View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8184_low_10 (Length: 247)
Name: NF8184_low_10
Description: NF8184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8184_low_10 |
 | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 18699378 - 18699210
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18699378 |
gacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
18699279 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattcttg |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
18699278 |
tctgaccgaagctgctaacttgtccggctaccattttagttctgggtactcctctttacttaattcttg |
18699210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 18731482 - 18731314
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
18731482 |
gacatcaaagtgggagttatggtgaacatctcactaagcacaaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggc |
18731383 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattcttg |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
18731382 |
tctgaccgaagctgctaacttgtccggctaccattttagtcatgggtactcctctttacttaattcttg |
18731314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 18724063 - 18723895
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
18724063 |
gacaccaaagtgggagttatggtgaacatctcactaagcacaaaatgagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggc |
18723964 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattcttg |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18723963 |
tctgaccgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattcttg |
18723895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 18679545 - 18679377
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
18679545 |
gacatcaaagtggtagttatggtgaacatctcactaatcactgaaagagtttccaaaataacaataaaaacatggagcggttgcatcaatggaagttagc |
18679446 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattcttg |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18679445 |
tctgaccgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattcttg |
18679377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 18655455 - 18655290
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
18655455 |
gacatcaaactggaagttatggtgaacatctcactaagcacagaaagaatttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggc |
18655356 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattc |
180 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
18655355 |
tctgaccgaagctgctaacttgtccggctaccattctagtcctgggtactcctcttcacttaattc |
18655290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 133; Significance: 3e-69; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 268335 - 268167
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| || |
|
|
| T |
268335 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaagagagtttccaaaatagcaagaaaaacatggagcggttgcatcaatggaagttggc |
268236 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattcttg |
183 |
Q |
| |
|
||||||| ||||| |||||||||| |||||||||| ||||| |||||||| |||||||||||||||||| |
|
|
| T |
268235 |
tctgacccaagcttctaacttgtctggctaccattctagtcgtgggtactgctctttacttaattcttg |
268167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 28127646 - 28127509
Alignment:
| Q |
26 |
gggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaag |
125 |
Q |
| |
|
||||||||||||||| | || ||||||| | | |||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||| ||| |
|
|
| T |
28127646 |
gggagttatggtgaagagcttgctaagcatggagagaggttccaaaataacaagaaaaacatggagcgattgcaccaatggaagatagctctaacccaag |
28127547 |
T |
|
| Q |
126 |
ctgctaacttgtccggctaccattttagtcctgggtac |
163 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
28127546 |
ctgctaacttgtccggctaccattatagtccagggtac |
28127509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 28164330 - 28164193
Alignment:
| Q |
26 |
gggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaag |
125 |
Q |
| |
|
||||||||||| || |||| |||||||| | |||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||| ||| |
|
|
| T |
28164330 |
gggagttatggcaaagatcttactaagcatggtgagaggttccaaaataacaagaaaaacatggagcgattgcaccaatggaagatagctctaacccaag |
28164231 |
T |
|
| Q |
126 |
ctgctaacttgtccggctaccattttagtcctgggtac |
163 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
28164230 |
ctgctaacttgtccggctaccattatagtccagggtac |
28164193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 29273761 - 29273596
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
29273761 |
gacatcaaagtgggagttatggtgaacatctcactaagtacgaagagagtttccaaaatagcaagaaaaacatggatcggttgcatcaatggaagttggc |
29273662 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattc |
180 |
Q |
| |
|
||||||| ||||| |||||||||| |||||||||| ||||| |||||||| ||||||||||||||| |
|
|
| T |
29273661 |
tctgacccaagcttctaacttgtctggctaccattctagtcatgggtactgctctttacttaattc |
29273596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 121; Significance: 4e-62; HSPs: 30)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 26646677 - 26646837
Alignment:
| Q |
17 |
catcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| || ||||||||||||||||| |||| |
|
|
| T |
26646677 |
catcaaagtgggagttatggtgaacatctcactaagcacgaagagagtttccaaaataacaagaaaaacaaggaacgattgcatcaatggaagttggctc |
26646776 |
T |
|
| Q |
117 |
tgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaa |
177 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||| ||||||||||||| || |||||||||| |
|
|
| T |
26646777 |
tgacccaagctgctaacttgtccggataccattatagtcctgggtaccccactttacttaa |
26646837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 26752645 - 26752805
Alignment:
| Q |
17 |
catcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| || ||||||||||||||||| |||| |
|
|
| T |
26752645 |
catcaaagtgggagttatggtgaacatctcactaagcacgaagagagtttccaaaataacaagaaaaacaaggaacgattgcatcaatggaagttggctc |
26752744 |
T |
|
| Q |
117 |
tgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaa |
177 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||| ||||||||||||| || |||||||||| |
|
|
| T |
26752745 |
tgacccaagctgctaacttgtccggataccattatagtcctgggtaccccactttacttaa |
26752805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 177
Target Start/End: Original strand, 25579915 - 25580080
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
||||||| ||||||||||||||||| |||| |||||||| ||| |||| || ||||||||| |||||||||||||||| |||| |||||||||| |||| |
|
|
| T |
25579915 |
gacatcagagtgggagttatggtgagtatcttactaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtcaatggaagatagc |
25580014 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcc---tgggtactcctctttacttaa |
177 |
Q |
| |
|
||| ||| |||||||||||||||||||||| |||| |||||| ||||||| || |||||||||| |
|
|
| T |
25580015 |
tcttacccaagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaa |
25580080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 25538736 - 25538907
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
||||||| ||||||||||||||||| ||| | |||||||| ||| |||| || |||||||| |||||||||||||||| |||| |||||||||| |||| |
|
|
| T |
25538736 |
gacatcagagtgggagttatggtgagcattttactaagcatgaagagaggtttcaaaataatgagaaaaacatggagcgattgcgtcaatggaagatagc |
25538835 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcc---tgggtactcctctttacttaattcttg |
183 |
Q |
| |
|
||| | | |||||||||||||||||||||| |||| |||||| ||||||| || |||||||||| ||||| |
|
|
| T |
25538836 |
tcttatccaagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaatcttg |
25538907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 26143064 - 26143226
Alignment:
| Q |
18 |
atcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctct |
117 |
Q |
| |
|
|||| ||||||| ||||||||| ||||| |||||||| ||| |||| || ||||||||| |||||||||||||||| |||| |||||||||| ||||||| |
|
|
| T |
26143064 |
atcagagtgggatttatggtgagcatcttactaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtcaatggaagatagctct |
26143163 |
T |
|
| Q |
118 |
gaccaaagctgctaacttgtccggctaccattttagtcc---tgggtactcctctttacttaa |
177 |
Q |
| |
|
| | |||||||||||||||||||||| |||| |||||| ||||||| || |||||||||| |
|
|
| T |
26143164 |
tatccaagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaa |
26143226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 26656185 - 26656353
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
||||||| | ||| ||||| ||||| ||||| |||||||| ||||||| ||||||||||||||| |||||||| || ||||| | ||||||||| | || |
|
|
| T |
26656185 |
gacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggc |
26656284 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattcttg |
183 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||| |||||| || |||||||||| ||||| |
|
|
| T |
26656285 |
tctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactttacttaaatcttg |
26656353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 26762156 - 26762324
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
||||||| | ||| ||||| ||||| ||||| |||||||| ||||||| ||||||||||||||| |||||||| || ||||| | ||||||||| | || |
|
|
| T |
26762156 |
gacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggc |
26762255 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattcttg |
183 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||| |||||| || |||||||||| ||||| |
|
|
| T |
26762256 |
tctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactttacttaaatcttg |
26762324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 28786515 - 28786638
Alignment:
| Q |
56 |
gaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattttagtc |
155 |
Q |
| |
|
|||||||| || |||||| | ||| | ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
28786515 |
gaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtc |
28786614 |
T |
|
| Q |
156 |
ctgggtactcctctttacttaatt |
179 |
Q |
| |
|
|||||||| || ||||||||||| |
|
|
| T |
28786615 |
ctgggtacgactatttacttaatt |
28786638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 26056122 - 26056264
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| |||||||| || || | |||||||||||| |||||||||||||||| |||| |||||||||| | || |
|
|
| T |
26056122 |
gacatcagagtgggagttatggtgagcatcttactaagcataaagaggggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggc |
26056221 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcct |
157 |
Q |
| |
|
||| || |||||||||||||||||||||| |||| ||||||| |
|
|
| T |
26056222 |
tcttactcaagctgctaacttgtccggctatcattatagtcct |
26056264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 26076092 - 26076234
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| |||||||| || || | |||||||||||| |||||||||||||||| |||| |||||||||| | || |
|
|
| T |
26076092 |
gacatcagagtgggagttatggtgagcatcttactaagcataaagaggggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggc |
26076191 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcct |
157 |
Q |
| |
|
||| || |||||||||||||||||||||| |||| ||||||| |
|
|
| T |
26076192 |
tcttactcaagctgctaacttgtccggctatcattatagtcct |
26076234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 27338056 - 27337893
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
||||||| | ||||||||||||||| ||||| |||||||| ||| | | ||||||||||||||| ||||||||||| ||||| | |||||||| | || |
|
|
| T |
27338056 |
gacatcagactgggagttatggtgagcatcttactaagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggc |
27337957 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaat |
178 |
Q |
| |
|
||| ||| ||||||||||||| |||||| |||||||||||| |||||| || ||||||||||| |
|
|
| T |
27337956 |
tcttacccaagctgctaacttctccggccaccattttagtcaagggtaccccactttacttaat |
27337893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 27398796 - 27398633
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
||||||| | ||||||||||||||| ||||| |||||||| ||| | | ||||||||||||||| ||||||||||| ||||| | |||||||| | || |
|
|
| T |
27398796 |
gacatcagactgggagttatggtgagcatcttactaagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggc |
27398697 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaat |
178 |
Q |
| |
|
||| ||| ||||||||||||| |||||| |||||||||||| |||||| || ||||||||||| |
|
|
| T |
27398696 |
tcttacccaagctgctaacttctccggccaccattttagtcaagggtaccccactttacttaat |
27398633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 28781376 - 28781499
Alignment:
| Q |
56 |
gaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattttagtc |
155 |
Q |
| |
|
|||||||| || |||||| | ||| | ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
28781376 |
gaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtc |
28781475 |
T |
|
| Q |
156 |
ctgggtactcctctttacttaatt |
179 |
Q |
| |
|
|||||||| | ||||||||||| |
|
|
| T |
28781476 |
ctgggtacgacaatttacttaatt |
28781499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 163
Target Start/End: Original strand, 28792636 - 28792743
Alignment:
| Q |
56 |
gaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattttagtc |
155 |
Q |
| |
|
|||||||| || |||||| | ||| | ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
28792636 |
gaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtc |
28792735 |
T |
|
| Q |
156 |
ctgggtac |
163 |
Q |
| |
|
|||||||| |
|
|
| T |
28792736 |
ctgggtac |
28792743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 25481952 - 25482080
Alignment:
| Q |
29 |
agttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctg |
128 |
Q |
| |
|
|||||||||||| |||| |||||||| ||| || | |||||||||||| |||||||||||||||| |||| |||||||||| | ||||| || |||||| |
|
|
| T |
25481952 |
agttatggtgaatatctgactaagcatgaagaggggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctg |
25482051 |
T |
|
| Q |
129 |
ctaacttgtccggctaccattttagtcct |
157 |
Q |
| |
|
|||| ||||||||||| |||| ||||||| |
|
|
| T |
25482052 |
ctaatttgtccggctatcattatagtcct |
25482080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 157
Target Start/End: Original strand, 27214649 - 27214758
Alignment:
| Q |
48 |
ctaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctacca |
147 |
Q |
| |
|
||||||| ||| |||| || |||||||||||| ||||||||||||||||||| |||||||| ||||||| | | ||||||||||||| || ||||| || |
|
|
| T |
27214649 |
ctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagctgctaacttatctggctatca |
27214748 |
T |
|
| Q |
148 |
ttttagtcct |
157 |
Q |
| |
|
|| ||||||| |
|
|
| T |
27214749 |
ttatagtcct |
27214758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 27234579 - 27234470
Alignment:
| Q |
48 |
ctaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctacca |
147 |
Q |
| |
|
||||||| ||| |||| || |||||||||||| ||||||||||||||||||| |||||||| ||||||| | | ||||||||||||| || ||||| || |
|
|
| T |
27234579 |
ctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagctgctaacttatctggctatca |
27234480 |
T |
|
| Q |
148 |
ttttagtcct |
157 |
Q |
| |
|
|| ||||||| |
|
|
| T |
27234479 |
ttatagtcct |
27234470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 26824036 - 26824184
Alignment:
| Q |
15 |
gacatcaaagtgggagttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagc |
114 |
Q |
| |
|
||||||| |||||||||||| | ||||||||||||||| |||||||| ||| |||||||||| ||||||||||| |||| |||||||||| || |
|
|
| T |
26824036 |
gacatcagcgtgggagttatgctatacatctcactaagcatgaaaagaggttcggaaataacaaggaaaacatggagaaattgcttcaatggaagaaggc |
26824135 |
T |
|
| Q |
115 |
tctgaccaaagctgctaacttgtccggctaccattttagtcctgggtac |
163 |
Q |
| |
|
||||| |||||||| ||||||| |||| |||||||||| ||||||| |
|
|
| T |
26824136 |
tctgaaacaagctgctgacttgtctggctttcattttagtcttgggtac |
26824184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 26949890 - 26950005
Alignment:
| Q |
48 |
ctaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctacca |
147 |
Q |
| |
|
||||||| ||| |||| |||||||| | ||| ||||||||||||||||||| |||||||| ||||||||| ||||| |||| |||| || |||||||| |
|
|
| T |
26949890 |
ctaagcatgaagagaggttccaaaagagcaaaaaaaacatggagcggttgctgaaatggaagatagctctgaacaaagttgctgacttatctggctacca |
26949989 |
T |
|
| Q |
148 |
ttttagtcctgggtac |
163 |
Q |
| |
|
||| | || ||||||| |
|
|
| T |
26949990 |
tttcaatcttgggtac |
26950005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 26861877 - 26861957
Alignment:
| Q |
83 |
aacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattttagtcctgggtac |
163 |
Q |
| |
|
||||||||| ||||||| |||||| | ||||||| | |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
26861877 |
aacatggagaggttgcagagatggaaagttgctctgaaccaagctgctaacttgtcaggctaccattttagtcctgggtac |
26861957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 27718334 - 27718228
Alignment:
| Q |
51 |
agcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattt |
150 |
Q |
| |
|
|||| |||||||| || |||||| | ||||| ||||||||| ||||||| | |||||| | ||||||| | | |||||||||||||||||||||||| |
|
|
| T |
27718334 |
agcatgaaaagaggtttcaaaatgataagaataacatggagaggttgcagcgatggaaagtggctctgagccaggctgctaacttgtccggctaccatga |
27718235 |
T |
|
| Q |
151 |
tagtcct |
157 |
Q |
| |
|
||||||| |
|
|
| T |
27718234 |
tagtcct |
27718228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 25506961 - 25506852
Alignment:
| Q |
29 |
agttatggtgaacatctcactaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctg |
128 |
Q |
| |
|
|||||||||||| |||| |||||||| ||| ||| || |||||||| ||||||||||||||| | | |||||||||||| ||||||| || || ||| |
|
|
| T |
25506961 |
agttatggtgaagatctgactaagcatgaagagaagtttcaaaataataagaaaaacatggagagatcgcatcaatggaaaatagctctaacacaatctg |
25506862 |
T |
|
| Q |
129 |
ctaacttgtc |
138 |
Q |
| |
|
||||| |||| |
|
|
| T |
25506861 |
ctaacctgtc |
25506852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 26617868 - 26617953
Alignment:
| Q |
65 |
ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattt |
150 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |||||||| ||||||| | | ||||| |||||| || ||||| ||||| |
|
|
| T |
26617868 |
ttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcattt |
26617953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 26723796 - 26723881
Alignment:
| Q |
65 |
ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattt |
150 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |||||||| ||||||| | | ||||| |||||| || ||||| ||||| |
|
|
| T |
26723796 |
ttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcattt |
26723881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 26884473 - 26884523
Alignment:
| Q |
127 |
tgctaacttgtccggctaccattttagtcctgggtactcctctttacttaa |
177 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| || |||||||||| |
|
|
| T |
26884473 |
tgctaacttgtccggctaccattttagtcttgggtatcccactttacttaa |
26884523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 26811755 - 26811807
Alignment:
| Q |
65 |
ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctct |
117 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||| |||||||| ||||||| |
|
|
| T |
26811755 |
ttccaaaataacaaggaaaacatggatcggttgcagaaatggaagatagctct |
26811807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 26959415 - 26959519
Alignment:
| Q |
68 |
caaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcct |
167 |
Q |
| |
|
||||||| |||| |||||||||||||||||| |||||||| |||||| | | ||||||||||||| || ||| ||||||| | || ||||||| | | |
|
|
| T |
26959415 |
caaaatagcaaggaaaacatggagcggttgctgaaatggaagaaagctcttaaccaagctgctaacttatctggccaccatttcaatcttgggtaccctt |
26959514 |
T |
|
| Q |
168 |
cttta |
172 |
Q |
| |
|
||||| |
|
|
| T |
26959515 |
cttta |
26959519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 163
Target Start/End: Complemental strand, 28297654 - 28297556
Alignment:
| Q |
65 |
ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattttagtcctgggtac |
163 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||| |||||||| ||||| || || |||||||||| || ||| ||||||| | |||| ||||| |
|
|
| T |
28297654 |
ttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtac |
28297556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 28514419 - 28514517
Alignment:
| Q |
65 |
ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattttagtcctgggtac |
163 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||| |||||||| ||||| || || |||||||||| || ||| ||||||| | |||| ||||| |
|
|
| T |
28514419 |
ttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtac |
28514517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 26975301 - 26975405
Alignment:
| Q |
68 |
caaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattttagtcctgggtactcct |
167 |
Q |
| |
|
|||||||| || ||||| |||||||||||| | |||||||| |||||| | | ||||||||||||| || ||| ||||||| | || ||||||| | | |
|
|
| T |
26975301 |
caaaataaaaatgaaaacttggagcggttgcttaaatggaagaaagctcttaaccaagctgctaacttatctggccaccatttcaatcttgggtaccctt |
26975400 |
T |
|
| Q |
168 |
cttta |
172 |
Q |
| |
|
||||| |
|
|
| T |
26975401 |
cttta |
26975405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 51 - 179
Target Start/End: Complemental strand, 4626 - 4498
Alignment:
| Q |
51 |
agcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattt |
150 |
Q |
| |
|
|||| |||||||| || |||||| | ||||| ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4626 |
agcatgaaaagaggtttcaaaatgataagaataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattc |
4527 |
T |
|
| Q |
151 |
tagtcctgggtactcctctttacttaatt |
179 |
Q |
| |
|
||||| ||||||| ||| ||||||||||| |
|
|
| T |
4526 |
tagtcatgggtacgcctatttacttaatt |
4498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 13582 - 13459
Alignment:
| Q |
56 |
gaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattttagtc |
155 |
Q |
| |
|
|||||||| || |||||| | ||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
13582 |
gaaaagaggtttcaaaatgataagaataacatggagcgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtc |
13483 |
T |
|
| Q |
156 |
ctgggtactcctctttacttaatt |
179 |
Q |
| |
|
||||||| || ||||||||||| |
|
|
| T |
13482 |
atgggtacgactatttacttaatt |
13459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 7762 - 7885
Alignment:
| Q |
56 |
gaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattttagtc |
155 |
Q |
| |
|
|||||||| || |||||| | ||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
7762 |
gaaaagaggtttcaaaatgataagaataacatggagcgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtc |
7861 |
T |
|
| Q |
156 |
ctgggtactcctctttacttaatt |
179 |
Q |
| |
|
||||||| || ||||||||||| |
|
|
| T |
7862 |
atgggtacgactatttacttaatt |
7885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 3346 - 3269
Alignment:
| Q |
80 |
aaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattttagtcct |
157 |
Q |
| |
|
|||||||||||| ||||||| | |||||| | ||||||| | | |||||||||||||||||||||||| ||||||| |
|
|
| T |
3346 |
aaaaacatggagaggttgcagcgatggaaagtggctctgagccaggctgctaacttgtccggctaccatgatagtcct |
3269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 3279967 - 3280047
Alignment:
| Q |
83 |
aacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctaccattttagtcctgggtac |
163 |
Q |
| |
|
|||||| || |||||||| |||||||| | ||||| | | |||| ||||||||||||||| ||||||||| |||| ||||| |
|
|
| T |
3279967 |
aacatgaagaggttgcataaatggaagatggctcttaaccaagcagctaacttgtccggccaccattttaatcctaggtac |
3280047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 172
Target Start/End: Complemental strand, 17993642 - 17993518
Alignment:
| Q |
48 |
ctaagcacgaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccaaagctgctaacttgtccggctacca |
147 |
Q |
| |
|
||||||| ||| || |||| ||||||| |||| ||||||||||||||||| |||||||| |||||| | | ||||||||||||| || ||| |||| |
|
|
| T |
17993642 |
ctaagcatgaagagggttttcaaaatagcaaggaaaacatggagcggttgttgaaatggaagaaagctcttaaccaagctgctaacttatctggccacca |
17993543 |
T |
|
| Q |
148 |
ttttagtcctgggtactcctcttta |
172 |
Q |
| |
|
||| | || |||||||| |||||| |
|
|
| T |
17993542 |
tttcaatcaagggtactcatcttta |
17993518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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