View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8186_high_31 (Length: 309)
Name: NF8186_high_31
Description: NF8186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8186_high_31 |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 1549961 - 1549745
Alignment:
| Q |
11 |
acatcagaaagaattccatagagtggtttagccaccataggaagattagcagaatactgtacaagttgcaatattgaagggtccaaattgagattactag |
110 |
Q |
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| T |
1549961 |
acatcagaaagaattccatagagtggtttagccaccataggaagattagcagaatactgtacaagttgcaatattgaagggtccaaattgagattactag |
1549862 |
T |
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| Q |
111 |
ccatatgaaaattaagagcaagccaaggaaaacatctaaacccttgtaaccaataaccaaatccacacaatataagcatttgtttccctccaattagact |
210 |
Q |
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| T |
1549861 |
ccatatgaaaattaagagcaagccaaggaaaacatctaaacccttgtaaccaataaccaaatccacacaatataagcatttgtttccctccaattacact |
1549762 |
T |
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| Q |
211 |
agtacttgaacttgaac |
227 |
Q |
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||||||||||||||||| |
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| T |
1549761 |
agtacttgaacttgaac |
1549745 |
T |
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