View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8182_high_5 (Length: 233)
Name: NF8182_high_5
Description: NF8182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8182_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 36549649 - 36549437
Alignment:
| Q |
1 |
agtgtgaatatgttattttcgaaaggttctgtctataaaagacttggtaattgagtgagtcaattgactccacctcccttttatgtgaacatctcttgtg |
100 |
Q |
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| T |
36549649 |
agtgtgaatatgttattttggaaaggttctgtctataaaagacttggtaattgagtgagtcc-ttgactccacctcccttttatgcgaacatctcttgtg |
36549551 |
T |
|
| Q |
101 |
catagttaatgcatgaatacaattgcaatcagaatgtttgttgagatgtttgagctagagaatattaacataagaattattttttgtttgaggacgatac |
200 |
Q |
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||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
36549550 |
catagttaacgcatgaatacaattgcaatcagaacgtttgttgtgatgtttgagctagagaatattaacataagaatcattttttgtttgaggacgatac |
36549451 |
T |
|
| Q |
201 |
aatcaagattaaac |
214 |
Q |
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|||||||||||||| |
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| T |
36549450 |
aatcaagattaaac |
36549437 |
T |
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