View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8181_low_4 (Length: 666)

Name: NF8181_low_4
Description: NF8181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8181_low_4
NF8181_low_4
[»] chr5 (13 HSPs)
chr5 (242-651)||(3234515-3234926)
chr5 (1-133)||(3236594-3236726)
chr5 (134-193)||(26888933-26888987)
chr5 (348-409)||(29598383-29598444)
chr5 (134-193)||(435560-435614)
chr5 (134-193)||(16670026-16670080)
chr5 (134-193)||(24100698-24100752)
chr5 (134-193)||(27098546-27098600)
chr5 (134-193)||(27851041-27851095)
chr5 (134-193)||(29962179-29962233)
chr5 (134-193)||(30012565-30012619)
chr5 (134-193)||(38312331-38312385)
chr5 (134-201)||(16669503-16669566)
[»] chr7 (39 HSPs)
chr7 (334-504)||(18325376-18325546)
chr7 (335-505)||(22020536-22020706)
chr7 (348-486)||(16840135-16840273)
chr7 (348-486)||(16847218-16847356)
chr7 (348-477)||(16841691-16841820)
chr7 (340-426)||(22027807-22027893)
chr7 (335-485)||(22036248-22036398)
chr7 (334-407)||(22039442-22039515)
chr7 (129-193)||(13965046-13965105)
chr7 (134-193)||(37373972-37374026)
chr7 (359-417)||(22087779-22087837)
chr7 (134-207)||(45456725-45456794)
chr7 (550-639)||(22020748-22020837)
chr7 (137-193)||(17489523-17489574)
chr7 (137-193)||(17563640-17563691)
chr7 (134-193)||(3217752-3217806)
chr7 (134-165)||(7776486-7776517)
chr7 (134-193)||(7776955-7777009)
chr7 (134-193)||(18458773-18458827)
chr7 (134-193)||(20493751-20493805)
chr7 (134-165)||(22570120-22570151)
chr7 (134-165)||(23440490-23440521)
chr7 (134-193)||(24733635-24733689)
chr7 (134-193)||(27284248-27284302)
chr7 (134-193)||(27284607-27284661)
chr7 (134-165)||(29933708-29933739)
chr7 (134-193)||(31852080-31852134)
chr7 (134-165)||(32072327-32072358)
chr7 (134-193)||(36720991-36721045)
chr7 (134-193)||(37374455-37374509)
chr7 (134-193)||(39143509-39143563)
chr7 (134-208)||(40851760-40851830)
chr7 (134-193)||(40852158-40852212)
chr7 (134-193)||(47987333-47987387)
chr7 (134-211)||(29414490-29414563)
chr7 (134-193)||(44332209-44332265)
chr7 (163-202)||(3217226-3217266)
chr7 (137-193)||(42287317-42287368)
chr7 (137-193)||(45457105-45457156)
[»] chr2 (13 HSPs)
chr2 (339-418)||(10206230-10206311)
chr2 (134-193)||(18470068-18470122)
chr2 (134-193)||(2970815-2970869)
chr2 (134-193)||(4602815-4602869)
chr2 (134-193)||(11713995-11714049)
chr2 (134-165)||(14287860-14287891)
chr2 (134-193)||(31557097-31557151)
chr2 (134-193)||(32194448-32194502)
chr2 (134-193)||(32194827-32194881)
chr2 (134-193)||(34618520-34618574)
chr2 (134-203)||(39109501-39109566)
chr2 (593-633)||(10206024-10206064)
chr2 (137-193)||(26424825-26424876)
[»] chr8 (21 HSPs)
chr8 (134-193)||(2620244-2620302)
chr8 (134-205)||(2221587-2221654)
chr8 (134-193)||(762169-762223)
chr8 (134-204)||(45123214-45123280)
chr8 (134-193)||(22595143-22595199)
chr8 (134-202)||(26060102-26060166)
chr8 (134-193)||(761399-761453)
chr8 (134-193)||(2221964-2222018)
chr8 (134-193)||(7116478-7116532)
chr8 (134-193)||(9739783-9739837)
chr8 (134-193)||(11713206-11713260)
chr8 (134-193)||(13089444-13089498)
chr8 (134-193)||(22013468-22013522)
chr8 (134-193)||(27786483-27786537)
chr8 (134-193)||(31445675-31445729)
chr8 (134-193)||(41154623-41154677)
chr8 (134-193)||(41155012-41155066)
chr8 (134-193)||(42193785-42193839)
chr8 (134-165)||(45433783-45433814)
chr8 (134-193)||(41836499-41836554)
chr8 (134-205)||(43633587-43633654)
[»] chr4 (24 HSPs)
chr4 (134-204)||(1098047-1098113)
chr4 (134-193)||(26673121-26673175)
chr4 (134-193)||(28505071-28505125)
chr4 (134-193)||(41845870-41845924)
chr4 (134-202)||(41610123-41610187)
chr4 (134-201)||(17475881-17475944)
chr4 (134-165)||(9181946-9181977)
chr4 (134-193)||(17475403-17475457)
chr4 (134-193)||(20614614-20614668)
chr4 (134-193)||(25618442-25618496)
chr4 (134-193)||(31487984-31488038)
chr4 (134-193)||(34237487-34237541)
chr4 (134-193)||(42369507-42369561)
chr4 (134-193)||(46058701-46058755)
chr4 (134-193)||(48453639-48453693)
chr4 (134-193)||(48454003-48454057)
chr4 (134-165)||(52574704-52574735)
chr4 (134-193)||(56271214-56271268)
chr4 (134-193)||(11649510-11649565)
chr4 (134-207)||(24045356-24045425)
chr4 (134-207)||(43291959-43292028)
chr4 (346-407)||(11971848-11971909)
chr4 (134-206)||(46307548-46307616)
chr4 (134-205)||(14525935-14526002)
[»] chr1 (20 HSPs)
chr1 (134-204)||(46448739-46448805)
chr1 (134-201)||(3798321-3798384)
chr1 (134-201)||(50227912-50227975)
chr1 (134-193)||(3798708-3798762)
chr1 (134-165)||(14244195-14244226)
chr1 (134-193)||(14244558-14244612)
chr1 (134-193)||(24370121-24370175)
chr1 (134-193)||(31488031-31488085)
chr1 (134-193)||(34023572-34023626)
chr1 (134-193)||(37483060-37483114)
chr1 (134-193)||(37483541-37483595)
chr1 (134-193)||(38980052-38980106)
chr1 (134-193)||(44114516-44114570)
chr1 (134-193)||(45678718-45678772)
chr1 (134-193)||(46448223-46448277)
chr1 (134-193)||(50138501-50138555)
chr1 (135-193)||(49548606-49548663)
chr1 (134-203)||(50227510-50227575)
chr1 (137-193)||(6714704-6714755)
chr1 (134-201)||(15073412-15073475)
[»] scaffold0027 (1 HSPs)
scaffold0027 (134-165)||(124966-124997)
[»] scaffold0005 (1 HSPs)
scaffold0005 (134-193)||(1481-1535)
[»] scaffold0002 (1 HSPs)
scaffold0002 (134-193)||(283172-283226)
[»] chr6 (10 HSPs)
chr6 (134-193)||(14527515-14527569)
chr6 (134-193)||(17383741-17383795)
chr6 (134-193)||(21271492-21271546)
chr6 (134-193)||(21272117-21272171)
chr6 (134-193)||(22498765-22498819)
chr6 (134-193)||(26392843-26392897)
chr6 (134-193)||(31739913-31739967)
chr6 (134-195)||(34751939-34751995)
chr6 (134-201)||(9424906-9424969)
chr6 (137-193)||(17383934-17383985)
[»] chr3 (8 HSPs)
chr3 (134-193)||(12739884-12739938)
chr3 (134-193)||(12739970-12740024)
chr3 (134-193)||(24242995-24243049)
chr3 (134-193)||(45940221-45940275)
chr3 (134-165)||(48946206-48946237)
chr3 (134-191)||(27990270-27990322)
chr3 (134-191)||(40503730-40503782)
chr3 (129-165)||(588282-588318)


Alignment Details
Target: chr5 (Bit Score: 343; Significance: 0; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 242 - 651
Target Start/End: Complemental strand, 3234926 - 3234515
Alignment:
Q  242 attacctctaaatagcaattttttcttccatagacaacgcctctctcgtgaatctccctcccacaaccgaaattgcagtgtcggtacgctgtgtcatcgc 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    |||||||| ||||||||||||||||||||||||||    
T  3234926 attacctctaaatagcaattttttcttccatagacaacgcctctctcatgaatctcccacc----accgaaatcgcagtgtcggtacgctgtgtcatcgc 3234831  T
Q  342 cgataatcctccctgtagaacttatcacagaagtgctttctttccttcctgtgaaa--tctctgatgcgaatgaagtgctgctgtaaatcttggaatgcc 439  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  3234830 cgataatcctccctgtagaacttatcacagaagtgctttctttccttcctgtgaaaaatctctgatgcgaatgaagtgctgctgtaaatcttggaatgcc 3234731  T
Q  440 ttcatatccgatcctttctttgtcaagttgcaccttcaacgatctacgagaaaccctcacctcacacttgcatcca----gacgtacacgacctacagag 535  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    ||||||||||||||||||||    
T  3234730 ttcatatccgatcctttctttgtcaagttgcaccttcaacgatctacgcgaaaccctcacctcacacttgcatgcatctagacgtacacgacctacagag 3234631  T
Q  536 catagcagtgttgtaccaatctccttgagtcgtttgctggagagtccttcaaattcgatcacctttaccgaagatccttactataatttgaaggataaag 635  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3234630 catagcagtgttgtaccaatctccttgagtcgtttgctggagagtccatcaaattcgatcacccttaccgaagatccttactataatttgaaggataaag 3234531  T
Q  636 attgtccatcggttat 651  Q
    ||||||||||||||||    
T  3234530 attgtccatcggttat 3234515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 3236726 - 3236594
Alignment:
Q  1 gagtactgagcatgtcttgaagaacaggtttgggtttgttattgctgatgtttggtttcattgaagattgcgaacatcacaaatatgacaaactgcacca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3236726 gagtactgagcatgtcttgaagaacaggtttgggtttgttattgctgatgtttagtttcattgaagattgcgaacatcacaaatatgacaaactgcacca 3236627  T
Q  101 cgcacacaaatatgaaatttaactattcttaaa 133  Q
    |||||||||||||||||||||||||||||||||    
T  3236626 cgcacacaaatatgaaatttaactattcttaaa 3236594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 26888933 - 26888987
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||||||||     ||||||||||||||||||| |||||||||||    
T  26888933 tagttaagggaccaaagcgatatc-----aattaaatagttaagggaccaaaagagcatt 26888987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 348 - 409
Target Start/End: Complemental strand, 29598444 - 29598383
Alignment:
Q  348 tcctccctgtagaacttatcacagaagtgctttctttccttcctgtgaaatctctgatgcga 409  Q
    |||||||||  ||||| ||| ||||||| ||||| |||||||||||| ||||||||||||||    
T  29598444 tcctccctgatgaactcatcgcagaagtcctttcattccttcctgtgcaatctctgatgcga 29598383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 435614 - 435560
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  435614 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 435560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 16670026 - 16670080
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  16670026 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 16670080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 24100698 - 24100752
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  24100698 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 24100752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 27098600 - 27098546
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  27098600 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 27098546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 27851041 - 27851095
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  27851041 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 27851095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 29962179 - 29962233
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  29962179 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 29962233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 30012619 - 30012565
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  30012619 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 30012565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 38312385 - 38312331
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  38312385 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 38312331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 16669566 - 16669503
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagcctta 201  Q
    |||||||||||||||||||||| |     |||||||||||||||| || ||||||||| ||||||||||    
T  16669566 tagttaagggaccaaagcgatacc-----aattaaatagttaaggaaccaaaagagcatttaagcctta 16669503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 334 - 504
Target Start/End: Original strand, 18325376 - 18325546
Alignment:
Q  334 gtcatcgccgataatcctccctgtagaacttatcacagaagtgctttctttccttcctgtgaaatctctgatgcgaatgaagtgctgctgtaaatcttgg 433  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||  ||||||||||||||||| |||| | | |||||||| |||||||| |||    
T  18325376 gtcatcgccgataatcctccccgatgaacttatcacagaagtgctttcttatcttcctgtgaaatctcttatgcaactaaagtgctgttgtaaatcatgg 18325475  T
Q  434 aatgccttcatatccgatcctttctttgtcaagttgcaccttcaacgatctacgagaaaccctcacctcac 504  Q
    ||  || || | ||| | ||||||||  ||| ||||||||||||||| ||| | | |||||||||| ||||    
T  18325476 aacaccctcgtgtccaaacctttcttcatcaggttgcaccttcaacgttcttcaaaaaaccctcacttcac 18325546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 335 - 505
Target Start/End: Original strand, 22020536 - 22020706
Alignment:
Q  335 tcatcgccgataatcctccctgtagaacttatcacagaagtgctttctttccttcctgtgaaatctctgatgcgaatgaagtgctgctgtaaatcttgga 434  Q
    |||||||||||||| |||||||  ||  ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||   ||||| || ||||    
T  22020536 tcatcgccgataattctccctgatgagattatcacagaactgctttctttccttccagtgaaatctctgatgcgaatgaagtgcgtttgtaagtcatgga 22020635  T
Q  435 atgccttcatatccgatcctttctttgtcaagttgcaccttcaacgatctacgagaaaccctcacctcaca 505  Q
    |     | |||||| || ||| ||||||| | ||||||||||| ||||||||| |||||||||| ||||||    
T  22020636 aaataataatatccaattcttcctttgtcgaattgcaccttcaccgatctacgcgaaaccctcaactcaca 22020706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 348 - 486
Target Start/End: Complemental strand, 16840273 - 16840135
Alignment:
Q  348 tcctccctgtagaacttatcacagaagtgctttctttccttcctgtgaaatctctgatgcgaatgaagtgctgctgtaaatcttggaatgccttcatatc 447  Q
    |||||||||  |||||||||  |||||||||||||||||||||||||||| |||| |||||| ||| || |||||||||||| |||||  || || ||||    
T  16840273 tcctccctgacgaacttatcgtagaagtgctttctttccttcctgtgaaaactcttatgcgactgaggtcctgctgtaaatcgtggaactccctcgtatc 16840174  T
Q  448 cgatcctttctttgtcaagttgcaccttcaacgatctac 486  Q
    | ||||||| || ||||||| ||||||||| || |||||    
T  16840173 caatcctttattcgtcaagtcgcaccttcagcgttctac 16840135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 348 - 486
Target Start/End: Complemental strand, 16847356 - 16847218
Alignment:
Q  348 tcctccctgtagaacttatcacagaagtgctttctttccttcctgtgaaatctctgatgcgaatgaagtgctgctgtaaatcttggaatgccttcatatc 447  Q
    |||||||||  |||||||||  |||||||||||||||||||||||| ||| |||| |||||| ||| || |||||||||||| |||||  || || ||||    
T  16847356 tcctccctgacgaacttatcgtagaagtgctttctttccttcctgttaaaactcttatgcgactgaggtcctgctgtaaatcgtggaactccctcgtatc 16847257  T
Q  448 cgatcctttctttgtcaagttgcaccttcaacgatctac 486  Q
    ||||||||| || ||||||| ||||||||| || |||||    
T  16847256 cgatcctttattcgtcaagtcgcaccttcagcgttctac 16847218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 348 - 477
Target Start/End: Complemental strand, 16841820 - 16841691
Alignment:
Q  348 tcctccctgtagaacttatcacagaagtgctttctttccttcctgtgaaatctctgatgcgaatgaagtgctgctgtaaatcttggaatgccttcatatc 447  Q
    |||||||||  || ||||||  |||||||||||||||||||||||||||| |||| |||||| | | || |||||||||||| |  ||  || || ||||    
T  16841820 tcctccctgacgaccttatcgtagaagtgctttctttccttcctgtgaaaactcttatgcgactaaggtcctgctgtaaatcgtcaaactccctcgtatc 16841721  T
Q  448 cgatcctttctttgtcaagttgcaccttca 477  Q
    ||||||||| || ||||||| |||||||||    
T  16841720 cgatcctttattcgtcaagtcgcaccttca 16841691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 340 - 426
Target Start/End: Original strand, 22027807 - 22027893
Alignment:
Q  340 gccgataatcctccctgtagaacttatcacagaagtgctttctttccttcctgtgaaatctctgatgcgaatgaagtgctgctgtaa 426  Q
    |||||||||||| ||||  ||||||||||||||| |||||||||| ||||| || ||||||||||| ||| | |||||||| |||||    
T  22027807 gccgataatccttcctgacgaacttatcacagaactgctttcttttcttcccgtcaaatctctgatccgattcaagtgctgttgtaa 22027893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 335 - 485
Target Start/End: Original strand, 22036248 - 22036398
Alignment:
Q  335 tcatcgccgataatcctccctgtagaacttatcacagaagtgctttctttccttcctgtgaaatctctgatgcgaatgaagtgctgctgtaaatcttgga 434  Q
    ||||| ||||||||||||||| | || |||||||||||| |||||||||||||||| || ||||||||| ||| | | | ||||   ||||  || ||||    
T  22036248 tcatcaccgataatcctccctcttgaccttatcacagaactgctttctttccttccggtcaaatctctgctgcaattcaggtgcgtttgtatgtcatgga 22036347  T
Q  435 atgccttcatatccgatcctttctttgtcaagttgcaccttcaacgatcta 485  Q
    |   | | ||||||||| ||||||| ||||| ||||||||||| |||||||    
T  22036348 aaatcctaatatccgattctttcttcgtcaaattgcaccttcagcgatcta 22036398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 334 - 407
Target Start/End: Original strand, 22039442 - 22039515
Alignment:
Q  334 gtcatcgccgataatcctccctgtagaacttatcacagaagtgctttctttccttcctgtgaaatctctgatgc 407  Q
    ||||| |||||||||||||||||  ||  ||||||||||| |||||||||||||||| || |||||||||||||    
T  22039442 gtcattgccgataatcctccctgatgagattatcacagaactgctttctttccttccggtcaaatctctgatgc 22039515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 13965105 - 13965046
Alignment:
Q  129 ttaaatagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  13965105 ttaaatagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 13965046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 37374026 - 37373972
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||||||||||||     ||||||||||||||| |||||||||||    
T  37374026 tagttaagggaccaaagcgatatcaatt-----aaatagttaagggaccaaaagagcatt 37373972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 22087779 - 22087837
Alignment:
Q  359 gaacttatcacagaagtgctttctttccttcctgtgaaatctctgatgcgaatgaagtg 417  Q
    ||||||||||||||||||||||| |||||| |||| |||||||| |||||  |||||||    
T  22087779 gaacttatcacagaagtgctttccttcctttctgtcaaatctctcatgcggctgaagtg 22087837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 45456794 - 45456725
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaataaa 207  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  45456794 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatttaagccttaattaaa 45456725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 639
Target Start/End: Original strand, 22020748 - 22020837
Alignment:
Q  550 accaatctccttgagtcgtttgctggagagtccttcaaattcgatcacctttaccgaagatccttactataatttgaaggataaagattg 639  Q
    ||||||||||||||||| |||| |||||||||| || ||  | || ||| ||||||| ||||||||||||  |||||| ||||| |||||    
T  22020748 accaatctccttgagtcatttgttggagagtccatcgaagcccataacccttaccgacgatccttactatcttttgaatgataaggattg 22020837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 17489574 - 17489523
Alignment:
Q  137 ttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||||||     ||||||||||||||| |||||||||||    
T  17489574 ttaagggaccaaagcgatatcaatt-----aaatagttaagggaccaaaagagcatt 17489523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 17563640 - 17563691
Alignment:
Q  137 ttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||     ||||||||||||||||||| |||||||||||    
T  17563640 ttaagggaccaaagcgatatc-----aattaaatagttaagggaccaaaagagcatt 17563691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 3217752 - 3217806
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  3217752 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 3217806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 165
Target Start/End: Complemental strand, 7776517 - 7776486
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaat 165  Q
    ||||||||||||||||||||||||||||||||    
T  7776517 tagttaagggaccaaagcgatatcaattaaat 7776486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 7776955 - 7777009
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  7776955 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 7777009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 18458773 - 18458827
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  18458773 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 18458827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 20493805 - 20493751
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  20493805 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 20493751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 165
Target Start/End: Original strand, 22570120 - 22570151
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaat 165  Q
    ||||||||||||||||||||||||||||||||    
T  22570120 tagttaagggaccaaagcgatatcaattaaat 22570151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 165
Target Start/End: Complemental strand, 23440521 - 23440490
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaat 165  Q
    ||||||||||||||||||||||||||||||||    
T  23440521 tagttaagggaccaaagcgatatcaattaaat 23440490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 24733689 - 24733635
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  24733689 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 24733635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 27284302 - 27284248
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  27284302 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 27284248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 27284607 - 27284661
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  27284607 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 27284661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 165
Target Start/End: Original strand, 29933708 - 29933739
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaat 165  Q
    ||||||||||||||||||||||||||||||||    
T  29933708 tagttaagggaccaaagcgatatcaattaaat 29933739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 31852080 - 31852134
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  31852080 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 31852134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 165
Target Start/End: Complemental strand, 32072358 - 32072327
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaat 165  Q
    ||||||||||||||||||||||||||||||||    
T  32072358 tagttaagggaccaaagcgatatcaattaaat 32072327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 36720991 - 36721045
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||||||||||||||||     | ||||||||| |||||||||||    
T  36720991 tagttaagggaccaaagcgatatcaattaaat-----acttaagggaccaaaagagcatt 36721045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 37374455 - 37374509
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  37374455 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 37374509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 39143509 - 39143563
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  39143509 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 39143563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 208
Target Start/End: Complemental strand, 40851830 - 40851760
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaataaat 208  Q
    ||||||||| |||||||||||| |     ||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  40851830 tagttaaggaaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatttaagcctaaaataaat 40851760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 40852158 - 40852212
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  40852158 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 40852212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 47987387 - 47987333
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  47987387 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 47987333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 29414490 - 29414563
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaataaataaa 211  Q
    |||||||||||||||||||||| |      |||||||||||||||||| ||||||||| ||||| || |||||||||||    
T  29414490 tagttaagggaccaaagcgatacc-----tattaaatagttaagggaccaaaagagcatttaagtctaaaataaataaa 29414563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 44332265 - 44332209
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||| |||||||||||||||   ||| ||||| ||| |||||||||||    
T  44332265 tagttaagggaccaaaacgatatcaattaaat---atacttaagagactaaaagagcatt 44332209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 3217266 - 3217226
Alignment:
Q  163 aattaaatagttaagggacgaaaagagca-ttaagccttaa 202  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  3217266 aattaaatagttaagggaccaaaagagcatttaagccttaa 3217226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 42287368 - 42287317
Alignment:
Q  137 ttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  42287368 ttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 42287317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 45457105 - 45457156
Alignment:
Q  137 ttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  45457105 ttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 45457156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 339 - 418
Target Start/End: Complemental strand, 10206311 - 10206230
Alignment:
Q  339 cgccgataatcctccctgtagaacttatcaca--gaagtgctttctttccttcctgtgaaatctctgatgcgaatgaagtgc 418  Q
    ||||||||||||||||||  |||||||||| |  |||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  10206311 cgccgataatcctccctgacgaacttatcatatagaagtgctttctttccttcccgtgaaatctctaatgcgactgaagtgc 10206230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 18470068 - 18470122
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||||||||     ||||||||||||||||||| |||||||||||    
T  18470068 tagttaagggaccaaagcgatatc-----aattaaatagttaagggaccaaaagagcatt 18470122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 2970815 - 2970869
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  2970815 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 2970869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 4602815 - 4602869
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  4602815 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 4602869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 11713995 - 11714049
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||||||||||||     ||||||||||||||| |||||| ||||    
T  11713995 tagttaagggaccaaagcgatatcaatt-----aaatagttaagggaccaaaagaacatt 11714049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 165
Target Start/End: Complemental strand, 14287891 - 14287860
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaat 165  Q
    ||||||||||||||||||||||||||||||||    
T  14287891 tagttaagggaccaaagcgatatcaattaaat 14287860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 31557151 - 31557097
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  31557151 tagttaagggaccaaagcgatacc-----aattaaatagttaagggactaaaagagcatt 31557097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 32194502 - 32194448
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  32194502 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 32194448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 32194827 - 32194881
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  32194827 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 32194881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 34618520 - 34618574
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  34618520 tagttaagggaccaaagcgatacc-----aattaaatagttaagggactaaaagagcatt 34618574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 39109501 - 39109566
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaa 203  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| || |||||| ||||||||||||    
T  39109501 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaatagagcatttaagccttaaa 39109566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 633
Target Start/End: Complemental strand, 10206064 - 10206024
Alignment:
Q  593 atcacctttaccgaagatccttactataatttgaaggataa 633  Q
    |||||| |||||||||||||||||||| | |||||||||||    
T  10206064 atcacccttaccgaagatccttactatcaattgaaggataa 10206024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 26424825 - 26424876
Alignment:
Q  137 ttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  26424825 ttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 26424876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 2620302 - 2620244
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||| |||||||||||    
T  2620302 tagttaagggaccaaagcgataccaattaaa-tatatagttaagggaccaaaagagcatt 2620244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 2221654 - 2221587
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaata 205  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| ||||||||| ||||||||||||||    
T  2221654 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatttaagccttaaata 2221587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 762169 - 762223
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||||||||     ||||||||||||||||||| |||||||||||    
T  762169 tagttaagggaccaaagcgatatc-----aattaaatagttaagggaccaaaagagcatt 762223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 45123280 - 45123214
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaat 204  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| ||||||||| |||||||||||||    
T  45123280 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatttaagccttaaat 45123214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 22595143 - 22595199
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||||||| |||   ||||| ||||||||| |||||||||||    
T  22595143 tagttaagggaccaaagcgatatcaaataa---aaatatttaagggaccaaaagagcatt 22595199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 26060166 - 26060102
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaa 202  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| ||||||||| |||||||||||    
T  26060166 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatttaagccttaa 26060102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 761453 - 761399
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  761453 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 761399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 2221964 - 2222018
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  2221964 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 2222018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 7116532 - 7116478
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  7116532 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 7116478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 9739783 - 9739837
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  9739783 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 9739837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 11713260 - 11713206
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  11713260 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 11713206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 13089498 - 13089444
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  13089498 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 13089444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 22013522 - 22013468
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  22013522 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 22013468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 27786483 - 27786537
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  27786483 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 27786537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 31445729 - 31445675
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  31445729 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 31445675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 41154677 - 41154623
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  41154677 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 41154623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 41155012 - 41155066
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  41155012 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 41155066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 42193839 - 42193785
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  42193839 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 42193785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 165
Target Start/End: Complemental strand, 45433814 - 45433783
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaat 165  Q
    ||||||||||||||||||||||||||||||||    
T  45433814 tagttaagggaccaaagcgatatcaattaaat 45433783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 41836554 - 41836499
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||| ||||||||||| |||||||||    |||||||||||| |||||||||||    
T  41836554 tagttaagggtccaaagcgataccaattaaat----tagttaagggactaaaagagcatt 41836499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 43633587 - 43633654
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaata 205  Q
    |||||||||||||||||||||| |     ||||||||||||||||||  ||||| ||| ||||||||||||||    
T  43633587 tagttaagggaccaaagcgatacc-----aattaaatagttaagggatcaaaagtgcatttaagccttaaata 43633654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000006; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 1098113 - 1098047
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaat 204  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| ||||||||| |||||||||||||    
T  1098113 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatttaagccttaaat 1098047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 26673121 - 26673175
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||||||||     ||||||||||||||||||| |||||||||||    
T  26673121 tagttaagggaccaaagcgatatc-----aattaaatagttaagggaccaaaagagcatt 26673175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 28505071 - 28505125
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||||||||     ||||||||||||||||||| |||||||||||    
T  28505071 tagttaagggaccaaagcgatatc-----aattaaatagttaagggaccaaaagagcatt 28505125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 41845870 - 41845924
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||||||||     ||||||||||||||||||| |||||||||||    
T  41845870 tagttaagggaccaaagcgatatc-----aattaaatagttaagggaccaaaagagcatt 41845924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 41610187 - 41610123
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaa 202  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| ||||||||| |||||||||||    
T  41610187 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatttaagccttaa 41610123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 17475881 - 17475944
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagcctta 201  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| ||||||||| ||||||||||    
T  17475881 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatttaagcctta 17475944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 165
Target Start/End: Original strand, 9181946 - 9181977
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaat 165  Q
    ||||||||||||||||||||||||||||||||    
T  9181946 tagttaagggaccaaagcgatatcaattaaat 9181977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 17475457 - 17475403
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  17475457 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 17475403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 20614614 - 20614668
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  20614614 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 20614668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 25618496 - 25618442
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  25618496 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 25618442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 31488038 - 31487984
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  31488038 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 31487984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 34237541 - 34237487
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  34237541 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 34237487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 42369507 - 42369561
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  42369507 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 42369561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 46058755 - 46058701
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  46058755 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 46058701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 48453693 - 48453639
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  48453693 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 48453639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 48454003 - 48454057
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||| ||||||     ||||||||||||||||||| |||||||||||    
T  48454003 tagttaagggaccaaagtgatatc-----aattaaatagttaagggaccaaaagagcatt 48454057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 165
Target Start/End: Complemental strand, 52574735 - 52574704
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaat 165  Q
    ||||||||||||||||||||||||||||||||    
T  52574735 tagttaagggaccaaagcgatatcaattaaat 52574704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 56271214 - 56271268
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  56271214 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 56271268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 11649565 - 11649510
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||| ||||||||||| |||||||||    |||||||||||| |||||||||||    
T  11649565 tagttaagggtccaaagcgataccaattaaat----tagttaagggactaaaagagcatt 11649510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 24045425 - 24045356
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaataaa 207  Q
    |||||||| ||||||||||||| |     ||||||||||||||||||| ||||||||| |||||||| |||||||    
T  24045425 tagttaagagaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatttaagcctaaaataaa 24045356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 43291959 - 43292028
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaataaa 207  Q
    ||||||||||||||||| |||| |     ||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  43291959 tagttaagggaccaaagtgatacc-----aattaaatagttaagggaccaaaagagcatttaagcctttaataaa 43292028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Complemental strand, 11971909 - 11971848
Alignment:
Q  346 aatcctccctgtagaacttatcacagaagtgctttctttccttcctgtgaaatctctgatgc 407  Q
    |||||||||||  || |||||| ||||||||||||| |||||||| || |||||||| ||||    
T  11971909 aatcctccctgacgagcttatcgcagaagtgctttccttccttccggtcaaatctctcatgc 11971848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 46307616 - 46307548
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaataa 206  Q
    ||||||||||| |||||||||| |     ||||||||||||||||||| ||||||||| ||||||||| |||||    
T  46307616 tagttaagggatcaaagcgatacc-----aattaaatagttaagggaccaaaagagcatttaagcctttaataa 46307548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 14525935 - 14526002
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaata 205  Q
    |||||||||||||||||||||| |     ||||||||||||||||||  ||||||||| ||||||||| ||||    
T  14525935 tagttaagggaccaaagcgatacc-----aattaaatagttaagggatcaaaagagcatttaagcctttaata 14526002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000006; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 46448739 - 46448805
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaat 204  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| ||||||||| |||||||||||||    
T  46448739 tagttaagggaccaaagcgatacc-----aattaaatagttaagggactaaaagagcatttaagccttaaat 46448805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 3798384 - 3798321
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagcctta 201  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| ||||||||| ||||||||||    
T  3798384 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatttaagcctta 3798321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 50227912 - 50227975
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagcctta 201  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| ||||||||| ||||||||||    
T  50227912 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatttaagcctta 50227975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 3798708 - 3798762
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  3798708 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 3798762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 165
Target Start/End: Complemental strand, 14244226 - 14244195
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaat 165  Q
    ||||||||||||||||||||||||||||||||    
T  14244226 tagttaagggaccaaagcgatatcaattaaat 14244195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 14244558 - 14244612
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  14244558 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 14244612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 24370175 - 24370121
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  24370175 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 24370121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 31488085 - 31488031
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  31488085 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 31488031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 34023572 - 34023626
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  34023572 tagttaagggaccaaagcgatacc-----aattaaatagttaagggactaaaagagcatt 34023626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 37483114 - 37483060
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  37483114 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 37483060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 37483541 - 37483595
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  37483541 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 37483595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 38980052 - 38980106
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  38980052 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 38980106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 44114516 - 44114570
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  44114516 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 44114570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 45678772 - 45678718
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  45678772 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 45678718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 46448277 - 46448223
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  46448277 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 46448223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 50138555 - 50138501
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  50138555 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 50138501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 49548606 - 49548663
Alignment:
Q  135 agttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||| |||||| ||||| ||||||| ||||||||||||||||  |||||||||||    
T  49548606 agttaaggaaccaaaacgataccaattaa-ttaaatagttaagggatcaaaagagcatt 49548663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 50227575 - 50227510
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagccttaaa 203  Q
    |||||||||| ||||||||||| |     ||||||||||||||||||| ||||||||| ||||||||||||    
T  50227575 tagttaaggggccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatttaagccttaaa 50227510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 6714704 - 6714755
Alignment:
Q  137 ttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  6714704 ttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 6714755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 15073475 - 15073412
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagcctta 201  Q
    |||||||||||||||||||||| |     ||||||||||||||||||  ||||||||| ||||||||||    
T  15073475 tagttaagggaccaaagcgatacc-----aattaaatagttaagggatcaaaagagcatttaagcctta 15073412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 165
Target Start/End: Complemental strand, 124997 - 124966
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaat 165  Q
    ||||||||||||||||||||||||||||||||    
T  124997 tagttaagggaccaaagcgatatcaattaaat 124966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 1535 - 1481
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  1535 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 1481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 283172 - 283226
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  283172 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 283226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.00000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 14527515 - 14527569
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  14527515 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 14527569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 17383795 - 17383741
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  17383795 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 17383741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 21271546 - 21271492
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  21271546 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 21271492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 21272117 - 21272171
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  21272117 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 21272171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 22498765 - 22498819
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  22498765 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 22498819  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 26392843 - 26392897
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  26392843 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 26392897  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 31739913 - 31739967
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  31739913 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 31739967  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 34751939 - 34751995
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcattaa 195  Q
    ||||||||||||||||  ||||||||||     ||||||||||||||| |||||||||||||    
T  34751939 tagttaagggaccaaaatgatatcaatt-----aaatagttaagggaccaaaagagcattaa 34751995  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 9424906 - 9424969
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca-ttaagcctta 201  Q
    |||||||||||||||||||||| |     |||||||||||||||| || ||||||||| ||||||||||    
T  9424906 tagttaagggaccaaagcgatacc-----aattaaatagttaaggcaccaaaagagcatttaagcctta 9424969  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 17383934 - 17383985
Alignment:
Q  137 ttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    ||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  17383934 ttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 17383985  T

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Target: chr3 (Bit Score: 32; Significance: 0.00000002; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 12739938 - 12739884
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  12739938 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 12739884  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 12740024 - 12739970
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  12740024 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 12739970  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 24242995 - 24243049
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  24242995 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 24243049  T

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Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 45940275 - 45940221
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagcatt 193  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||||    
T  45940275 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagcatt 45940221  T

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Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 165
Target Start/End: Complemental strand, 48946237 - 48946206
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaat 165  Q
    ||||||||||||||||||||||||||||||||    
T  48946237 tagttaagggaccaaagcgatatcaattaaat 48946206  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 27990270 - 27990322
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca 191  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||    
T  27990270 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagca 27990322  T

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Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 40503730 - 40503782
Alignment:
Q  134 tagttaagggaccaaagcgatatcaattaaattaaatagttaagggacgaaaagagca 191  Q
    |||||||||||||||||||||| |     ||||||||||||||||||| |||||||||    
T  40503730 tagttaagggaccaaagcgatacc-----aattaaatagttaagggaccaaaagagca 40503782  T

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Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 588318 - 588282
Alignment:
Q  129 ttaaatagttaagggaccaaagcgatatcaattaaat 165  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  588318 ttaaatagttaagggaccaaaacgatattaattaaat 588282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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