View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8186_high_26 (Length: 343)
Name: NF8186_high_26
Description: NF8186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8186_high_26 |
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Alignment Details
Target: chr2 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 8483876 - 8483544
Alignment:
| Q |
1 |
tacaagatatattagctttattctaacttaagttttgtaattgggtcgtgatttgaacgttatannnnnnn-atatgactatatatatactagtgaaata |
99 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
8483876 |
tacaagatatattagctttattctaacttaagttttgtaattgggtcgtgatttgaacgttatattttttttatatgactatatatatactagtgaaata |
8483777 |
T |
|
| Q |
100 |
atttagcaagctttcttacttgcactcccaaacactcctcagtggggtaagcctgcttacctcactccccctctcttttctatcattccttcacaagctg |
199 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8483776 |
ctttagcaacctttcttacttgcactcccaaacactcctcagtggggtaagcctgcttacctcactccccctctcttttctatcattccttcacaagctg |
8483677 |
T |
|
| Q |
200 |
tggctttgcttcttggcaatgtcatacatacttgcttcttcacgctatgcc-ttttgctttccccccacacttctgttcctctccaactatatgctcaaa |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8483676 |
tggctttgcttcttggcaatgtcatacatacttgcttcttcacgctatgcctttttgctttccccccacacttctgttcctctccaactatatgctcaaa |
8483577 |
T |
|
| Q |
299 |
taatgtttaccatctatcttcttgctaatgatg |
331 |
Q |
| |
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||||||||||||||||||||||||||||||||| |
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| T |
8483576 |
taatgtttaccatctatcttcttgctaatgatg |
8483544 |
T |
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