015 - 21230949
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaa 21230949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 20311107 - 20311039
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag--ttttgcagaa 186  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaa 20311039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 13679485 - 13679548
Alignment:
Q  112 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||| ||||||| || | ||| |||||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  140 ttatgattattgagagatagtctcacccttaccttagttttg 181  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  140 ttatgattattgagagatagtctcacccttaccttagttttg 181  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  140 ttatgattattgagagatagtctcacccttaccttagttttg 181  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||| ||||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 148619 - 148686
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaat 187  Q
    |||||||||||||  ||| ||||| || |||||  | ||| |||||||||||||||||||||||||||    
T  148619 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagttttgcagaat 148686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 29181164 - 29181109
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  29181164 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 29181109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 31155396 - 31155449
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 31155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 16091078 - 16091130
Alignment:
Q  124 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    |||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16091078 tttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 36 - 186
Target Start/End: Original strand, 26583744 - 26583892
Alignment:
Q  36 ttaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaatt 134  Q
    ||||||||| ||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  26583744 ttaacatgatcattaccctttcccctcagaatcatcatcaagccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagaaatt 26583840  T
Q  135 atagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583841 atagattatgattattgagagatagtctcacccttaccttagttttgcagaa 26583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 6483627 - 6483772
Alignment:
Q  29 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 127  Q
    |||||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  6483627 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattttc 6483724  T
Q  128 agaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483725 agaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 6487094 - 6487239
Alignment:
Q  29 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 127  Q
    |||||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  6487094 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattttc 6487191  T
Q  128 agaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6487192 agaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 19661611 - 19661454
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||    
T  19661611 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaat 19661515  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  19661514 taggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| ||||||   |||  ||||||| ||||| ||||| ||||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactatt-caattaggtcaattt-caggaattatagattatgattaatgagagatag 5706040  T
Q  160 tctcacccttaccttag 176  Q
    |||||||||||||||||    
T  5706039 tctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 23878905 - 23879060
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccat-ttcccgtcagaatcatcatcaaccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||||||||||||| || ||||||||||| |||||||   ||||| |||||||||||| |||||||||||||||||||| |  ||  ||| |   |||||    
T  23878905 acatcacattacaa-cataattaacatgatcattaccccattcccctcagaatcatcaacaaccctaaccctcaatttaat--cctcaaggttaagcaat 23879001  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 173  Q
    ||||||||||||  ||||||||| || || |||| ||||||||||||||||||||||||    
T  23879002 taggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 23101618 - 23101463
Alignment:
Q  19 tcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattag 117  Q
    ||||||||||| || ||||||||||| |||||||  ||||| |||||||||||||| |||||||||||||||||  || |||  ||| |    |||||||    
T  23101618 tcacattacaa-cataattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggttaaacaattag 23101522  T
Q  118 gtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacctta 175  Q
    |||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||||    
T  23101521 gtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  114 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 23089210 - 23089057
Alignment:
Q  19 tcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattag 117  Q
    ||||||||||| || ||||||||||| |||||||  ||||| | |||||||||||||| ||||||||||||||||  | |||  ||| |   ||||||||    
T  23089210 tcacattacaa-cataattaacatgatcattacccattccccttagaatcatcatcaaaccctaaccctcaattt--tatcctcaaggttaagcaattag 23089114  T
Q  118 gtcaattttcagaaattatagattatg-attattgagagatagtctcacccttacct 173  Q
    |||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  23089113 gtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 26885139 - 26885246
Alignment:
Q  76 accctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||  |||||||| || ||||| | ||||| || |||| | ||||||||||||||||| |||| ||||||||| ||||| || |||||||||||||    
T  26885139 accctaattctcaattttttctccaagaactattcca-ttagattaattttcagaaattatacatta-gattattgaaagataatcccacccttacctta 26885236  T
Q  176 gttttgcaga 185  Q
    |  |||||||    
T  26885237 gaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 23168351 - 23168288
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||  ||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 23579608 - 23579545
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||  ||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 892 - 740
Alignment:
Q  35 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 132  Q
    |||| ||||| ||||||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  892 attatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactat-gcaattaggtcaattttcagaaa 794  T
Q  133 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  793 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 32 - 186
Target Start/End: Original strand, 111793 - 111948
Alignment:
Q  32 agaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt-ca 128  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||| ||    
T  111793 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaatttttca 111890  T
Q  129 gaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111891 gaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 111948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 11238 - 11407
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatt-tattttccaaaagctattgcaa 113  Q
    |||||||||||||| |||||||||||||| ||||||   |||||  ||||||||||||||| ||||||||||||||| |||||||||||| |||  ||||    
T  11238 acatcacattacaa-cagaattaacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaa-gcaa 11334  T
Q  114 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11335 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 34 - 186
Target Start/End: Original strand, 206 - 356
Alignment:
Q  34 aattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 132  Q
    ||||||||||| |||||||  ||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  206 aattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagaaa 302  T
Q  133 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  303 ttatagattatggttattgagagatagtctcacccttaccttagttttgcagaa 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 3e-50; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 44477532 - 44477678
Alignment:
Q  29 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 127  Q
    |||||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  44477532 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattttc 44477629  T
Q  128 agaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44477630 agaaattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 44492690 - 44492836
Alignment:
Q  29 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 127  Q
    |||||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  44492690 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattttc 44492787  T
Q  128 agaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44492788 agaaattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 23866518 - 23866680
Alignment:
Q  23 attacaaacagaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtc 120  Q
    |||||||| ||||||||||||| ||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||    
T  23866518 attacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtc 23866615  T
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23866616 aattt-caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 8727891 - 8727735
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||| ||||||||| |||||||||||||| || ||||  | ||| ||||||||||| |||| |||||||||||||||||| |||||||| |||| |||||    
T  8727891 acattacattacaa-cagaattaacatgatcaatacccatacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactat-gcaat 8727794  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 173  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  8727793 taggtcaattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 17054533 - 17054656
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  17054533 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-caggaattatagattatgattattgagagatag 17054629  T
Q  160 tctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||| |||||||||||    
T  17054630 tctcacccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 18614271 - 18614327
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 14056619 - 14056553
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||| |||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaa 14056553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 25111976 - 25112042
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||| |||| ||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaa 25112042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 27941012 - 27940840
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaat--ttattttccaaaagctattgca 112  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||||||||| ||||||||  | ||||  ||||||| ||| | | |||  |    
T  27941012 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaattcccaattcttatttttcaagaacaattcta 27940914  T
Q  113 attaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaat 187  Q
    || |   |||||||||||||| ||| ||||| || |||||  | ||| |||||||||||||||||||||||||||    
T  27940913 atca-aacaattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaat 27940840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 3e-50; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 18800334 - 18800503
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatt-tattttccaaaagctattgcaa 113  Q
    |||||||||||||| |||||||||||||| ||||||   |||||  ||||||||||||||| ||||||||||||||| |||||||||||| |||  ||||    
T  18800334 acatcacattacaa-cagaattaacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaa-gcaa 18800430  T
Q  114 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18800431 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacattagttttgcagaa 18800503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 32 - 186
Target Start/End: Complemental strand, 29614291 - 29614136
Alignment:
Q  32 agaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcag 129  Q
    ||||||||||||| ||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||| | |||  ||| |||| |||||||||||||||    
T  29614291 agaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattat-gcaactaggtcaattttcag 29614193  T
Q  130 aaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614192 aaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 29614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 10986339 - 10986170
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||    
T  10986339 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaat 10986242  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  10986241 taggtcaatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 4477754 - 4477912
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||| ||||||||| |||||||| ||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| |||||    
T  4477754 acattacattacaa-cagaattagcatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaat 4477851  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4477852 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 23839095 - 23839253
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| | |||||||||||||| |||||||||||||||||| |||||||  |||| |||||    
T  23839095 acattacattacaa-cagaattaacatgatcaatacccattccccttagaatcatcatcaaaccctaaccctcaatttatcttccaaacactat-gcaat 23839192  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23839193 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 23057850 - 23057993
Alignment:
Q  32 agaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcag 129  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  23057850 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcag 23057947  T
Q  130 aaattatagattatgattattgagagatagtctcacccttacctta 175  Q
     ||||||||||||||||||| |||||||||||||||||||||||||    
T  23057948 gaattatagattatgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 41 - 186
Target Start/End: Complemental strand, 930229 - 930085
Alignment:
Q  41 atgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattataga 139  Q
    |||| |||||||  ||||| |||||| ||||||||| ||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||| ||||||    
T  930229 atgatcattacccattcccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaa-ctata-caattaggtcaattttcagaaactataga 930132  T
Q  140 ttatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  930131 ttatgattattgagagatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 12168305 - 12168428
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12168305 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 12168401  T
Q  160 tctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||    
T  12168402 tctcacccttaccttagttttgcagaa 12168428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 19287214 - 19287337
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19287214 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 19287310  T
Q  160 tctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||    
T  19287311 tctcacccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 19785982 - 19785859
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| |||||||  ||| |||||||||||||| ||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  19785982 tcagaatcatcatcaaaccctaactttcattttattttccaaaa-ctatt-caactaggtcaattt-cagaaattatagattatgattattgagagatag 19785886  T
Q  160 tctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||    
T  19785885 tctcacccttaccttagttttgcagaa 19785859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 19878398 - 19878521
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19878398 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 19878494  T
Q  160 tctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||    
T  19878495 tctcacccttaccttagttttgcagaa 19878521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 19884174 - 19884297
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19884174 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 19884270  T
Q  160 tctcacccttaccttagttttgcagaa 186  Q
    ||||||||| |||||||||||||||||    
T  19884271 tctcaccctaaccttagttttgcagaa 19884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 34640069 - 34639986
Alignment:
Q  91 ttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34640069 ttattttccaaaa-ctatt-caattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 34646725 - 34646660
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34646725 caattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 24512899 - 24512833
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaa 24512833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 21565367 - 21565214
Alignment:
Q  19 tcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattag 117  Q
    ||||||||||| || ||||||||||| |||||||  ||||| | |||||||||||||| ||||||||||||||||  | |||  ||| |   ||||||||    
T  21565367 tcacattacaa-cataattaacatgatcattacccattccccttagaatcatcatcaaaccctaaccctcaattt--tatcctcaaggttaagcaattag 21565271  T
Q  118 gtcaattttcagaaattatagattatg-attattgagagatagtctcacccttacct 173  Q
    |||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  21565270 gtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 25469767 - 25469704
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25469767 caattaggtcaattt-cagaa-ttatagattatgattattgagagatagtctcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 173  Q
    |||||||||||||| |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 31252413 - 31252478
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||||||    
T  31252413 caattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 2286823 - 2286769
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 173  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 2286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  141 tatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 24441673 - 24441707
Alignment:
Q  141 tatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||| |||||||||||||||||||    
T  24441673 tatgattattgagagttagtctcacccttacctta 24441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 11288721 - 11288668
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| |||| ||| ||||| ||||| || ||||||||||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 11288668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 15458492 - 15458545
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15458545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 15465087 - 15465140
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15465140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 176
Target Start/End: Complemental strand, 28288537 - 28288509
Alignment:
Q  148 attgagagatagtctcacccttaccttag 176  Q
    |||||||||||||||||||||||||||||    
T  28288537 attgagagatagtctcacccttaccttag 28288509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 29415591 - 29415551
Alignment:
Q  141 tatgattattgagagatagtctcacccttaccttagttttg 181  Q
    ||||||||||||||| ||| ||||| |||||||||||||||    
T  29415591 tatgattattgagagttagcctcactcttaccttagttttg 29415551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 3e-50; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 20437182 - 20437024
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||| ||||||||| || ||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||    
T  20437182 acattacattacaa-cataattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaat 20437085  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20437084 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 41111977 - 41112100
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| |||||||  |||  ||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41111977 tcagaatcatcatcaaaccctaactttcatcttatttttcaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 41112073  T
Q  160 tctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||    
T  41112074 tctcacccttaccttagttttgcagaa 41112100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 173  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  145 attattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 175
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  145 attattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  141 tatgattattgagagatagtctcacccttacctt 174  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  141 tatgattattgagagatagtctcacccttacctt 174  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 10354 - 10195
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| |||||    
T  10354 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaat 10257  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10256 taggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 1684 - 1525
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| |||||    
T  1684 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaat 1587  T
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1586 taggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 1090 - 1240
Alignment:
Q  32 agaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcag 129  Q
    ||||||||||||| ||||||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |||    
T  1090 agaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cag 1186  T
Q  130 aaattatagattatgattattgagagatagtctcacccttaccttagttttgca 183  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1187 gaattatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 50091 - 50241
Alignment:
Q  32 agaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcag 129  Q
    ||||||||||||| ||||||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |||    
T  50091 agaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cag 50187  T
Q  130 aaattatagattatgattattgagagatagtctcacccttaccttagttttgca 183  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50188 gaattatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 8045955 - 8045822
Alignment:
Q  51 ccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattat 149  Q
    ||||||||| |||||||  || |||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  8045955 ccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagaaattatagattatgattat 8045859  T
Q  150 tgagagatagtctcacccttaccttagttttgcagaa 186  Q
     ||||||||||||||||||||||||||||||||||||    
T  8045858 cgagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 11848108 - 11848179
Alignment:
Q  115 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848108 taggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 53483646 - 53483760
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| ||||||   |||  ||||||| ||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  53483646 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactatt-caattaggtcaattt-caggaattatagattatgattattgagagatag 53483743  T
Q  160 tctcacccttaccttag 176  Q
    |||||||||||||||||    
T  53483744 tctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 15408139 - 15408205
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | |||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaa 15408205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 173  Q
    ||||||||||||||||| |||||||| |||||  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 170  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  140 ttatgattattgagagatagtctcacccttaccttagttttg 181  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 16146885 - 16146830
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16146885 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 27906266 - 27906321
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| |||||||| ||||| ||||| || |||||||| |||||    
T  27906266 aattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  145 attattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  145 attattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 14912081 - 14912138
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  14912081 tcaattttcagaagttatatattacaatcattgagagttagtctaacccttaccttag 14912138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 55 - 186
Target Start/End: Original strand, 30792 - 30923
Alignment:
Q  55 ttcccgtcagaatcatcatcaa-ccctaaccctcaattt-attttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattga 152  Q
    ||||| ||| |||||||||||| |||||| ||||||||| |  |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  30792 ttcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaaa-ctat-gcaattaggtcaattttcagaaattatagattatgattattga 30889  T
Q  153 gagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||||||||||||    
T  30890 gagatagtctcacccttaccttagttttgcagaa 30923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 186
Target Start/End: Complemental strand, 2040 - 1887
Alignment:
Q  32 agaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt-cag 129  Q
    ||||||||||| | |||||||  ||||  ||| |||||||||||| ||||||||||||| ||||||||||||| ||||  |||||||||||||||| |||    
T  2040 agaattaacataatcattacccattcca-tcaaaatcatcatcaaaccctaaccctcaaattattttccaaaa-ctata-caattaggtcaatttttcag 1944  T
Q  130 aaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1943 aaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 186
Target Start/End: Complemental strand, 8717 - 8564
Alignment:
Q  32 agaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt-cag 129  Q
    ||||||||||| | |||||||  ||||  ||| |||||||||||| ||||||||||||| ||||||||||||| ||||  |||||||||||||||| |||    
T  8717 agaattaacataatcattacccattcca-tcataatcatcatcaaaccctaaccctcaaattattttccaaaa-ctata-caattaggtcaatttttcag 8621  T
Q  130 aaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8620 aaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 1845 - 1727
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  1845 tcagaatcatcatcaaaccctaactttcatattattttccaaaa-ctatt-caattaggtcaattt-caggaattatagattatgattattgagagatag 1749  T
Q  160 tctcacccttaccttagttttg 181  Q
    ||||||||||||||||||||||    
T  1748 tctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 5868 - 5750
Alignment:
Q  61 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 159  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  5868 tcagaatcatcatcaaaccctaactttcatattattttccaaaa-ctatt-caattaggtcaattt-caggaattatagattatgattattgagagatag 5772  T
Q  160 tctcacccttaccttagttttg 181  Q
    ||||||||||||||||||||||    
T  5771 tctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 920 - 991
Alignment:
Q  109 tgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 180  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  920 tgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 8065 - 8136
Alignment:
Q  109 tgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 180  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8065 tgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  63 agaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 161  Q
    |||||||||||||| ||||||   |||  ||||||| ||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactatt-caattaggtcaattt-caggaattatagattatgattattgagagatagtc 45289  T
Q  162 tcacccttaccttagttttgc 182  Q
    ||||||||||||||| |||||    
T  45288 tcacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 40587 - 40521
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaa 40521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 3780 - 3624
Alignment:
Q  16 acatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaat 114  Q
    |||||||||||||| || ||||||||||| |||||||  | ||| |||||||||||||| |||||||||||||||||  || |||  ||| |   |||||    
T  3780 acatcacattacaa-cataattaacatgatcattacccatccccctcagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggttaagcaat 3684  T
Q  115 taggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 173  Q
    ||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  3683 taggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  141 tatgattattgagagatagtctcacccttacctt 174  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 17643 - 17710
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaa 186  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaa 17710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 135473 - 135539
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| |||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaa 135539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 3452 - 3295
Alignment:
Q  16 acatcacattacaaacagaattaacatgac-cattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaa 113  Q
    |||||||||||||| || |||||||||||  |||||||  ||||| |||||||||||||||| ||||||||||||||||  | |||  ||| |   ||||    
T  3452 acatcacattacaa-caaaattaacatgattcattacccattcccctcagaatcatcatcaaaccctaaccctcaattt--tatccccaaggttaagcaa 3356  T
Q  114 ttaggtcaattttcagaaattatagattatg-attattgagagatagtctcacccttacct 173  Q
    |||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  3355 ttaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 22646 - 22582
Alignment:
Q  122 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||| | |||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaa 22582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 35495 - 35438
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  35495 tcaattttcagaagttatacattacaatcattgagagttagtcttacccttaccttag 35438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  124 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||| |||| ||| |||||||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 717 - 780
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||| |||| ||| ||||| ||||| || ||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcagaa 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 1378 - 1441
Alignment:
Q  112 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  120 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 5480 - 5520
Alignment:
Q  147 tattgagagatagtctcacccttaccttagttttgcagaat 187  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  5480 tattgaaagatagtctcacccttaccttagttttgcagaat 5520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 179  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 493082 - 493019
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 185  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||  |||||||    
T  493082 aattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 5922 - 5857
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  5922 caattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 23624 - 23559
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||| |||||||| ||| | ||||| || ||||||||||||||  ||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcagaa 23559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 79545 - 79490
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  79545 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 79490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 721 - 676
Alignment:
Q  129 gaaattatagattatgattattgagagatagtctcacccttacctt 174  Q
    ||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  721 gaaattatacattaagatcattgagagttagtctcacccttacctt 676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 13947 - 13894
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 13894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 732 - 788
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||| |||||||    
T  732 tcaattttcagaagttatatattataatcattgagagttagcctcacccctacctta 788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 10605 - 10537
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatta 189  Q
    ||||||||||||||||| |||| ||| ||||| ||||| || ||| ||||||||||  || ||||||||    
T  10605 aattttcagaaattatacattaagatcattgaaagataatcccacacttaccttagaattccagaatta 10537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 11630 - 11681
Alignment:
Q  126 tcagaaattataga--ttatgattattgagagatagtctcacccttacctta 175  Q
    |||||||||||| |  |||| ||||||||||| |||||||||||||||||||    
T  11630 tcagaaattatataatttataattattgagagttagtctcacccttacctta 11681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 73285 - 73337
Alignment:
Q  121 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 173  Q
    |||||||| |||||||| |||||||| ||||| ||||| || |||||||||||    
T  73285 aattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 121902 - 121958
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  121902 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 121958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 132778 - 132834
Alignment:
Q  119 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  132778 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 132834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 69749 - 69801
Alignment:
Q  123 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 175  Q
    |||||| |||||||| |||| ||| ||||| || |||||||||||||||||||    
T  69749 ttttcataaattatatattaagatcattgaaagttagtctcacccttacctta 69801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University