View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8186_high_44 (Length: 272)
Name: NF8186_high_44
Description: NF8186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8186_high_44 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 7 - 272
Target Start/End: Complemental strand, 5457863 - 5457598
Alignment:
| Q |
7 |
ttatgatctttatttattttgatacaaatatcttttgagttgcttctcaattacgctaacatataaatatatcacttctaggaaattcgtctttattagg |
106 |
Q |
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| T |
5457863 |
ttatgatctttatttattttgatacaaatatcttttgagttgcttctcaattacgctaacatataaatatatcacttctaggaaattcgtctttattagg |
5457764 |
T |
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| Q |
107 |
ttaaactgcccgagttccttctcaattttgccaatataaaaagattccctctcacatagtttcctctcacttttccaccacaaaccctaaaaatttcaat |
206 |
Q |
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|||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5457763 |
ttaaacagctcgagttccttctcaatttcgccaatataaaaagattccctctcacatagtttcctctcacttttccaccacaaaccctaaaaatttcaat |
5457664 |
T |
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| Q |
207 |
tcagatcatttttacannnnnnncactaaaacgaacaaattccctctaaccaatcgattcgtcttc |
272 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5457663 |
tcagatcatttttacatttttttcactaaaacgaacaaattccctctaaccaatcgattcgtcttc |
5457598 |
T |
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