View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8180A_low_40 (Length: 396)

Name: NF8180A_low_40
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8180A_low_40
NF8180A_low_40
[»] chr6 (25 HSPs)
chr6 (196-396)||(16566324-16566524)
chr6 (196-396)||(188981-189181)
chr6 (196-396)||(17684473-17684673)
chr6 (196-396)||(17691444-17691644)
chr6 (196-396)||(25537163-25537363)
chr6 (196-396)||(11651726-11651926)
chr6 (196-396)||(29308893-29309093)
chr6 (196-396)||(29315853-29316053)
chr6 (196-396)||(27381256-27381456)
chr6 (196-396)||(27471639-27471839)
chr6 (196-396)||(13359273-13359473)
chr6 (232-396)||(20553591-20553755)
chr6 (212-386)||(8509941-8510116)
chr6 (231-396)||(17850499-17850663)
chr6 (216-396)||(27925772-27925957)
chr6 (8-95)||(10623387-10623474)
chr6 (200-255)||(31258065-31258120)
chr6 (99-145)||(11651630-11651676)
chr6 (99-133)||(25537427-25537461)
chr6 (99-145)||(27381505-27381551)
chr6 (99-145)||(27471888-27471934)
chr6 (101-145)||(17691693-17691737)
chr6 (99-134)||(29308798-29308833)
chr6 (99-134)||(29315758-29315793)
chr6 (231-308)||(28605854-28605931)
[»] scaffold0234 (4 HSPs)
scaffold0234 (196-396)||(2325-2525)
scaffold0234 (196-396)||(11216-11416)
scaffold0234 (99-145)||(2574-2620)
scaffold0234 (99-145)||(11465-11511)
[»] scaffold0063 (1 HSPs)
scaffold0063 (196-396)||(5532-5732)
[»] chr4 (36 HSPs)
chr4 (196-396)||(4426608-4426807)
chr4 (196-396)||(5707323-5707523)
chr4 (196-396)||(19926764-19926964)
chr4 (196-396)||(5713951-5714151)
chr4 (196-396)||(26970466-26970666)
chr4 (196-396)||(28393138-28393338)
chr4 (196-396)||(55612686-55612886)
chr4 (199-396)||(868603-868800)
chr4 (196-396)||(18262215-18262415)
chr4 (196-396)||(26963643-26963843)
chr4 (205-396)||(8845215-8845406)
chr4 (205-396)||(8858179-8858370)
chr4 (196-396)||(10621337-10621537)
chr4 (196-396)||(10628416-10628616)
chr4 (213-396)||(18269093-18269276)
chr4 (196-308)||(12357139-12357251)
chr4 (201-392)||(20311299-20311491)
chr4 (199-396)||(10677559-10677753)
chr4 (199-396)||(10891199-10891393)
chr4 (199-393)||(35223576-35223760)
chr4 (199-393)||(5668132-5668327)
chr4 (196-338)||(5616216-5616358)
chr4 (219-392)||(21454145-21454319)
chr4 (242-309)||(39074278-39074346)
chr4 (99-145)||(5707228-5707274)
chr4 (99-145)||(5713856-5713902)
chr4 (99-145)||(19927013-19927059)
chr4 (99-145)||(26963548-26963594)
chr4 (99-145)||(26970371-26970417)
chr4 (97-134)||(10628676-10628713)
chr4 (98-134)||(12357043-12357079)
chr4 (99-146)||(4426856-4426903)
chr4 (99-134)||(10621597-10621632)
chr4 (99-134)||(28393399-28393434)
chr4 (330-389)||(39074211-39074270)
chr4 (101-145)||(868507-868551)
[»] chr3 (46 HSPs)
chr3 (196-396)||(13211305-13211505)
chr3 (196-396)||(18522666-18522866)
chr3 (199-396)||(17781122-17781319)
chr3 (196-396)||(6110067-6110267)
chr3 (196-396)||(10572596-10572796)
chr3 (196-396)||(16482487-16482687)
chr3 (196-396)||(18519981-18520178)
chr3 (199-396)||(10579359-10579556)
chr3 (199-396)||(15600888-15601085)
chr3 (199-396)||(15607433-15607630)
chr3 (196-396)||(17200188-17200388)
chr3 (199-396)||(19089749-19089946)
chr3 (196-396)||(13248610-13248810)
chr3 (196-396)||(13516814-13517014)
chr3 (199-396)||(15357590-15357787)
chr3 (199-394)||(32056906-32057101)
chr3 (196-379)||(8490491-8490674)
chr3 (212-396)||(15342223-15342407)
chr3 (199-396)||(1647525-1647726)
chr3 (196-354)||(18640792-18640950)
chr3 (199-392)||(29924977-29925170)
chr3 (199-392)||(29974130-29974323)
chr3 (213-381)||(16200145-16200313)
chr3 (213-381)||(16200451-16200619)
chr3 (200-394)||(24253394-24253589)
chr3 (299-396)||(17136465-17136562)
chr3 (7-94)||(52969351-52969438)
chr3 (38-95)||(13268023-13268080)
chr3 (196-257)||(18534759-18534820)
chr3 (7-95)||(6144913-6145001)
chr3 (19-95)||(26755391-26755467)
chr3 (196-240)||(18510925-18510969)
chr3 (97-145)||(17136135-17136183)
chr3 (99-145)||(6109972-6110018)
chr3 (99-145)||(8490396-8490442)
chr3 (99-145)||(13248515-13248561)
chr3 (99-145)||(18640999-18641045)
chr3 (99-143)||(13211211-13211255)
chr3 (99-143)||(17781370-17781414)
chr3 (99-143)||(19089997-19090041)
chr3 (99-134)||(10579618-10579653)
chr3 (99-145)||(13516719-13516765)
chr3 (99-145)||(17200437-17200483)
chr3 (97-143)||(18519883-18519929)
chr3 (99-131)||(15601152-15601184)
chr3 (99-131)||(15607697-15607729)
[»] chr1 (25 HSPs)
chr1 (196-396)||(18252033-18252233)
chr1 (196-396)||(21171237-21171437)
chr1 (196-396)||(27131413-27131613)
chr1 (196-396)||(27310581-27310781)
chr1 (196-396)||(16359039-16359239)
chr1 (196-396)||(18532518-18532718)
chr1 (199-396)||(36816637-36816834)
chr1 (196-396)||(3855923-3856123)
chr1 (199-396)||(22657225-22657423)
chr1 (7-95)||(33804985-33805073)
chr1 (199-393)||(27277564-27277756)
chr1 (7-95)||(44709996-44710084)
chr1 (17-95)||(50518050-50518128)
chr1 (227-392)||(12014292-12014457)
chr1 (7-95)||(45907747-45907835)
chr1 (227-340)||(12006599-12006712)
chr1 (17-95)||(12864691-12864768)
chr1 (205-391)||(9917927-9918106)
chr1 (99-145)||(18251936-18251982)
chr1 (99-145)||(18532767-18532813)
chr1 (99-145)||(27310831-27310877)
chr1 (199-268)||(30720625-30720694)
chr1 (223-295)||(3403248-3403320)
chr1 (223-295)||(3443499-3443571)
chr1 (99-134)||(16359301-16359336)
[»] chr8 (21 HSPs)
chr8 (199-396)||(24642655-24642852)
chr8 (198-396)||(21940670-21940868)
chr8 (199-392)||(6094129-6094322)
chr8 (196-394)||(28554886-28555084)
chr8 (196-396)||(22171492-22171690)
chr8 (199-326)||(24636860-24636987)
chr8 (7-91)||(9138514-9138598)
chr8 (7-95)||(23256409-23256497)
chr8 (205-396)||(38232381-38232570)
chr8 (18-95)||(757556-757633)
chr8 (214-392)||(2375027-2375203)
chr8 (17-95)||(14825347-14825425)
chr8 (231-294)||(10920234-10920297)
chr8 (223-293)||(32872948-32873019)
chr8 (99-145)||(6094031-6094077)
chr8 (99-145)||(24642556-24642602)
chr8 (99-143)||(22070108-22070152)
chr8 (297-345)||(30200270-30200318)
chr8 (52-91)||(16668577-16668616)
chr8 (99-134)||(21940573-21940608)
chr8 (99-134)||(22171396-22171431)
[»] chr7 (26 HSPs)
chr7 (196-396)||(15152446-15152646)
chr7 (196-396)||(29327787-29327987)
chr7 (196-396)||(11536066-11536266)
chr7 (196-396)||(18561010-18561210)
chr7 (198-396)||(11542984-11543182)
chr7 (196-396)||(12750829-12751029)
chr7 (196-396)||(15148145-15148345)
chr7 (199-396)||(12738542-12738739)
chr7 (196-392)||(18257850-18258046)
chr7 (7-95)||(19220290-19220378)
chr7 (215-396)||(2364917-2365097)
chr7 (199-381)||(13392157-13392338)
chr7 (7-95)||(41254183-41254271)
chr7 (226-386)||(7396221-7396382)
chr7 (199-286)||(39111819-39111905)
chr7 (8-95)||(15893643-15893730)
chr7 (38-95)||(23291984-23292041)
chr7 (267-328)||(3132748-3132809)
chr7 (99-145)||(12738443-12738489)
chr7 (243-308)||(10234179-10234244)
chr7 (99-143)||(15152350-15152394)
chr7 (99-143)||(29327690-29327734)
chr7 (99-134)||(2653296-2653331)
chr7 (99-134)||(11543244-11543279)
chr7 (99-145)||(12750733-12750779)
chr7 (98-131)||(15148048-15148081)
[»] chr5 (26 HSPs)
chr5 (196-396)||(24695470-24695670)
chr5 (199-396)||(18569867-18570064)
chr5 (196-396)||(19714502-19714702)
chr5 (199-396)||(19707222-19707419)
chr5 (199-393)||(22547023-22547217)
chr5 (198-387)||(27347491-27347679)
chr5 (7-95)||(25763376-25763464)
chr5 (7-95)||(23350357-23350445)
chr5 (197-378)||(17285754-17285935)
chr5 (199-295)||(39537968-39538064)
chr5 (259-396)||(18807038-18807175)
chr5 (197-378)||(17298907-17299088)
chr5 (7-91)||(20231494-20231578)
chr5 (7-95)||(34827537-34827624)
chr5 (199-330)||(31886537-31886668)
chr5 (306-396)||(39538701-39538791)
chr5 (45-91)||(13849096-13849142)
chr5 (99-145)||(27347732-27347778)
chr5 (99-145)||(19707472-19707518)
chr5 (99-145)||(19714752-19714798)
chr5 (99-145)||(24695719-24695765)
chr5 (219-309)||(33477389-33477479)
chr5 (8-91)||(16491105-16491188)
chr5 (98-133)||(39537869-39537904)
chr5 (53-91)||(31056776-31056814)
chr5 (243-318)||(11479420-11479496)
[»] chr2 (13 HSPs)
chr2 (199-396)||(21330252-21330449)
chr2 (212-396)||(18796525-18796709)
chr2 (200-391)||(18619812-18620002)
chr2 (199-338)||(19692598-19692737)
chr2 (258-393)||(20977957-20978092)
chr2 (7-95)||(29811423-29811511)
chr2 (7-95)||(30215150-30215238)
chr2 (227-396)||(36270199-36270369)
chr2 (227-385)||(18822115-18822275)
chr2 (229-384)||(36802664-36802820)
chr2 (235-386)||(24471642-24471792)
chr2 (99-145)||(21330503-21330549)
chr2 (26-91)||(26269038-26269103)
[»] scaffold0390 (4 HSPs)
scaffold0390 (196-396)||(6938-7138)
scaffold0390 (196-396)||(13954-14154)
scaffold0390 (99-143)||(7189-7233)
scaffold0390 (99-143)||(14205-14249)
[»] scaffold0433 (2 HSPs)
scaffold0433 (200-396)||(7114-7310)
scaffold0433 (99-145)||(7015-7061)
[»] scaffold0220 (2 HSPs)
scaffold0220 (196-396)||(18291-18491)
scaffold0220 (99-145)||(18196-18242)
[»] scaffold0186 (2 HSPs)
scaffold0186 (199-396)||(25994-26191)
scaffold0186 (99-145)||(26240-26286)
[»] scaffold0657 (2 HSPs)
scaffold0657 (199-396)||(999-1196)
scaffold0657 (99-145)||(901-947)
[»] scaffold0008 (1 HSPs)
scaffold0008 (196-372)||(230369-230544)
[»] scaffold0176 (3 HSPs)
scaffold0176 (199-257)||(8446-8504)
scaffold0176 (99-134)||(8567-8602)
scaffold0176 (44-91)||(26176-26223)
[»] scaffold0326 (1 HSPs)
scaffold0326 (99-145)||(16523-16569)
[»] scaffold0203 (1 HSPs)
scaffold0203 (99-145)||(23779-23825)
[»] scaffold0767 (1 HSPs)
scaffold0767 (99-134)||(2-37)
[»] scaffold0565 (1 HSPs)
scaffold0565 (212-243)||(10127-10158)
[»] scaffold0032 (1 HSPs)
scaffold0032 (222-344)||(92194-92317)


Alignment Details
Target: chr6 (Bit Score: 177; Significance: 3e-95; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 16566524 - 16566324
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566524 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 16566425  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  16566424 ccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 16566325  T
Q  396 a 396  Q
    |    
T  16566324 a 16566324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 189181 - 188981
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189181 aggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 189082  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  189081 ccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagactg 188982  T
Q  396 a 396  Q
    |    
T  188981 a 188981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 17684673 - 17684473
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684673 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 17684574  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  ||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  17684573 ccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 17684474  T
Q  396 a 396  Q
    |    
T  17684473 a 17684473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 17691644 - 17691444
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691644 aggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 17691545  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  17691544 ccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtagactg 17691445  T
Q  396 a 396  Q
    |    
T  17691444 a 17691444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 25537363 - 25537163
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  25537363 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagacc 25537264  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  25537263 ccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagactg 25537164  T
Q  396 a 396  Q
    |    
T  25537163 a 25537163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 11651726 - 11651926
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651726 aggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 11651825  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||| ||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  11651826 ccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagactg 11651925  T
Q  396 a 396  Q
    |    
T  11651926 a 11651926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 29308893 - 29309093
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  29308893 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagagc 29308992  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  29308993 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 29309092  T
Q  396 a 396  Q
    |    
T  29309093 a 29309093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 29315853 - 29316053
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  29315853 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagagc 29315952  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  29315953 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 29316052  T
Q  396 a 396  Q
    |    
T  29316053 a 29316053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 27381456 - 27381256
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381456 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 27381357  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||| ||||| |||||| ||||||||| |||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  27381356 ccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 27381257  T
Q  396 a 396  Q
    |    
T  27381256 a 27381256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 27471839 - 27471639
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471839 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 27471740  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||| ||||| |||||| ||||||||| |||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  27471739 ccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 27471640  T
Q  396 a 396  Q
    |    
T  27471639 a 27471639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 13359473 - 13359273
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||     
T  13359473 aggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaact 13359374  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||  | |||||| ||||||||||||||||||| ||||||||  || || || | ||||||||| || |||||||||| ||| |||||||    
T  13359373 ccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattatatggatagactg 13359274  T
Q  396 a 396  Q
    |    
T  13359273 a 13359273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 396
Target Start/End: Complemental strand, 20553755 - 20553591
Alignment:
Q  232 aataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtatccg 331  Q
    ||||||||| |||| |||| |||||||||||||| || ||||||||  ||||||| |||||| ||| ||||| ||||| | ||||||||||||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  332 tagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    |||| ||  |||||||  ||||||||||  ||||||||||| ||| | |||||| ||||||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagactga 20553591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 386
Target Start/End: Original strand, 8509941 - 8510116
Alignment:
Q  212 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccgttaaacataagg 310  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  ||| ||||||||||| |||  |||||||| ||||| |||| ||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  311 aaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtg 386  Q
    |   |||| |||||||||  ||||| ||||||||||   || ||||||| ||||||| |||| |||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgtg 8510116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 396
Target Start/End: Complemental strand, 17850663 - 17850499
Alignment:
Q  231 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtatcc 330  Q
    |||||||||||||| ||||| ||||  ||||  |||||||||| |||  |||||||||||| | ||  ||||| | ||||| | |||||||||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  331 gtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
     |||||||||||| |||  |||| | ||| |||| ||| |||||||||||||| ||||||||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagactga 17850499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 396
Target Start/End: Original strand, 27925772 - 27925957
Alignment:
Q  216 tgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacat---taagtata--acttaattgtgagaccccgttaaacataagg 310  Q
    |||||||||||||||||||||||||| |||||||  ||||  |||||| |||||||   ||||| |   ||||||| ||||||| || ||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  311 aaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    |||||||||||||||||||  ||||||| |||||||   |||||  ||| |||| ||||| | |||||||||||||| || |||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtggataaactga 27925957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 10623474 - 10623387
Alignment:
Q  8 agataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    |||| ||| ||||||||||||||||||   |  ||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  10623474 agattataatgagctaagtcgggcggcgagtgtagcggtgatagaagatgacgaataattgtacattattgaaaatcttgatcccgat 10623387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  200 atttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagt 255  Q
    |||||||||| | |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 11651630 - 11651676
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  11651630 tgttggagtaagccctaatagccaatctatattgattgagtttggct 11651676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 133
Target Start/End: Complemental strand, 25537461 - 25537427
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattga 133  Q
    |||||||||||||||||||||||||||||||||||    
T  25537461 tgttggattaagccctaatagccaatctatattga 25537427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 27381551 - 27381505
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggct 27381505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 27471934 - 27471888
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggct 27471888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 17691737 - 17691693
Alignment:
Q  101 ttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggct 17691693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 29308798 - 29308833
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgat 29308833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 29315758 - 29315793
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgat 29315793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 28605854 - 28605931
Alignment:
Q  231 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataa 308  Q
    |||||||||  |||||||||||| |  ||||||||| || |||||| | ||| |||||||||||| ||||||| ||||    
T  28605854 taataaagtatctagaatagttattttgtttaatgggactttaagtgtgactaaattgtgagacctcgttaaagataa 28605931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 169; Significance: 2e-90; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 2525 - 2325
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2525 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 2426  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  2425 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 2326  T
Q  396 a 396  Q
    |    
T  2325 a 2325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 11416 - 11216
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11416 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 11317  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  11316 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 11217  T
Q  396 a 396  Q
    |    
T  11216 a 11216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 2620 - 2574
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggct 2574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 11511 - 11465
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggct 11465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 169; Significance: 2e-90; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 5532 - 5732
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5532 aggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 5631  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  5632 ccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagactg 5731  T
Q  396 a 396  Q
    |    
T  5732 a 5732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 2e-90; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 4426807 - 4426608
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4426807 aggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 4426708  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  4426707 ccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactg 4426609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 5707323 - 5707523
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707323 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacc 5707422  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||    
T  5707423 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 5707522  T
Q  396 a 396  Q
    |    
T  5707523 a 5707523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 19926964 - 19926764
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926964 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 19926865  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  19926864 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 19926765  T
Q  396 a 396  Q
    |    
T  19926764 a 19926764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 5713951 - 5714151
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  5713951 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgagacc 5714050  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||    
T  5714051 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 5714150  T
Q  396 a 396  Q
    |    
T  5714151 a 5714151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 26970466 - 26970666
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970466 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 26970565  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  26970566 ccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 26970665  T
Q  396 a 396  Q
    |    
T  26970666 a 26970666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 28393338 - 28393138
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28393338 aggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 28393239  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  28393238 ccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactg 28393139  T
Q  396 a 396  Q
    |    
T  28393138 a 28393138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 55612686 - 55612886
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612686 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 55612785  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  55612786 ccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 55612885  T
Q  396 a 396  Q
    |    
T  55612886 a 55612886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 199 - 396
Target Start/End: Original strand, 868603 - 868800
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  868603 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccg 868702  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  868703 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 868800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 18262215 - 18262415
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262215 aggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 18262314  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  ||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  18262315 ccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 18262414  T
Q  396 a 396  Q
    |    
T  18262415 a 18262415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 26963643 - 26963843
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26963643 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgagacc 26963742  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  26963743 ccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 26963842  T
Q  396 a 396  Q
    |    
T  26963843 a 26963843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 205 - 396
Target Start/End: Original strand, 8845215 - 8845406
Alignment:
Q  205 tttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaac 304  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  305 ataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||||||||| ||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctga 8845406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 205 - 396
Target Start/End: Original strand, 8858179 - 8858370
Alignment:
Q  205 tttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaac 304  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  305 ataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||||||||| ||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctga 8858370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 10621537 - 10621337
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10621537 aggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgagagc 10621438  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  10621437 ccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 10621338  T
Q  396 a 396  Q
    |    
T  10621337 a 10621337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 10628616 - 10628416
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10628616 aggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgagagc 10628517  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||| |||||||||    
T  10628516 ccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtagactg 10628417  T
Q  396 a 396  Q
    |    
T  10628416 a 10628416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 213 - 396
Target Start/End: Original strand, 18269093 - 18269276
Alignment:
Q  213 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaa 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269093 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaa 18269192  T
Q  313 attattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    | |||||| ||||||||||||||||||||||  ||| ||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  18269193 actattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 18269276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 196 - 308
Target Start/End: Original strand, 12357139 - 12357251
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357139 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 12357238  T
Q  296 ccgttaaacataa 308  Q
    || ||||||||||    
T  12357239 ccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 392
Target Start/End: Original strand, 20311299 - 20311491
Alignment:
Q  201 tttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaag-tataacttaattgtgagaccccgt 299  Q
    ||||||||| ||||||||||||||| ||||||||||||| | || |||||||| |  ||| |||||| ||||||| |||||||||||||||||||||| |    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  300 taaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    |||||||||||| | | || |||||||||  || ||||||||||||||  ||||||||||||||||||||||| |||||||| ||||||||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtaga 20311491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 10677753 - 10677559
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||| ||||| |||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| |||     
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||  || || |||||||||||||||||||||||||||||||| |||||  ||||||| |||||||| |||||||||||||||||||||||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctttagtgaaa--tgagataacattaaagtatatagactattatgtgggtagactga 10677559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 10891393 - 10891199
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||| ||||| |||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| |||     
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||  || || |||||||||||||||||||||||||||||||| |||||  ||||||| |||||||| |||||||||||||||||||||||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctttagtgaaa--tgagataacattaaagtatatagactattatgtgggtagactga 10891199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 199 - 393
Target Start/End: Original strand, 35223576 - 35223760
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||||||          ||    
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat----------cg 35223665  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    | ||||  ||||| |||||||||||||||| |||||||||||||||||| |||    |||| |||||||||||||||||||||||||||||||||    
T  35223666 taaaacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagac 35223760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 5668327 - 5668132
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |||||||| | | ||||| |||||| |||     
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  299 ttaaacataaggaaattattcttaaag--tatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||   ||||| |||||||||||||  |||  |||||||||||||||||  ||  |||||| ||||||| |||| |||||||||||||| |||||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgtggatagac 5668132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 5616216 - 5616358
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||  |||||||||||||||||||||||||||| |||| |||| ||||||  |||  ||||||||||||| | ||| |||  ||||| |    
T  5616216 aggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagatc 5616315  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaa 338  Q
    |||||||||   |||| |||||||||||||||||||| |||||    
T  5616316 ccgttaaactagaggacattattcttaaagtatccgttgtcaa 5616358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 392
Target Start/End: Complemental strand, 21454319 - 21454145
Alignment:
Q  219 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt-aagtataacttaattgtgagaccccgttaaacataaggaaattat 317  Q
    ||||||||||| ||||||||| | |||||||||||||  | ||||||||||||| || | | |||||||  ||||||||| ||||  |||| || |||||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  318 tcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    | ||||| ||||  ||||||| ||||||||  || ||||||| || ||| ||||| ||| ||||||||| |||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgtgagtaga 21454145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  242 ctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataag 309  Q
    |||||||| ||||||||||||| | ||||||||||||| |||||||  ||||||||| |||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 5707228 - 5707274
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  5707228 tgttggaataagccctaatagccaatctatattgattgtgtttggct 5707274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 5713856 - 5713902
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggct 5713902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 19927059 - 19927013
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  19927059 tgttggaataagccctaatagccaatctatattgattgggtttggct 19927013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 26963548 - 26963594
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggct 26963594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 26970371 - 26970417
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggct 26970417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 10628713 - 10628676
Alignment:
Q  97 agtgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  10628713 agtgttggaataagccctaatagccaatctatattgat 10628676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 12357043 - 12357079
Alignment:
Q  98 gtgttggattaagccctaatagccaatctatattgat 134  Q
    |||||||| ||||||||||||||||||||||||||||    
T  12357043 gtgttggaataagccctaatagccaatctatattgat 12357079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 4426903 - 4426856
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggctc 146  Q
    ||||||| |||| ||||||||||||||||||||||| | |||||||||    
T  4426903 tgttggagtaagtcctaatagccaatctatattgattgggtttggctc 4426856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 10621632 - 10621597
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgat 10621597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 28393434 - 28393399
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  28393434 tgttggagtaagccctaatagccaatctatattgat 28393399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 39074270 - 39074211
Alignment:
Q  330 cgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggt 389  Q
    ||||||||  ||||||||  ||||||||||||||||||||||  ||||||||| ||||||    
T  39074270 cgtagtcatactttattgtgaagtgagatatcattaaagcatggagactattacgtgggt 39074211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 868507 - 868551
Alignment:
Q  101 ttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||| ||| |||||||||||||||||||||||| | ||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggct 868551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 169; Significance: 2e-90; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 13211305 - 13211505
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 13211504  T
Q  396 a 396  Q
    |    
T  13211505 a 13211505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 18522666 - 18522866
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522666 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 18522765  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||||||| |||||||||    
T  18522766 ccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagactg 18522865  T
Q  396 a 396  Q
    |    
T  18522866 a 18522866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 17781319 - 17781122
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 17781122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 6110067 - 6110267
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110067 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 6110166  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  6110167 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 6110266  T
Q  396 a 396  Q
    |    
T  6110267 a 6110267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 10572796 - 10572596
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572796 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 10572697  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  10572696 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 10572597  T
Q  396 a 396  Q
    |    
T  10572596 a 10572596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 16482687 - 16482487
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482687 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 16482588  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  16482587 ccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 16482488  T
Q  396 a 396  Q
    |    
T  16482487 a 16482487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 18519981 - 18520178
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18519981 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 18520080  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    |||||||||||||||||| |||||||||   |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  18520081 ccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 18520177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 10579556 - 10579359
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactga 10579359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 15601085 - 15600888
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15601085 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 15600986  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  15600985 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 15600888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 15607630 - 15607433
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15607630 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 15607531  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  15607530 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 15607433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 17200388 - 17200188
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17200388 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatacc 17200289  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || |||||||||| |||| ||||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||||    
T  17200288 cctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagactg 17200189  T
Q  396 a 396  Q
    |    
T  17200188 a 17200188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 19089946 - 19089749
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||| ||||||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagactga 19089749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 13248610 - 13248810
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248610 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13248709  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| ||||||| |||||||||||||| |||| ||||| |||| |||||||||||| |||||||||||| |||||||||    
T  13248710 ccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtagactg 13248809  T
Q  396 a 396  Q
    |    
T  13248810 a 13248810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 13516814 - 13517014
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  13516814 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagacc 13516913  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||  ||||||||||||||| | ||||||||||||||||||||||    
T  13516914 ccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagactg 13517013  T
Q  396 a 396  Q
    |    
T  13517014 a 13517014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 15357787 - 15357590
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15357787 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 15357688  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||| ||||||||||    
T  15357687 ttaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagactga 15357590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 199 - 394
Target Start/End: Complemental strand, 32057101 - 32056906
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||    
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagact 394  Q
    |||||||||| |||| |||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 32056906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 196 - 379
Target Start/End: Original strand, 8490491 - 8490674
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8490491 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 8490590  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagacta 379  Q
    || ||||||||||||||| |||||| |||||||| ||||||||||||| |||| ||||| ||||||||||||||||| ||||||    
T  8490591 ccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagacta 8490674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 212 - 396
Target Start/End: Complemental strand, 15342407 - 15342223
Alignment:
Q  212 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataagga 311  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  312 aattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    |  |||||| ||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||| ||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagactga 15342223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 1647726 - 1647525
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataa----cttaattgtgagac 294  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    ||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  295 cccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagact 394  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||  | ||||| ||||||||||| |||||||||||||| ||||||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagact 1647527  T
Q  395 ga 396  Q
    ||    
T  1647526 ga 1647525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 196 - 354
Target Start/End: Complemental strand, 18640950 - 18640792
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18640950 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacc 18640851  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtg 354  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  18640850 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 199 - 392
Target Start/End: Original strand, 29924977 - 29925170
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||||||||     
T  29924977 catttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgagacccca 29925076  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    ||||| ||||||| |||||||||||| |||  |||||||||||||||||  ||||||||||||||||||||||  || ||||||||||| ||||    
T  29925077 ttaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgtggataga 29925170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 199 - 392
Target Start/End: Original strand, 29974130 - 29974323
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||||||||     
T  29974130 catttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgagacccca 29974229  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    ||||| ||||||| |||||||||||| |||  |||||||||||||||||  ||||||||||||||||||||||  || ||||||||||| ||||    
T  29974230 ttaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgtggataga 29974323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 213 - 381
Target Start/End: Original strand, 16200145 - 16200313
Alignment:
Q  213 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaa 312  Q
    |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||     
T  16200145 ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagaccccattaaacataaggac 16200244  T
Q  313 attattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactatt 381  Q
    |||||||||||||||| |||||||||| |||||||  ||||| ||||||||||||||||  ||||||||    
T  16200245 attattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 213 - 381
Target Start/End: Original strand, 16200451 - 16200619
Alignment:
Q  213 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaa 312  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||     
T  16200451 ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagactccaataaacataaggac 16200550  T
Q  313 attattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactatt 381  Q
    |||||||||||||||| |||||||||| |||||||  ||||| ||| ||||||||||||  ||||||||    
T  16200551 attattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 200 - 394
Target Start/End: Complemental strand, 24253589 - 24253394
Alignment:
Q  200 atttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccg 298  Q
    |||||||||| |||||||||||  |||||||||||||||||| |||||||| | || ||||| |||||||||||||||| ||||||| |||||| ||||     
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagact 394  Q
    | ||||||||||| | ||||||||||||||  || |||||  ||||||| |||||||| || |||||||||||| |||||||||||| ||||||||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagact 24253394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 299 - 396
Target Start/End: Original strand, 17136465 - 17136562
Alignment:
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||||||||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagactga 17136562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 52969438 - 52969351
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccga 94  Q
    ||||| ||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52969438 tagattataatgagctaagtcgggcggcgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccga 52969351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 13268023 - 13268080
Alignment:
Q  38 tcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13268023 tcaagcggtggtagaagatgatgaagaatagtacattattgaaaatcttgatcccgat 13268080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 18534759 - 18534820
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 257  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534759 aggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 6145001 - 6144913
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| ||| ||||||||||||| ||   | |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  6145001 tagattataatgagctaagtcggacgaggggtcaagcggtgatagaagatgatgaagaatagtacattattgaaaatcttgatcccgat 6144913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 26755467 - 26755391
Alignment:
Q  19 agctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    |||||||||||||||| | |  ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26755467 agctaagtcgggcggccggtgtagcggtgatagaagatgacgaagaattgtacattattgaaaatcttgatcccgat 26755391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 18510925 - 18510969
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtc 240  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  18510925 aggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 17136135 - 17136183
Alignment:
Q  97 agtgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  17136135 agtgttggagtaagccctaatagccaatctatattgattgagtttggct 17136183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 6109972 - 6110018
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggct 6110018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 8490396 - 8490442
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  8490396 tgttggaataagccctaatagccaatctatattgattgggtttggct 8490442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 13248515 - 13248561
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggct 13248561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 18641045 - 18640999
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  18641045 tgttggaataagccctaatagccaatctatattgattgtgtttggct 18640999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 13211211 - 13211255
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttgg 13211255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 17781414 - 17781370
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  17781414 tgttggagtaagccctaatagccaatctatattgattgagtttgg 17781370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 19090041 - 19089997
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  19090041 tgttggagtaagccctaatagccaatctatattgattgagtttgg 19089997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 10579653 - 10579618
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  10579653 tgttggaataagccctaatagccaatctatattgat 10579618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 13516719 - 13516765
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||| ||||| | ||||||||    
T  13516719 tgttggagtaagccctaatagccaatctatgttgattgagtttggct 13516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 17200483 - 17200437
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||| ||||| | ||||||||    
T  17200483 tgttggagtaagccctaatagccaatctatgttgattgggtttggct 17200437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 18519883 - 18519929
Alignment:
Q  97 agtgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||||| |||| ||||||||||||||||||||||| | ||||||    
T  18519883 agtgttggagtaagtcctaatagccaatctatattgattgggtttgg 18519929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 15601184 - 15601152
Alignment:
Q  99 tgttggattaagccctaatagccaatctatatt 131  Q
    ||||||| |||||||||||||||||||||||||    
T  15601184 tgttggaataagccctaatagccaatctatatt 15601152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 15607729 - 15607697
Alignment:
Q  99 tgttggattaagccctaatagccaatctatatt 131  Q
    ||||||| |||||||||||||||||||||||||    
T  15607729 tgttggaataagccctaatagccaatctatatt 15607697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 2e-90; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 18252033 - 18252233
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252033 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 18252132  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  18252133 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 18252232  T
Q  396 a 396  Q
    |    
T  18252233 a 18252233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 21171437 - 21171237
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  21171437 aggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagacc 21171338  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  21171337 ccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagactg 21171238  T
Q  396 a 396  Q
    |    
T  21171237 a 21171237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 27131613 - 27131413
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131613 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 27131514  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| |||||||  |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  27131513 ccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagactg 27131414  T
Q  396 a 396  Q
    |    
T  27131413 a 27131413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 27310781 - 27310581
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310781 aggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 27310682  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
     |||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||||  |||||||||||||||| ||||||||||||||||||||||    
T  27310681 acgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagactg 27310582  T
Q  396 a 396  Q
    |    
T  27310581 a 27310581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 16359239 - 16359039
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  16359239 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagacc 16359140  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||||||||| || ||  |||||||||||||||| ||||||||||||||||||||||    
T  16359139 ccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagactg 16359040  T
Q  396 a 396  Q
    |    
T  16359039 a 16359039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 18532718 - 18532518
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18532718 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgagacc 18532619  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| | |||||||    
T  18532618 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagatagactg 18532519  T
Q  396 a 396  Q
    |    
T  18532518 a 18532518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 36816834 - 36816637
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||    
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||| |||||||||||||| ||||||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagactga 36816637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 3856123 - 3855923
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||| |  |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3856123 aggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgagacc 3856024  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||| |||||||||||| |||  |||||||| ||||||||  ||||| ||||| ||||||||||  ||||||||| ||||||||||||    
T  3856023 ccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtagactg 3855924  T
Q  396 a 396  Q
    |    
T  3855923 a 3855923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 22657423 - 22657225
Alignment:
Q  199 catttctttatcgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 297  Q
    ||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  22657423 catttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtgagacccc 22657324  T
Q  298 gttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
     ||||||||||||| |  ||||||||||| ||  |||||||||||||||   || |||||||||||||||||||| ||||||| |||||| ||||||||    
T  22657323 tttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatagactga 22657225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 33804985 - 33805073
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| ||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33804985 tagattataatgagctaagtcgggcggcgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 33805073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 27277756 - 27277564
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||| | | |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||| || | ||||||| | ||||||       
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt- 27277659  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||| |  || || ||||||||||||||||||||||||| |||||||||  ||  | |||| |||||||||||| ||||||||||||||||||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagac 27277564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 44710084 - 44709996
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| ||| |||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44710084 tagattataatgagctaagtcgggcggcgggtcaagcggttgtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 44709996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 50518050 - 50518128
Alignment:
Q  17 tgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50518050 tgagttaagtcgggcggcgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 50518128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 392
Target Start/End: Complemental strand, 12014457 - 12014292
Alignment:
Q  227 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagt 326  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||||||| ||| ||||| || ||| ||| |||||||||| ||  |||||||||||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  327 atccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    ||||||||| |||||||| ||  ||| | ||||  |||||||| || |||| ||||||||||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtaga 12014292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 45907835 - 45907747
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| ||| |||||||||||||||||  | |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45907835 tagattataatgagctaagtcgggcggggggtcaaccggtggtagaagatgatgaagaattgtacattgttgaaaatcttgatcccgat 45907747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 340
Target Start/End: Complemental strand, 12006712 - 12006599
Alignment:
Q  227 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagt 326  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||| |  |||||| |||||||||| | ||||||||||| |||||| |||||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  327 atccgtagtcaagc 340  Q
    || |||||||||||    
T  12006612 attcgtagtcaagc 12006599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 12864768 - 12864691
Alignment:
Q  17 tgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    |||||||||||||||||| ||||||| |||| ||| |||||| |||||| |||||||||||||||||||||||||||||    
T  12864768 tgagctaagtcgggcggcggatcaagaggtgataggagatgacgaagaa-tgtacattattgaaaatcttgatcccgat 12864691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 205 - 391
Target Start/End: Complemental strand, 9918106 - 9917927
Alignment:
Q  205 tttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaac 304  Q
    ||||| |||||||||||||| ||||||||||||||| ||       |||||  ||||||| |||||||||||||||||| ||   |||| ||  |||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgagatcca-ttaaat 9918014  T
Q  305 ataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtag 391  Q
    ||||||| |||||||||||| ||||  |||| |||||||||||  ||||| |||| |||| ||||||| ||| || ||||| |||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtag 9917927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 18251936 - 18251982
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  18251936 tgttggaataagccctaatagccaatctatattgattgggtttggct 18251982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 18532813 - 18532767
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  18532813 tgttggaataagccctaatagccaatctatattgattgggtttggct 18532767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 27310877 - 27310831
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  27310877 tgttggagtaagccctaatagccaatctatattgattgagtttggct 27310831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaa 268  Q
    ||||| ||||| | |||| |||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 295
Target Start/End: Original strand, 3403248 - 3403320
Alignment:
Q  223 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| |||||||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagacc 3403320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 295
Target Start/End: Complemental strand, 3443571 - 3443499
Alignment:
Q  223 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| |||||||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagacc 3443499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 16359336 - 16359301
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  16359336 tgttggagtaagccctaatagccaatctatattgat 16359301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 166; Significance: 1e-88; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 199 - 396
Target Start/End: Original strand, 24642655 - 24642852
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagactga 24642852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 198 - 396
Target Start/End: Original strand, 21940670 - 21940868
Alignment:
Q  198 gcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 297  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940670 gcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 21940769  T
Q  298 gttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
     ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  21940770 attaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 21940868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 199 - 392
Target Start/End: Original strand, 6094129 - 6094322
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||| ||||||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtaga 6094322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 196 - 394
Target Start/End: Original strand, 28554886 - 28555084
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||| |||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554886 aggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 28554985  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagact 394  Q
    || |||||||||| |||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| ||||||||    
T  28554986 ccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 28555084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 22171492 - 22171690
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22171492 aggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 22171591  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || |||||||||  |||| |||||| ||||||||||||||||||||||||||| |||||  |||||||||||||||| |||||||||||| |||||||||    
T  22171592 ccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagactg 22171689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 199 - 326
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  299 ttaaacataaggaaattattcttaaagt 326  Q
    ||||||||||||||| ||||||||||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 9138598 - 9138514
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    ||||| ||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9138598 tagattataatgagctaagtcgggcggcgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 9138514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 23256409 - 23256497
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| ||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23256409 tagattataatgagctaagtcgggcggcgagtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 23256497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 396
Target Start/End: Complemental strand, 38232570 - 38232381
Alignment:
Q  205 tttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaac 304  Q
    ||||| ||||||||||| ||||||||||||||| || ||||||||||||||| |||||||  |   ||| ||||||||||||  ||| || || ||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  305 ataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
     |||  | | ||||||||||||||  |||||||| |||||||| |||||||||||   |||||||||| | |||||| ||||||||||||||    
T  38232471 gtaaa-atagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagactga 38232381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 757556 - 757633
Alignment:
Q  18 gagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| ||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  757556 gagctaagtcgagcggcgggtcaagaggtggtagaagatgatgaagaattgtacataattgaaaatcttgatcccgat 757633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 392
Target Start/End: Original strand, 2375027 - 2375203
Alignment:
Q  214 tttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaa 313  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  |||||||||||||| |  || |||||||  ||| | ||| ||||||||| | | |    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatttatgatgacttaatcatga-aacccattaaacatacgaata 2375125  T
Q  314 ttattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    ||||| |||||||||  ||||||| | |||||||   ||||||||| |||||||| ||||  ||||||| |||||||||    
T  2375126 ttatttttaaagtatatgtagtcacgatttattg-cgagtgagataacattaaagtatatgaactattaagtgggtaga 2375203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 14825347 - 14825425
Alignment:
Q  17 tgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    |||||||||||||||||| | ||||   ||| ||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  14825347 tgagctaagtcgggcggcgggtcaaaaagtgataggagatgacgaataattgtacattattgaaaatcttgatcccgat 14825425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  231 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 294  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 32873019 - 32872948
Alignment:
Q  223 tttcaaaataataaagtccctagaatagttagtccgttta-atggaacattaagtataacttaattgtgaga 293  Q
    ||||||||||||||||||| || |||||||  ||| |||| || ||||||||||||| ||||||||||||||    
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgaga 32872948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 6094031 - 6094077
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  6094031 tgttggagtaagccctaatagccaatctatattgattgagtttggct 6094077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 24642556 - 24642602
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  24642556 tgttggagtaagccctaatagccaatctatattgattgggtttggct 24642602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 22070108 - 22070152
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  22070108 tgttggaataagccctaatagccaatctatattgattgggtttgg 22070152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 30200318 - 30200270
Alignment:
Q  297 cgttaaacataaggaaattattcttaaagtatccgtagtcaagctttat 345  Q
    ||||||| ||||||| |||||||||||||||| ||||||||| ||||||    
T  30200318 cgttaaaaataaggatattattcttaaagtatacgtagtcaacctttat 30200270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 16668577 - 16668616
Alignment:
Q  52 aagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  16668577 aagatgatgaagatttgtacattattgaaaatattgatcc 16668616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 21940573 - 21940608
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  21940573 tgttggaataagccctaatagccaatctatattgat 21940608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 22171396 - 22171431
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgat 22171431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 165; Significance: 4e-88; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 15152446 - 15152646
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152446 aggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 15152545  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  15152546 ccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 15152645  T
Q  396 a 396  Q
    |    
T  15152646 a 15152646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 29327787 - 29327987
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29327787 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagacc 29327886  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  29327887 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 29327986  T
Q  396 a 396  Q
    |    
T  29327987 a 29327987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 11536266 - 11536066
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11536266 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgagacc 11536167  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  11536166 ccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 11536067  T
Q  396 a 396  Q
    |    
T  11536066 a 11536066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 18561010 - 18561210
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  18561010 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagacc 18561109  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||||    
T  18561110 ccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagactg 18561209  T
Q  396 a 396  Q
    |    
T  18561210 a 18561210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 198 - 396
Target Start/End: Complemental strand, 11543182 - 11542984
Alignment:
Q  198 gcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 297  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11543182 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcagacccc 11543083  T
Q  298 gttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
     ||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  11543082 attaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 11542984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 12750829 - 12751029
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12750829 aggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagacc 12750928  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
     |||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||||| |||||||    
T  12750929 tcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagactg 12751028  T
Q  396 a 396  Q
    |    
T  12751029 a 12751029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 15148145 - 15148345
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  15148145 aggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagacc 15148244  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  15148245 ccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 15148344  T
Q  396 a 396  Q
    |    
T  15148345 a 15148345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 199 - 396
Target Start/End: Original strand, 12738542 - 12738739
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||  |    
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactga 12738739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 196 - 392
Target Start/End: Complemental strand, 18258046 - 18257850
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  18258046 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagacc 18257947  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    || ||||||| ||||| ||||||||||||||||||||||||||| ||| |||  ||||  |||| || ||| ||||| |||||||||||||| ||||    
T  18257946 ccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgtggataga 18257850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 19220290 - 19220378
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| ||| |||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19220290 tagattataatgagctaagtcgggcggcgggtcaagcggtggtaaaagatgatgaagaattgtacattattgaaaatcttgatcccgat 19220378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 215 - 396
Target Start/End: Original strand, 2364917 - 2365097
Alignment:
Q  215 ttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaat 314  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||| ||||||  || || ||    
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  315 tattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    |||||||||| ||| ||||||||| | ||||||  || ||||||| ||||||| |||| ||||||| |||||||| ||||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggtcgactga 2365097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 199 - 381
Target Start/End: Original strand, 13392157 - 13392338
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||| | || |||||||||||||||||||||||||| ||||||| | |||||| | |||||||| |||||||| | ||||||| |||||| |||     
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactatt 381  Q
    |||||   ||||| |||||||||||||||||  ||||||| ||||||||  ||  | |||| ||||||| |||| ||||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 41254271 - 41254183
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| ||| |||||||||||| ||||| | ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41254271 tagattataatgagctaagtcgagcggcgggtcaagcgatggtagaagatgatgaagaattatacattattgaaaatcttgatcccgat 41254183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 226 - 386
Target Start/End: Original strand, 7396221 - 7396382
Alignment:
Q  226 caaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaa 324  Q
    |||||||| || ||| |||||||||||||| | ||||| ||||||||||||||| |||||||  ||||||||  ||||||||||| ||||||||||||||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  325 gtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtg 386  Q
      ||  |||||||||| ||| ||  || |  |||   ||||||||||| |||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgtg 7396382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 286
Target Start/End: Original strand, 39111819 - 39111905
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaat 286  Q
    |||||||||||  |||||||||| |||||||| |||||||||||||||||||  ||||||||||||| |||||||||||  |||||||    
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaat 39111905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 15893643 - 15893730
Alignment:
Q  8 agataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    |||| ||| |||| ||||||||||||| | |  || |||| |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  15893643 agattataatgagttaagtcgggcggcgggtgtagaggtgatagaagatgacgaagaattgtacactattgaaaatcttgatcccgat 15893730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 23292041 - 23291984
Alignment:
Q  38 tcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  23292041 tcaagaggtgatagaagatgatgaaaaattgtacattattgaaaatctttatcccgat 23291984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 328
Target Start/End: Original strand, 3132748 - 3132809
Alignment:
Q  267 aacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtat 328  Q
    |||||||||| |||||||||||||||||||| ||||||||||||  |||||| | |||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataaggtcattattatgaaagtat 3132809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 12738443 - 12738489
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  12738443 tgttggagtaagccctaatagccaatctatattgattgggtttggct 12738489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  243 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataa 308  Q
    ||||||||||||||||||||||| | |||||| |||||||||||  |||||  || ||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 15152350 - 15152394
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  15152350 tgttggagtaagccctaatagccaatctatattgattgggtttgg 15152394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 29327690 - 29327734
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  29327690 tgttggagtaagccctaatagccaatctatattgattgggtttgg 29327734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 2653331 - 2653296
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  2653331 tgttggaataagccctaatagccaatctatattgat 2653296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 11543279 - 11543244
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgat 11543244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 12750733 - 12750779
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||| ||||||||||||| | ||||||||    
T  12750733 tgttggagtaagccctaatagctaatctatattgattgggtttggct 12750779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 131
Target Start/End: Original strand, 15148048 - 15148081
Alignment:
Q  98 gtgttggattaagccctaatagccaatctatatt 131  Q
    |||||||| |||||||||||||||||||||||||    
T  15148048 gtgttggagtaagccctaatagccaatctatatt 15148081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 165; Significance: 4e-88; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 24695670 - 24695470
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695670 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 24695571  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || |||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||| |||||||||    
T  24695570 ccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtagactg 24695471  T
Q  396 a 396  Q
    |    
T  24695470 a 24695470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 18570064 - 18569867
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18570064 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgagaccccg 18569965  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||  |||||||||||||||| |||||||||||| ||||||||||    
T  18569964 ttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtagactga 18569867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 19714702 - 19714502
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714702 aggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 19714603  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    |||||||||||||||||  |||||||||| |||||| |||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||    
T  19714602 ccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagactg 19714503  T
Q  396 a 396  Q
    |    
T  19714502 a 19714502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 19707419 - 19707222
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||||  |||||||||| |||||| |||||||||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagactga 19707222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 22547217 - 22547023
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||| |||||  |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | |     
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||| ||| ||| |||||| ||||||||| || |||||| ||||||||  |||||||||| |||||||  ||| |||||||||||||| |||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgtggatagac 22547023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 387
Target Start/End: Complemental strand, 27347679 - 27347491
Alignment:
Q  198 gcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 297  Q
    |||||||||| | |||||||||||| |||||||||||||||||| ||||||| ||| || |||||||||| |||||||| | ||||||| |||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  298 gttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgg 387  Q
     ||||||  ||||| ||||||||||||||||  |||||||||||||||||  ||  | |||| |||||||||||| |||||||| |||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactattttgtgg 27347491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 25763376 - 25763464
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| ||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25763376 tagattataatgagctaagtcgggcggcgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 25763464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 23350445 - 23350357
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| ||| |||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23350445 tagattataatgagctaagtcgggcggcgggtcaagcggtgatagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 23350357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 378
Target Start/End: Complemental strand, 17285935 - 17285754
Alignment:
Q  197 ggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 296  Q
    ||||||| ||||| ||||||||| ||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  297 cgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagact 378  Q
       |||||  || || |||||||||||||||| | ||||| | ||||||||  || || ||||  |||||||||||||||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 39537968 - 39538064
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||  |||||||||||||||||||||  | |||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  39537968 catttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgagacc 39538064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 396
Target Start/End: Complemental strand, 18807175 - 18807038
Alignment:
Q  259 tttaatggaacattaagtataacttaattgtgagaccccgttaaacataa-ggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgaga 357  Q
    |||||||||||||||||| | ||||||| ||||||| || ||||| |||| ||| |||||||||||||||||  ||||||||| ||||||  |||| |||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  358 tatcattaaagcatatagactattatgtgggtagactga 396  Q
    || || ||||||||| ||||||||||| |||||||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagactga 18807038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 378
Target Start/End: Complemental strand, 17299088 - 17298907
Alignment:
Q  197 ggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 296  Q
    ||||||| ||||| ||||||||| |||||  |||||||||  |||  ||||||||||||||| |||||||||||||||||   ||||||| |||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  297 cgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagact 378  Q
       |||||  || || |||||||||||||||| | ||||| | ||||||||  ||||| ||||  |||||||||||||||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 20231578 - 20231494
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    ||||| ||| |||||||||||||| ||| | ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  20231578 tagattataatgagctaagtcgggtggcgggtcaagcggtggtagaagatgatgaagaatagtatattattgaaaatcttaatcc 20231494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 34827624 - 34827537
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| ||| |||| ||||| ||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34827624 tagattataatgagttaagttgggcgacgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatctt-atcccgat 34827537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 330
Target Start/End: Original strand, 31886537 - 31886668
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||  ||||||||||||||||||| ||||||||||| ||||||| ||||| | |||||| |||||| |||||  ||||||| ||||||| ||     
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  299 ttaaacataaggaaattattcttaaagtatcc 330  Q
    ||||  ||||| | | ||||||||||| ||||    
T  31886637 ttaattataagaacaatattcttaaagaatcc 31886668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 306 - 396
Target Start/End: Original strand, 39538701 - 39538791
Alignment:
Q  306 taaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    |||||| | |||||||||| ||||| |||| |||||||||||  ||||| ||||||||||||||||  |||||||||||||||||||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagactga 39538791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 13849142 - 13849096
Alignment:
Q  45 gtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  13849142 gtggtagaagatgatgaagaattgtacattattgaacatcttgatcc 13849096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 27347778 - 27347732
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  27347778 tgttggagtaagccctaatagccaatctatattgattgcgtttggct 27347732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 19707518 - 19707472
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  19707518 tgttggagtaagccctaatagccaatctatattgattgagtttggct 19707472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 19714798 - 19714752
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  19714798 tgttggagtaagccctaatagccaatctatattgattgggtttggct 19714752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 24695765 - 24695719
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggct 24695719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 309
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  219 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataag 309  Q
    ||||||||||||||||||||||| || ||||||||| | | |||||||| |||||||| | |  |||| |||||||| | |||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 16491188 - 16491105
Alignment:
Q  8 agataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    |||| ||| |||||||||||||||| | | |  ||  ||| ||||||| || |||||||||||| |||||||||||||||||||    
T  16491188 agattataatgagctaagtcgggcgacgggtgtagacgtgatagaagaagacgaagaattgtacgttattgaaaatcttgatcc 16491105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 133
Target Start/End: Original strand, 39537869 - 39537904
Alignment:
Q  98 gtgttggattaagccctaatagccaatctatattga 133  Q
    ||||||||||||||||||||||||||||||| ||||    
T  39537869 gtgttggattaagccctaatagccaatctatgttga 39537904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 31056814 - 31056776
Alignment:
Q  53 agatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  31056814 agatgatgaagatttgtacattattgaaaatcttaatcc 31056776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 11479420 - 11479496
Alignment:
Q  243 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc-cgttaaacataaggaaattatt 318  Q
    ||||||| |||||  |||||||| || ||||||| | |||| |||||||||||| | ||||||||||||| ||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataaggatattatt 11479496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 162; Significance: 2e-86; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 21330449 - 21330252
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21330449 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 21330350  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||| ||||||    
T  21330349 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtggactga 21330252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 212 - 396
Target Start/End: Original strand, 18796525 - 18796709
Alignment:
Q  212 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataagga 311  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  18796525 attttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacctcttttaacataagga 18796624  T
Q  312 aattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
     |||||||||||| |||| |||||||||||||||||  |||||  |||||||||||||||  |||||||||||||||||||||||    
T  18796625 tattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtagactga 18796709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 200 - 391
Target Start/End: Original strand, 18619812 - 18620002
Alignment:
Q  200 atttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgt 299  Q
    |||||||| | |||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||| ||||| ||| |    
T  18619812 atttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga-cccat 18619910  T
Q  300 taaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtag 391  Q
    |||||| ||||| ||||||||||||||||| || ||||| ||||||||  ||  | ||||  ||||||||||||||||||||||||||||||    
T  18619911 taaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtag 18620002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 338
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||  | |||||||  ||||| | |     
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaa 338  Q
    ||||||  |||||||||||||||||||||||| |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 258 - 393
Target Start/End: Original strand, 20977957 - 20978092
Alignment:
Q  258 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgaga 357  Q
    |||||||||||||||||| |||| |||||  ||||| ||| ||||| ||||||||||||||||||||  |||||||||||||||||| ||  ||||||||    
T  20977957 gtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgaga 20978056  T
Q  358 tatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||| ||||||||| |||||||||||||| |||||    
T  20978057 tatcactaaagcatagagactattatgtggatagac 20978092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 29811423 - 29811511
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| ||| |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29811423 tagattataatgagttaagtcgggcggcgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 29811511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 30215150 - 30215238
Alignment:
Q  7 tagataatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| ||| |||||||||||||||||| | | ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30215150 tagattataatgagctaagtcgggcggcgggttaagcgatggtagaagatgatgaagaattatacattattgaaaatcttgatcccgat 30215238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 396
Target Start/End: Original strand, 36270199 - 36270369
Alignment:
Q  227 aaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaag 325  Q
    |||||||||||||||||||||||||||||    |||| || ||  |||||| | ||||||| |||||||  | ||||||| || || | ||||||||||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  326 tatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
     ||||||| |||||||||| ||  ||| | |||| |||||||| ||| |||||||| ||||||||||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagactga 36270369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 18822115 - 18822275
Alignment:
Q  227 aaaataataaagtccctagaatagttagtccgtttaa-tggaaca-ttaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaa 324  Q
    ||||||||||||||  |||||| |||||| ||||||| ||||| | |||||| |  |||||| ||||||| || ||||||| ||||| | ||||||||||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  325 gtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgt 385  Q
      ||  ||| |||||||||| |   ||||| ||||||||||||||| ||||| ||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgt 18822275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 229 - 384
Target Start/End: Complemental strand, 36802820 - 36802664
Alignment:
Q  229 aataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagta 327  Q
    ||||||||||||| | ||||||||| | ||||||| ||||| ||||| | | |||||||||  |||   | ||||||| || || ||||||||||||  |    
T  36802820 aataataaagtcctttgaatagttaattcgtttaaatggaatattaaatgttacttaattgcaagatatcattaaacacaatgacattattcttaaaaca 36802721  T
Q  328 tccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatg 384  Q
    |||||| ||||| || | || |||||| |||| |||||||||||||||| |||||||    
T  36802720 tccgtaatcaagattcagtgtaaagtgggataacattaaagcatatagattattatg 36802664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 386
Target Start/End: Complemental strand, 24471792 - 24471642
Alignment:
Q  235 aaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtatccgtag 334  Q
    |||||||||| |||| |||||| ||||||| |  ||||| || | |||||||||||||||  | ||  ||||||| | ||||||||| |||||||| ||     
T  24471792 aaagtccctaaaatatttagtcggtttaatagc-cattatgtgtgacttaattgtgagacatcatttgacataagaacattattctttaagtatccatac 24471694  T
Q  335 tcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtg 386  Q
     ||| || ||||  |||||| |||| || ||||||||| |||||||||||||    
T  24471693 acaaactctattttaaagtgggataacactaaagcataaagactattatgtg 24471642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 21330549 - 21330503
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  21330549 tgttggaataagccctaatagccaatctatattgattgggtttggct 21330503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 26269038 - 26269103
Alignment:
Q  26 tcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    ||||||||||||| | | |||||||| |||||| |||||  ||||||||||||||||||| |||||    
T  26269038 tcgggcggcagattatgaggtggtagtagatgacgaagatctgtacattattgaaaatctagatcc 26269103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 161; Significance: 9e-86; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 7138 - 6938
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7138 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgagacc 7039  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    |  ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  7038 ctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 6939  T
Q  396 a 396  Q
    |    
T  6938 a 6938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 14154 - 13954
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14154 aggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgagacc 14055  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  14054 ccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagactg 13955  T
Q  396 a 396  Q
    |    
T  13954 a 13954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 7233 - 7189
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttgg 7189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 14249 - 14205
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  14249 tgttggaataagccctaatagccaatctatattgattgagtttgg 14205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 157; Significance: 2e-83; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 200 - 396
Target Start/End: Original strand, 7114 - 7310
Alignment:
Q  200 atttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgt 299  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  7114 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgagaccccat 7213  T
Q  300 taaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  7214 taaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 7310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 7015 - 7061
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggct 7061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 157; Significance: 2e-83; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 196 - 396
Target Start/End: Original strand, 18291 - 18491
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  18291 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgagacc 18390  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactg 395  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||||    
T  18391 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 18490  T
Q  396 a 396  Q
    |    
T  18491 a 18491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 18196 - 18242
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  18196 tgttggaataagccctaatagccaatctatattgattgggtttggct 18242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 26191 - 25994
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||     
T  26191 catttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgagacccca 26092  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||    
T  26091 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtagactga 25994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 26286 - 26240
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| ||||||||||||| |||||||||||||| | ||||||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggct 26240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 199 - 396
Target Start/End: Original strand, 999 - 1196
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  999 catttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgagacccca 1098  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagactga 396  Q
    |||||||||| |||| |||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  1099 ttaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 1196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 901 - 947
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  901 tgttggaataagccctaatagccaatctatattgattgggtttggct 947  T

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Target: scaffold0008 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 196 - 372
Target Start/End: Complemental strand, 230544 - 230369
Alignment:
Q  196 aggcatttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  230544 aggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 230445  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcata 372  Q
    || |||||||||||||||  |||||||||||||  ||||||||| |||||||| ||||| |||||||||||||||||    
T  230444 cc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcata 230369  T

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Target: scaffold0176 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 8504 - 8446
Alignment:
Q  199 catttctttatcgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8504 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

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Target: scaffold0176; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 8602 - 8567
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  8602 tgttggaataagccctaatagccaatctatattgat 8567  T

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Target: scaffold0176; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 26223 - 26176
Alignment:
Q  44 ggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    |||| ||| |||||| ||||| ||||||||||||||||||||||||||    
T  26223 ggtgataggagatgaagaagatttgtacattattgaaaatcttgatcc 26176  T

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Target: scaffold0326 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 16523 - 16569
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggct 16569  T

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Target: scaffold0203 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 23825 - 23779
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggct 23779  T

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Target: scaffold0767 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 37 - 2
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37 tgttggaataagccctaatagccaatctatattgat 2  T

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Target: scaffold0565 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 243
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  212 attttgttttgtttcaaaataataaagtccct 243  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

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Target: scaffold0032 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 92194 - 92317
Alignment:
Q  222 gtttcaaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattct 320  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||  |  ||||||  | |  ||||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagacagcaataaacagcaaggcattattct 92293  T
Q  321 taaagtatccgtagtcaagcttta 344  Q
    ||||  || |||||||||||||||    
T  92294 taaaacattcgtagtcaagcttta 92317  T

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