View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8180A_low_356 (Length: 208)
Name: NF8180A_low_356
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8180A_low_356 |
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Alignment Details
Target: chr7 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 23 - 187
Target Start/End: Complemental strand, 47137284 - 47137120
Alignment:
| Q |
23 |
gtatggtggtgactaaatttcatgtggattgctttgatcagggtctatgcaccggtgtggttattttgtggataagtggtggtaaaagctcgcatctact |
122 |
Q |
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| T |
47137284 |
gtatggtggtgactaaatttcatgtggattgctttgatcagggtctatgcaccggtgtggttattttgtggataagtggtggtaaaagctcgcatctact |
47137185 |
T |
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| Q |
123 |
agtttttagtgaagatcnnnnnnnnatatatcttctacctcccatcatctttaatgccgggtaat |
187 |
Q |
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| T |
47137184 |
agtttttagtgaagatcttttttttatatatcttctacctcccatcatctttaatgccgggtaat |
47137120 |
T |
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