View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8180A_low_75 (Length: 326)
Name: NF8180A_low_75
Description: NF8180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8180A_low_75 |
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Alignment Details
Target: chr4 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 37907176 - 37906852
Alignment:
| Q |
1 |
attattctttagtatacagaagaaaactctcagacattgtgaggtgaaacaggaaaattaaatctgcttttgatgttcattgtctaaaaatgatgaagga |
100 |
Q |
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| T |
37907176 |
attattctttagtatacagaagaaaactctcagacattgtgaggtgaaacaggaaaattaaatctgcttttgatgttcattgtctaaaaatgatgaagga |
37907077 |
T |
|
| Q |
101 |
ttttgtgctttaccagtgccttcttgattataaaccaagaggatcacttctttgtagttttttgtagcatagtcaattatgttttatcttcattgcagtg |
200 |
Q |
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| T |
37907076 |
ttttgtgctttaccagtgccttcttgattataaaccaagaggatcacttctttgtagttttttgtagcatagtcaattatgttttatcttcattgcagtg |
37906977 |
T |
|
| Q |
201 |
aaaagnnnnnnnnattgacaagcacgacgtgtctttgatgatttgttttcacactacaagtgagatgttatcgttgaaaatcattatgtattaattagtg |
300 |
Q |
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| T |
37906976 |
aaaagttttttttattgacaagcacgacgtgtctttgatgatttgttttcacactacaagtgagatgtaatcgttgaaaatcattatgtattaattagcg |
37906877 |
T |
|
| Q |
301 |
cattcgtctaattggacacattttg |
325 |
Q |
| |
|
||||||||||||||||||||||||| |
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| T |
37906876 |
cattcgtctaattggacacattttg |
37906852 |
T |
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