View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8186_high_17 (Length: 379)
Name: NF8186_high_17
Description: NF8186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8186_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 28 - 364
Target Start/End: Original strand, 34334723 - 34335059
Alignment:
| Q |
28 |
gcccgaaaacaaaatggcaaatggcagacttgcctgcaagccaaaagaataaagctagacatataagacaatagtccctaccctaaaccagaaaacagga |
127 |
Q |
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| T |
34334723 |
gcccgaaaacaaaatggcaaaaggcagacttgcctgcaagccaaaagaataaagctagacatataagacaacagtccctaccctaaaccagaaaacagga |
34334822 |
T |
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| Q |
128 |
ccaaagcataaaaatccacaaacaataacagcaagctaaaatttcagaggccaaagaccatacataaaaggccacagaagctactattcttgtttctttc |
227 |
Q |
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| T |
34334823 |
ccaaagcataaaaatccacaaacaataacagcaagctaaaatttcagaggccaaagaccatacataaaaggccacagaagctactattcttgtttctttc |
34334922 |
T |
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| Q |
228 |
acatggccagttccttcgtgataagtttgtaaatcatccctgcctaaagcacatgttagacataatatttgaactttagagtttaggaataccatgtcag |
327 |
Q |
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||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34334923 |
acatgactagttccttcgtgataagtttgtaaatcatccctgcctaaagcacatgttagacataatatttgaactttagagtttaggaataccatgtcag |
34335022 |
T |
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| Q |
328 |
attcgtctttggtctagtcttcttcgaattgcttctt |
364 |
Q |
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||| ||||||||||||||||||||||||||||||||| |
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| T |
34335023 |
atttgtctttggtctagtcttcttcgaattgcttctt |
34335059 |
T |
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