View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8184_low_3 (Length: 402)

Name: NF8184_low_3
Description: NF8184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8184_low_3
NF8184_low_3
[»] chr1 (9 HSPs)
chr1 (16-382)||(36754794-36755160)
chr1 (100-212)||(20816895-20817006)
chr1 (96-193)||(17048058-17048155)
chr1 (99-183)||(34488588-34488672)
chr1 (96-190)||(11833671-11833765)
chr1 (100-214)||(22669024-22669138)
chr1 (115-166)||(10751556-10751607)
chr1 (115-209)||(1634920-1635014)
chr1 (85-137)||(13258054-13258106)
[»] chr8 (15 HSPs)
chr8 (96-258)||(19342158-19342320)
chr8 (96-258)||(19371656-19371818)
chr8 (108-214)||(12843488-12843594)
chr8 (96-210)||(22881699-22881813)
chr8 (98-189)||(25809562-25809653)
chr8 (139-249)||(10650312-10650422)
chr8 (96-198)||(20707146-20707248)
chr8 (99-190)||(28458049-28458138)
chr8 (115-166)||(24502368-24502419)
chr8 (127-204)||(17872012-17872089)
chr8 (99-172)||(15610249-15610322)
chr8 (96-216)||(5346072-5346191)
chr8 (100-156)||(10516419-10516475)
chr8 (108-172)||(15748418-15748482)
chr8 (96-168)||(15753132-15753204)
[»] chr3 (7 HSPs)
chr3 (50-254)||(23528299-23528503)
chr3 (100-204)||(4596840-4596944)
chr3 (115-198)||(9796540-9796623)
chr3 (93-166)||(9828934-9829006)
chr3 (104-172)||(2906526-2906594)
chr3 (96-204)||(4698583-4698691)
chr3 (122-198)||(17034132-17034208)
[»] chr2 (13 HSPs)
chr2 (54-245)||(16748014-16748203)
chr2 (96-210)||(24386337-24386451)
chr2 (115-210)||(27483804-27483899)
chr2 (117-214)||(21538453-21538550)
chr2 (121-219)||(12061203-12061302)
chr2 (96-166)||(13896937-13897006)
chr2 (96-166)||(14037554-14037623)
chr2 (100-190)||(18115082-18115172)
chr2 (128-214)||(22108280-22108366)
chr2 (99-185)||(35511828-35511914)
chr2 (176-209)||(24109118-24109151)
chr2 (111-204)||(31851192-31851285)
chr2 (122-198)||(22311211-22311287)
[»] chr7 (16 HSPs)
chr7 (96-246)||(11739526-11739676)
chr7 (101-213)||(39199758-39199872)
chr7 (107-224)||(23662258-23662375)
chr7 (104-171)||(3316119-3316186)
chr7 (99-214)||(6414881-6414996)
chr7 (104-214)||(23183444-23183554)
chr7 (104-169)||(7681513-7681578)
chr7 (107-224)||(23655457-23655574)
chr7 (104-169)||(7666254-7666319)
chr7 (131-188)||(19650724-19650781)
chr7 (96-216)||(7144564-7144683)
chr7 (107-214)||(32561883-32561988)
chr7 (96-190)||(1675008-1675102)
chr7 (122-200)||(1783369-1783447)
chr7 (111-192)||(4122590-4122671)
chr7 (96-185)||(39227386-39227475)
[»] chr4 (12 HSPs)
chr4 (99-254)||(35150106-35150261)
chr4 (96-204)||(24715650-24715758)
chr4 (96-186)||(12285764-12285854)
chr4 (108-225)||(9736410-9736527)
chr4 (129-204)||(9883032-9883107)
chr4 (130-249)||(19601508-19601627)
chr4 (96-167)||(20748672-20748743)
chr4 (104-190)||(7221262-7221347)
chr4 (143-214)||(23692967-23693038)
chr4 (104-145)||(16300692-16300733)
chr4 (104-136)||(7224279-7224311)
chr4 (295-358)||(35150323-35150387)
[»] chr6 (3 HSPs)
chr6 (129-382)||(12869801-12870064)
chr6 (96-190)||(14761285-14761378)
chr6 (176-356)||(33546463-33546652)
[»] chr5 (8 HSPs)
chr5 (93-159)||(24558953-24559019)
chr5 (93-159)||(24599985-24600051)
chr5 (96-186)||(11848263-11848353)
chr5 (269-360)||(15990752-15990843)
chr5 (130-216)||(18807449-18807535)
chr5 (146-247)||(17771693-17771794)
chr5 (145-214)||(16687129-16687198)
chr5 (108-152)||(16686436-16686480)
[»] scaffold0466 (1 HSPs)
scaffold0466 (96-204)||(4317-4425)


Alignment Details
Target: chr1 (Bit Score: 339; Significance: 0; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 16 - 382
Target Start/End: Original strand, 36754794 - 36755160
Alignment:
Q  16 atgaattccatgctagacaacatttagcaacttttttaaaatacataagtttgtaaccatcgaaaaggaggagattttttaaccaaagtgggttttagaa 115  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  36754794 atgaattccatgctagacaacattcatcaacttttttaaaatacataagtttgtaaccatcgaaaagggggggattttttaaccaaagtgggttttagaa 36754893  T
Q  116 caatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgactc 215  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36754894 caatatctctaaagttttgatgataacaatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgactc 36754993  T
Q  216 tgaattcaacttgttggttctaaaacaccaagctttgaatgcatttggtaatcaagaagaagctatgatgactaaaactatgatatgaagaaagttcaac 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36754994 tgaattcaacttgttggttctaaaacaccaagctttgaatgcatttggtactcaagaagaagctatgatgactaaaactatgatatgaagaaagttcaac 36755093  T
Q  316 aaaattcaaagctctaattagaagatgcatcaagccttgaagattatgatgaaagcagactctaatg 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36755094 aaaattcaaagctctaattagaagatgcatcaagccttgaagattatgatgaaagcagactctaatg 36755160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 20816895 - 20817006
Alignment:
Q  100 aaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataa 199  Q
    |||||||||||||||||||| ||||||| ||||| ||| ||| |||||||||||||||||||| ||||| ||| | ||||| |||||||||||| |||||    
T  20816895 aaagtgggttttagaacaatgtctctaatgttttaatgataacaatgtatgaaagaacaattgaatact-taatgtgtgttgaagtgtgcaggaccataa 20816993  T
Q  200 aattatattctga 212  Q
    ||||| |||||||    
T  20816994 aattaaattctga 20817006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 17048058 - 17048155
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcagga 193  Q
    |||||||||| ||||||||||||||| ||||| |||||| || ||| ||||||||||| |||||||||||| | ||| | ||||||||||||||||||    
T  17048058 aaccaaagtgagttttagaacaatatatctaaggttttgttgataaaaatgtatgaaataacaattggatattttaatgtgtgttcaagtgtgcagga 17048155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 99 - 183
Target Start/End: Complemental strand, 34488672 - 34488588
Alignment:
Q  99 caaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaa 183  Q
    ||||||||||||||||||||| | |||| |||||||||| |||||| |||||||||||||||| |||||||||| | ||||||||    
T  34488672 caaagtgggttttagaacaatgtatctagagttttgatgataataaggtatgaaagaacaatttgatactctaatgtgtgttcaa 34488588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 11833765 - 11833671
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgca 190  Q
    |||||||||| |||||| |||||| ||||||||||||| ||| |||||| |||||||| || |||| || ||||||| | |||||||| ||||||    
T  11833765 aaccaaagtgagttttaaaacaatgtctctaaagttttaatgataataacgtatgaaaaaataatttgaaactctaatgtgtgttcaattgtgca 11833671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 22669024 - 22669138
Alignment:
Q  100 aaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataa 199  Q
    |||||||||||||||| ||| | |  || ||||| ||| ||| |||||||||||||| |||| | ||||||||    ||||||||||||||||| ||||     
T  22669024 aaagtgggttttagaataatgttttcaaggtttttatgataacaatgtatgaaagaagaatttggtactctaatatttgttcaagtgtgcaggaccatat 22669123  T
Q  200 aattatattctgact 214  Q
    ||||| ||| |||||    
T  22669124 aattaaattttgact 22669138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 10751607 - 10751556
Alignment:
Q  115 acaatatctctaaagttttgatggtaataatgtatgaaagaacaattggata 166  Q
    ||||| ||||||||||||||||| ||| || |||| ||||||||||||||||    
T  10751607 acaatgtctctaaagttttgatgataacaaagtattaaagaacaattggata 10751556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 1634920 - 1635014
Alignment:
Q  115 acaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattc 209  Q
    ||||| |||| | |||||||||| |||||| |||| |  |||||||||||||  ||||   |||||||||||||||||| |||| ||||| ||||    
T  1634920 acaatgtctccagagttttgatgataataaggtataagtgaacaattggataggctaatatgtgttcaagtgtgcaggagcatagaattaaattc 1635014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 13258054 - 13258106
Alignment:
Q  85 ggagattttttaaccaaagtgggttttagaacaatatctctaaagttttgatg 137  Q
    ||||||| || |||||||||||  ||||||||||| |||||| ||||||||||    
T  13258054 ggagattgttgaaccaaagtggactttagaacaatgtctctagagttttgatg 13258106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 96 - 258
Target Start/End: Original strand, 19342158 - 19342320
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatc 195  Q
    |||||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| | || | |||||||||||||||| | |    
T  19342158 aaccaaagtgagttttagaacaatgtctctaaagttttgatgataacaatgtatgaaagaacaattggatacacaaatgtgtgttcaagtgtgcagtacc 19342257  T
Q  196 ataaaattatattctgactctgaattcaacttgttggttctaaaacaccaagctttgaatgca 258  Q
    ||||||||| ||||| |||||||| |||||||||||||||| ||| |||||  ||||||||||    
T  19342258 ataaaattaaattctaactctgaagtcaacttgttggttctgaaataccaaaatttgaatgca 19342320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 96 - 258
Target Start/End: Original strand, 19371656 - 19371818
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatc 195  Q
    |||||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| | || | |||||||||||||||| | |    
T  19371656 aaccaaagtgagttttagaacaatgtctctaaagttttgatgataacaatgtatgaaagaacaattggatacacaaatgtgtgttcaagtgtgcagtacc 19371755  T
Q  196 ataaaattatattctgactctgaattcaacttgttggttctaaaacaccaagctttgaatgca 258  Q
    | ||||||| ||||| |||||||| ||||| |||||||| | |||||||||  ||||||||||    
T  19371756 acaaaattaaattctaactctgaagtcaacctgttggttatgaaacaccaaaatttgaatgca 19371818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 12843594 - 12843488
Alignment:
Q  108 ttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatat 207  Q
    |||||||||| | |||||| |||||||||| |||||||||||||||||| |||||||||| |||| | |||||||||||||||||| |||| ||||| ||    
T  12843594 ttttagaacagtgtctctagagttttgatgataataatgtatgaaagaataattggatacgctaatgtgtgttcaagtgtgcaggaccatataattaaat 12843495  T
Q  208 tctgact 214  Q
    |||||||    
T  12843494 tctgact 12843488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 96 - 210
Target Start/End: Complemental strand, 22881813 - 22881699
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatc 195  Q
    |||||||||| ||||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||||||| | |||||| |||||| | || |    
T  22881813 aaccaaagtgagttttagaacaatgtctctaaggttttgatgataataatatatgaaagaacaattggatactctaatgtgtgttctagtgtgtatgacc 22881714  T
Q  196 ataaaattatattct 210  Q
    ||| ||||| |||||    
T  22881713 atataattaaattct 22881699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 25809653 - 25809562
Alignment:
Q  98 ccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgc 189  Q
    |||||||||||||||||||||| ||| ||  ||||||||| ||| || |||| |||||| ||||||||||||||| | |||||| |||||||    
T  25809653 ccaaagtgggttttagaacaatgtctatatggttttgatgttaacaaagtataaaagaataattggatactctaatgtgtgttcgagtgtgc 25809562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 10650422 - 10650312
Alignment:
Q  139 taataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgactctgaattcaacttgttggttctaa 238  Q
    |||||||  |||||||||| ||||||| |||||| | |||||||  ||||| | | |||||||||| ||| ||||| |||| |||||||||||||| | |    
T  10650422 taataatcaatgaaagaacgattggatgctctaatgtgtgttcatatgtgccgaaccataaaattaaattatgactttgaagtcaacttgttggttttga 10650323  T
Q  239 aacaccaagct 249  Q
    |||||||||||    
T  10650322 aacaccaagct 10650312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 20707248 - 20707146
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatc 195  Q
    |||||||||| |||||| |||||| ||| ||| ||||  ||| ||| ||||| ||||||||||||| |||||||||| | ||||||||||||| |||| |    
T  20707248 aaccaaagtgagttttaaaacaatgtctataaggtttaaatgataacaatgtttgaaagaacaattagatactctaatgtgtgttcaagtgtgtaggacc 20707149  T
Q  196 ata 198  Q
    |||    
T  20707148 ata 20707146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 28458049 - 28458138
Alignment:
Q  99 caaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgca 190  Q
    |||||||| ||||||||||||| || ||| | ||||||||||| ||||| |||||||| |||||  |||||||| | ||||| |||||||||    
T  28458049 caaagtggattttagaacaatacctataagggtttgatggtaacaatgtgtgaaagaataattg--tactctaatgtgtgtttaagtgtgca 28458138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 24502368 - 24502419
Alignment:
Q  115 acaatatctctaaagttttgatggtaataatgtatgaaagaacaattggata 166  Q
    |||||| |||||||||||||||| |||||| |||| ||||||||||||||||    
T  24502368 acaatacctctaaagttttgatgataataaagtattaaagaacaattggata 24502419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 17872012 - 17872089
Alignment:
Q  127 aagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaatta 204  Q
    ||||||||||| ||| ||||||| ||||||||||| ||||  ||||   |||||||||| |||||||||||| |||||    
T  17872012 aagttttgatgataacaatgtataaaagaacaatttgatatgctaatttgtgttcaagtatgcaggatcatagaatta 17872089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 15610322 - 15610249
Alignment:
Q  99 caaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaa 172  Q
    ||||||||||||||||||||| ||| ||| ||||||||  ||| ||||| || |||||||| | | ||||||||    
T  15610322 caaagtgggttttagaacaatgtctataaggttttgataataaaaatgtgtgtaagaacaacttgttactctaa 15610249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 5346191 - 5346072
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatc 195  Q
    ||||||| || ||||| ||||||||||||  |||| |||||  ||  ||||||| || || ||||||||||  |||||| |||||||||| |||   | |    
T  5346191 aaccaaaatgagtttt-gaacaatatctcggaagtcttgattatatcaatgtataaaggagcaattggatatgctaacgtgtgttcaagtatgcgtaacc 5346093  T
Q  196 ataaaattatattctgactct 216  Q
    ||||||||| |||||||||||    
T  5346092 ataaaattaaattctgactct 5346072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 10516419 - 10516475
Alignment:
Q  100 aaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaa 156  Q
    |||||||||||||||||||| | | |||  |||||||| ||| ||||||||||||||    
T  10516419 aaagtgggttttagaacaatgtttataagattttgatgataacaatgtatgaaagaa 10516475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 15748482 - 15748418
Alignment:
Q  108 ttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaa 172  Q
    |||||||||||  |||||||  |||| ||| ||| ||||||||||||||||||||  ||||||||    
T  15748482 ttttagaacaaagtctctaagatttttatgataacaatgtatgaaagaacaattgcctactctaa 15748418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 15753204 - 15753132
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatact 168  Q
    ||||||| ||| |||||||||||  |||||||  |||| ||| ||| |||||||| |||||||||||| ||||    
T  15753204 aaccaaattggattttagaacaaagtctctaagatttttatgataacaatgtatgtaagaacaattgggtact 15753132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 254
Target Start/End: Original strand, 23528299 - 23528503
Alignment:
Q  50 tttaaaatacataagtttgtaaccatcgaaaa-ggaggagattttttaaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgta 148  Q
    ||||| |||||||||||| | | |||| |||| ||| |||||| || |||||||||| ||||||||||||| ||||||| ||||||||| ||| |||||     
T  23528299 tttaagatacataagtttctcatcatcaaaaaaggaagagattgttgaaccaaagtgagttttagaacaatgtctctaaggttttgatgataacaatgtc 23528398  T
Q  149 tgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgactctgaattcaacttgttggttctaaaacaccaagc 248  Q
    ||||||||||||||| |||| |||    || |||| ||||||||| |||||||||| ||| ||| |||||| |||||||||||||| | | |||||||||    
T  23528399 tgaaagaacaattgggtactataatttttgctcaa-tgtgcaggaccataaaattaaattttgaatctgaaatcaacttgttggttttgatacaccaagc 23528497  T
Q  249 tttgaa 254  Q
    | ||||    
T  23528498 tctgaa 23528503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 4596840 - 4596944
Alignment:
Q  100 aaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataa 199  Q
    |||||||||||||||| ||| ||| ||||||||  ||| | ||||| ||| |||||| | ||||||||||||| | ||||||| |||||||  | |||||    
T  4596840 aaagtgggttttagaataatgtctttaaagtttaaatgatgataatatataaaagaatatttggatactctaatgtgtgttcaggtgtgcaaaaccataa 4596939  T
Q  200 aatta 204  Q
    |||||    
T  4596940 aatta 4596944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 9796623 - 9796540
Alignment:
Q  115 acaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcata 198  Q
    ||||| ||||| ||||||||||| |||||| |||| ||||||||||||||||   |||    ||||||||||||||||||||||    
T  9796623 acaatttctctgaagttttgatgataataaagtattaaagaacaattggatatgttaatatatgttcaagtgtgcaggatcata 9796540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 9828934 - 9829006
Alignment:
Q  93 tttaaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggata 166  Q
    |||||||||| || ||||| ||||||| || |||||||||||||| ||| ||||||| ||||||||||| ||||    
T  9828934 tttaaccaaaatgagtttt-gaacaatgtccctaaagttttgatgataacaatgtataaaagaacaattagata 9829006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 2906594 - 2906526
Alignment:
Q  104 tgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaa 172  Q
    |||| |||| || ||| ||||||||||||||||| ||| |||||||  ||||| |||||||||||||||    
T  2906594 tgggatttacaataatgtctctaaagttttgatgataacaatgtatagaagaataattggatactctaa 2906526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 4698583 - 4698691
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatc 195  Q
    |||||| |||| |||||||| ||| ||| |||||| || ||| ||  | ||| | |||||||||||| ||||||||| |  ||||||||||||||  | |    
T  4698583 aaccaaggtggattttagaataatgtctttaaagtattaatgatagcattgtgtaaaagaacaattgaatactctaatgtatgttcaagtgtgcaaaacc 4698682  T
Q  196 ataaaatta 204  Q
    |||||||||    
T  4698683 ataaaatta 4698691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 17034132 - 17034208
Alignment:
Q  122 ctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcata 198  Q
    |||| ||||||||||| ||| |||||||  |||||||||||||||   |||  | |||||||||||||| |||||||    
T  17034132 ctctgaagttttgatgataacaatgtattgaagaacaattggatatgttaatacatgttcaagtgtgcacgatcata 17034208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 54 - 245
Target Start/End: Original strand, 16748014 - 16748203
Alignment:
Q  54 aaatacataagtttgtaaccatcgaaaaggaggagattttttaaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaa 153  Q
    |||| ||||||||||| | |||  |||||||||| |||  | ||||||| |||||||||||||||| | |||||  |||||||| |||||||||||||||    
T  16748014 aaatccataagtttgttatcataaaaaaggaggaaattgatgaaccaaa-tgggttttagaacaatgtttctaagattttgatgataataatgtatgaaa 16748112  T
Q  154 gaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgactctgaattcaacttgttggttctaaaacacca 245  Q
    ||||| ||| ||||||||| | |||||||| |||| || | |||||||| | ||| ||||| |||| |||| || |||||||| ||||||||    
T  16748113 gaacagttgaatactctaatgtgtgttcaaatgtgtagaaccataaaatcaaattttgact-tgaaatcaatttattggttctgaaacacca 16748203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 96 - 210
Target Start/End: Complemental strand, 24386451 - 24386337
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatc 195  Q
    ||||||||||||||||||||||||||| |||| ||||| ||| |||||||||||||||||||||||   || | ||| | ||||||||||||||| || |    
T  24386451 aaccaaagtgggttttagaacaatatccctaaggtttttatgataataatgtatgaaagaacaatttagtaatttaatgtgtgttcaagtgtgcatgacc 24386352  T
Q  196 ataaaattatattct 210  Q
    ||| ||||| |||||    
T  24386351 atagaattaaattct 24386337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 27483804 - 27483899
Alignment:
Q  115 acaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattct 210  Q
    ||||| ||||| ||||||||||  ||| || || ||||||||||||| ||||   ||| | |||||||||||||||||| |||||||||| |||||    
T  27483804 acaatgtctctgaagttttgatcataacaaagtttgaaagaacaatttgatatattaatgtgtgttcaagtgtgcaggaccataaaattaaattct 27483899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 21538453 - 21538550
Alignment:
Q  117 aatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgact 214  Q
    ||||||| | ||||||||||| ||| ||||||||||||||||||| | |||||||  | |||||||| || | | || |||| ||||| |||||||||    
T  21538453 aatatcttttaagttttgatgataacaatgtatgaaagaacaatttggtactctattgtgtgttcaattgggaaagaccatataattaaattctgact 21538550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 12061302 - 12061203
Alignment:
Q  121 tctctaaagttttgatggtaataatgtatgaaa-gaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgactctgaa 219  Q
    ||||| ||||||||||| |||||| |||||||| |||||||| ||||   ||| | | ||| |||||||||| |||||||| |||  |||||||||||||    
T  12061302 tctctgaagttttgatgataataaagtatgaaaagaacaattagatatgttaatgtgagtttaagtgtgcagaatcataaacttaatttctgactctgaa 12061203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 13897006 - 13896937
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggata 166  Q
    ||||||| ||||||||| |||||| ||||| ||||||||||| ||| || || |||||||| |||||||||    
T  13897006 aaccaaaatgggtttta-aacaatgtctcttaagttttgatgataacaaagtttgaaagaaaaattggata 13896937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 14037623 - 14037554
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggata 166  Q
    ||||||| ||||||||| |||||| ||||| ||||||||||| ||| || || |||||||| |||||||||    
T  14037623 aaccaaaatgggtttta-aacaatgtctcttaagttttgatgataacaaagtttgaaagaaaaattggata 14037554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 18115172 - 18115082
Alignment:
Q  100 aaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgca 190  Q
    |||||||| ||||  ||||| | ||||| ||||||||| ||| || |||| |||||| |||||| |||||||| | ||| |||||||||||    
T  18115172 aaagtggggtttaacacaatttttctaaggttttgatgataacaacgtataaaagaataattgggtactctaatgtgtgctcaagtgtgca 18115082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 214
Target Start/End: Original strand, 22108280 - 22108366
Alignment:
Q  128 agttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgact 214  Q
    |||||||||| ||||||| | ||||||| |||||  ||| | ||| | ||||||||||||||| ||||||| ||||| | |||||||    
T  22108280 agttttgatgataataatatgtgaaagagcaattttatattataatgtgtgttcaagtgtgcatgatcatataattaaaatctgact 22108366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 35511828 - 35511914
Alignment:
Q  99 caaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagt 185  Q
    ||||||| ||||||||||||| | | ||| ||||||||| |||  |||||| |||||| |||| |||||||||| |  |||||||||    
T  35511828 caaagtgagttttagaacaatgtttttaatgttttgatgataacgatgtataaaagaataatttgatactctaatgtatgttcaagt 35511914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 24109118 - 24109151
Alignment:
Q  176 gtgttcaagtgtgcaggatcataaaattatattc 209  Q
    ||||||||||||||||||||||||||||| ||||    
T  24109118 gtgttcaagtgtgcaggatcataaaattaaattc 24109151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 31851192 - 31851285
Alignment:
Q  111 tagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaatta 204  Q
    ||||||||||| ||||| |||||| ||  || | |||||  |||||||||| |||| ||||| |  |||||||||||||| ||||||| |||||    
T  31851192 tagaacaatatttctaaggttttggtgacaacagtgtatagaagaacaattagatattctaaagtttgttcaagtgtgcatgatcatataatta 31851285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 22311211 - 22311287
Alignment:
Q  122 ctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcata 198  Q
    |||||| ||||||||| ||| || ||||  |||||||||||||||  ||||    ||||||||||||||||||||||    
T  22311211 ctctaaggttttgatgataacaaagtattgaagaacaattggatatactaatatttgttcaagtgtgcaggatcata 22311287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 7e-25; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 96 - 246
Target Start/End: Original strand, 11739526 - 11739676
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatc 195  Q
    |||||||  ||||||||||||||| | ||||| ||||||||| ||| ||  ||||||||||||||| | |||||||||  || |||||| |||||| | |    
T  11739526 aaccaaaaagggttttagaacaatgtttctaatgttttgatgataacaacatatgaaagaacaattaggtactctaacatgtattcaagcgtgcagtacc 11739625  T
Q  196 ataaaattatattctgactctgaattcaacttgttggttctaaaacaccaa 246  Q
    ||| ||||| |||||||||| ||| || ||||||||||||| |||||||||    
T  11739626 atagaattaaattctgactcagaagtctacttgttggttctgaaacaccaa 11739676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 39199758 - 39199872
Alignment:
Q  101 aagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaa--cgcgtgttcaagtgtgcaggatcata 198  Q
    ||||| ||||||||| ||||||||||| ||||||||  ||| |||||||||| |||||||| ||||||||||   ||||||| |||| |||| || ||||    
T  39199758 aagtgagttttagaataatatctctaaggttttgataataacaatgtatgaatgaacaatttgatactctaatgtgcgtgtttaagtatgcatgaccata 39199857  T
Q  199 aaattatattctgac 213  Q
     ||||| ||||||||    
T  39199858 taattaaattctgac 39199872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 23662375 - 23662258
Alignment:
Q  107 gttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattata 206  Q
    ||||||||| ||| ||||||| ||||||||| | | ||||||| ||||||||||||||||| ||||    ||||  ||| ||||||| |||| ||||| |    
T  23662375 gttttagaataatgtctctaaggttttgatgctgacaatgtataaaagaacaattggataccctaaattttgttgtagtatgcaggaacatagaattaca 23662276  T
Q  207 ttctgactctgaattcaa 224  Q
    ||||||||||||| ||||    
T  23662275 ttctgactctgaagtcaa 23662258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 3316186 - 3316119
Alignment:
Q  104 tgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactcta 171  Q
    ||||||||||||||| |||||||| ||||||||| ||| |||||||  |||||||||||| |||||||    
T  3316186 tgggttttagaacaaaatctctaatgttttgatgataaaaatgtatagaagaacaattgggtactcta 3316119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 6414996 - 6414881
Alignment:
Q  99 caaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcata 198  Q
    ||||||||||| ||||||||| ||| |||| |||| ||| ||| |||||||||||||| |||||| ||||||||   |  |||||||||||||||  |||    
T  6414996 caaagtgggttatagaacaatgtctttaaattttttatgataacaatgtatgaaagaataattgggtactctaatatgcattcaagtgtgcaggacgata 6414897  T
Q  199 aaattatattctgact 214  Q
     ||||| ||| |||||    
T  6414896 taattaaattatgact 6414881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 214
Target Start/End: Complemental strand, 23183554 - 23183444
Alignment:
Q  104 tgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaatt 203  Q
    |||||||| | ||||| ||||| ||||| ||||| ||||||| |||||||||||||   || ||||||| | ||||||||||||||| || |||| ||||    
T  23183554 tgggtttttggacaatgtctcttaagttctgatgataataatttatgaaagaacaacctgacactctaatgtgtgttcaagtgtgcatgaccatataatt 23183455  T
Q  204 atattctgact 214  Q
    | ||| |||||    
T  23183454 aaattttgact 23183444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 7681513 - 7681578
Alignment:
Q  104 tgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactc 169  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||||  |||||||| ||| |||||    
T  7681513 tgggttttagaacaatatctctaaggttttgatgataacaatgtatagaagaacaactgggtactc 7681578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 23655574 - 23655457
Alignment:
Q  107 gttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattata 206  Q
    ||||||||| ||| ||||||| ||||||||| |||  ||||||  ||||| |||||| |||||||| |  |||||  ||||| |||| |||| ||||| |    
T  23655574 gttttagaataatgtctctaaggttttgatgttaactatgtatataagaaaaattgggtactctaaagtttgttctggtgtgtaggaccatataattaaa 23655475  T
Q  207 ttctgactctgaattcaa 224  Q
    ||||||||||||| ||||    
T  23655474 ttctgactctgaagtcaa 23655457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 7666254 - 7666319
Alignment:
Q  104 tgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactc 169  Q
    ||||||||||||||||||||||||  |||||||| ||| |||||||  |||||||| ||| |||||    
T  7666254 tgggttttagaacaatatctctaagtttttgatgataacaatgtatagaagaacaactgggtactc 7666319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 19650781 - 19650724
Alignment:
Q  131 tttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtg 188  Q
    ||||||| ||||||||||||||| || |||||| ||| |||| |||||||||||||||    
T  19650781 tttgatgataataatgtatgaaataaaaattgggtaccctaatgcgtgttcaagtgtg 19650724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 7144564 - 7144683
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatc 195  Q
    ||||||| || |||||| ||||||  |||| |||||||||||  || ||| ||||||||||||||||||||    || | |||||||||| ||||| | |    
T  7144564 aaccaaaatgagtttta-aacaatgactctgaagttttgatgagaacaatatatgaaagaacaattggatatgacaatgtgtgttcaagtatgcagaacc 7144662  T
Q  196 ataaaattatattctgactct 216  Q
    ||| ||||| |||||||||||    
T  7144663 atataattaaattctgactct 7144683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 32561883 - 32561988
Alignment:
Q  107 gttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattata 206  Q
    ||||||||||||| ||||||| ||||||||| |||| |||||||||| || ||||  ||||||||| |  |||| |||| || |||| |||| ||||| |    
T  32561883 gttttagaacaatgtctctaaggttttgatgataat-atgtatgaaa-aataatttaatactctaatgtatgtttaagtatgtaggaccatataattaaa 32561980  T
Q  207 ttctgact 214  Q
    ||||||||    
T  32561981 ttctgact 32561988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 1675008 - 1675102
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgca 190  Q
    |||||||||| ||||||||| |||    ||||  |||||||| |||||||||||  ||||||||||||||| ||||  |  ||||||||||||||    
T  1675008 aaccaaagtgagttttagaataatgctactaagattttgatgataataatgtatagaagaacaattggatattctattgtttgttcaagtgtgca 1675102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 1783447 - 1783369
Alignment:
Q  122 ctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaa 200  Q
    ||||| |||||||||| ||| || || |  ||||||||||||||| | |||   |||||||||||||||||||||||||    
T  1783447 ctctagagttttgatgataacaaagttttgaagaacaattggataatttaatatgtgttcaagtgtgcaggatcataaa 1783369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 4122590 - 4122671
Alignment:
Q  111 tagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcagg 192  Q
    |||||||||||||||||  |||| ||| ||| ||||||  ||||||||||||  |||  ||||| |||||| ||||||||||    
T  4122590 tagaacaatatctctaagattttaatgataacaatgtagaaaagaacaattgagtacaataacgtgtgttccagtgtgcagg 4122671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 39227386 - 39227475
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagt 185  Q
    ||||||||| | |||||||| ||| | ||||| ||||||| | ||| ||| ||||||||||||  | |||||||||| | ||||||||||    
T  39227386 aaccaaagtcgattttagaataatgtttctaaggttttgaagataacaatatatgaaagaacagattgatactctaaagtgtgttcaagt 39227475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 254
Target Start/End: Original strand, 35150106 - 35150261
Alignment:
Q  99 caaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcata 198  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||||||  |||| ||  | ||||||||| |||||  | ||||    
T  35150106 caaagtgagttttagaacaatgtctctaaagttttgatgataacaatgtatgaaataacaattgagtactttagtgtgtgttcaagggtgcaataccata 35150205  T
Q  199 aaattatattctgactctgaattcaacttgttggttctaaaacaccaagctttgaa 254  Q
    ||| || |||||||||   || |||| ||||||||||| ||||| |||||| ||||    
T  35150206 aaactaaattctgacttcaaagtcaagttgttggttctgaaacatcaagctctgaa 35150261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 24715650 - 24715758
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatc 195  Q
    ||||||||||||||||| | |||| ||| |||  |||||||| ||| ||| ||||||||||||||||| |||||||| | |||||||| |||||| || |    
T  24715650 aaccaaagtgggttttacatcaatgtctttaagattttgatgataacaatttatgaaagaacaattgggtactctaatgtgtgttcaattgtgcaagacc 24715749  T
Q  196 ataaaatta 204  Q
    ||| |||||    
T  24715750 atacaatta 24715758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 12285764 - 12285854
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtg 186  Q
    ||||||||||| ||||| |||||| ||| |||| |||||||| ||| |||||| |||||||||||||| |||||||| | || ||||||||    
T  12285764 aaccaaagtggattttaaaacaatgtctataaaattttgatgataacaatgtaagaaagaacaattgggtactctaatgtgttttcaagtg 12285854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 9736527 - 9736410
Alignment:
Q  108 ttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatat 207  Q
    |||||||||||| |||||| |||||||||| ||| ||||||||||||||||||| | ||  |||| |  |||||||| |  ||||| |||| |||||  |    
T  9736527 ttttagaacaatgtctctacagttttgatgataaaaatgtatgaaagaacaattaggtagcctaaagtttgttcaaggggtcaggaccatagaattaagt 9736428  T
Q  208 tctgactctgaattcaac 225  Q
    ||| ||||||||||||||    
T  9736427 tctaactctgaattcaac 9736410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 9883032 - 9883107
Alignment:
Q  129 gttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaatta 204  Q
    ||||||||||||| |||||||||||||||||||| |||||||||   ||||| |||||||||  | ||||||||||    
T  9883032 gttttgatggtaaaaatgtatgaaagaacaattgaatactctaatttgtgtttaagtgtgcactaccataaaatta 9883107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 249
Target Start/End: Original strand, 19601508 - 19601627
Alignment:
Q  130 ttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgactctgaattcaacttgt 229  Q
    |||||||| |||||||||||||| ||| |||||  || | ||||  || ||||||| |||||||||||| ||||| ||||||| | | || |||| || |    
T  19601508 ttttgatgataataatgtatgaatgaataattgagtattgtaacatgtattcaagtatgcaggatcatataattaaattctgaatttaaaatcaagtttt 19601607  T
Q  230 tggttctaaaacaccaagct 249  Q
    ||||||||| ||| ||||||    
T  19601608 tggttctaatacatcaagct 19601627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 20748743 - 20748672
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatac 167  Q
    ||||||||||||| |||||||||| ||| ||| | |  |||| ||| |||||||||||||||||||||||||    
T  20748743 aaccaaagtgggtattagaacaatgtctataaggatacgatgataacaatgtatgaaagaacaattggatac 20748672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 7221347 - 7221262
Alignment:
Q  104 tgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgca 190  Q
    ||||||||| || ||||| ||||| ||||||||| ||| ||| ||| ||| |||||||||||||||||| |  ||||||||||||||    
T  7221347 tgggttttaaaataatatttctaaggttttgatgataaaaat-tataaaataacaattggatactctaaagtttgttcaagtgtgca 7221262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 23693038 - 23692967
Alignment:
Q  143 aatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgact 214  Q
    ||||||||||| ||||||||| |||||||| | ||||||||| | ||| || |||| ||||| |||||||||    
T  23693038 aatgtatgaaataacaattgggtactctaatgtgtgttcaagcgagcaagaccatataattaaattctgact 23692967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 16300692 - 16300733
Alignment:
Q  104 tgggttttagaacaatatctctaaagttttgatggtaataat 145  Q
    |||||||||||||||| ||| ||||||||||||| |||||||    
T  16300692 tgggttttagaacaatgtctttaaagttttgatgataataat 16300733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 136
Target Start/End: Complemental strand, 7224311 - 7224279
Alignment:
Q  104 tgggttttagaacaatatctctaaagttttgat 136  Q
    |||||||||||||||||||||||| ||||||||    
T  7224311 tgggttttagaacaatatctctaaggttttgat 7224279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 35150323 - 35150387
Alignment:
Q  295 atgatatgaagaaagttcaac-aaaattcaaagctctaattagaagatgcatcaagccttgaaga 358  Q
    ||||||||||||||| ||||| |||| | |||| ||| ||||||||||||||||| | |||||||    
T  35150323 atgatatgaagaaaggtcaacaaaaaattaaagttctgattagaagatgcatcaaactttgaaga 35150387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 129 - 382
Target Start/End: Original strand, 12869801 - 12870064
Alignment:
Q  129 gttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgactctgaattcaacttg 228  Q
    ||||||||  ||| |||||||||||||| || | | ||||| || | |||||||  ||||||||| |||| ||||| ||||||| |||||  ||||||||    
T  12869801 gttttgattataacaatgtatgaaagaataactaggtactcaaatgagtgttcagatgtgcaggaccatataattaaattctgaatctgatgtcaacttg 12869900  T
Q  229 ttggttctaaaacaccaagcttt----------gaatgcatttggtaatcaagaagaagctatgatgactaaaactatgatatgaagaaagttcaacaaa 318  Q
    |||||||| | ||||||| || |          ||| |||||||||| |||||| ||| || | | ||||   |||||||| ||||||||| |||| |||    
T  12869901 ttggttctgagacaccaaactctaaacgcaaaagaacgcatttggtactcaaga-gaatctctaaggactttgactatgatctgaagaaaggtcaataaa 12869999  T
Q  319 at-tcaaagctctaattagaagatgcatcaagccttgaagattatgatgaaagcagactctaatg 382  Q
    || |||||| ||||||||||||||||||||||||||||||  | |||||||| || |||||||||    
T  12870000 atgtcaaagttctaattagaagatgcatcaagccttgaaggctttgatgaaaacatactctaatg 12870064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 14761378 - 14761285
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgca 190  Q
    ||||| |||||||||||||||||| |||||||| |||||||| ||| ||||||||||| | ||||| | |||| ||||| |||||||||||||||    
T  14761378 aaccatagtgggttttagaacaatgtctctaaaattttgatgataacaatgtatgaaa-agcaatttggtactataacgtgtgttcaagtgtgca 14761285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 356
Target Start/End: Complemental strand, 33546652 - 33546463
Alignment:
Q  176 gtgttcaagtgtgcaggatcataaaattatattctgactctgaattcaacttgttggttctaaaacaccaagct----------ttgaatgcatttggta 265  Q
    |||||||||| ||||||| |||  ||||| ||| ||| |||||| |||||||||||||||| ||| ||||||||          ||||||||||||| ||    
T  33546652 gtgttcaagtctgcaggaccattgaattaaattttgattctgaagtcaacttgttggttctgaaataccaagctctaaacacaattgaatgcatttgata 33546553  T
Q  266 atcaagaagaagctatgatgactaaaactatgatatgaagaaagttcaacaaaattcaaagctctaattagaagatgcatcaagccttgaa 356  Q
     |||| |||||||| |||||  | || | ||||    ||||||| | ||||||||| |||||||| || ||||||||||| ||||||||||    
T  33546552 ctcaaaaagaagctctgatg-gtgaagcaatgaacccaagaaaggtaaacaaaatttaaagctctgatcagaagatgcattaagccttgaa 33546463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 24558953 - 24559019
Alignment:
Q  93 tttaaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaa 159  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||    
T  24558953 tttaaccaaagtgggttttagaacaatgtctttaaggttttgatgataataatgtatgaaagaacaa 24559019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 24599985 - 24600051
Alignment:
Q  93 tttaaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaa 159  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||    
T  24599985 tttaaccaaagtgggttttagaacaatgtctttaaggttttgatgataataatgtatgaaagaacaa 24600051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 11848263 - 11848353
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtg 186  Q
    ||||||||||||||||| |||||| ||||||| ||||||||| ||| | ||||||||||||||||| | || | ||| | |||||||||||    
T  11848263 aaccaaagtgggttttacaacaatgtctctaaggttttgatgataacattgtatgaaagaacaatttggtattataatgtgtgttcaagtg 11848353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 360
Target Start/End: Original strand, 15990752 - 15990843
Alignment:
Q  269 aagaagaagctatgatgactaaaactatgatatgaagaaagttcaacaaaattcaaagctctaattagaagatgcatcaagccttgaagatt 360  Q
    ||||| ||||||||||||||| ||||||||| ||| |||||  |||||||| |||||  | | || | ||||||||||||||||||||||||    
T  15990752 aagaaaaagctatgatgactagaactatgatctgatgaaaggccaacaaaagtcaaatatttgataaaaagatgcatcaagccttgaagatt 15990843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 18807535 - 18807449
Alignment:
Q  130 ttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgactct 216  Q
    |||||||| ||| ||  ||| ||| ||||||||||||  |||| | ||||||||||||| ||||||||||||||| ||||| |||||    
T  18807535 ttttgatgataacaaaatatcaaaaaacaattggatatgctaaggtgtgttcaagtgtgaaggatcataaaattaaattctaactct 18807449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 17771693 - 17771794
Alignment:
Q  146 gtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgactctgaattcaacttgttggttctaaaacacca 245  Q
    |||||||||||||||| |||||||||| | || |||||||||  | | | ||| ||||| ||| ||||| |||| ||||||| |||||| | ||||||||    
T  17771693 gtatgaaagaacaattagatactctaatgtgtattcaagtgtctaagtttatataattaaattatgactttgaagtcaacttattggttttgaaacacca 17771792  T
Q  246 ag 247  Q
    ||    
T  17771793 ag 17771794  T

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Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 16687129 - 16687198
Alignment:
Q  145 tgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatcataaaattatattctgact 214  Q
    |||||||||||| |||||| |||||||| | ||||| ||||||||| || |||| ||||| ||| |||||    
T  16687129 tgtatgaaagaataattgggtactctaatgtgtgtttaagtgtgcaagaccatagaattaaattatgact 16687198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 16686436 - 16686480
Alignment:
Q  108 ttttagaacaatatctctaaagttttgatggtaataatgtatgaa 152  Q
    ||||| |||||||||| ||||||||||||| ||||||| ||||||    
T  16686436 ttttaaaacaatatctttaaagttttgatgataataatatatgaa 16686480  T

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Target: scaffold0466 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 4317 - 4425
Alignment:
Q  96 aaccaaagtgggttttagaacaatatctctaaagttttgatggtaataatgtatgaaagaacaattggatactctaacgcgtgttcaagtgtgcaggatc 195  Q
    |||||||||||||||||||||||| ||| ||   || ||||| ||| || |||| ||| |||||||||||||||||| |  ||||| ||||||||||| |    
T  4317 aaccaaagtgggttttagaacaatgtctatatgattctgatgttaacaaagtataaaataacaattggatactctaatgtatgttcgagtgtgcaggacc 4416  T
Q  196 ataaaatta 204  Q
    ||| |||||    
T  4417 atataatta 4425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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