View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8181_low_12 (Length: 283)
Name: NF8181_low_12
Description: NF8181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8181_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 36490567 - 36490839
Alignment:
| Q |
1 |
aagcggctttccgccaaccctaattacttcatttacaggatactcatactatacaatcataattggcctttccgtcaaccctaatcacttcatttacagg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36490567 |
aagcggctttccgccaaccctaattacttcatttacaggatactcatactatacaatcataattggcctttccgtcaaccctaatcacttcatttacagg |
36490666 |
T |
|
| Q |
101 |
atactgtacaaccataactggcctttctatcaactatgctgtttatttggcgtgatgattcatcaatgtgttgatgttcttcttttccgtgcttcaaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36490667 |
atactgtacaaccataactggcctttctatcaactatgctgtttatttggcgtgatgattcatcaatgtgttgatgttcttcttttccgtgcttcaaaat |
36490766 |
T |
|
| Q |
201 |
gtttctttgtttggacttttttccctgttatttatatatacattacacatcattggttaatatatgtgatgtc |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
36490767 |
gtttctttgtttggacttttttccctgttatttatatatacattacacatcattggttaatatatgttatgtc |
36490839 |
T |
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