View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8186_low_37 (Length: 334)
Name: NF8186_low_37
Description: NF8186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8186_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 16 - 317
Target Start/End: Original strand, 39488399 - 39488701
Alignment:
| Q |
16 |
ctaatgcccaagc-actcaactctttagtctatctctatggaccatctggaaaatgcggaatgacgcagtgttcaacaagcgactacttaatgtggtgtg |
114 |
Q |
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||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
39488399 |
ctaatgcccaagctactcaactctttagtctatttctatggaccatctggaaaatgcggaatgacgcagtgttcaacaagcgaccacttaatgtggtgtg |
39488498 |
T |
|
| Q |
115 |
tgccgcccaaaatgtatctattatggctgatgagtttaacttagcttgtaatctgttttttgagtctgatgagatgcatgaaaccataaatgttgggagt |
214 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39488499 |
tgccgcccaaaatgtctctattatggctgatgagtttaacttagcttgtaatctgttttttgagtctgatgagatgcatgaaaccataaatgttgggagt |
39488598 |
T |
|
| Q |
215 |
gatacttggttaccggcgcaagcgggttttgttaaggtgaacattgatgctggctgttttaaagataactacacgtgttggggtttaataagtagggacc |
314 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
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| T |
39488599 |
gatacttggttaccggcgcaagcgggttctgttaaggtgaacattgatgctggctgttttaaagataactacacttgttggggtttaatcagtagggacc |
39488698 |
T |
|
| Q |
315 |
atg |
317 |
Q |
| |
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||| |
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| T |
39488699 |
atg |
39488701 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 16 - 317
Target Start/End: Original strand, 46034521 - 46034823
Alignment:
| Q |
16 |
ctaatgcccaagc-actcaactctttagtctatctctatggaccatctggaaaatgcggaatgacgcagtgttcaacaagcgactacttaatgtggtgtg |
114 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
46034521 |
ctaatgcccaagctactcaactctttagtctatctctatggaccatctggaaaatgcggaatgacgcagtgttcaacaagcgaccacttaatgtggtgtg |
46034620 |
T |
|
| Q |
115 |
tgccgcccaaaatgtatctattatggctgatgagtttaacttagcttgtaatctgttttttgagtctgatgagatgcatgaaaccataaatgttgggagt |
214 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46034621 |
tgccgcccaaaatgtctctattatggctgatgagtttaacttagcttgtaatctgttttttgagtctgatgagatgcatgaaaccataaatgttgggagt |
46034720 |
T |
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| Q |
215 |
gatacttggttaccggcgcaagcgggttttgttaaggtgaacattgatgctggctgttttaaagataactacacgtgttggggtttaataagtagggacc |
314 |
Q |
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|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
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| T |
46034721 |
gatacttggttaccggcgcaagcgggttctgttaaggtggacattgatgctggctgttttaaagataactacacttgttggggtttaatcagtagggacc |
46034820 |
T |
|
| Q |
315 |
atg |
317 |
Q |
| |
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||| |
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|
| T |
46034821 |
atg |
46034823 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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